Csor.00g190150 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g190150
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Location	Csor_Chr16: 9394118 .. 9397717 (+)
RNA-Seq Expression	Csor.00g190150
Synteny	Csor.00g190150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCGGAAGCGGAAGGAATCGTAGAGCATCGAAGCTCGATAGCGGCTCCATGCATTTTCTTGGTCGTTATCGCTTTTCAATTTCTCGCTAGATGGCTGGAGCACCTGAAGAAGGTTCGCCTTTTCGCTTGATTTTTTTTTTTCTTTTTTTTTCCGTCGGAATCTTGTTCATGTTTGTATTTTCTATCATTCTGCTTGCTTTTCAACCCTTAACTTGTTATTGATAGTCGAATTTTGAGGCCTACCTCAAATTTTGGGGCTGTAGCGCGTTTCAGTTTTTGCGTTGACAGGCTTAAGAATGCAATATTCCCTACTGTGCTTCGTGAAGTTCACGTTATTGGATTGAAGACATTGTGATTTGATTAGTTTTGCGACGTGATGCATTCAATGTGGAGATCTATTGATGTTTTAAATCTTAATATCTAAGAAATTTGCTGTGTTATAATTGTTATCCGTTCAATCTTGTCAATCTTTTTTGTTTTGAAACTCATGTTTCGATTATGCATGTGCTTTTCAGGGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCAAGCACCTTATCGCAGTAAGTAGTGTTTTCCAGCTGGATTCAACATTAAACAGTGCCTAATTCGGCTCAAATCAATAATTCAGTAGACTTGCTTGTAACTGTTATGATTATCCTGGGGATCATATTTATTTGCTTTTATGTTCGTGTAGACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAACTGTGAGGCTAATTAATTCATCCCCTAATATCTAATATCTTCCCTCAATTATTTTTCTGTTTTTCTTTTTAACTAATGAGTTGCTGAAAAAGTATTGTGAAATGAGATACCACTTCTTATCAATGGGAATAATTTTGCTATTGTATGGTAAGGTTTGTTATATGAATCATCGATACATGAGCAGTTTTGAGGATGTTGCTTGGAGTATTGACTGCTATGTGATATAGGAATCTCAGGATTAGAAGCTTGAGCAACCATTAAGCTATTGACCATTAGAAAAGAATGGTTCTCAATTTTTTTTTTTAAAAAAAAAAATTGCTTATAGACTCCAAACTAAGAGTAATACGGGTGTCTGCGCTGGTAAATGTTATAACCCACTCCATCCAAAGGAACTGGGTACTTATAAATTCATCCAACATGGTGCTCTTGCTGCCAATCTTGATTTCATATATGGATTATGGTTCGACTGTTCAATGAATTGGGATTGTAGAGACCCTCGAACAACCTCTAATTGGTTATTTGCTTCTGCATAGGAGGGAGCCAAAAGAAATGTTATGTATATCATAGCAAGTTGAAAGCAACATCTCATTGGTAAAGTTGGTCTTATTCTGGTAAATGTATGCATTAGCACATGTACATTGAAGAATCTGATTTGGTCTATTGTAAAGTATTGAATGTTCCATGGATAAAGTATCGGTATCCAACAAATACAGATTGTTGGCGTAGATTAACTCATGTTGTGGCGCCATTTTTTATACTAGACCATGTGTTATAACATCCTTTTATCCCTCAAATCTAATATCACCCTAAATTTTACTTGAAATGTTGTGTATGTCATATGTAACGCCGCATGTTCAAGATTTGAATTAGGATTCGGAATCCGAACTTGGCACTTGATGGCTCTGGCACTCCCCTGCATCCCTGCGACATGGTCACATTACCTACGTTTAAGCCTTTTTAGCTATCCTATCTTTAGGATCCCTCTCATTCGGATGTGGTCTCGATTAATTCATGTTCCTCCTCCTTTACTCAAGTGTCACATCATAGTTTGTAGTTGTTATCCAGCATATTTTCATGTTTGTGTATCTATTTCTTTGGGCGCACTAAACCACATTTTTCATTTGGCCCATGTTAAATACCACTCCGGCTGCTTGGGAAGCACTTATATATAGGGCTTTACCAAGTTTTTTATTTTCTATAATTCGTTTCAAGTTATCCAACTAGCAGAAGCAATGATTTGTGGACTTGTATTCTTATTTTGTCTAAAATCCACTGTCACTCAAAATGCATTTTGAAGGCAAACTATAATATAAGGGCAGCAAATAGCCGTATTTATCATCATAAACTAGGCTCAACTTCTGTTAATCTTATTTCCGCTGTTTTCCCCCATTAATTGCTTTTGTTCCCTTCAGTACTACTTAATAAGATACTTCAGATTACATTATAGATTCATTTTGAATGACATTGCTGCCAGATCAAGAATCACGTAATAAGGAGATAAAGACATCCTATGGTTTATACAGTCGAGTACTGTTGATATCAAAGGTGATTTATTGTACTGAATGTTCTAAGAAATGTGTTTATTTGTTGGGGGTTCTTTTACAAAGTTACTTATCTTGTGGTCGTGTAGGTTTTTATGTATATTGCGCTGATCTTCTGGTTTTGGAGAGTTTCTGTTGCAACTGTACCTCATCACCTTGTGCAGCCATTCGGTAATCACTCTCATTGCCAGCAAATTTCTGAAGAACAACTAAAAAGAAATTTCATTTCATTTAAGTATTAACTATTATAGTGTCTTGATGCTCCCCCTTCTGCAGGAAGAGTTTTATCTTGGAAGGCTGGAGGTATCGTAAATGATTATGTGAAGGTAGAACAATAATCACTACTCAATTGTCCGTAAATAACCTCTTATATCATAGTCAATTTATTTTATCCCTCAAGCATAATACCACTACCCCTATTCGAAAAATGATACTTACATGTTCAGCATCCCTATACATGATACGATAGAATTAGGAATATGATTTAGGGTATTGAGGCTCTGATAGTGGCTAATGTTTGGCATGGGATGGTAACTGTTGGGCTTTGATTGAGGAGGTACTGCTAGGTTTGCTTTATTGGGGAAGAAGGAAAAATTTTGTAGCATGCTAGTTTCATTACTATCTTGTGGGATTTTTCTTGAGAGAGACAATAGGATTTTTAGGGGGTGGAGAGGTCATGAAATGAGGTGGGGGGGGGGGGGGGGGGGGGGTGAGGTTTAACGCTTCATTGTGGCATCGGTTACAAGATCTTTTTGTACTTATGATCTTGGTTTGATTTTGTTACAAGTGAGTCCCTTTTTATAGTTTTTCCTGGATTCTTTTTCATGTTTTTTGTATGTCCTTGTAAATTCTTTCATTTTTTTTTTTTTTCACTAAAAGCTCGGTTTCTTACCCCAAAAAATATTATAGAGTAATTCGAGGGGAGTTAGAGTGATTCGTAATAAAAAAGTGAGGGGGAAAAGTTAAAGGTAGGCAATAGTTTTGTTGGATTAGGGCTTGAGTTAGTATACTATGAGAGGGAAGTTCCCAAGTACCTCGAATACGAGGGGGTGTTATATTTGATTTCTTCTGTAGAATCGATATGTTCGGGTTCTAGTTCTATTAGCATACTGCTGATGATAACATGAAACTACTGTCCATAGCTACAATCTTTACCCGATTAGTTATGTTGTAATGATGAATTGCAGGTTGGAATTATACCTTGGTTGATACTGTCGACACGGGTTAGCAAATTTGTATGTCAGGTTGTCCGCTGA

