Csor.00g190310 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g190310
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Splicing factor YJU2
Location	Csor_Chr16: 9478907 .. 9481684 (-)
RNA-Seq Expression	Csor.00g190310
Synteny	Csor.00g190310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAGAGGAAGGTGCTCAACAAATACTATCCACCGGATTTTGATCCATCAAAGCTACCAAGGGTTCGTAGGCCCAAAAACCAACAAATGAACGTCCGTATGATGCTTCCTATGAGTATCCGGTGCAATACTTGTGGTAATTACATATACAAGGGCACCAAGTTTAATTCCCGCAAGGAGGACGTCATTGGCGAGGCAAGAGAATCCCTTTCTTATTTTTTTTCTTTTTGACTTGTTTATTCTTTTTGAAATTAATTTTCTCATGGATTTCTTTTCTCTTTAGACATATTTGGGAATCCAATTGTTTAGATTCTACTTCAAATGTACTCGATGTTCGGCTGAGCTCACCATCAAAACAGACCCCAAAAATTCAGATTATACTGTAGAATCTGGTGCCACTCGTAATTTTGAACCATGGCGTGATGAAGATGAAGCTTCAGAAAAGGAGAAACACAAAAGGAATGCTGAAGAGATGGGGGACCCAATGAAATCCTTGGAGAATAGAACCTTGGATTCTAAGCGCGAAATGGACATCCTTGCTGCTTTGGATGAGATGAAATCTATGAAGGTTTGCTTTTTTTTTTTTTTTTTTATTACCCTTTGTTTTGTCATTACGATTCTTGGTTTATGATTTTTCTTGTAGTTGTGGCTTTGAACAACAAATATTTATTCTAATTTGTTTTGATTTTTTACATTCTGCAGTCCAGACATGCAACTGTGAGTATTGATTCAATGCTTATGGCTTTGCAACAAACTGCTGCCGAGAAGGTATGGATATCACTGCCTTCAAGAAATCATCTTGACATGAAATATATGAGAAATAGCATTGAAAAAGAGAACATAGATTCTATCTCTTTTGATTTAGGGTGTAATTTTAACTATTTTGATAAATGTTTACTTCCCAGGAAAAGAAGTTAGAGGAAGAGGATGAGGCGTTGATAAAATCAATTGTCTTCAATGTGAGTTCATTGTTTCTGTGTGTTTTCCCTCTTCCATTTATAGTTATTTCTTTTGGTTTCCTTTTTCAAGGAGTTACAAATTTTAATATGCGTTTATCACTACTCCTGTGTAGAAATCAAACAATTATGTTAGAAGAATTTCGGACGATGAATTTGATGATAACAATCATTTTGTACAACATTCGACCAACAATGATGAAACATTTGACTTTCGTGCAAAGGTAAGTGAAGTTATTTTTTAATCCTTATAAATATGCAGAGTGGATGAATAGTGATAAATTTGCAAGCCAGATAGGGTCTGAGAATCTCAACTATTTAGCTCATTCTTAGCTTCTTGACATGGAAGCTAGTTGTGCAGTTTTTAATTGATATCTAGAGAATTTTGACTTCACCTTTTCTCATTAGCATTTCTACCTAATTGGATTGCAGAAGCAAAAGATTTCTGAAGAATTTCCTCATGACCCTACCAATACTTCAACGAAAGCTGCTGTTCTCCATGCCCTCACGGGTGAAGGTAACCCCACTTTTTATTTTTATTCTATCCAATGTTCTAAAGAATGGATCTTGTGCGAATAGATTATGATACTAAATCTTTAATTGATTTGCCCCTCCTCTCAATATATTAAGAAAACAATCAATCTGCAATTGTTACAATTTTTGCTGCACCTTTCTTGAGATACTCGGGCCCTTAAACTTTGCCTTGCACCCCACATCGAAGGGTGTATGGCATATCTGCTCACGATAATCCTATGCAATAAAGTATTAGGCTCTAAGAACCCCCACAACCAACCATTATCCAGTGTAGCTTCAGTAGATAAAGCATAGAGATTAACCGACCTAATGCAATTTCATATCCACGATCTCTATTTCCATCCAGAACTCTTCTTCTCCAAGACTTAATCCACCAAGTCTCTATCAACATAATCACACGCTTTCACAATTGCTCTTAAATAACTCCTTCCTCCTTGTAAACCTATAATCCATGGCTTCATTGATGATGGGTACTTGATCAAAAAAAAAAAAAAAAAAAAAATTCCTACCTGTAACAAAGACTATTGGGAAATTGTAATGGTCCAGGCCCACTCCAGATATTGTCCTCTTTGGACTTTCCTTCAAGGTTTTTAAAACATGTCTCCTAGGAAGAGGTTTCCACACCCTTAGAAGGCTGTTTCGTTCTCCTCCCCAACTGATGTGGGATCTCACATAAATAGAAATCATGCGGGGAAGGACTTTCCTCGACTTTTCTCAGACTATCTACCCTAGGTCTTCGCAGTGATCTTATAACCTGAAACAAGGGTTGTAAGCAGAAAATCTTTCTCATCCTAAACTCCTTATGTGTTAAGGAGGGCTAAGGTGGGGAATGGCTAAGAAGTGGTTAATATGGGGCAAGTTTTTGGGATTGTGCGTGAGAGTTTGGTTTGTGGAGGGAGAGGTTTATGTACGTGTTTTGAGAGACTGTTTTTGGTAGGTATTTTGTTGTGGCCTTGTGTCTAGAGAAGGAGAGTACCATCCCTTTAATAGATATATAATTGCGTCTCATTAACAAATTGAATGCTCAAATTTTGATGTATTTGCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGCTTACTGTGCAGGAAGCGATGGCAACGTTGGCACCTCTAGTGTTTCGAAGTTTGTTTCTAAATCTTTGCCAGTTAGGGTTTCTATTATAAAGAAACCAGAATTGACTGCTCGGGTGGAGAATAAACAGAGCTTGGAAGTTCAAACCAGTGATACGAACACTGGACTCGAGTCCTTGTGCCAATACTATGCCAGTGATGAGGACTGA

