Csor.00g190590 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g190590
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	scarecrow-like protein 21
Location	Csor_Chr01: 9754827 .. 9755660 (+)
RNA-Seq Expression	Csor.00g190590
Synteny	Csor.00g190590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTCATCAACTGTTTGGATTTGGAGTCAATAGTGCAGGTGTTTCTTGTACTCCTTATTCCTCTATTCCATCTTTACCTAATACCTTGCTTGGACCCTTGAAATTTAGTGTTAGAAATTCCCCGGCCTCTTCTTCGTTTTTTTCGTCGTCGTATTTTGAATTGGATTCATTTCGGGCGACTACGGTGAGTGATAATCAAGATCAGAGGAACTCCCCTGAGAATCTCTCTGGACTTAGTCCTTCTTGTAATTCGTCGTTTGAAACAAATAGTTTTAATCAAATAGCGTCGTCGAATTTGGATCCGGTGTCGAATGTGTTTGTTTACGATGGATGCTCAAACGAGAATATAAGCTACACGTTGAAACAATTGGAGAGTGTTCTTATGGGGCCGGATAATGAGGAAGTTGTGAGTAAGCCTGATGCTTCGTTTGGAGATAGTAGCAGGCCACAGATTATGGGGCAGAGGTCCTACTCATGGAGCCAAGATCGACAGGGCGGGTTGAATCTTGTACAGTCTCAAACGTTGCCGGTGTCGGTAAGCCAGCGATCTCAAGCAGTTCACTTGGGGAAGCATCAAAAATCGATGGATGAATCGATATTGCAGCAGGGAGGATTTCCATATGATAATTTGAAGGAGTTGCTGATTGAGTGTGCAAGAGCTTTAGCTGAAAACAGGATGGAGGATTTTGATAACTTGGTTGCCATAGCAAGAGGTGCTGTGTCTATCAGCGGAGAACCGATCCAGCGTCTCGGTGCTTACATGGTGGAAGGGTTGGTGGCAAGGAAAGAGGAGTCAGGGGGCAAATATATACCGTGCTCTAAACTGTAG

mRNA sequence

ATGGATTCTCATCAACTGTTTGGATTTGGAGTCAATAGTGCAGGTGTTTCTTGTACTCCTTATTCCTCTATTCCATCTTTACCTAATACCTTGCTTGGACCCTTGAAATTTAGTGTTAGAAATTCCCCGGCCTCTTCTTCGTTTTTTTCGTCGTCGTATTTTGAATTGGATTCATTTCGGGCGACTACGGTGAGTGATAATCAAGATCAGAGGAACTCCCCTGAGAATCTCTCTGGACTTAGTCCTTCTTGTAATTCGTCGTTTGAAACAAATAGTTTTAATCAAATAGCGTCGTCGAATTTGGATCCGGTGTCGAATGTGTTTGTTTACGATGGATGCTCAAACGAGAATATAAGCTACACGTTGAAACAATTGGAGAGTGTTCTTATGGGGCCGGATAATGAGGAAGTTGTGAGTAAGCCTGATGCTTCGTTTGGAGATAGTAGCAGGCCACAGATTATGGGGCAGAGGTCCTACTCATGGAGCCAAGATCGACAGGGCGGGTTGAATCTTGTACAGTCTCAAACGTTGCCGGTGTCGGTAAGCCAGCGATCTCAAGCAGTTCACTTGGGGAAGCATCAAAAATCGATGGATGAATCGATATTGCAGCAGGGAGGATTTCCATATGATAATTTGAAGGAGTTGCTGATTGAGTGTGCAAGAGCTTTAGCTGAAAACAGGATGGAGGATTTTGATAACTTGGTTGCCATAGCAAGAGGTGCTGTGTCTATCAGCGGAGAACCGATCCAGCGTCTCGGTGCTTACATGGTGGAAGGGTTGGTGGCAAGGAAAGAGGAGTCAGGGGGCAAATATATACCGTGCTCTAAACTGTAG

Coding sequence (CDS)

