Csor.00g190630 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g190630
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr01: 9734029 .. 9735639 (-)
RNA-Seq ExpressionCsor.00g190630
SyntenyCsor.00g190630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCGTCTTCCCATGCTCCCCCGACCCTTCCGATATTAAATGTTATCTTATGCTATCTAGCAACAATACTGTATGTATTGTGAGATCCATCACAATACATACATCGGTTAACATCGGTTAACATCGGTTGGGATAGAAATGAAACATTATTTATAAAAATGTGAAAACTTCTTCCTTGTAGATGTATTTTAAAAACCTTGAGGGAAATCTTCAAAGAAGACTACGCGGCTAACGATGAGCTTGAGTTGTTACATGTATTATGATTAAAGGTTAGATGATTGAGTTGCTTCATCTTCACATATTTGTTGAAGAAAGATTGACGAGTTTATTGAATATATTAAACATAGAAAAAAAAAGATGGACGAGTTTATTGAATATATTATATTGGAGTCGCATATGAAAATATAAAATTGCGAGGATTAACATATGGAGAAGGCTCGCAAACATGAGGGATTACTCCTACTACTGCCTCTAAGAAGAGTTTTGAGGCCAAAAGATCTGTTTAGTTCAAACAACAAGTGGAGAAGCCTTCTTTAATGTTGAGATTTTGGGGAGTTGACAACAAAAAAGAAGAGACATATTTAACTGATAGTCTGATACTCTGGTAACACAATCTACATCTACAAACTCTATGTTGTTGAATGCTCCAACTGCCAAAAACGTCAAAACTAAGTTCTTTTTACAAATGAATGAAGAAGGGTGAATGAAAAATAAAAGTCAAAAGTCTAAGTCTAAGTGCATTCTGAGCACATTGTGGCAATTCATGGAGCTTCTTCTTCTTACTGCTACATATCTTGCCTATGACCAAAAGGAGCCTAACAATTATGAAGGCTGGGCACCTTTTCAGCTGATTAACCTATGGACTCTCCTCGTCTGAACTTGAGTCACTGATCCTACGATCAGTAATTGCTGGGAAGATCAGTTGATTCAGATCGGCAGAAGGTGTGTGTCGTAGATCAGGGGGGCGAACAGGGGGAAGAGCAGCGGGAACTGGAGTTGAAGGGGGAGGAGGAGCAGAGGGAGCTGGAGTTGAAGGGGGAGGCGGAGCAGAGGGAGCTGGAGTTGAAGGGGGAGGCGGAGCAGAGGGAGCTGGAGTTGAAGGGGGAGGCGGGGCAGAGGGAGCTAGAGTTGAAGGGGGAGGAGGAGCAGAGGGAGATGGAGTTGAAGGGGGAGGAGGAGCGAGGGAGCTGGAGTTGAAGGGGGAGGCGGAGCAGAGGGAGATGGAGTTGAAGGGGGAGGAGGAGCAGAAGGAGCTGGAGTTGAAGGGGGAGGCGGAGCAGAGGGAGCTGGAGTTGAAGGGGGAGGCGGAGCAGAGGGAGCTGGAGTTGAAGGGGGAGGAGGGGGCAGAGGGAGCTAGAGTTGAAGGGGGAGGAGGGGCAGAGGGAGCTGGAGTTGAAGGGGGAGGAGGAGCAGAGGGAACTGGAGTTGAAGGGGGAAGATCAGCAGGAGGTACGGGGGGACGATCAGGGGTCGATCAGAGGGAACTGGTGTTGAAGGGGGAAGATCAGCAGGAGGAACGGGGGGACGATCAGCGGGAAGATCAGCGGCAGGAACAGGGGGAAGATCAGCAGGAGGAATCAGAGGGAACTGGAGTTGAAGGGGGGTGA

mRNA sequence

ATGGCTGCGTCTTCCCATGCTCCCCCGACCCTTCCGATATTAAATGTTATCTTATGCTATCTAGCAACAATACTATCGGCAGAAGGTGTGTGTCGTAGATCAGGGGGGCGAACAGGGGGAAGAGCAGCGGGAACTGGAGTTGAAGGGGGAGGAGGAGCAGAGGGAGCTGGAGTTGAAGGGGGAGGCGGAGCAGAGGGAGCTGGAGTTGAAGGGGGAGGCGGAGCAGAGGGAGCTGGAGTTGAAGGGGGAGGCGGGGCAGAGGGAGCTAGAGTTGAAGGGGGAGGAGGAGCAGAGGGAGATGGAGTTGAAGGGGGAGGAGGAGCGAGGGAGCTGGAGTTGAAGGGGGAGGCGGAGCAGAGGGAGATGGAGTTGAAGGGGGAGGAGGAGCAGAAGGAGCTGGAGTTGAAGGGGGAGGCGGAGCAGAGGGAGCTGGAGTTGAAGGGGGAGGCGGAGCAGAGGGAGCTGGAGTTGAAGGGGGAGGAGGGGGCAGAGGGAGCTAGAGTTGAAGGGGGAGGAGGGGCAGAGGGAGCTGGAGTTGAAGGGGGAGGAGGAGCAGAGGGAACTGGAGTTGAAGGGGGAAGATCAGCAGGAGGTACGGGGGGACGATCAGGGGTCGATCAGAGGGAACTGGTGTTGAAGGGGGAAGATCAGCAGGAGGAACGGGGGGACGATCAGCGGGAAGATCAGCGGCAGGAACAGGGGGAAGATCAGCAGGAGGAATCAGAGGGAACTGGAGTTGAAGGGGGGTGA