mRNA sequence

ATGGAAGCGGAAGCGGAAGGAATCGTAGAGCATCGAAGCTCGATAGCGGCTCCATGCATTTTCTTGGTCGTTATCGCTTTTCAATTTCTCGCTAGATGGCTGGAGCACCTGAAGAAGGGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCAAGCACCTTATCGCAACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAACTATCAAGAATCACGTAATAAGGAGATAAAGACATCCTATGGTTTATACAGTCGAGTACTGTTGATATCAAAGGTTTTTATGTATATTGCGCTGATCTTCTGGTTTTGGAGAGTTTCTGTTGCAACTGTACCTCATCACCTTGTGCAGCCATTCGGAAGAGTTTTATCTTGGAAGGCTGGAGGTATCGTAAATGATTATGTGAAGGTTGGAATTATACCTTGGTTGATACTGTCGACACGGGTTAGCAAATTTGTATGTCAGGTTGTCCGCTGA

Coding sequence (CDS)

ATGGAAGCGGAAGCGGAAGGAATCGTAGAGCATCGAAGCTCGATAGCGGCTCCATGCATTTTCTTGGTCGTTATCGCTTTTCAATTTCTCGCTAGATGGCTGGAGCACCTGAAGAAGGGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCAAGCACCTTATCGCAACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAACTATCAAGAATCACGTAATAAGGAGATAAAGACATCCTATGGTTTATACAGTCGAGTACTGTTGATATCAAAGGTTTTTATGTATATTGCGCTGATCTTCTGGTTTTGGAGAGTTTCTGTTGCAACTGTACCTCATCACCTTGTGCAGCCATTCGGAAGAGTTTTATCTTGGAAGGCTGGAGGTATCGTAAATGATTATGTGAAGGTTGGAATTATACCTTGGTTGATACTGTCGACACGGGTTAGCAAATTTGTATGTCAGGTTGTCCGCTGA

Protein sequence

MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR

Homology

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BLAST of Csor.00g190150 vs. ExPASy Swiss-Prot
Match: Q1H5D2 (Protein GET1 OS=Arabidopsis thaliana OX=3702 GN=GET1 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.4e-50
Identity = 104/175 (59.43%), Postives = 127/175 (72.57%), Query Frame = 0


Query: 4   EAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREAST 63
           E E ++E R  +AAP  F+VV+ FQ L++WL+ LKK GS +  E ELR  IKQLLREAS 
Sbjct: 2   EGEKLIEDRGFLAAPLTFVVVVVFQLLSKWLDQLKKKGSKNTRESELRTEIKQLLREASA 61

Query: 64  LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIALIFW 123
           LSQP+TFAQAAKLRR AA KEKELA Y E  +KEIK SY +Y + LL SKV +Y+ L+  
Sbjct: 62  LSQPATFAQAAKLRRSAATKEKELAQYLEQHHKEIKLSYDMYGKGLLASKVVIYLILVLC 121

Query: 124 FWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVV 179
           FWR  +A +   LVQPFG +LSW  GG +  +V VGIIPWLILS RVSK+VC+ V
Sbjct: 122 FWRTPIAIIAKQLVQPFGTLLSWGTGGHMTGHVMVGIIPWLILSNRVSKYVCRFV 176

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BLAST of Csor.00g190150 vs. NCBI nr
Match: XP_022923433.1 (uncharacterized protein LOC111431128 [Cucurbita moschata] >KAG6577814.1 Guided entry of tail-anchored proteins factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015853.1 Tail-anchored protein insertion receptor WRB [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 345 bits (884), Expect = 2.37e-119
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLRE 60
           MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLRE
Sbjct: 1   MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLRE 60

Query: 61  ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIAL 120
           ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIAL
Sbjct: 61  ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIAL 120

Query: 121 IFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR 179
           IFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR
Sbjct: 121 IFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR 179

[Close]

BLAST of Csor.00g190150 vs. NCBI nr
Match: XP_023552250.1 (uncharacterized protein LOC111809975 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 341 bits (874), Expect = 7.92e-118
Identity = 175/179 (97.77%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLRE 60
           MEAEAEGIVEHRSS+AAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLRE
Sbjct: 1   MEAEAEGIVEHRSSLAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLRE 60