ATGGATTCTCATCAACTGTTTGGATTTGGAGTCAATAGTGCAGGTGTTTCTTGTACTCCTTATTCCTCTATTCCATCTTTACCTAATACCTTGCTTGGACCCTTGAAATTTAGTGTTAGAAATTCCCCGGCCTCTTCTTCGTTTTTTTCGTCGTCGTATTTTGAATTGGATTCATTTCGGGCGACTACGGTGAGTGATAATCAAGATCAGAGGAACTCCCCTGAGAATCTCTCTGGACTTAGTCCTTCTTGTAATTCGTCGTTTGAAACAAATAGTTTTAATCAAATAGCGTCGTCGAATTTGGATCCGGTGTCGAATGTGTTTGTTTACGATGGATGCTCAAACGAGAATATAAGCTACACGTTGAAACAATTGGAGAGTGTTCTTATGGGGCCGGATAATGAGGAAGTTGTGAGTAAGCCTGATGCTTCGTTTGGAGATAGTAGCAGGCCACAGATTATGGGGCAGAGGTCCTACTCATGGAGCCAAGATCGACAGGGCGGGTTGAATCTTGTACAGTCTCAAACGTTGCCGGTGTCGGTAAGCCAGCGATCTCAAGCAGTTCACTTGGGGAAGCATCAAAAATCGATGGATGAATCGATATTGCAGCAGGGAGGATTTCCATATGATAATTTGAAGGAGTTGCTGATTGAGTGTGCAAGAGCTTTAGCTGAAAACAGGATGGAGGATTTTGATAACTTGGTTGCCATAGCAAGAGGTGCTGTGTCTATCAGCGGAGAACCGATCCAGCGTCTCGGTGCTTACATGGTGGAAGGGTTGGTGGCAAGGAAAGAGGAGTCAGGGGGCAAATATATACCGTGCTCTAAACTGTAG

Protein sequence

MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFRATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSNVFVYDGCSNENISYTLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGGLNLVQSQTLPVSVSQRSQAVHLGKHQKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESGGKYIPCSKL

Homology

[Close]

BLAST of Csor.00g190590 vs. ExPASy Swiss-Prot
Match: Q69VG1 (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CIGR1 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.3e-22
Identity = 93/277 (33.57%), Postives = 137/277 (49.46%), Query Frame = 0


Query: 1   MDSHQLFGFGVNSAGVSCTPYSSIPSLPNT-----LLGPLKFSVRNSPASSSFFSSSYFE 60
           MD HQL  + +  A V       IP+  N         PLK+   +SP +     SS FE
Sbjct: 1   MDLHQLLKYRLTGANV----VYEIPTENNLQNSPWQANPLKYEFSDSPYTP---LSSQFE 60

Query: 61  LDSFRATTVSDNQDQRNSPENLSG--LSP-SCNSSFETNSFNQIASSNLDPVSNVFVYDG 120
            D+  A T  +  D ++S E +S   +SP   +SS+       +   N+   ++      
Sbjct: 61  CDNLSALT--NTPDNQSSTETISAQPISPLEADSSYRQAGI--LLQENIQVGADPLY--A 120

Query: 121 CSNENISYTLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWS-QDRQGGLNL 180
            S  N+ + L+++E+VLM PD ++  +     F +    Q++ QRS +WS + RQ    +
Sbjct: 121 TSRHNMQHALREIETVLMAPDTDDATTSTKHEFEEIKPAQLVRQRSRTWSHESRQPLPGV 180

Query: 181 VQSQTLPVSVSQRSQAVHLGKHQKSMDESILQQGGFPYDNLKELLIECARALAENRMEDF 240
            +SQ         S      K Q+ + E        P   +K+LL  CA AL+E+R E+F
Sbjct: 181 GRSQFASGGYPTASYEFRPEKRQRELRED-------PQIIVKQLLTRCAEALSEDRTEEF 240

Query: 241 DNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESG 269
             LV  ARG VSI+GEPIQRLGAY++EGLVAR   SG
Sbjct: 241 HKLVQEARGVVSINGEPIQRLGAYLLEGLVARHGNSG 257

[Close]

BLAST of Csor.00g190590 vs. ExPASy Swiss-Prot
Match: Q8GVE1 (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CIGR2 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.3e-12
Identity = 38/70 (54.29%), Postives = 46/70 (65.71%), Query Frame = 0


Query: 199 ESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVE 258
           E  ++  G P  NLKELLI CARA+ E      D ++   R  VS+SGEP++RLGAYMVE
Sbjct: 161 EKWVRMMGIPRGNLKELLIACARAVEEKNSFAIDMMIPELRKIVSVSGEPLERLGAYMVE 220