mRNA sequence

ATGGGAGAGAGGAAGGTGCTCAACAAATACTATCCACCGGATTTTGATCCATCAAAGCTACCAAGGGTTCGTAGGCCCAAAAACCAACAAATGAACGTCCGTATGATGCTTCCTATGAGTATCCGGTGCAATACTTGTGGTAATTACATATACAAGGGCACCAAGTTTAATTCCCGCAAGGAGGACGTCATTGGCGAGACATATTTGGGAATCCAATTGTTTAGATTCTACTTCAAATGTACTCGATGTTCGGCTGAGCTCACCATCAAAACAGACCCCAAAAATTCAGATTATACTGTAGAATCTGGTGCCACTCGTAATTTTGAACCATGGCGTGATGAAGATGAAGCTTCAGAAAAGGAGAAACACAAAAGGAATGCTGAAGAGATGGGGGACCCAATGAAATCCTTGGAGAATAGAACCTTGGATTCTAAGCGCGAAATGGACATCCTTGCTGCTTTGGATGAGATGAAATCTATGAAGTCCAGACATGCAACTGTGAGTATTGATTCAATGCTTATGGCTTTGCAACAAACTGCTGCCGAGAAGGAAAAGAAGTTAGAGGAAGAGGATGAGGCGTTGATAAAATCAATTGTCTTCAATAAATCAAACAATTATGTTAGAAGAATTTCGGACGATGAATTTGATGATAACAATCATTTTGTACAACATTCGACCAACAATGATGAAACATTTGACTTTCGTGCAAAGAAGCAAAAGATTTCTGAAGAATTTCCTCATGACCCTACCAATACTTCAACGAAAGCTGCTGTTCTCCATGCCCTCACGGGTGAAGGAAGCGATGGCAACGTTGGCACCTCTAGTGTTTCGAAGTTTGTTTCTAAATCTTTGCCAGTTAGGGTTTCTATTATAAAGAAACCAGAATTGACTGCTCGGGTGGAGAATAAACAGAGCTTGGAAGTTCAAACCAGTGATACGAACACTGGACTCGAGTCCTTGTGCCAATACTATGCCAGTGATGAGGACTGA

Coding sequence (CDS)