Query: 61  ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIAL 120
           ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIAL
Sbjct: 61  ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIAL 120

Query: 121 IFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR 179
           +FWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSK+VC+VVR
Sbjct: 121 VFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKYVCRVVR 179

[Close]

BLAST of Csor.00g190150 vs. NCBI nr
Match: XP_023007643.1 (uncharacterized protein LOC111500212 [Cucurbita maxima])

HSP 1 Score: 340 bits (873), Expect = 1.21e-117
Identity = 175/178 (98.31%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 2   EAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREA 61
           EAEAEGIVEHRSSIAAPCIFL+VIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREA
Sbjct: 4   EAEAEGIVEHRSSIAAPCIFLIVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREA 63

Query: 62  STLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIALI 121
           STLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYI L+
Sbjct: 64  STLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYITLV 123

Query: 122 FWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR 179
           FWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR
Sbjct: 124 FWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR 181

[Close]

BLAST of Csor.00g190150 vs. NCBI nr
Match: XP_008448478.1 (PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo])

HSP 1 Score: 313 bits (802), Expect = 7.51e-107
Identity = 161/179 (89.94%), Postives = 168/179 (93.85%), Query Frame = 0


Query: 1   MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLRE 60
           ME EAEGIVEH SSIAAP IF +VI FQFLARWLEHLKKGGSNSQVE+ELRKSIKQLLRE
Sbjct: 1   MEMEAEGIVEHGSSIAAPFIFFIVIGFQFLARWLEHLKKGGSNSQVELELRKSIKQLLRE 60

Query: 61  ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIAL 120
           ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYS+VLLISKV +YI L
Sbjct: 61  ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLISKVIIYIVL 120

Query: 121 IFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR 179
           + WFWR SVATVPHHLVQPFG+ LSWKAGG VNDYVKVGIIPWLILSTRVSKFVCQVV+
Sbjct: 121 VCWFWRASVATVPHHLVQPFGKFLSWKAGGTVNDYVKVGIIPWLILSTRVSKFVCQVVK 179

[Close]

BLAST of Csor.00g190150 vs. NCBI nr
Match: XP_022145254.1 (uncharacterized protein LOC111014752 [Momordica charantia])

HSP 1 Score: 299 bits (765), Expect = 3.27e-101
Identity = 152/178 (85.39%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLRE 60
           MEAEAEGIVEHRSS AAP IFLVVI FQFLARWLE  K+ GSN+ VEMELRKSIKQLL+E
Sbjct: 1   MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKE 60

Query: 61  ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIAL 120
           AS LSQPSTFAQAAKLRRLAAAKEKELANYQESR+KE+KTSYGLYS+VLL SKV +YIAL
Sbjct: 61  ASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKTSYGLYSQVLLTSKVVIYIAL 120

Query: 121 IFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVV 178
           + WFWR SVATVPHHLVQPFG++LSW+AGG VNDYVKVG+IPWLILSTRVSK+VCQVV
Sbjct: 121 VLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKVGVIPWLILSTRVSKYVCQVV 178

[Close]

BLAST of Csor.00g190150 vs. ExPASy TrEMBL
Match: A0A6J1E9M6 (uncharacterized protein LOC111431128 OS=Cucurbita moschata OX=3662 GN=LOC111431128 PE=3 SV=1)

HSP 1 Score: 345 bits (884), Expect = 1.15e-119
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLRE 60
           MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLRE
Sbjct: 1   MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLRE 60

Query: 61  ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIAL 120
           ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIAL
Sbjct: 61  ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIAL 120

Query: 121 IFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR 179
           IFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR
Sbjct: 121 IFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR 179

[Close]

BLAST of Csor.00g190150 vs. ExPASy TrEMBL
Match: A0A6J1L884 (uncharacterized protein LOC111500212 OS=Cucurbita maxima OX=3661 GN=LOC111500212 PE=3 SV=1)