Query: 259 GLVARKEESG 269
           GLVAR   SG
Sbjct: 221 GLVARLASSG 230

[Close]

BLAST of Csor.00g190590 vs. ExPASy Swiss-Prot
Match: Q9S7H5 (Scarecrow-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=SCL21 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 9.4e-09
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 211 NLKELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESG 269
           +LK +L+ CA+A++EN +      +   RG VSISGEPIQRLGAYM+EGLVAR   SG
Sbjct: 49  DLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASG 106

[Close]

BLAST of Csor.00g190590 vs. ExPASy Swiss-Prot
Match: Q9LDL7 (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana OX=3702 GN=PAT1 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.2e-08
Identity = 48/176 (27.27%), Postives = 86/176 (48.86%), Query Frame = 0


Query: 93  FNQIASSNLDPVSNVFVYDGCSNENISYTLKQLESVLMGPDNEEVVSKPDASFGDSSRPQ 152
           +N ++++  D      V D  +  +  + ++++E+V+MGPD+ +++     SF  ++  +
Sbjct: 46  YNALSTATYDDTCGSCVTDELN--DFKHKIREIETVMMGPDSLDLLVDCTDSFDSTASQE 105

Query: 153 IMGQRSYSWSQDRQGGLNLVQSQTLPVSVSQRSQAVHLGKHQKSMDESILQQGGFPYDNL 212
           I G RS                 TL  ++S+R                          +L
Sbjct: 106 INGWRS-----------------TLE-AISRR--------------------------DL 165

Query: 213 KELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESG 269
           +  L+ CA+A++EN +    +++   R  VS+SGEPIQRLGAY++EGLVA+   SG
Sbjct: 166 RADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSG 175

[Close]

BLAST of Csor.00g190590 vs. ExPASy Swiss-Prot
Match: Q8H125 (Scarecrow-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SCL5 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.1e-08
Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 211 NLKELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESG 269
           +LK +L ECA+A+    +E  D L++  +  VS+SGEP+QRLGAYM+EGLVAR   SG
Sbjct: 226 DLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSG 283

[Close]

BLAST of Csor.00g190590 vs. NCBI nr
Match: KAG6607829.1 (Chitin-inducible gibberellin-responsive protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 539 bits (1389), Expect = 4.44e-193
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFR 60
           MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFR
Sbjct: 1   MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFR 60

Query: 61  ATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSNVFVYDGCSNENISY 120
           ATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSNVFVYDGCSNENISY
Sbjct: 61  ATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSNVFVYDGCSNENISY 120

Query: 121 TLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGGLNLVQSQTLPVS 180
           TLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGGLNLVQSQTLPVS
Sbjct: 121 TLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGGLNLVQSQTLPVS 180

Query: 181 VSQRSQAVHLGKHQKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIARG 240
           VSQRSQAVHLGKHQKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIARG
Sbjct: 181 VSQRSQAVHLGKHQKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIARG 240

Query: 241 AVSISGEPIQRLGAYMVEGLVARKEESGGKYIPCSKL 277
           AVSISGEPIQRLGAYMVEGLVARKEESGGKYIPCSKL
Sbjct: 241 AVSISGEPIQRLGAYMVEGLVARKEESGGKYIPCSKL 277

[Close]

BLAST of Csor.00g190590 vs. NCBI nr
Match: KAG7015227.1 (Chitin-inducible gibberellin-responsive protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 513 bits (1320), Expect = 6.59e-178
Identity = 265/268 (98.88%), Postives = 266/268 (99.25%), Query Frame = 0


Query: 1   MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFR 60
           MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFR
Sbjct: 1   MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFR 60

Query: 61  ATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSNVFVYDGCSNENISY 120
           ATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSNVFVYDGCSNENISY
Sbjct: 61  ATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSNVFVYDGCSNENISY 120

Query: 121 TLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGGLNLVQSQTLPVS 180
           TLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQ+RQGGLNLVQSQ LPVS
Sbjct: 121 TLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQERQGGLNLVQSQMLPVS 180

Query: 181 VSQRSQAVHLGKHQKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIARG 240
           VSQRSQAVHLGK QKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIARG
Sbjct: 181 VSQRSQAVHLGKRQKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIARG 240

Query: 241 AVSISGEPIQRLGAYMVEGLVARKEESG 268
           AVSISGEPIQRLGAYMVEGLVARKEESG
Sbjct: 241 AVSISGEPIQRLGAYMVEGLVARKEESG 268