ATGGGAGAGAGGAAGGTGCTCAACAAATACTATCCACCGGATTTTGATCCATCAAAGCTACCAAGGGTTCGTAGGCCCAAAAACCAACAAATGAACGTCCGTATGATGCTTCCTATGAGTATCCGGTGCAATACTTGTGGTAATTACATATACAAGGGCACCAAGTTTAATTCCCGCAAGGAGGACGTCATTGGCGAGACATATTTGGGAATCCAATTGTTTAGATTCTACTTCAAATGTACTCGATGTTCGGCTGAGCTCACCATCAAAACAGACCCCAAAAATTCAGATTATACTGTAGAATCTGGTGCCACTCGTAATTTTGAACCATGGCGTGATGAAGATGAAGCTTCAGAAAAGGAGAAACACAAAAGGAATGCTGAAGAGATGGGGGACCCAATGAAATCCTTGGAGAATAGAACCTTGGATTCTAAGCGCGAAATGGACATCCTTGCTGCTTTGGATGAGATGAAATCTATGAAGTCCAGACATGCAACTGTGAGTATTGATTCAATGCTTATGGCTTTGCAACAAACTGCTGCCGAGAAGGAAAAGAAGTTAGAGGAAGAGGATGAGGCGTTGATAAAATCAATTGTCTTCAATAAATCAAACAATTATGTTAGAAGAATTTCGGACGATGAATTTGATGATAACAATCATTTTGTACAACATTCGACCAACAATGATGAAACATTTGACTTTCGTGCAAAGAAGCAAAAGATTTCTGAAGAATTTCCTCATGACCCTACCAATACTTCAACGAAAGCTGCTGTTCTCCATGCCCTCACGGGTGAAGGAAGCGATGGCAACGTTGGCACCTCTAGTGTTTCGAAGTTTGTTTCTAAATCTTTGCCAGTTAGGGTTTCTATTATAAAGAAACCAGAATTGACTGCTCGGGTGGAGAATAAACAGAGCTTGGAAGTTCAAACCAGTGATACGAACACTGGACTCGAGTCCTTGTGCCAATACTATGCCAGTGATGAGGACTGA

Protein sequence

MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTAAEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQKISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARVENKQSLEVQTSDTNTGLESLCQYYASDED

Homology

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BLAST of Csor.00g190310 vs. ExPASy Swiss-Prot
Match: Q54WR5 (Splicing factor YJU2 OS=Dictyostelium discoideum OX=44689 GN=yju2 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.4e-56
Identity = 134/335 (40.00%), Postives = 201/335 (60.00%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKV++KYYPPDFDPSK+ +++  +     V  MLPMSIRCNTCG YI +GTKFN++K
Sbjct: 1   MGERKVISKYYPPDFDPSKVAKIKVKRPTFTKVTTMLPMSIRCNTCGEYIGRGTKFNAKK 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           E V  E YLGI+++RF+ +C +C+AELTIKTDPKNS+Y  ESGATRN+EPW++ DE    
Sbjct: 61  ETVQNEDYLGIKIYRFFLRCKKCAAELTIKTDPKNSEYVCESGATRNYEPWKETDEEKSN 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
              K   EE  D M +LENRTL+SKREM++L AL+E+KS+ SR++ +  + +L    Q  
Sbjct: 121 RMTKEQEEEQ-DAMIALENRTLESKREMEMLDALEEIKSLNSRNSEIDTEQLLEYNLQKQ 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNN---HFVQHSTNNDETFDFRAK 240
             +EK  +EED+ L+KSI  NK+   + +I+D+   +NN   + ++   N+D+  D    
Sbjct: 181 ELEEKLQDEEDDLLVKSIFNNKNKLELNQINDNNSINNNIDSNKIKRIENDDDDGD---- 240

Query: 241 KQKISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT 300
             K +  F ++  N      +++      ++ N+ T+S+S  +  +              
Sbjct: 241 --KFNSLFSNNNKNNKN---IIN--NNNNNNNNINTTSISNTIETTPTTNQKTSILGNKV 300

Query: 301 ARVENKQSLEVQTSDTNT---GLESLCQYYASDED 330
             V NKQ   +  ++ N+      S    Y+ DE+
Sbjct: 301 KVVINKQEEPIPKNNNNSEPNSFSSFMSAYSDDEE 323

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BLAST of Csor.00g190310 vs. ExPASy Swiss-Prot
Match: Q9BW85 (Splicing factor YJU2 OS=Homo sapiens OX=9606 GN=YJU2 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 7.9e-55
Identity = 108/214 (50.47%), Postives = 149/214 (69.63%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RK
Sbjct: 1   MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           E V  E YLG+ +FRFY KCTRC AE+T KTDP+N+DYT+E GATRNF+  +  +E  ++
Sbjct: 61  ETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKR 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
            + +R  EE+ +PMK LENRT DSK EM++L  L E+K +  R A V  ++ML   + + 
Sbjct: 121 VQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHRLSE 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDE 215
            E+ ++ +EEDE    +++       +   SD E
Sbjct: 181 EERRRQQQEEDEQETAALLEEARKRRLLEDSDSE 214

[Close]

BLAST of Csor.00g190310 vs. ExPASy Swiss-Prot
Match: Q9D6J3 (Splicing factor YJU2 OS=Mus musculus OX=10090 GN=Yju2 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.0e-54
Identity = 109/217 (50.23%), Postives = 153/217 (70.51%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RK
Sbjct: 1   MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           E V  E YLG+ +FRFY KCTRC AE+T KTDP+N+DYT+E GATRNF+  +  +E  ++
Sbjct: 61  ETVQNEAYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKR 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
            + +R  EE+ +PMK LENRT DSK EM++L  L E+K +  R A V  ++ML   + + 
Sbjct: 121 VQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHRMSQ 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDD 218
            + +++ EEEDE    +++  +   + R + D E +D
Sbjct: 181 EQWQQQQEEEDERETAALL--EEARHRRLLEDSESED 215

