Csor.00g190200 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCATGATTTGCCTTATTAGGGGACCGGGAAGGCTTAGATTAGAAATCCAAGCTTCTGTAGTGAAATCTTGCATCATTTGTCCAAGTGCTCTCGCCATTGGAACGAACCTTTCAGAAAATGCAATTAATGTATTAAGTTTTGGTGAAAATAATGAACCCTTGATCTTTCCATTTATCTGCTAATTCTTCTCCTATTCTTCTACTTCTTGTTTCCCATTTGATGGTTTTCCTTATTAATGCACCGTAATGCCAGATGGGGATTCTCAAGCCCTTGCCGAGGTGTGTTCGTAGTTCTGCGCGTGCTAGTGTTATTCCCTATGGTGTCAGAAGGTCGTGGAAGAGCTTATTCATAATACCTTGAATGCTGATGGGTGGAAGGTATGGAGTCTTCTAATCATCCATCATAATTACTGTTCTACGCTGAGGCATGGGGTTGCTTTACTCTCCCAAGTAGGAAGTAAAGCGTTTTATTACTAGCTATCTATGCTAAGGTAAGTTAATCCGGTTGGTAGTATACGGAATACTTGAATTTTGATGAACTATGTCAATAAGTTTGGGTGATCTGCCTATGGCATGCTTGATGTGATTATCTTATCGACAGGTGGTGAAAAGTAGAATTCTAAGGAAGGAAACAGACATGTTAGCAAGCTGGAAAATACTTAATGAATTTGGATTTACTACCTCAGGTGTTTTTATGAGAGCTCAACCGAACCTACCCCTCTTTTTCTCTGATTCAAGGGAAGTCTAACAAGGTATCCATAGGGGAACCTTATTTCAATAGCTTTATGCAGTGAAATTGAAATTTCATGATCTCATCAAGATGCCCAAGGTGGAACGTTTGGCTCCCGAGGACAGGCATTTGCTTCGATTTCAGATGTATCGGTGGTGGAGATCATAACCAAAGCATGTGGGAGGGCAAATGGATATTCTAAAGTCATGAAGGTACAGAGGTTTACAGCTATTTAGTAATGGAGCAATATATGCCTCATATTTTGTTGTCCTTCAAAGTAATTAACTTTTATTCTGTTCGTCACAGGGTTGCAAATGCTTGTGTCTTGGAATTGATGATGATATGGAAGATGTTGGTACTACTGGTAACAGTTTCATCATCCCTCAGTTACATTATATTGTGAAAATCGCTTACCATGCTTTAAGACCTTGCTAG ATGTCCATGATTTGCCTTATTAGGGGACCGGGAAGGCTTAGATTAGAAATCCAAGCTTCTGTAGTGAAATCTTGCATCATTTGTCCAAGTGCTCTCGCCATTGGAACGAACCTTTCAGAAAATGCAATTAATAAGGTCGTGGAAGAGCTTATTCATAATACCTTGAATGCTGATGGGTGGAAGGTGGTGAAAAGTAGAATTCTAAGGAAGGAAACAGACATGTTAGCAAGCTGGAAAATACTTAATGAATTTGGATTTACTACCTCAGATGCCCAAGGTGGAACGTTTGGCTCCCGAGGACAGGCATTTGCTTCGATTTCAGATGTATCGGTGGTGGAGATCATAACCAAAGCATGTGGGAGGGCAAATGGATATTCTAAAGTCATGAAGGGTTGCAAATGCTTGTGTCTTGGAATTGATGATGATATGGAAGATGTTGGTACTACTGGTAACAGTTTCATCATCCCTCAGTTACATTATATTGTGAAAATCGCTTACCATGCTTTAAGACCTTGCTAG ATGTCCATGATTTGCCTTATTAGGGGACCGGGAAGGCTTAGATTAGAAATCCAAGCTTCTGTAGTGAAATCTTGCATCATTTGTCCAAGTGCTCTCGCCATTGGAACGAACCTTTCAGAAAATGCAATTAATAAGGTCGTGGAAGAGCTTATTCATAATACCTTGAATGCTGATGGGTGGAAGGTGGTGAAAAGTAGAATTCTAAGGAAGGAAACAGACATGTTAGCAAGCTGGAAAATACTTAATGAATTTGGATTTACTACCTCAGATGCCCAAGGTGGAACGTTTGGCTCCCGAGGACAGGCATTTGCTTCGATTTCAGATGTATCGGTGGTGGAGATCATAACCAAAGCATGTGGGAGGGCAAATGGATATTCTAAAGTCATGAAGGGTTGCAAATGCTTGTGTCTTGGAATTGATGATGATATGGAAGATGTTGGTACTACTGGTAACAGTTTCATCATCCCTCAGTTACATTATATTGTGAAAATCGCTTACCATGCTTTAAGACCTTGCTAG MSMICLIRGPGRLRLEIQASVVKSCIICPSALAIGTNLSENAINKVVEELIHNTLNADGWKVVKSRILRKETDMLASWKILNEFGFTTSDAQGGTFGSRGQAFASISDVSVVEIITKACGRANGYSKVMKGCKCLCLGIDDDMEDVGTTGNSFIIPQLHYIVKIAYHALRPC Homology
BLAST of Csor.00g190200 vs. ExPASy Swiss-Prot
Match: F4JN26 (DNA mismatch repair protein MLH3 OS=Arabidopsis thaliana OX=3702 GN=MLH3 PE=2 SV=2) HSP 1 Score: 92.0 bits (227), Expect = 6.8e-18 Identity = 57/121 (47.11%), Postives = 73/121 (60.33%), Query Frame = 0
BLAST of Csor.00g190200 vs. NCBI nr