[Close]

BLAST of Csor.00g190590 vs. NCBI nr
Match: XP_022940516.1 (scarecrow-like protein 21 [Cucurbita moschata])

HSP 1 Score: 512 bits (1318), Expect = 1.32e-177
Identity = 265/268 (98.88%), Postives = 265/268 (98.88%), Query Frame = 0


Query: 1   MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFR 60
           MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFR
Sbjct: 1   MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFR 60

Query: 61  ATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSNVFVYDGCSNENISY 120
           ATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSN FVYDGCSNENISY
Sbjct: 61  ATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSNAFVYDGCSNENISY 120

Query: 121 TLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGGLNLVQSQTLPVS 180
           TLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGGLNLVQSQTLPVS
Sbjct: 121 TLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGGLNLVQSQTLPVS 180

Query: 181 VSQRSQAVHLGKHQKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIARG 240
           VSQRSQAVHLGK QKSMDESILQQGGF YDNLKELLIECARALAENRMEDFDNLVAIARG
Sbjct: 181 VSQRSQAVHLGKRQKSMDESILQQGGFSYDNLKELLIECARALAENRMEDFDNLVAIARG 240

Query: 241 AVSISGEPIQRLGAYMVEGLVARKEESG 268
           AVSISGEPIQRLGAYMVEGLVARKEESG
Sbjct: 241 AVSISGEPIQRLGAYMVEGLVARKEESG 268

[Close]

BLAST of Csor.00g190590 vs. NCBI nr
Match: XP_023521994.1 (scarecrow-like protein 21 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 482 bits (1241), Expect = 6.08e-166
Identity = 253/268 (94.40%), Postives = 256/268 (95.52%), Query Frame = 0


Query: 1   MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFR 60
           MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLL PLKFSVRNSPASSS FSS YFELDSF 
Sbjct: 1   MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLRPLKFSVRNSPASSSIFSS-YFELDSFL 60

Query: 61  ATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSNVFVYDGCSNENISY 120
            TTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIA SNL+P SN FVYDGCSNENISY
Sbjct: 61  ETTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIALSNLNPGSNAFVYDGCSNENISY 120

Query: 121 TLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGGLNLVQSQTLPVS 180
           TLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQG  +LVQ QTLPVS
Sbjct: 121 TLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGESSLVQLQTLPVS 180

Query: 181 VSQRSQAVHLGKHQKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIARG 240
           +SQRSQAVHLGK QKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIARG
Sbjct: 181 ISQRSQAVHLGKRQKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIARG 240

Query: 241 AVSISGEPIQRLGAYMVEGLVARKEESG 268
           AVSISGEPIQRLGAYMVEGLVARKEESG
Sbjct: 241 AVSISGEPIQRLGAYMVEGLVARKEESG 267

[Close]

BLAST of Csor.00g190590 vs. NCBI nr
Match: XP_022981431.1 (scarecrow-like protein 21 [Cucurbita maxima])

HSP 1 Score: 459 bits (1181), Expect = 7.03e-157
Identity = 245/269 (91.08%), Postives = 250/269 (92.94%), Query Frame = 0


Query: 1   MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFR 60
           MDS QLFGFGVNSAG SCTPYSS+PSLPNTLLGPLKFSVRNSPASSSFFSS YFELDSF 
Sbjct: 1   MDSRQLFGFGVNSAGFSCTPYSSVPSLPNTLLGPLKFSVRNSPASSSFFSS-YFELDSFL 60

Query: 61  ATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASS-NLDPVSNVFVYDGCSNENIS 120
            TTVSDNQDQRNSPENLSGL PSCNSSFETN   QIASS NLDP  N FVY+GCSNENIS
Sbjct: 61  ETTVSDNQDQRNSPENLSGLGPSCNSSFETN---QIASSSNLDPGLNAFVYNGCSNENIS 120

Query: 121 YTLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGGLNLVQSQTLPV 180
           +TLKQLESVLMGPDNEEVVSKPDASFGDS RPQIMGQRSY WSQDRQG  NLVQSQTLPV
Sbjct: 121 FTLKQLESVLMGPDNEEVVSKPDASFGDSCRPQIMGQRSYLWSQDRQGESNLVQSQTLPV 180