[Close]

BLAST of Csor.00g190310 vs. ExPASy Swiss-Prot
Match: A8WHR3 (Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.0e-54
Identity = 131/298 (43.96%), Postives = 183/298 (61.41%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RK
Sbjct: 1   MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARK 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           E V  E YLG+ +FRFY KCTRC AE+T KTDP+N+DY +E GATRNF+  +  +E  +K
Sbjct: 61  ETVQNELYLGLPIFRFYIKCTRCLAEITFKTDPENTDYAMEHGATRNFQAEKLIEEEEKK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
            + +R  EE+ +PMK LENRT DSK EM++L  L E+K +  R A V  + ML   ++  
Sbjct: 121 IQQEREDEELNNPMKVLENRTRDSKLEMEVLENLQELKELNQRQAQVDFEGMLGQYKELE 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240
             ++++ +EEDE   K ++       V+R+ D            S + +E  + + + +K
Sbjct: 181 QRQKQREQEEDEQETKEML---ERALVKRLRD------------SDSEEEAENAKERSKK 240

Query: 241 ISEEFPHD--PTNTSTKAAVLHALTG--EGSDGNVGTSSVSKFVSKSLPVRVSIIKKP 295
              + P D   T+TST +  L +     +  D +VG  SV K    SL VR    KKP
Sbjct: 241 HIADKPTDILTTDTSTSSQGLSSAVAKKQSWDRSVGGLSV-KGALGSLVVR----KKP 278

[Close]

BLAST of Csor.00g190310 vs. ExPASy Swiss-Prot
Match: Q9P7C5 (Splicing factor YJU2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cwf16 PE=1 SV=2)

HSP 1 Score: 184.9 bits (468), Expect = 1.5e-45
Identity = 103/226 (45.58%), Postives = 144/226 (63.72%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQ-----QMNVRMMLPMSIRCNTCGNYIYKGTK 60
           M ERKVLNKY PPD+DPS  P  ++ K Q     ++ VR+M P S+RC+TCG YIYKG K
Sbjct: 1   MSERKVLNKYIPPDYDPSIRPPKKKKKFQGPNGGKLTVRLMTPFSMRCHTCGEYIYKGKK 60

Query: 61  FNSRKEDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDE- 120
           FN+RKE   GE Y  I + RFY +CTRC+AE+T  TDPK++DY  ESGA+RN+EPW ++ 
Sbjct: 61  FNARKEKT-GEKYFSIDILRFYIRCTRCAAEITFITDPKHADYAAESGASRNYEPWHEKR 120

Query: 121 -DEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML 180
             E  E E  +RN     D M+ LE +TLD+KR+M I  ALDE++   +R + V+ID  +
Sbjct: 121 LQEYEENELAERNDIPEEDEMEKLEQKTLDTKRQMQISDALDELREKSARRSRVNIDDAI 180

Query: 181 MALQQTA--------AEKEKKLEEEDEALIKSIVFNKSNNYVRRIS 212
             L++ A        ++K K  EEE +   KS+  ++    +RR++
Sbjct: 181 ALLKEDAYGSIEEEESKKRKFEEEEIDREAKSLFSSQDGEIIRRLN 225

[Close]

BLAST of Csor.00g190310 vs. NCBI nr
Match: KAG6577830.1 (Splicing factor YJU2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 641 bits (1653), Expect = 1.43e-231
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK
Sbjct: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
           EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240
           AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240

Query: 241 ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300
           ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV
Sbjct: 241 ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

Query: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329
           ENKQSLEVQTSDTNTGLESLCQYYASDED
Sbjct: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329

[Close]

BLAST of Csor.00g190310 vs. NCBI nr
Match: XP_023552633.1 (coiled-coil domain-containing protein 94 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 639 bits (1647), Expect = 1.18e-230
Identity = 328/329 (99.70%), Postives = 328/329 (99.70%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK
Sbjct: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
           EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240
           AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240

Query: 241 ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300
           ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV
Sbjct: 241 ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

Query: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329
           ENKQSLEVQ SDTNTGLESLCQYYASDED
Sbjct: 301 ENKQSLEVQPSDTNTGLESLCQYYASDED 329

[Close]

BLAST of Csor.00g190310 vs. NCBI nr
Match: XP_022923549.1 (coiled-coil domain-containing protein 94 homolog [Cucurbita moschata])

HSP 1 Score: 636 bits (1640), Expect = 1.37e-229
Identity = 327/329 (99.39%), Postives = 328/329 (99.70%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK
Sbjct: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
           EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML ALQQTA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240
           AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240