Coding sequence (CDS)

ATGGCTGCGTCTTCCCATGCTCCCCCGACCCTTCCGATATTAAATGTTATCTTATGCTATCTAGCAACAATACTATCGGCAGAAGGTGTGTGTCGTAGATCAGGGGGGCGAACAGGGGGAAGAGCAGCGGGAACTGGAGTTGAAGGGGGAGGAGGAGCAGAGGGAGCTGGAGTTGAAGGGGGAGGCGGAGCAGAGGGAGCTGGAGTTGAAGGGGGAGGCGGAGCAGAGGGAGCTGGAGTTGAAGGGGGAGGCGGGGCAGAGGGAGCTAGAGTTGAAGGGGGAGGAGGAGCAGAGGGAGATGGAGTTGAAGGGGGAGGAGGAGCGAGGGAGCTGGAGTTGAAGGGGGAGGCGGAGCAGAGGGAGATGGAGTTGAAGGGGGAGGAGGAGCAGAAGGAGCTGGAGTTGAAGGGGGAGGCGGAGCAGAGGGAGCTGGAGTTGAAGGGGGAGGCGGAGCAGAGGGAGCTGGAGTTGAAGGGGGAGGAGGGGGCAGAGGGAGCTAGAGTTGAAGGGGGAGGAGGGGCAGAGGGAGCTGGAGTTGAAGGGGGAGGAGGAGCAGAGGGAACTGGAGTTGAAGGGGGAAGATCAGCAGGAGGTACGGGGGGACGATCAGGGGTCGATCAGAGGGAACTGGTGTTGAAGGGGGAAGATCAGCAGGAGGAACGGGGGGACGATCAGCGGGAAGATCAGCGGCAGGAACAGGGGGAAGATCAGCAGGAGGAATCAGAGGGAACTGGAGTTGAAGGGGGGTGA

Protein sequence

MAASSHAPPTLPILNVILCYLATILSAEGVCRRSGGRTGGRAAGTGVEGGGGAEGAGVEGGGGAEGAGVEGGGGAEGAGVEGGGGAEGARVEGGGGAEGDGVEGGGGARELELKGEAEQREMELKGEEEQKELELKGEAEQRELELKGEAEQRELELKGEEGAEGARVEGGGGAEGAGVEGGGGAEGTGVEGGRSAGGTGGRSGVDQRELVLKGEDQQEERGDDQREDQRQEQGEDQQEESEGTGVEGG
Homology
[Close]
BLAST of Csor.00g190630 vs. NCBI nr
Match: KAG6607825.1 (hypothetical protein SDJN03_01167, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 390 bits (1001), Expect = 6.95e-135
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0 

Query: 1   MAASSHAPPTLPILNVILCYLATILSAEGVCRRSGGRTGGRAAGTGVEGGGGAEGAGVEG 60
           MAASSHAPPTLPILNVILCYLATILSAEGVCRRSGGRTGGRAAGTGVEGGGGAEGAGVEG
Sbjct: 1   MAASSHAPPTLPILNVILCYLATILSAEGVCRRSGGRTGGRAAGTGVEGGGGAEGAGVEG 60

Query: 61  GGGAEGAGVEGGGGAEGAGVEGGGGAEGARVEGGGGAEGDGVEGGGGARELELKGEAEQR 120
           GGGAEGAGVEGGGGAEGAGVEGGGGAEGARVEGGGGAEGDGVEGGGGARELELKGEAEQR
Sbjct: 61  GGGAEGAGVEGGGGAEGAGVEGGGGAEGARVEGGGGAEGDGVEGGGGARELELKGEAEQR 120

Query: 121 EMELKGEEEQKELELKGEAEQRELELKGEAEQRELELKGEEGAEGARVEGGGGAEGAGVE 180
           EMELKGEEEQKELELKGEAEQRELELKGEAEQRELELKGEEGAEGARVEGGGGAEGAGVE
Sbjct: 121 EMELKGEEEQKELELKGEAEQRELELKGEAEQRELELKGEEGAEGARVEGGGGAEGAGVE 180

Query: 181 GGGGAEGTGVEGGRSAGGTGGRSGVDQRELVLKGEDQQEERGDDQREDQRQEQGEDQQEE 240
           GGGGAEGTGVEGGRSAGGTGGRSGVDQRELVLKGEDQQEERGDDQREDQRQEQGEDQQEE
Sbjct: 181 GGGGAEGTGVEGGRSAGGTGGRSGVDQRELVLKGEDQQEERGDDQREDQRQEQGEDQQEE 240

Query: 241 SEGTGVEGG 249
           SEGTGVEGG
Sbjct: 241 SEGTGVEGG 249

The following BLAST results are available for this feature:
BLAST of Csor.00g190630 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g190630 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6607825.16.95e-135100.00hypothetical protein SDJN03_01167, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g190630 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g190630 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..249

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g190630.m01Csor.00g190630.m01mRNA