HSP 1 Score: 340 bits (873), Expect = 5.85e-118
Identity = 175/178 (98.31%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 2   EAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREA 61
           EAEAEGIVEHRSSIAAPCIFL+VIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREA
Sbjct: 4   EAEAEGIVEHRSSIAAPCIFLIVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREA 63

Query: 62  STLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIALI 121
           STLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYI L+
Sbjct: 64  STLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYITLV 123

Query: 122 FWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR 179
           FWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR
Sbjct: 124 FWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR 181

[Close]

BLAST of Csor.00g190150 vs. ExPASy TrEMBL
Match: A0A1S3BKE1 (uncharacterized protein LOC103490650 OS=Cucumis melo OX=3656 GN=LOC103490650 PE=3 SV=1)

HSP 1 Score: 313 bits (802), Expect = 3.64e-107
Identity = 161/179 (89.94%), Postives = 168/179 (93.85%), Query Frame = 0


Query: 1   MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLRE 60
           ME EAEGIVEH SSIAAP IF +VI FQFLARWLEHLKKGGSNSQVE+ELRKSIKQLLRE
Sbjct: 1   MEMEAEGIVEHGSSIAAPFIFFIVIGFQFLARWLEHLKKGGSNSQVELELRKSIKQLLRE 60

Query: 61  ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIAL 120
           ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYS+VLLISKV +YI L
Sbjct: 61  ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLISKVIIYIVL 120

Query: 121 IFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR 179
           + WFWR SVATVPHHLVQPFG+ LSWKAGG VNDYVKVGIIPWLILSTRVSKFVCQVV+
Sbjct: 121 VCWFWRASVATVPHHLVQPFGKFLSWKAGGTVNDYVKVGIIPWLILSTRVSKFVCQVVK 179

[Close]

BLAST of Csor.00g190150 vs. ExPASy TrEMBL
Match: A0A6J1CUP1 (uncharacterized protein LOC111014752 OS=Momordica charantia OX=3673 GN=LOC111014752 PE=3 SV=1)

HSP 1 Score: 299 bits (765), Expect = 1.58e-101
Identity = 152/178 (85.39%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLRE 60
           MEAEAEGIVEHRSS AAP IFLVVI FQFLARWLE  K+ GSN+ VEMELRKSIKQLL+E
Sbjct: 1   MEAEAEGIVEHRSSFAAPSIFLVVITFQFLARWLERTKRSGSNNDVEMELRKSIKQLLKE 60

Query: 61  ASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIAL 120
           AS LSQPSTFAQAAKLRRLAAAKEKELANYQESR+KE+KTSYGLYS+VLL SKV +YIAL
Sbjct: 61  ASALSQPSTFAQAAKLRRLAAAKEKELANYQESRSKEMKTSYGLYSQVLLTSKVVIYIAL 120

Query: 121 IFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVV 178
           + WFWR SVATVPHHLVQPFG++LSW+AGG VNDYVKVG+IPWLILSTRVSK+VCQVV
Sbjct: 121 VLWFWRASVATVPHHLVQPFGKLLSWRAGGTVNDYVKVGVIPWLILSTRVSKYVCQVV 178

[Close]

BLAST of Csor.00g190150 vs. ExPASy TrEMBL
Match: A0A6J1I7A9 (uncharacterized protein LOC111470261 OS=Cucurbita maxima OX=3661 GN=LOC111470261 PE=3 SV=1)

HSP 1 Score: 297 bits (761), Expect = 6.01e-101
Identity = 152/174 (87.36%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 4   EAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREAST 63
           EAE IVEHR+SI AP IFL+VIAFQFLA WL+HLKK GSN+QVEMELRKSIKQLLREAST
Sbjct: 2   EAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAST 61