Query: 181 SVSQRSQAVHLGKHQKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIAR 240
           S+S+RSQAVHLGK QKSMDESILQQGG PYDNLKELLIECARALAENRMEDFDNLVAIAR
Sbjct: 181 SISRRSQAVHLGKRQKSMDESILQQGGSPYDNLKELLIECARALAENRMEDFDNLVAIAR 240

Query: 241 GAVSISGEPIQRLGAYMVEGLVARKEESG 268
           GAVSISGEPIQRLGAYMVEGLVARKEESG
Sbjct: 241 GAVSISGEPIQRLGAYMVEGLVARKEESG 265

[Close]

BLAST of Csor.00g190590 vs. ExPASy TrEMBL
Match: A0A6J1FIP5 (scarecrow-like protein 21 OS=Cucurbita moschata OX=3662 GN=LOC111446089 PE=3 SV=1)

HSP 1 Score: 512 bits (1318), Expect = 6.41e-178
Identity = 265/268 (98.88%), Postives = 265/268 (98.88%), Query Frame = 0


Query: 1   MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFR 60
           MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFR
Sbjct: 1   MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFR 60

Query: 61  ATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSNVFVYDGCSNENISY 120
           ATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSN FVYDGCSNENISY
Sbjct: 61  ATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSNAFVYDGCSNENISY 120

Query: 121 TLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGGLNLVQSQTLPVS 180
           TLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGGLNLVQSQTLPVS
Sbjct: 121 TLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGGLNLVQSQTLPVS 180

Query: 181 VSQRSQAVHLGKHQKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIARG 240
           VSQRSQAVHLGK QKSMDESILQQGGF YDNLKELLIECARALAENRMEDFDNLVAIARG
Sbjct: 181 VSQRSQAVHLGKRQKSMDESILQQGGFSYDNLKELLIECARALAENRMEDFDNLVAIARG 240

Query: 241 AVSISGEPIQRLGAYMVEGLVARKEESG 268
           AVSISGEPIQRLGAYMVEGLVARKEESG
Sbjct: 241 AVSISGEPIQRLGAYMVEGLVARKEESG 268

[Close]

BLAST of Csor.00g190590 vs. ExPASy TrEMBL
Match: A0A6J1IWJ4 (scarecrow-like protein 21 OS=Cucurbita maxima OX=3661 GN=LOC111480553 PE=3 SV=1)

HSP 1 Score: 459 bits (1181), Expect = 3.40e-157
Identity = 245/269 (91.08%), Postives = 250/269 (92.94%), Query Frame = 0


Query: 1   MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFR 60
           MDS QLFGFGVNSAG SCTPYSS+PSLPNTLLGPLKFSVRNSPASSSFFSS YFELDSF 
Sbjct: 1   MDSRQLFGFGVNSAGFSCTPYSSVPSLPNTLLGPLKFSVRNSPASSSFFSS-YFELDSFL 60

Query: 61  ATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASS-NLDPVSNVFVYDGCSNENIS 120
            TTVSDNQDQRNSPENLSGL PSCNSSFETN   QIASS NLDP  N FVY+GCSNENIS
Sbjct: 61  ETTVSDNQDQRNSPENLSGLGPSCNSSFETN---QIASSSNLDPGLNAFVYNGCSNENIS 120

Query: 121 YTLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGGLNLVQSQTLPV 180
           +TLKQLESVLMGPDNEEVVSKPDASFGDS RPQIMGQRSY WSQDRQG  NLVQSQTLPV
Sbjct: 121 FTLKQLESVLMGPDNEEVVSKPDASFGDSCRPQIMGQRSYLWSQDRQGESNLVQSQTLPV 180

Query: 181 SVSQRSQAVHLGKHQKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIAR 240
           S+S+RSQAVHLGK QKSMDESILQQGG PYDNLKELLIECARALAENRMEDFDNLVAIAR
Sbjct: 181 SISRRSQAVHLGKRQKSMDESILQQGGSPYDNLKELLIECARALAENRMEDFDNLVAIAR 240

Query: 241 GAVSISGEPIQRLGAYMVEGLVARKEESG 268
           GAVSISGEPIQRLGAYMVEGLVARKEESG
Sbjct: 241 GAVSISGEPIQRLGAYMVEGLVARKEESG 265

[Close]

BLAST of Csor.00g190590 vs. ExPASy TrEMBL
Match: A0A0A0LD17 (GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G405510 PE=3 SV=1)

