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Csor.00g190480 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAAGTGCGAGCTGTGTGGGCAGCTAGCGAGGACTTTCTGTGAGTCCGATCGGGCGAACCTATGTTGGGACTGCGATGAGAAGGTTCACTGTGCTAATTTTCTCGTTGCTAAGCATTCTAGGAGTCTTCTATGTCGTGCGTGTCAGTCGCCGACTCCATGGACGGCATCTGGTCGGAAGCTTACGCCTACGGTTTCTGTGTGTGAGGGATGTGTTGAAGTCCATGGTGGTAAATGCGAGCAAGGTGGATTTCAAGAGCGCCGTAGAGATAACGAGGAGAAAGTTAATGGTGGTGATGATTTTGACGATGGTGAAGGTTTCGGGAGCTATGAGGGAGGTGATAGTGAGGATGCTGATGAGGATGACGATGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAGGATGAAGATGGAGAAAACCAGGTGGTTCCGTGGTCTTGTGCGTCTTCTTCGACTCCACCACCACCACCGACAGTGACTTCTAGCAGCGAGGGCGAGATGTCAGCTTGCGCTGGTGGCGTATCGAAGCGGAGGAGAGAGTACGACGTCGATCTCGATTCCGATGTATGTATTAATGGATTTTTCTTCTTTTGCTGCTTTCTTTTCTTTTATGTTCTTATTTTCCTTGTCTGTGCGGAAGGAAAACGTTGTGGATTTGGAATCCCTTTGTCCGTTCATTTGCTTGTCTAGAATCGGTGTTTTGAAAATATGATAGCGATTTCGGTTCTCTTAGTGAGTGAAAACTCAAGATTAGAGCCGAATCTCTCTATTTCATAAACGATACGAATTTCATCCTTCAGAACCTATGATTTTGCACATAATCATTTTTGATATCCCGATCTGAAACATCATCAACATTCTCTGAGTTGTTAATTCCCAGTGATCCAAACAGGATTTTAACAATCGTTTGCCGTTTGAATGCAGGACGAGTTCGAGTGTTCTTCTGCTCAACAACGAACCAGGCCTTCTTACAACGACGAAGCGACTTCCTCTACTTCCCACAGGCCACCGAAGCAAGCAAGAGTTACAGGACCGACCCAATCAGCCAGCATCATCCCCGATGATGAAGCTCGTAAAGCAGATTTAAAATCCACGACTGTCATTAGATCGATCCAGAGTCTCCAGAATCGTCTGCCCACCGGTATCAACGATGCTTCCAAACTGATTTTTGGGATATGCAAAATGAGCAGAGATCAGAATCGTTGA ATGATGAAGTGCGAGCTGTGTGGGCAGCTAGCGAGGACTTTCTGTGAGTCCGATCGGGCGAACCTATGTTGGGACTGCGATGAGAAGGTTCACTGTGCTAATTTTCTCGTTGCTAAGCATTCTAGGAGTCTTCTATGTCGTGCGTGTCAGTCGCCGACTCCATGGACGGCATCTGGTCGGAAGCTTACGCCTACGGTTTCTGTGTGTGAGGGATGTGTTGAAGTCCATGGTGGTAAATGCGAGCAAGGTGGATTTCAAGAGCGCCGTAGAGATAACGAGGAGAAAGTTAATGGTGGTGATGATTTTGACGATGGTGAAGGTTTCGGGAGCTATGAGGGAGGTGATAGTGAGGATGCTGATGAGGATGACGATGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAGGATGAAGATGGAGAAAACCAGGTGGTTCCGTGGTCTTGTGCGTCTTCTTCGACTCCACCACCACCACCGACAGTGACTTCTAGCAGCGAGGGCGAGATGTCAGCTTGCGCTGGTGGCGTATCGAAGCGGAGGAGAGAGTACGACGTCGATCTCGATTCCGATGACGAGTTCGAGTGTTCTTCTGCTCAACAACGAACCAGGCCTTCTTACAACGACGAAGCGACTTCCTCTACTTCCCACAGGCCACCGAAGCAAGCAAGAGTTACAGGACCGACCCAATCAGCCAGCATCATCCCCGATGATGAAGCTCGTAAAGCAGATTTAAAATCCACGACTGTCATTAGATCGATCCAGAGTCTCCAGAATCGTCTGCCCACCGGTATCAACGATGCTTCCAAACTGATTTTTGGGATATGCAAAATGAGCAGAGATCAGAATCGTTGA ATGATGAAGTGCGAGCTGTGTGGGCAGCTAGCGAGGACTTTCTGTGAGTCCGATCGGGCGAACCTATGTTGGGACTGCGATGAGAAGGTTCACTGTGCTAATTTTCTCGTTGCTAAGCATTCTAGGAGTCTTCTATGTCGTGCGTGTCAGTCGCCGACTCCATGGACGGCATCTGGTCGGAAGCTTACGCCTACGGTTTCTGTGTGTGAGGGATGTGTTGAAGTCCATGGTGGTAAATGCGAGCAAGGTGGATTTCAAGAGCGCCGTAGAGATAACGAGGAGAAAGTTAATGGTGGTGATGATTTTGACGATGGTGAAGGTTTCGGGAGCTATGAGGGAGGTGATAGTGAGGATGCTGATGAGGATGACGATGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAGGATGAAGATGGAGAAAACCAGGTGGTTCCGTGGTCTTGTGCGTCTTCTTCGACTCCACCACCACCACCGACAGTGACTTCTAGCAGCGAGGGCGAGATGTCAGCTTGCGCTGGTGGCGTATCGAAGCGGAGGAGAGAGTACGACGTCGATCTCGATTCCGATGACGAGTTCGAGTGTTCTTCTGCTCAACAACGAACCAGGCCTTCTTACAACGACGAAGCGACTTCCTCTACTTCCCACAGGCCACCGAAGCAAGCAAGAGTTACAGGACCGACCCAATCAGCCAGCATCATCCCCGATGATGAAGCTCGTAAAGCAGATTTAAAATCCACGACTGTCATTAGATCGATCCAGAGTCTCCAGAATCGTCTGCCCACCGGTATCAACGATGCTTCCAAACTGATTTTTGGGATATGCAAAATGAGCAGAGATCAGAATCGTTGA MMKCELCGQLARTFCESDRANLCWDCDEKVHCANFLVAKHSRSLLCRACQSPTPWTASGRKLTPTVSVCEGCVEVHGGKCEQGGFQERRRDNEEKVNGGDDFDDGEGFGSYEGGDSEDADEDDDEEEEEEEEEEEDEDGENQVVPWSCASSSTPPPPPTVTSSSEGEMSACAGGVSKRRREYDVDLDSDDEFECSSAQQRTRPSYNDEATSSTSHRPPKQARVTGPTQSASIIPDDEARKADLKSTTVIRSIQSLQNRLPTGINDASKLIFGICKMSRDQNR Homology
BLAST of Csor.00g190480 vs. ExPASy Swiss-Prot
Match: O23379 (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN=COL11 PE=1 SV=2) HSP 1 Score: 61.2 bits (147), Expect = 2.1e-08 Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 0
BLAST of Csor.00g190480 vs. ExPASy Swiss-Prot
Match: Q1G3I2 (B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.8e-08 Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 0
BLAST of Csor.00g190480 vs. ExPASy Swiss-Prot
Match: Q9LUA9 (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 6.2e-08 Identity = 30/70 (42.86%), Postives = 39/70 (55.71%), Query Frame = 0
BLAST of Csor.00g190480 vs. ExPASy Swiss-Prot
Match: Q9SSE5 (Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 6.2e-08 Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 0
BLAST of Csor.00g190480 vs. ExPASy Swiss-Prot
Match: Q9LRM4 (B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 8.1e-08 Identity = 27/52 (51.92%), Postives = 33/52 (63.46%), Query Frame = 0
BLAST of Csor.00g190480 vs. NCBI nr
Match: KAG6607840.1 (B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015238.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 546 bits (1408), Expect = 8.30e-196 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of Csor.00g190480 vs. NCBI nr
Match: XP_022941291.1 (histone H3.v1-like [Cucurbita moschata]) HSP 1 Score: 526 bits (1355), Expect = 9.96e-188 Identity = 274/282 (97.16%), Postives = 276/282 (97.87%), Query Frame = 0
BLAST of Csor.00g190480 vs. NCBI nr
Match: XP_022981574.1 (histone H3.v1-like [Cucurbita maxima]) HSP 1 Score: 517 bits (1332), Expect = 3.07e-184 Identity = 270/282 (95.74%), Postives = 274/282 (97.16%), Query Frame = 0
BLAST of Csor.00g190480 vs. NCBI nr
Match: XP_022936446.1 (protein BFR2 [Cucurbita moschata]) HSP 1 Score: 438 bits (1126), Expect = 7.97e-153 Identity = 231/283 (81.63%), Postives = 252/283 (89.05%), Query Frame = 0
