Csor.00g191640 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGCTGCCAATCTCTTTGCTCCGCCCATGGCTTCCGTCCATGTCGCCACCGGATCGCGTCGCTCCTCTGCTAGTTTCTACGACATCCTCCGCGTCAAGAACAACGCTTCCTCTGTTGAAATCAAGACTGCCTACCGGAGTTTAGCGAAGATTTACCATCCGGACTCGGCGAGGAAATCGGACTGCGATTCCTTTTCTTCTGATGATGGATGCAGTTTCCTTGAGATTCACAATGCGTACGAGACGCTTTCGGACCCTGCTACTCGGGCTCATTACGATCTTGCTTTGGCTGCTCTCACTAGACGGGCGTTTCTTCGATCGCGGTCTAGGCCGCATCGGCGGTGGGAAACGGATCAGTGTTGGTAG ATGTCTGCTGCCAATCTCTTTGCTCCGCCCATGGCTTCCGTCCATGTCGCCACCGGATCGCGTCGCTCCTCTGCTAGTTTCTACGACATCCTCCGCGTCAAGAACAACGCTTCCTCTGTTGAAATCAAGACTGCCTACCGGAGTTTAGCGAAGATTTACCATCCGGACTCGGCGAGGAAATCGGACTGCGATTCCTTTTCTTCTGATGATGGATGCAGTTTCCTTGAGATTCACAATGCGTACGAGACGCTTTCGGACCCTGCTACTCGGGCTCATTACGATCTTGCTTTGGCTGCTCTCACTAGACGGGCGTTTCTTCGATCGCGGTCTAGGCCGCATCGGCGGTGGGAAACGGATCAGTGTTGGTAG ATGTCTGCTGCCAATCTCTTTGCTCCGCCCATGGCTTCCGTCCATGTCGCCACCGGATCGCGTCGCTCCTCTGCTAGTTTCTACGACATCCTCCGCGTCAAGAACAACGCTTCCTCTGTTGAAATCAAGACTGCCTACCGGAGTTTAGCGAAGATTTACCATCCGGACTCGGCGAGGAAATCGGACTGCGATTCCTTTTCTTCTGATGATGGATGCAGTTTCCTTGAGATTCACAATGCGTACGAGACGCTTTCGGACCCTGCTACTCGGGCTCATTACGATCTTGCTTTGGCTGCTCTCACTAGACGGGCGTTTCTTCGATCGCGGTCTAGGCCGCATCGGCGGTGGGAAACGGATCAGTGTTGGTAG MSAANLFAPPMASVHVATGSRRSSASFYDILRVKNNASSVEIKTAYRSLAKIYHPDSARKSDCDSFSSDDGCSFLEIHNAYETLSDPATRAHYDLALAALTRRAFLRSRSRPHRRWETDQCW Homology
BLAST of Csor.00g191640 vs. ExPASy Swiss-Prot
Match: Q9FYB5 (Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ11 PE=1 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 1.6e-13 Identity = 50/108 (46.30%), Postives = 60/108 (55.56%), Query Frame = 0
BLAST of Csor.00g191640 vs. ExPASy Swiss-Prot
Match: Q9KD71 (Chaperone protein DnaJ OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=dnaJ PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.4e-09 Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 0
BLAST of Csor.00g191640 vs. ExPASy Swiss-Prot
Match: O66921 (Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=dnaJ2 PE=3 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.2e-09 Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 0
BLAST of Csor.00g191640 vs. ExPASy Swiss-Prot
Match: Q5WHG0 (Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16) OX=66692 GN=dnaJ PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 4.1e-09 Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 0
BLAST of Csor.00g191640 vs. ExPASy Swiss-Prot
Match: P17631 (Chaperone protein DnaJ OS=Bacillus subtilis (strain 168) OX=224308 GN=dnaJ PE=2 SV=3) HSP 1 Score: 62.4 bits (150), Expect = 4.1e-09 Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 0
BLAST of Csor.00g191640 vs. NCBI nr
Match: XP_022940753.1 (chaperone protein dnaJ 11, chloroplastic-like [Cucurbita moschata] >KAG6607725.1 Chaperone protein dnaJ 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037299.1 Chaperone protein dnaJ 11, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 244 bits (622), Expect = 2.95e-81 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Csor.00g191640 vs. NCBI nr
Match: XP_023525212.1 (chaperone protein dnaJ 11, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 243 bits (619), Expect = 8.46e-81 Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Csor.00g191640 vs. NCBI nr