Query: 241 ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300
           ISEEFPHDPTNTSTKAAVL+ALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV
Sbjct: 241 ISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

Query: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329
           ENKQSLEVQTSDTNTGLESLCQYYASDED
Sbjct: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329

[Close]

BLAST of Csor.00g190310 vs. NCBI nr
Match: XP_022965295.1 (coiled-coil domain-containing protein 94 homolog [Cucurbita maxima] >XP_022965296.1 coiled-coil domain-containing protein 94 homolog [Cucurbita maxima])

HSP 1 Score: 631 bits (1627), Expect = 1.32e-227
Identity = 324/329 (98.48%), Postives = 326/329 (99.09%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK
Sbjct: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
           EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQQTA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240
           AEKEKKLEEEDEALIKSIVFN SNNYVRRISDDEFDDNNHFVQHST+NDETFDFRAKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVRRISDDEFDDNNHFVQHSTSNDETFDFRAKKQK 240

Query: 241 ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300
           ISEEFPHDPTNTSTKAAVLHAL GEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV
Sbjct: 241 ISEEFPHDPTNTSTKAAVLHALKGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

Query: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329
           ENKQSLEVQ SDTNTGLESLCQYYASDED
Sbjct: 301 ENKQSLEVQISDTNTGLESLCQYYASDED 329

[Close]

BLAST of Csor.00g190310 vs. NCBI nr
Match: KAG7015867.1 (Coiled-coil domain-containing protein 94-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 628 bits (1619), Expect = 1.88e-226
Identity = 325/329 (98.78%), Postives = 325/329 (98.78%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           ED    TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK
Sbjct: 61  ED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
           EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240
           AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240

Query: 241 ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300
           ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV
Sbjct: 241 ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

Query: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329
           ENKQSLEVQTSDTNTGLESLCQYYASDED
Sbjct: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 325

[Close]

BLAST of Csor.00g190310 vs. ExPASy TrEMBL
Match: A0A6J1E6Q8 (Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111431206 PE=3 SV=1)

HSP 1 Score: 636 bits (1640), Expect = 6.65e-230
Identity = 327/329 (99.39%), Postives = 328/329 (99.70%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK
Sbjct: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
           EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML ALQQTA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240
           AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240

Query: 241 ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300
           ISEEFPHDPTNTSTKAAVL+ALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV
Sbjct: 241 ISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

Query: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329
           ENKQSLEVQTSDTNTGLESLCQYYASDED
Sbjct: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329

[Close]

BLAST of Csor.00g190310 vs. ExPASy TrEMBL
Match: A0A6J1HNB0 (Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111465203 PE=3 SV=1)

HSP 1 Score: 631 bits (1627), Expect = 6.37e-228
Identity = 324/329 (98.48%), Postives = 326/329 (99.09%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK
Sbjct: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
           EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQQTA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLVALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240
           AEKEKKLEEEDEALIKSIVFN SNNYVRRISDDEFDDNNHFVQHST+NDETFDFRAKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVRRISDDEFDDNNHFVQHSTSNDETFDFRAKKQK 240

Query: 241 ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300
           ISEEFPHDPTNTSTKAAVLHAL GEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV
Sbjct: 241 ISEEFPHDPTNTSTKAAVLHALKGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300

Query: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329
           ENKQSLEVQ SDTNTGLESLCQYYASDED
Sbjct: 301 ENKQSLEVQISDTNTGLESLCQYYASDED 329

[Close]

BLAST of Csor.00g190310 vs. ExPASy TrEMBL
Match: A0A6J1EW00 (Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111438528 PE=3 SV=1)

HSP 1 Score: 539 bits (1389), Expect = 1.17e-191
Identity = 277/329 (84.19%), Postives = 297/329 (90.27%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+ VRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           EDV+GETYLGIQLFRFYFKCTRCSAELTIKTDP+NSDY VESGATRNFEPWR+EDE SEK
Sbjct: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
           EKHKR+AEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQQTA
Sbjct: 121 EKHKRSAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240
           AEKEKKLEEEDEALIKSIVFN SNNYV+RISDD+FDD++   Q STNND+T +  AKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVKRISDDQFDDSSPSEQPSTNNDKTSNINAKKQK 240

Query: 241 ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300
           +SEE PHD   T+TK A+LH+LTGEG DGN  TS  +K +SKSL ++VSIIKKPELT RV
Sbjct: 241 LSEESPHDDPTTTTKDAILHSLTGEGGDGNGATSGDAKLISKSLSIKVSIIKKPELTPRV 300

Query: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329
           E KQ LEVQ  DTN GLESLCQ Y SDED
Sbjct: 301 ETKQKLEVQIGDTNNGLESLCQNYGSDED 329