HSP 1 Score: 392 bits (1008), Expect = 7.76e-131
Identity = 217/281 (77.22%), Postives = 235/281 (83.63%), Query Frame = 0


Query: 1   MDSHQLFGFGVNSA-GVSCTPY-SSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDS 60
           MDSHQLFGFGVNSA G+S TP  SS+PSLPNTLLGPLKF++ NSPA S  FSS +FE DS
Sbjct: 1   MDSHQLFGFGVNSAAGLSFTPSCSSVPSLPNTLLGPLKFNLSNSPALSPLFSS-HFEFDS 60

Query: 61  FRATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPV----------SNVF 120
           F  TTVSD+ DQRNSP+NLSGLSPSCNSSFET+SFNQIASS LD            SN F
Sbjct: 61  FTTTTVSDSPDQRNSPDNLSGLSPSCNSSFETSSFNQIASSYLDTFEDESRQLYSRSNAF 120

Query: 121 VYDGCSNENISYTLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGG 180
           VYDGCS ENISYTLKQLESVLMGPDNEEVV+KPD SFG S RPQ+MG RSYSWSQDR GG
Sbjct: 121 VYDGCSTENISYTLKQLESVLMGPDNEEVVNKPDVSFGVSGRPQMMGPRSYSWSQDRHGG 180

Query: 181 LNLVQSQTLPVSVSQRSQAVHLGKHQKSMDESILQQ-GGFPYDNLKELLIECARALAENR 240
              VQSQ  PVS SQ+S+AVHLGK QKSMDES+LQQ GG P DNLK+LLI CA+AL++NR
Sbjct: 181 SYGVQSQASPVSRSQKSEAVHLGKRQKSMDESLLQQQGGLPSDNLKDLLIACAKALSDNR 240

Query: 241 MEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESG 268
           M+DFDNLVA ARGAVSI GEPIQRLGAYMVEGLVARKEESG
Sbjct: 241 MKDFDNLVATARGAVSIGGEPIQRLGAYMVEGLVARKEESG 280

[Close]

BLAST of Csor.00g190590 vs. ExPASy TrEMBL
Match: A0A5A7V8I4 (Scarecrow-like protein 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00810 PE=3 SV=1)

HSP 1 Score: 387 bits (994), Expect = 1.00e-128
Identity = 217/281 (77.22%), Postives = 235/281 (83.63%), Query Frame = 0


Query: 1   MDSHQLFGFGVNSA-GVSCT-PYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDS 60
           MDSHQLFGFGVNSA G+S T P SS+PSLPNTLLGPLKF++ +SPA S  FSS +FE DS
Sbjct: 1   MDSHQLFGFGVNSAAGLSFTSPCSSVPSLPNTLLGPLKFNLSSSPALSPLFSS-HFEFDS 60

Query: 61  FRATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPV----------SNVF 120
           F  TTVS + DQRNSP+NLSGLSPSCNSSFET+SFNQIASS LD            SN F
Sbjct: 61  FTTTTVSGSPDQRNSPDNLSGLSPSCNSSFETSSFNQIASSYLDHFEDESRQLHSGSNAF 120

Query: 121 VYDGCSNENISYTLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGG 180
           VYDG S ENISYTLKQLESVLMGPDNEEVVSKPD SFG S RPQ+MGQRSYSWSQDR+GG
Sbjct: 121 VYDGYSAENISYTLKQLESVLMGPDNEEVVSKPDVSFGVSGRPQMMGQRSYSWSQDRRGG 180

Query: 181 LNLVQSQTLPVSVSQRSQAVHLGKHQKSMDESILQQ-GGFPYDNLKELLIECARALAENR 240
              VQSQ  PVS SQ+S+AVHLGK QKSMDES+LQQ GG P DNLK+LLI CA+AL+ENR
Sbjct: 181 SYGVQSQASPVSRSQQSEAVHLGKRQKSMDESLLQQQGGLPSDNLKDLLIACAKALSENR 240

Query: 241 MEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESG 268
           M+DFDNLVA ARGAVSI GEPIQRLGAYMVEGLVARKEESG
Sbjct: 241 MKDFDNLVATARGAVSIGGEPIQRLGAYMVEGLVARKEESG 280

[Close]

BLAST of Csor.00g190590 vs. ExPASy TrEMBL
Match: A0A5D3DQQ1 (Scarecrow-like protein 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold668G00110 PE=3 SV=1)