BLAST of Csor.00g190480 vs. NCBI nr
Match: XP_023535120.1 (protein BFR2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 436 bits (1122), Expect = 2.81e-152 Identity = 230/283 (81.27%), Postives = 250/283 (88.34%), Query Frame = 0
BLAST of Csor.00g190480 vs. ExPASy TrEMBL
Match: A0A6J1FKQ3 (histone H3.v1-like OS=Cucurbita moschata OX=3662 GN=LOC111446633 PE=4 SV=1) HSP 1 Score: 526 bits (1355), Expect = 4.82e-188 Identity = 274/282 (97.16%), Postives = 276/282 (97.87%), Query Frame = 0
BLAST of Csor.00g190480 vs. ExPASy TrEMBL
Match: A0A6J1J288 (histone H3.v1-like OS=Cucurbita maxima OX=3661 GN=LOC111480652 PE=4 SV=1) HSP 1 Score: 517 bits (1332), Expect = 1.49e-184 Identity = 270/282 (95.74%), Postives = 274/282 (97.16%), Query Frame = 0
BLAST of Csor.00g190480 vs. ExPASy TrEMBL
Match: A0A6J1F7H6 (protein BFR2 OS=Cucurbita moschata OX=3662 GN=LOC111443061 PE=4 SV=1) HSP 1 Score: 438 bits (1126), Expect = 3.86e-153 Identity = 231/283 (81.63%), Postives = 252/283 (89.05%), Query Frame = 0
BLAST of Csor.00g190480 vs. ExPASy TrEMBL
Match: A0A6J1CD44 (protein BFR2 OS=Momordica charantia OX=3673 GN=LOC111010576 PE=4 SV=1) HSP 1 Score: 426 bits (1096), Expect = 1.37e-148 Identity = 227/282 (80.50%), Postives = 249/282 (88.30%), Query Frame = 0
BLAST of Csor.00g190480 vs. ExPASy TrEMBL
Match: A0A6J1IMI6 (protein BFR2 OS=Cucurbita maxima OX=3661 GN=LOC111476916 PE=4 SV=1) HSP 1 Score: 423 bits (1087), Expect = 2.90e-147 Identity = 224/282 (79.43%), Postives = 246/282 (87.23%), Query Frame = 0
BLAST of Csor.00g190480 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein ) HSP 1 Score: 143.7 bits (361), Expect = 2.3e-34 Identity = 101/207 (48.79%), Postives = 130/207 (62.80%), Query Frame = 0
BLAST of Csor.00g190480 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein ) HSP 1 Score: 119.0 bits (297), Expect = 6.1e-27 Identity = 86/191 (45.03%), Postives = 109/191 (57.07%), Query Frame = 0
BLAST of Csor.00g190480 vs. TAIR 10
Match: AT4G15250.1 (B-box type zinc finger protein with CCT domain ) HSP 1 Score: 61.2 bits (147), Expect = 1.5e-09 Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 0
BLAST of Csor.00g190480 vs. TAIR 10
Match: AT4G15248.1 (B-box type zinc finger family protein ) HSP 1 Score: 60.8 bits (146), Expect = 2.0e-09 Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 0
BLAST of Csor.00g190480 vs. TAIR 10
Match: AT3G07650.1 (CONSTANS-like 9 ) HSP 1 Score: 59.7 bits (143), Expect = 4.4e-09 Identity = 29/70 (41.43%), Postives = 40/70 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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