Query: 64  LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIALIFW 123
           LSQPSTFAQAAKLRRLAAAKEKELANYQESR+K++K+SYGLYSRVLLISKV +YI L+ W
Sbjct: 62  LSQPSTFAQAAKLRRLAAAKEKELANYQESRSKKVKSSYGLYSRVLLISKVLIYIVLVCW 121

Query: 124 FWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQV 177
           FWR SVATVPHHLVQPFGR LSW+AGGIVNDYVKVGIIPWLILSTRVSKFVC+V
Sbjct: 122 FWRASVATVPHHLVQPFGRFLSWRAGGIVNDYVKVGIIPWLILSTRVSKFVCRV 175

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BLAST of Csor.00g190150 vs. TAIR 10
Match: AT4G16444.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 199.9 bits (507), Expect = 1.7e-51
Identity = 104/175 (59.43%), Postives = 127/175 (72.57%), Query Frame = 0


Query: 4   EAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREAST 63
           E E ++E R  +AAP  F+VV+ FQ L++WL+ LKK GS +  E ELR  IKQLLREAS 
Sbjct: 2   EGEKLIEDRGFLAAPLTFVVVVVFQLLSKWLDQLKKKGSKNTRESELRTEIKQLLREASA 61

Query: 64  LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYIALIFW 123
           LSQP+TFAQAAKLRR AA KEKELA Y E  +KEIK SY +Y + LL SKV +Y+ L+  
Sbjct: 62  LSQPATFAQAAKLRRSAATKEKELAQYLEQHHKEIKLSYDMYGKGLLASKVVIYLILVLC 121

Query: 124 FWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVV 179
           FWR  +A +   LVQPFG +LSW  GG +  +V VGIIPWLILS RVSK+VC+ V
Sbjct: 122 FWRTPIAIIAKQLVQPFGTLLSWGTGGHMTGHVMVGIIPWLILSNRVSKYVCRFV 176

The following BLAST results are available for this feature:

BLAST of Csor.00g190150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1H5D2	2.4e-50	59.43	Protein GET1 OS=Arabidopsis thaliana OX=3702 GN=GET1 PE=1 SV=1	[more]

BLAST of Csor.00g190150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923433.1	2.37e-119	100.00	uncharacterized protein LOC111431128 [Cucurbita moschata] >KAG6577814.1 Guided e...	[more]
XP_023552250.1	7.92e-118	97.77	uncharacterized protein LOC111809975 [Cucurbita pepo subsp. pepo]	[more]
XP_023007643.1	1.21e-117	98.31	uncharacterized protein LOC111500212 [Cucurbita maxima]	[more]
XP_008448478.1	7.51e-107	89.94	PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo]	[more]
XP_022145254.1	3.27e-101	85.39	uncharacterized protein LOC111014752 [Momordica charantia]	[more]

BLAST of Csor.00g190150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E9M6	1.15e-119	100.00	uncharacterized protein LOC111431128 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1L884	5.85e-118	98.31	uncharacterized protein LOC111500212 OS=Cucurbita maxima OX=3661 GN=LOC111500212...	[more]
A0A1S3BKE1	3.64e-107	89.94	uncharacterized protein LOC103490650 OS=Cucumis melo OX=3656 GN=LOC103490650 PE=...	[more]
A0A6J1CUP1	1.58e-101	85.39	uncharacterized protein LOC111014752 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1I7A9	6.01e-101	87.36	uncharacterized protein LOC111470261 OS=Cucurbita maxima OX=3661 GN=LOC111470261...	[more]

BLAST of Csor.00g190150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16444.1	1.7e-51	59.43	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 73..96
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 13..173
None	No IPR available	PANTHER	PTHR11760:SF44	BNAC07G33680D PROTEIN	coord: 13..173
IPR028945	Get1 family	PFAM	PF04420	CHD5	coord: 40..164 e-value: 1.3E-9 score: 38.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g190150.m01	Csor.00g190150.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048767	root hair elongation
biological_process	GO:0071816	tail-anchored membrane protein insertion into ER membrane
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0043529	GET complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0043621	protein self-association