Match: KAG6577819.1 (DNA mismatch repair protein MLH3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 347 bits (891), Expect = 1.19e-120 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of Csor.00g190200 vs. NCBI nr
Match: KAG7015858.1 (DNA mismatch repair protein MLH3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 268 bits (686), Expect = 1.23e-89 Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Csor.00g190200 vs. NCBI nr
Match: XP_038903645.1 (DNA mismatch repair protein MLH3 isoform X4 [Benincasa hispida]) HSP 1 Score: 114 bits (285), Expect = 8.97e-26 Identity = 69/134 (51.49%), Postives = 86/134 (64.18%), Query Frame = 0
BLAST of Csor.00g190200 vs. NCBI nr
Match: XP_038903644.1 (DNA mismatch repair protein MLH3 isoform X3 [Benincasa hispida]) HSP 1 Score: 114 bits (285), Expect = 8.99e-26 Identity = 69/134 (51.49%), Postives = 86/134 (64.18%), Query Frame = 0
BLAST of Csor.00g190200 vs. NCBI nr
Match: XP_038903643.1 (DNA mismatch repair protein MLH3 isoform X2 [Benincasa hispida]) HSP 1 Score: 114 bits (285), Expect = 8.99e-26 Identity = 69/134 (51.49%), Postives = 86/134 (64.18%), Query Frame = 0
BLAST of Csor.00g190200 vs. ExPASy TrEMBL
Match: A0A6J1DVM2 (DNA mismatch repair protein MLH3 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111024800 PE=3 SV=1) HSP 1 Score: 113 bits (283), Expect = 7.93e-26 Identity = 68/134 (50.75%), Postives = 85/134 (63.43%), Query Frame = 0
BLAST of Csor.00g190200 vs. ExPASy TrEMBL
Match: A0A6J1DWT6 (DNA mismatch repair protein MLH3 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111024800 PE=3 SV=1) HSP 1 Score: 113 bits (283), Expect = 7.95e-26 Identity = 68/134 (50.75%), Postives = 85/134 (63.43%), Query Frame = 0
BLAST of Csor.00g190200 vs. ExPASy TrEMBL
Match: A0A6J1E0G9 (DNA mismatch repair protein MLH3 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111024800 PE=3 SV=1) HSP 1 Score: 113 bits (283), Expect = 7.96e-26 Identity = 68/134 (50.75%), Postives = 85/134 (63.43%), Query Frame = 0
BLAST of Csor.00g190200 vs. ExPASy TrEMBL
Match: A0A6J1DVD7 (DNA mismatch repair protein MLH3 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024800 PE=3 SV=1) HSP 1 Score: 113 bits (283), Expect = 8.02e-26 Identity = 68/134 (50.75%), Postives = 85/134 (63.43%), Query Frame = 0
BLAST of Csor.00g190200 vs. ExPASy TrEMBL
Match: A0A0A0L1I8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000710 PE=3 SV=1) HSP 1 Score: 113 bits (282), Expect = 1.10e-25 Identity = 68/134 (50.75%), Postives = 85/134 (63.43%), Query Frame = 0
BLAST of Csor.00g190200 vs. TAIR 10
Match: AT4G35520.1 (MUTL protein homolog 3 ) HSP 1 Score: 92.0 bits (227), Expect = 4.9e-19 Identity = 57/121 (47.11%), Postives = 73/121 (60.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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