[Close]

BLAST of Csor.00g190310 vs. ExPASy TrEMBL
Match: A0A6J1HYT1 (Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111469322 PE=3 SV=1)

HSP 1 Score: 538 bits (1386), Expect = 3.34e-191
Identity = 277/329 (84.19%), Postives = 296/329 (89.97%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+ VRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           EDV+GETYLGIQLFRFYFKCTRCSAELTIKTDP+NSDY VESGATRNFEPWR+EDE SEK
Sbjct: 61  EDVVGETYLGIQLFRFYFKCTRCSAELTIKTDPQNSDYIVESGATRNFEPWREEDEVSEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
           EKHKRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML+ALQQTA
Sbjct: 121 EKHKRNAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLLALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240
           AEKEKKLEEEDEALIKSIVFN SNNYVRRISDD+FD ++   Q STNND+T +  AKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSNNYVRRISDDQFDGSSPSEQPSTNNDKTSNINAKKQK 240

Query: 241 ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300
           +SEE PHD   T+ K  +LH+LTGEG DGN  TSS +KF+SKSL ++VSIIKKPELT RV
Sbjct: 241 LSEESPHDDPTTTPKDVILHSLTGEGGDGNGATSSDAKFISKSLSIKVSIIKKPELTPRV 300

Query: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329
           E KQ LEVQ  DTN GLESLCQ Y S+ED
Sbjct: 301 ETKQKLEVQIGDTNNGLESLCQNYGSEED 329

[Close]

BLAST of Csor.00g190310 vs. ExPASy TrEMBL
Match: A0A6J1E3A4 (Splicing factor YJU2 OS=Momordica charantia OX=3673 GN=LOC111025649 PE=3 SV=1)

HSP 1 Score: 528 bits (1359), Expect = 3.23e-187
Identity = 276/329 (83.89%), Postives = 296/329 (89.97%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+ VRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           EDVIGETYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY VESGATRNFEPWR+EDEASEK
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTIKTDPQNSDYVVESGATRNFEPWREEDEASEK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
           EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA
Sbjct: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240
           AEKEKKLEEEDEALIKSIVFN S +YVRRI DDEFDD +HFV   TNND+T    AKKQK
Sbjct: 181 AEKEKKLEEEDEALIKSIVFNNSKDYVRRIPDDEFDDGSHFV---TNNDKTSGTSAKKQK 240

Query: 241 ISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARV 300
           + EE PHDPT+TSTKA +L++LT EG+D +VGTS  ++FVSKSL ++VSIIKKPELT  V
Sbjct: 241 VLEESPHDPTSTSTKAVILNSLTDEGNDSSVGTSDDARFVSKSLSIKVSIIKKPELTNPV 300

Query: 301 ENKQSLEVQTSDTNTGLESLCQYYASDED 329
           +N+Q     T D NTGL SLCQ Y SDED
Sbjct: 301 DNEQ-----TEDMNTGLLSLCQNYVSDED 321

[Close]

BLAST of Csor.00g190310 vs. TAIR 10
Match: AT1G17130.1 (Family of unknown function (DUF572) )

HSP 1 Score: 363.6 bits (932), Expect = 1.7e-100
Identity = 207/342 (60.53%), Postives = 252/342 (73.68%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDP+KL R+RRPKNQQ+ VRMMLPMS+RC TCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPAKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           EDVIGETYLGIQ+FRFYFKCT+CSAELT+KTDP+NSDY VESGA+RN+EPWR EDE  +K
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGASRNYEPWRAEDEEVDK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
           +K KR+AEEMGD MKSLENRTLDSKREMDI+AALDEMKSMKSRHATVS+D+ML ALQ+T 
Sbjct: 121 DKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMKSRHATVSVDAMLEALQRTG 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDN------NHFVQHSTNNDETFDF 240
           AEK K++EEEDEA+IKSI F K    +RRI+D+E DD+      + +         +   
Sbjct: 181 AEKVKRIEEEDEAVIKSI-FGKQKEVIRRIADEEIDDDYDDDDIDDYPSLQKEKKGSSSD 240

Query: 241 RAKKQKISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKP 300
            +KK+K +E  P +PT+  T ++  +    +         ++SK   KS+ ++V I K+P
Sbjct: 241 LSKKRKATEVSPSNPTDILTSSSAENPKEPK-------KQAISKQPFKSVHIKV-IKKQP 300

Query: 301 ELT-------ARVENKQSLEVQTSDTNTGLESLCQYYASDED 330
           + T       A+ E K+S        NT L SL Q Y SDED
Sbjct: 301 QPTSSSTPAPAKPEEKKS----DGAANTSLASLFQNYGSDED 329

[Close]

BLAST of Csor.00g190310 vs. TAIR 10
Match: AT1G17130.2 (Family of unknown function (DUF572) )

HSP 1 Score: 356.7 bits (914), Expect = 2.0e-98
Identity = 207/349 (59.31%), Postives = 252/349 (72.21%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDP+KL R+RRPKNQQ+ VRMMLPMS+RC TCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPAKLQRLRRPKNQQIKVRMMLPMSVRCGTCGNYIYKGTKFNSRK 60

Query: 61  EDVIGE-------TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRD 120
           EDVIGE       TYLGIQ+FRFYFKCT+CSAELT+KTDP+NSDY VESGA+RN+EPWR 
Sbjct: 61  EDVIGENFSFDVQTYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGASRNYEPWRA 120

Query: 121 EDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML 180
           EDE  +K+K KR+AEEMGD MKSLENRTLDSKREMDI+AALDEMKSMKSRHATVS+D+ML
Sbjct: 121 EDEEVDKDKQKRDAEEMGDAMKSLENRTLDSKREMDIIAALDEMKSMKSRHATVSVDAML 180

Query: 181 MALQQTAAEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDN------NHFVQHSTN 240
            ALQ+T AEK K++EEEDEA+IKSI F K    +RRI+D+E DD+      + +      
Sbjct: 181 EALQRTGAEKVKRIEEEDEAVIKSI-FGKQKEVIRRIADEEIDDDYDDDDIDDYPSLQKE 240

Query: 241 NDETFDFRAKKQKISEEFPHDPTNTSTKAAVLHALTGEGSDGNVGTSSVSKFVSKSLPVR 300
              +    +KK+K +E  P +PT+  T ++  +    +         ++SK   KS+ ++
Sbjct: 241 KKGSSSDLSKKRKATEVSPSNPTDILTSSSAENPKEPK-------KQAISKQPFKSVHIK 300

Query: 301 VSIIKKPELT-------ARVENKQSLEVQTSDTNTGLESLCQYYASDED 330
           V I K+P+ T       A+ E K+S        NT L SL Q Y SDED
Sbjct: 301 V-IKKQPQPTSSSTPAPAKPEEKKS----DGAANTSLASLFQNYGSDED 336

[Close]

BLAST of Csor.00g190310 vs. TAIR 10
Match: AT2G32050.1 (Family of unknown function (DUF572) )

HSP 1 Score: 241.5 bits (615), Expect = 9.5e-64
Identity = 126/217 (58.06%), Postives = 160/217 (73.73%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERK LNKYYPP+FDP ++PR+R+PKNQQ  +R M+P+ IRCNTCGNY+ +GTK N R+
Sbjct: 1   MGERKGLNKYYPPNFDPKQIPRIRKPKNQQRKIRSMVPLRIRCNTCGNYMSEGTKINCRE 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           E+VIGETYLGI++ RFYFKC++C  EL +KTDPKNS Y  ESGAT  ++   +E++    
Sbjct: 61  ENVIGETYLGIKIHRFYFKCSKCCTELILKTDPKNSSYVAESGATCVYDQHEEEEQ---- 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
                 AE+ GD M SLE RTL SKRE+D++AALDEMKSMKSR  +VS+DSML  L +  
Sbjct: 121 ------AEDGGDRMSSLEKRTLVSKREVDVMAALDEMKSMKSRRVSVSVDSMLEDLSKRH 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDD 218
            E+E+  +EED ALIKS  F K     RRI D+E D+
Sbjct: 181 KEEEEVAKEEDAALIKSTKFGKQ----RRIVDEETDE 203

[Close]

BLAST of Csor.00g190310 vs. TAIR 10
Match: AT3G43250.1 (Family of unknown function (DUF572) )

HSP 1 Score: 228.4 bits (581), Expect = 8.3e-60
Identity = 130/240 (54.17%), Postives = 168/240 (70.00%), Query Frame = 0


Query: 1   MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERK LNKYYPPDFDP K+ R+++PKNQQ  +R MLP+ +RCNTCGNY+ +GTKFN R+
Sbjct: 1   MGERKNLNKYYPPDFDPKKIHRIKKPKNQQKKIRFMLPVRVRCNTCGNYMSEGTKFNCRQ 60

Query: 61  EDVIGETYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDEDEASEK 120
           EDVI ETYLG+++ RFY KCT+C AELTIKTDPKN  YTVESGA+  +    D +E  EK
Sbjct: 61  EDVITETYLGLKIHRFYIKCTKCLAELTIKTDPKNHSYTVESGASCLYNGHEDIEE--EK 120

Query: 121 EKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLMALQQTA 180
           +K   NA      ++SLENRT+ SKRE++++A+LDE+KSMKSR A++S+D ML  L +  
Sbjct: 121 KKKHENA------LESLENRTVVSKREIEVMASLDELKSMKSRRASLSVDYMLEDLSRRK 180