Match: XP_022981701.1 (chaperone protein dnaJ 11, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 234 bits (598), Expect = 1.35e-77 Identity = 116/122 (95.08%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Csor.00g191640 vs. NCBI nr
Match: XP_023536215.1 (chaperone protein dnaJ 11, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 206 bits (525), Expect = 2.09e-66 Identity = 103/126 (81.75%), Postives = 111/126 (88.10%), Query Frame = 0
BLAST of Csor.00g191640 vs. NCBI nr
Match: XP_022936967.1 (chaperone protein dnaJ 11, chloroplastic-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 201 bits (512), Expect = 2.01e-64 Identity = 102/126 (80.95%), Postives = 111/126 (88.10%), Query Frame = 0
BLAST of Csor.00g191640 vs. ExPASy TrEMBL
Match: A0A6J1FQ67 (chaperone protein dnaJ 11, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111446259 PE=4 SV=1) HSP 1 Score: 244 bits (622), Expect = 1.43e-81 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Csor.00g191640 vs. ExPASy TrEMBL
Match: A0A6J1IXA4 (chaperone protein dnaJ 11, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480764 PE=4 SV=1) HSP 1 Score: 234 bits (598), Expect = 6.55e-78 Identity = 116/122 (95.08%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Csor.00g191640 vs. ExPASy TrEMBL
Match: A0A6J1F9T8 (chaperone protein dnaJ 11, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443399 PE=4 SV=1) HSP 1 Score: 201 bits (512), Expect = 9.72e-65 Identity = 102/126 (80.95%), Postives = 111/126 (88.10%), Query Frame = 0
BLAST of Csor.00g191640 vs. ExPASy TrEMBL
Match: A0A6J1FEQ6 (chaperone protein dnaJ 11, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443399 PE=4 SV=1) HSP 1 Score: 194 bits (492), Expect = 1.02e-61 Identity = 100/124 (80.65%), Postives = 109/124 (87.90%), Query Frame = 0
BLAST of Csor.00g191640 vs. ExPASy TrEMBL
Match: A0A5D3DHW9 (Chaperone protein dnaJ 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G002580 PE=4 SV=1) HSP 1 Score: 182 bits (462), Expect = 3.24e-57 Identity = 98/124 (79.03%), Postives = 103/124 (83.06%), Query Frame = 0
BLAST of Csor.00g191640 vs. TAIR 10
Match: AT3G13310.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 97.8 bits (242), Expect = 6.3e-21 Identity = 60/127 (47.24%), Postives = 70/127 (55.12%), Query Frame = 0
BLAST of Csor.00g191640 vs. TAIR 10
Match: AT2G17880.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 84.0 bits (206), Expect = 9.4e-17 Identity = 54/107 (50.47%), Postives = 66/107 (61.68%), Query Frame = 0
BLAST of Csor.00g191640 vs. TAIR 10
Match: AT4G36040.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14 Identity = 50/108 (46.30%), Postives = 60/108 (55.56%), Query Frame = 0
BLAST of Csor.00g191640 vs. TAIR 10
Match: AT4G39960.1 (Molecular chaperone Hsp40/DnaJ family protein ) HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09 Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = 0
BLAST of Csor.00g191640 vs. TAIR 10
Match: AT2G22360.1 (DNAJ heat shock family protein ) HSP 1 Score: 58.5 bits (140), Expect = 4.2e-09 Identity = 34/79 (43.04%), Postives = 44/79 (55.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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