HSP 1 Score: 387 bits (994), Expect = 1.00e-128
Identity = 217/281 (77.22%), Postives = 235/281 (83.63%), Query Frame = 0


Query: 1   MDSHQLFGFGVNSA-GVSCT-PYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDS 60
           MDSHQLFGFGVNSA G+S T P SS+PSLPNTLLGPLKF++ +SPA S  FSS +FE DS
Sbjct: 1   MDSHQLFGFGVNSAAGLSFTSPCSSVPSLPNTLLGPLKFNLSSSPALSPLFSS-HFEFDS 60

Query: 61  FRATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPV----------SNVF 120
           F  TTVS + DQRNSP+NLSGLSPSCNSSFET+SFNQIASS LD            SN F
Sbjct: 61  FTTTTVSGSPDQRNSPDNLSGLSPSCNSSFETSSFNQIASSYLDHFEDESRQLHSGSNAF 120

Query: 121 VYDGCSNENISYTLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQDRQGG 180
           VYDG S ENISYTLKQLESVLMGPDNEEVVSKPD SFG S RPQ+MGQRSYSWSQDR+GG
Sbjct: 121 VYDGYSAENISYTLKQLESVLMGPDNEEVVSKPDVSFGVSGRPQMMGQRSYSWSQDRRGG 180

Query: 181 LNLVQSQTLPVSVSQRSQAVHLGKHQKSMDESILQQ-GGFPYDNLKELLIECARALAENR 240
              VQSQ  PVS SQ+S+AVHLGK QKSMDES+LQQ GG P DNLK+LLI CA+AL+ENR
Sbjct: 181 SYGVQSQASPVSRSQQSEAVHLGKRQKSMDESLLQQQGGLPSDNLKDLLIACAKALSENR 240

Query: 241 MEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESG 268
           M+DFDNLVA ARGAVSI GEPIQRLGAYMVEGLVARKEESG
Sbjct: 241 MKDFDNLVATARGAVSIGGEPIQRLGAYMVEGLVARKEESG 280

[Close]

BLAST of Csor.00g190590 vs. TAIR 10
Match: AT2G04890.1 (SCARECROW-like 21 )

HSP 1 Score: 62.4 bits (150), Expect = 6.6e-10
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 211 NLKELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESG 269
           +LK +L+ CA+A++EN +      +   RG VSISGEPIQRLGAYM+EGLVAR   SG
Sbjct: 49  DLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASG 106

[Close]

BLAST of Csor.00g190590 vs. TAIR 10
Match: AT5G48150.1 (GRAS family transcription factor )

HSP 1 Score: 62.0 bits (149), Expect = 8.7e-10
Identity = 48/176 (27.27%), Postives = 86/176 (48.86%), Query Frame = 0


Query: 93  FNQIASSNLDPVSNVFVYDGCSNENISYTLKQLESVLMGPDNEEVVSKPDASFGDSSRPQ 152
           +N ++++  D      V D  +  +  + ++++E+V+MGPD+ +++     SF  ++  +
Sbjct: 46  YNALSTATYDDTCGSCVTDELN--DFKHKIREIETVMMGPDSLDLLVDCTDSFDSTASQE 105

Query: 153 IMGQRSYSWSQDRQGGLNLVQSQTLPVSVSQRSQAVHLGKHQKSMDESILQQGGFPYDNL 212
           I G RS                 TL  ++S+R                          +L
Sbjct: 106 INGWRS-----------------TLE-AISRR--------------------------DL 165

Query: 213 KELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESG 269
           +  L+ CA+A++EN +    +++   R  VS+SGEPIQRLGAY++EGLVA+   SG
Sbjct: 166 RADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSG 175

[Close]

BLAST of Csor.00g190590 vs. TAIR 10
Match: AT5G48150.2 (GRAS family transcription factor )

HSP 1 Score: 62.0 bits (149), Expect = 8.7e-10
Identity = 48/176 (27.27%), Postives = 86/176 (48.86%), Query Frame = 0


Query: 93  FNQIASSNLDPVSNVFVYDGCSNENISYTLKQLESVLMGPDNEEVVSKPDASFGDSSRPQ 152
           +N ++++  D      V D  +  +  + ++++E+V+MGPD+ +++     SF  ++  +
Sbjct: 46  YNALSTATYDDTCGSCVTDELN--DFKHKIREIETVMMGPDSLDLLVDCTDSFDSTASQE 105