Query: 181 AEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKKQK 240
            ++E+ +EE  E LIKSI F K      RI  DE    N+         E FD + KK+K
Sbjct: 181 KQEEENVEE--ELLIKSIKFGK------RIRTDEEKKKNY---------EAFDEKKKKKK 215

[Close]

BLAST of Csor.00g190310 vs. TAIR 10
Match: AT2G29430.1 (Family of unknown function (DUF572) )

HSP 1 Score: 102.1 bits (253), Expect = 9.0e-22
Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 32  NVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVIGETYLGIQLFRFYFKCTRCSAELTIKT 91
           N  + LPM ++CN C N + KGTKF SR EDVIGETYLGI++FRF  +CT  S E+  +T
Sbjct: 5   NADLSLPMRLQCNNCDNIMSKGTKFTSRVEDVIGETYLGIKIFRFQIQCTNGSHEMKFRT 64

Query: 92  DPKNSDYTVESGATRNFEP 111
           DPKN+D+ +ESGATR   P
Sbjct: 65  DPKNADFIIESGATRLLLP 83

The following BLAST results are available for this feature:

BLAST of Csor.00g190310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54WR5	1.4e-56	40.00	Splicing factor YJU2 OS=Dictyostelium discoideum OX=44689 GN=yju2 PE=3 SV=1	[more]
Q9BW85	7.9e-55	50.47	Splicing factor YJU2 OS=Homo sapiens OX=9606 GN=YJU2 PE=1 SV=1	[more]
Q9D6J3	1.0e-54	50.23	Splicing factor YJU2 OS=Mus musculus OX=10090 GN=Yju2 PE=1 SV=1	[more]
A8WHR3	3.0e-54	43.96	Splicing factor YJU2 OS=Danio rerio OX=7955 GN=yju2 PE=1 SV=1	[more]
Q9P7C5	1.5e-45	45.58	Splicing factor YJU2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2...	[more]

BLAST of Csor.00g190310 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577830.1	1.43e-231	100.00	Splicing factor YJU2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023552633.1	1.18e-230	99.70	coiled-coil domain-containing protein 94 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022923549.1	1.37e-229	99.39	coiled-coil domain-containing protein 94 homolog [Cucurbita moschata]	[more]
XP_022965295.1	1.32e-227	98.48	coiled-coil domain-containing protein 94 homolog [Cucurbita maxima] >XP_02296529...	[more]
KAG7015867.1	1.88e-226	98.78	Coiled-coil domain-containing protein 94-like protein, partial [Cucurbita argyro...	[more]

BLAST of Csor.00g190310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6Q8	6.65e-230	99.39	Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111431206 PE=3 SV=1	[more]
A0A6J1HNB0	6.37e-228	98.48	Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111465203 PE=3 SV=1	[more]
A0A6J1EW00	1.17e-191	84.19	Splicing factor YJU2 OS=Cucurbita moschata OX=3662 GN=LOC111438528 PE=3 SV=1	[more]
A0A6J1HYT1	3.34e-191	84.19	Splicing factor YJU2 OS=Cucurbita maxima OX=3661 GN=LOC111469322 PE=3 SV=1	[more]
A0A6J1E3A4	3.23e-187	83.89	Splicing factor YJU2 OS=Momordica charantia OX=3673 GN=LOC111025649 PE=3 SV=1	[more]

BLAST of Csor.00g190310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17130.1	1.7e-100	60.53	Family of unknown function (DUF572)	[more]
AT1G17130.2	2.0e-98	59.31	Family of unknown function (DUF572)	[more]
AT2G32050.1	9.5e-64	58.06	Family of unknown function (DUF572)	[more]
AT3G43250.1	8.3e-60	54.17	Family of unknown function (DUF572)	[more]
AT2G29430.1	9.0e-22	58.23	Family of unknown function (DUF572)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 173..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..131
None	No IPR available	PANTHER	PTHR12111:SF7	BNAA02G14200D PROTEIN	coord: 1..329
IPR007590	Saf4/Yju2 protein	PFAM	PF04502	DUF572	coord: 9..328 e-value: 4.1E-93 score: 312.6
IPR007590	Saf4/Yju2 protein	PANTHER	PTHR12111	SPLICING FACTOR YJU2	coord: 1..329
IPR043701	Splicing factor Yju2	HAMAP	MF_03226	YJU2	coord: 1..328 score: 24.366844

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g190310.m01	Csor.00g190310.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000349	generation of catalytic spliceosome for first transesterification step
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071006	U2-type catalytic step 1 spliceosome
molecular_function	GO:0046872	metal ion binding