Query: 153 IMGQRSYSWSQDRQGGLNLVQSQTLPVSVSQRSQAVHLGKHQKSMDESILQQGGFPYDNL 212
           I G RS                 TL  ++S+R                          +L
Sbjct: 106 INGWRS-----------------TLE-AISRR--------------------------DL 165

Query: 213 KELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESG 269
           +  L+ CA+A++EN +    +++   R  VS+SGEPIQRLGAY++EGLVA+   SG
Sbjct: 166 RADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSG 175

[Close]

BLAST of Csor.00g190590 vs. TAIR 10
Match: AT1G50600.1 (scarecrow-like 5 )

HSP 1 Score: 61.2 bits (147), Expect = 1.5e-09
Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 211 NLKELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESG 269
           +LK +L ECA+A+    +E  D L++  +  VS+SGEP+QRLGAYM+EGLVAR   SG
Sbjct: 226 DLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSG 283

[Close]

BLAST of Csor.00g190590 vs. TAIR 10
Match: AT1G21450.1 (SCARECROW-like 1 )

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09
Identity = 30/56 (53.57%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 213 KELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESG 269
           K++LI CARAL+E ++E+  ++V   R  VSI G+P QR+ AYMVEGL AR   SG
Sbjct: 223 KQILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASG 278

The following BLAST results are available for this feature:

BLAST of Csor.00g190590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q69VG1	3.3e-22	33.57	Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonic...	[more]
Q8GVE1	5.3e-12	54.29	Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonic...	[more]
Q9S7H5	9.4e-09	56.90	Scarecrow-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=SCL21 PE=1 SV=1	[more]
Q9LDL7	1.2e-08	27.27	Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana OX=3702 GN=PAT1...	[more]
Q8H125	2.1e-08	53.45	Scarecrow-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SCL5 PE=1 SV=1	[more]

BLAST of Csor.00g190590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607829.1	4.44e-193	100.00	Chitin-inducible gibberellin-responsive protein 1, partial [Cucurbita argyrosper...	[more]
KAG7015227.1	6.59e-178	98.88	Chitin-inducible gibberellin-responsive protein 1, partial [Cucurbita argyrosper...	[more]
XP_022940516.1	1.32e-177	98.88	scarecrow-like protein 21 [Cucurbita moschata]	[more]
XP_023521994.1	6.08e-166	94.40	scarecrow-like protein 21 [Cucurbita pepo subsp. pepo]	[more]
XP_022981431.1	7.03e-157	91.08	scarecrow-like protein 21 [Cucurbita maxima]	[more]

BLAST of Csor.00g190590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FIP5	6.41e-178	98.88	scarecrow-like protein 21 OS=Cucurbita moschata OX=3662 GN=LOC111446089 PE=3 SV=...	[more]
A0A6J1IWJ4	3.40e-157	91.08	scarecrow-like protein 21 OS=Cucurbita maxima OX=3661 GN=LOC111480553 PE=3 SV=1	[more]
A0A0A0LD17	7.76e-131	77.22	GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G405510 PE=3 S...	[more]
A0A5A7V8I4	1.00e-128	77.22	Scarecrow-like protein 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3DQQ1	1.00e-128	77.22	Scarecrow-like protein 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Csor.00g190590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04890.1	6.6e-10	56.90	SCARECROW-like 21	[more]
AT5G48150.1	8.7e-10	27.27	GRAS family transcription factor	[more]
AT5G48150.2	8.7e-10	27.27	GRAS family transcription factor	[more]
AT1G50600.1	1.5e-09	53.45	scarecrow-like 5	[more]
AT1G21450.1	1.9e-09	53.57	SCARECROW-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 212..265 e-value: 2.4E-6 score: 26.7
IPR005202	Transcription factor GRAS	PANTHER	PTHR31636	OSJNBA0084A10.13 PROTEIN-RELATED	coord: 19..269
IPR005202	Transcription factor GRAS	PROSITE	PS50985	GRAS	coord: 203..277 score: 13.006729
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..159
None	No IPR available	PANTHER	PTHR31636:SF151	CHITIN-INDUCIBLE GIBBERELLIN-RESPONSIVE PROTEIN 1	coord: 19..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g190590.m01	Csor.00g190590.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding