Csor.00g189920 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g189920
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionRING-type domain-containing protein
LocationCsor_Chr16: 9255840 .. 9256268 (+)
RNA-Seq ExpressionCsor.00g189920
SyntenyCsor.00g189920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTCAACAAGCTCTTCTTCTTCTTCTACAACAACCTCATCGGCTTCCGAACCAGCCCGACACTCAAGCAAGCAACCCCGCTTCCTCGTAGTGCCGATTCGAGCCTTCGACCTATGACACCTGATGATTGTGTCGCAGCTCTTTCGAGCCCTGAGAAGGCGTTGGAAGGCGAGACATGTTGCGTATGCTTGTCGTGTATGGGAAACAAGGACAAAGACGAGGGAATTGGCACGAGTGTTCTTCCTTGCTCCCACGAGTTTCATAAGATATGTCTCGATCGATGGTTTGAAGAGTGTCGGAGAACTTGTCCGATATGCCGATATTCAATGGAAGGAGGAGGGAATAATCATGAAGATGGGAGTAATGAAATGCTAACGGATGAGATGGTGATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGA

mRNA sequence

ATGGTTTTCAACAAGCTCTTCTTCTTCTTCTACAACAACCTCATCGGCTTCCGAACCAGCCCGACACTCAAGCAAGCAACCCCGCTTCCTCGTAGTGCCGATTCGAGCCTTCGACCTATGACACCTGATGATTGTGTCGCAGCTCTTTCGAGCCCTGAGAAGGCGTTGGAAGGCGAGACATGTTGCGTATGCTTGTCGTGTATGGGAAACAAGGACAAAGACGAGGGAATTGGCACGAGTGTTCTTCCTTGCTCCCACGAGTTTCATAAGATATGTCTCGATCGATGGTTTGAAGAGTGTCGGAGAACTTGTCCGATATGCCGATATTCAATGGAAGGAGGAGGGAATAATCATGAAGATGGGAGTAATGAAATGCTAACGGATGAGATGGTGATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGA

Coding sequence (CDS)

ATGGTTTTCAACAAGCTCTTCTTCTTCTTCTACAACAACCTCATCGGCTTCCGAACCAGCCCGACACTCAAGCAAGCAACCCCGCTTCCTCGTAGTGCCGATTCGAGCCTTCGACCTATGACACCTGATGATTGTGTCGCAGCTCTTTCGAGCCCTGAGAAGGCGTTGGAAGGCGAGACATGTTGCGTATGCTTGTCGTGTATGGGAAACAAGGACAAAGACGAGGGAATTGGCACGAGTGTTCTTCCTTGCTCCCACGAGTTTCATAAGATATGTCTCGATCGATGGTTTGAAGAGTGTCGGAGAACTTGTCCGATATGCCGATATTCAATGGAAGGAGGAGGGAATAATCATGAAGATGGGAGTAATGAAATGCTAACGGATGAGATGGTGATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGA

Protein sequence

MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPMTPDDCVAALSSPEKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGNNHEDGSNEMLTDEMVIWFSSFHTSGF
Homology
BLAST of Csor.00g189920 vs. ExPASy Swiss-Prot
Match: Q91XF4 (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-07
Identity = 23/67 (34.33%), Postives = 37/67 (55.22%), Query Frame = 0

Query: 53  EKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSME 112
           +K  E + C +CL      + ++G    VLPC+H +H  C+D W  + R+TCPIC+  + 
Sbjct: 222 QKGDEYDVCAICLD-----EYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVH 281

Query: 113 GGGNNHE 120
            G  + E
Sbjct: 282 RGPGDEE 283

BLAST of Csor.00g189920 vs. ExPASy Swiss-Prot
Match: Q5XIL0 (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-07
Identity = 22/67 (32.84%), Postives = 37/67 (55.22%), Query Frame = 0

Query: 53  EKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSME 112
           +K  E + C +CL      + ++G    +LPC+H +H  C+D W  + R+TCPIC+  + 
Sbjct: 222 QKGDEYDVCAICLD-----EYEDGDKLRILPCAHAYHSRCVDPWLTQTRKTCPICKQPVH 281

Query: 113 GGGNNHE 120
            G  + E
Sbjct: 282 RGPGDEE 283

BLAST of Csor.00g189920 vs. ExPASy Swiss-Prot
Match: Q4R6Y5 (E3 ubiquitin-protein ligase ZNRF4 OS=Macaca fascicularis OX=9541 GN=ZNRF4 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.0e-07
Identity = 25/72 (34.72%), Postives = 42/72 (58.33%), Query Frame = 0

Query: 59  ETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEEC-RRTCPICRYSMEGGGNN 118
           + C +CL      + +EG    +LPCSH +H  C+D WF +  RR+CP+C+ S+ G  ++
Sbjct: 307 DLCAICLD-----EYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAGTEDS 366

Query: 119 HEDGSNEMLTDE 130
             D + +  +DE
Sbjct: 367 F-DSTTDSFSDE 372

BLAST of Csor.00g189920 vs. ExPASy Swiss-Prot
Match: Q9NVW2 (E3 ubiquitin-protein ligase RLIM OS=Homo sapiens OX=9606 GN=RLIM PE=1 SV=3)

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-07
Identity = 26/58 (44.83%), Postives = 34/58 (58.62%), Query Frame = 0

Query: 59  ETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGN 117
           +TC VC++     +  EG     LPCSHE+H  C+DRW  E   TCPICR ++   GN
Sbjct: 568 KTCSVCIT-----EYTEGNKLRKLPCSHEYHVHCIDRWLSE-NSTCPICRRAVLASGN 619

BLAST of Csor.00g189920 vs. ExPASy Swiss-Prot
Match: Q9WTV7 (E3 ubiquitin-protein ligase RLIM OS=Mus musculus OX=10090 GN=Rlim PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-07
Identity = 26/58 (44.83%), Postives = 34/58 (58.62%), Query Frame = 0

Query: 59  ETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGN 117
           +TC VC++     +  EG     LPCSHE+H  C+DRW  E   TCPICR ++   GN
Sbjct: 544 KTCSVCIT-----EYTEGNKLRKLPCSHEYHVHCIDRWLSE-NSTCPICRRAVLSSGN 595

BLAST of Csor.00g189920 vs. NCBI nr
Match: KAG6577791.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305 bits (782), Expect = 5.16e-105
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPMTPDDCVAALSSPEKALEGET 60
           MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPMTPDDCVAALSSPEKALEGET
Sbjct: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPMTPDDCVAALSSPEKALEGET 60

Query: 61  CCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGNNHED 120
           CCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGNNHED
Sbjct: 61  CCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGNNHED 120

Query: 121 GSNEMLTDEMVIWFSSFHTSGF 142
           GSNEMLTDEMVIWFSSFHTSGF
Sbjct: 121 GSNEMLTDEMVIWFSSFHTSGF 142

BLAST of Csor.00g189920 vs. NCBI nr
Match: KAG7015830.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 303 bits (776), Expect = 4.24e-104
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0

Query: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPMTPDDCVAALSSPEKALEGET 60
           MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRP TPDDCVAALSSPEKALEGET
Sbjct: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPTTPDDCVAALSSPEKALEGET 60

Query: 61  CCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGNNHED 120
           CCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGNNHED
Sbjct: 61  CCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGNNHED 120

Query: 121 GSNEMLTDEMVIWFSSFHTSGF 142
           GSNEMLTDEMVIWFSSFHTSGF
Sbjct: 121 GSNEMLTDEMVIWFSSFHTSGF 142

BLAST of Csor.00g189920 vs. NCBI nr
Match: XP_038906276.1 (E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida])

HSP 1 Score: 238 bits (606), Expect = 4.09e-78
Identity = 113/147 (76.87%), Postives = 128/147 (87.07%), Query Frame = 0

Query: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPMTPDDC-VAALSSPEKALEGE 60
           MVFNK+FFFFYNN +GFR+    KQATPLP   + SLRP+TPDDC +  LSSPEKALEGE
Sbjct: 1   MVFNKVFFFFYNNFMGFRSRLRCKQATPLPHGGNLSLRPITPDDCAIVTLSSPEKALEGE 60

Query: 61  TCCVCLSCMGNKD--KDEGIGTS--VLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGG 120
           TCCVCLS MGNKD  +D+G+GTS  VLPC HEFHK+C+DRWFEECRRTCPICRYSMEGGG
Sbjct: 61  TCCVCLSSMGNKDGDRDKGVGTSTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGG 120

Query: 121 NNHEDGSNEMLTDEMVIWFSSFHTSGF 142
           + HEDG+N++LTDEMVIWFSSFHTSGF
Sbjct: 121 S-HEDGTNQILTDEMVIWFSSFHTSGF 146

BLAST of Csor.00g189920 vs. NCBI nr
Match: KAE8649999.1 (hypothetical protein Csa_010276, partial [Cucumis sativus])

HSP 1 Score: 231 bits (589), Expect = 1.26e-75
Identity = 109/140 (77.86%), Postives = 124/140 (88.57%), Query Frame = 0

Query: 6   LFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPMTPDDC-VAALSSPEKALEGETCCVC 65
           +FFFFYNNLIGFR+ P  KQATPLPRS +SSLRP+  DDC + ALSS EKALEGETCCVC
Sbjct: 1   VFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVC 60

Query: 66  LSCMGNKDKD--EGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGNNHEDGS 125
           LS MGN D+D  +G+GTSVLPC HEFHK+C++RWFEECRRTCPICRYSMEGGG+ HED +
Sbjct: 61  LSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGS-HEDET 120

Query: 126 NEMLTDEMVIWFSSFHTSGF 142
           N++LTDEMVIWFSSFHTSGF
Sbjct: 121 NQILTDEMVIWFSSFHTSGF 139

BLAST of Csor.00g189920 vs. NCBI nr
Match: KAA0052944.1 (E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa] >TYK11400.1 E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa])

HSP 1 Score: 229 bits (583), Expect = 1.45e-74
Identity = 113/149 (75.84%), Postives = 124/149 (83.22%), Query Frame = 0

Query: 1   MVFNKLFFFFYNNLIGFRTSPT-LKQATPLPRSADSSLRPMTPDDC-VAALSSPEKALEG 60
           MVFNK+FFFFYNN IGFR+ PT  KQATPLP   +SSLRPM  DDC + ALSS EKALEG
Sbjct: 1   MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEG 60

Query: 61  ETCCVCLSCMGNKDKDE----GIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGG 120
           ETCCVCLS MGN D D     G GTSVLPC HEFHK+C++RWFEECRRTCPICRYSMEGG
Sbjct: 61  ETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGG 120

Query: 121 GN-NHEDGSNEMLTDEMVIWFSSFHTSGF 142
           G  +HED +N++LTDEMVIWFSSFHTSGF
Sbjct: 121 GGGSHEDETNQILTDEMVIWFSSFHTSGF 149

BLAST of Csor.00g189920 vs. ExPASy TrEMBL
Match: A0A0A0L4W7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 1.59e-79
Identity = 113/145 (77.93%), Postives = 129/145 (88.97%), Query Frame = 0

Query: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPMTPDDC-VAALSSPEKALEGE 60
           M+FNK+FFFFYNNLIGFR+ P  KQATPLPRS +SSLRP+  DDC + ALSS EKALEGE
Sbjct: 1   MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGE 60

Query: 61  TCCVCLSCMGNKDKD--EGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGNN 120
           TCCVCLS MGN D+D  +G+GTSVLPC HEFHK+C++RWFEECRRTCPICRYSMEGGG+ 
Sbjct: 61  TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGS- 120

Query: 121 HEDGSNEMLTDEMVIWFSSFHTSGF 142
           HED +N++LTDEMVIWFSSFHTSGF
Sbjct: 121 HEDETNQILTDEMVIWFSSFHTSGF 144

BLAST of Csor.00g189920 vs. ExPASy TrEMBL
Match: A0A5D3CJ45 (E3 ubiquitin-protein ligase RNF13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00530 PE=4 SV=1)

HSP 1 Score: 229 bits (583), Expect = 7.01e-75
Identity = 113/149 (75.84%), Postives = 124/149 (83.22%), Query Frame = 0

Query: 1   MVFNKLFFFFYNNLIGFRTSPT-LKQATPLPRSADSSLRPMTPDDC-VAALSSPEKALEG 60
           MVFNK+FFFFYNN IGFR+ PT  KQATPLP   +SSLRPM  DDC + ALSS EKALEG
Sbjct: 1   MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEG 60

Query: 61  ETCCVCLSCMGNKDKDE----GIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGG 120
           ETCCVCLS MGN D D     G GTSVLPC HEFHK+C++RWFEECRRTCPICRYSMEGG
Sbjct: 61  ETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGG 120

Query: 121 GN-NHEDGSNEMLTDEMVIWFSSFHTSGF 142
           G  +HED +N++LTDEMVIWFSSFHTSGF
Sbjct: 121 GGGSHEDETNQILTDEMVIWFSSFHTSGF 149

BLAST of Csor.00g189920 vs. ExPASy TrEMBL
Match: A0A6J1CW69 (E3 ubiquitin-protein ligase SDIR1-like OS=Momordica charantia OX=3673 GN=LOC111014786 PE=4 SV=1)

HSP 1 Score: 183 bits (465), Expect = 4.91e-57
Identity = 99/148 (66.89%), Postives = 111/148 (75.00%), Query Frame = 0

Query: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPMTPD-----DCVAALSSPEKA 60
           MVFN++FFFFYN  IGFR  P LKQ T LP   DS+LR M  D     DCV  LSS  KA
Sbjct: 1   MVFNRVFFFFYN-FIGFRGRPKLKQKTLLPHGGDSTLRQMVEDESRIPDCVT-LSSSGKA 60

Query: 61  LEGETCC-VCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGG 120
           LEGE CC VCLS +     +EGI TSVLPC HEFHK+C+DRWFEE RRTCPICRYSMEG 
Sbjct: 61  LEGEMCCCVCLSSI-----EEGIETSVLPCLHEFHKVCVDRWFEERRRTCPICRYSMEGA 120

Query: 121 GNNHEDGSNEMLTDEMVIWFSSFHTSGF 142
           G  +E+G+ ++LTDEMVIWFSSFHTSGF
Sbjct: 121 GQGNENGT-QILTDEMVIWFSSFHTSGF 140

BLAST of Csor.00g189920 vs. ExPASy TrEMBL
Match: A0A5D2RL25 (RING-type domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A02G207900v1 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 9.29e-31
Identity = 64/147 (43.54%), Postives = 89/147 (60.54%), Query Frame = 0

Query: 1   MVFNKLFFFFYNNLIGFRTSPT-----LKQATPLPRSADSSLRPMTPDDCVAALSSPEKA 60
           M+ NKL  F Y  ++G R S +      K+ATP P +A   +  M      ++ S  +++
Sbjct: 1   MILNKLVAFIYT-IVGVRRSVSDEGKRTKEATPPPPTAAGYVVVMEGTAMGSSSSYLQRS 60

Query: 61  LEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGG 120
            EGETCCVCLS M     +EG  T VLPC HEFH++C+D+W + C++ CPICR+SM G  
Sbjct: 61  TEGETCCVCLSSM-----EEGEETRVLPCFHEFHRVCVDKWVKTCQKNCPICRFSM-GEE 120

Query: 121 NNHEDGSNEMLTDEMVIWFSSFHTSGF 142
           +       E  T+EM+IWFSSFH +GF
Sbjct: 121 DRFMFHRREAFTEEMMIWFSSFHIAGF 140

BLAST of Csor.00g189920 vs. ExPASy TrEMBL
Match: A0A2I4FD42 (E3 ubiquitin-protein ligase RNF165-like OS=Juglans regia OX=51240 GN=LOC108997662 PE=4 SV=1)

HSP 1 Score: 115 bits (288), Expect = 3.54e-30
Identity = 68/153 (44.44%), Postives = 88/153 (57.52%), Query Frame = 0

Query: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLR-----------PMTPDDCVAAL 60
           M F KL  F Y+  +G R  P+LK     P ++   L+           PM+P     + 
Sbjct: 1   MDFRKLVSFLYD-FLGPRVQPSLKG---FPSTSYRGLKWEDLQKVKEDPPMSPH---GSG 60

Query: 61  SSPEKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRY 120
           S   + LE E CCVCLS +      +G  T  LPC HEFHK+C+DRWF+ CR+TCP+CR+
Sbjct: 61  SRSVELLEVEQCCVCLSRL-----KKGQDTRTLPCLHEFHKVCVDRWFDACRKTCPVCRF 120

Query: 121 SMEGGGNNHEDGSNEMLTDEMVIWFSSFHTSGF 142
           S+ G  N H     E+LTDEMVIWFSSFH +GF
Sbjct: 121 SIGGEDNFH---IQEVLTDEMVIWFSSFHVAGF 138

BLAST of Csor.00g189920 vs. TAIR 10
Match: AT3G51325.1 (RING/U-box superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 1.9e-13
Identity = 37/83 (44.58%), Postives = 48/83 (57.83%), Query Frame = 0

Query: 57  EGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRR-TCPICRYSMEGGG 116
           E E C VCL  M  KD  +      LPCSHEFH +C+D WF   R+  CP+CR+S     
Sbjct: 22  EEECCSVCLMRMEAKDVIKS-----LPCSHEFHSLCVDTWFNVSRKICCPLCRFS----- 81

Query: 117 NNHEDGSNEMLTDEMVIWFSSFH 139
                 +  +LTDE+++WFSSFH
Sbjct: 82  -----PTTILLTDELLLWFSSFH 89

BLAST of Csor.00g189920 vs. TAIR 10
Match: AT4G32600.1 (RING/U-box superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.9e-08
Identity = 32/84 (38.10%), Postives = 47/84 (55.95%), Query Frame = 0

Query: 46  VAALSSPEKALEGE--TCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRT 105
           VAA +  E+A+ GE   CC+CL+   N ++        LPCSH FHK C+D+W  +   +
Sbjct: 346 VAAGTDNERAISGEDAVCCICLAKYANNEE-----LRELPCSHFFHKECVDKWL-KINAS 405

Query: 106 CPICRYSMEGGGNNHEDGSNEMLT 128
           CP+C+   E G  N +  S  +LT
Sbjct: 406 CPLCK--SEVGEKNSDLTSQGILT 421

BLAST of Csor.00g189920 vs. TAIR 10
Match: AT1G35630.1 (Protease-associated (PA) RING/U-box zinc finger family protein )

HSP 1 Score: 56.2 bits (134), Expect = 2.4e-08
Identity = 21/66 (31.82%), Postives = 35/66 (53.03%), Query Frame = 0

Query: 53  EKALEGETCCVCLS--CMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYS 112
           E++    TC +C+   C+G K         +LPC H++H +C+D W   CR  CP+C+ +
Sbjct: 225 EESSTSVTCAICIDDYCVGEK-------LRILPCKHKYHAVCIDSWLGRCRSFCPVCKQN 283

Query: 113 MEGGGN 117
              G +
Sbjct: 285 PRTGND 283

BLAST of Csor.00g189920 vs. TAIR 10
Match: AT5G45290.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 3.2e-08
Identity = 21/45 (46.67%), Postives = 29/45 (64.44%), Query Frame = 0

Query: 64  CLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICR 109
           C  C+   ++ + I T  LPC HEFHK C+D+W +E  R CP+CR
Sbjct: 490 CYICLVEYEEADSIRT--LPCHHEFHKTCVDKWLKEIHRVCPLCR 532

BLAST of Csor.00g189920 vs. TAIR 10
Match: AT1G24580.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.1 bits (131), Expect = 5.4e-08
Identity = 24/56 (42.86%), Postives = 34/56 (60.71%), Query Frame = 0

Query: 53  EKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICR 109
           E+  +G  CCVCL   G K+++E   + ++ C H FH+ CLD WF     TCP+CR
Sbjct: 59  EEEEKGVECCVCL--CGFKEEEE--VSELVSCKHFFHRACLDNWFGNNHTTCPLCR 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q91XF41.2e-0734.33E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1[more]
Q5XIL01.5e-0732.84E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 ... [more]
Q4R6Y52.0e-0734.72E3 ubiquitin-protein ligase ZNRF4 OS=Macaca fascicularis OX=9541 GN=ZNRF4 PE=2 S... [more]
Q9NVW22.6e-0744.83E3 ubiquitin-protein ligase RLIM OS=Homo sapiens OX=9606 GN=RLIM PE=1 SV=3[more]
Q9WTV72.6e-0744.83E3 ubiquitin-protein ligase RLIM OS=Mus musculus OX=10090 GN=Rlim PE=1 SV=2[more]
Match NameE-valueIdentityDescription
KAG6577791.15.16e-105100.00Protein goliath, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7015830.14.24e-10499.30Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_038906276.14.09e-7876.87E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida][more]
KAE8649999.11.26e-7577.86hypothetical protein Csa_010276, partial [Cucumis sativus][more]
KAA0052944.11.45e-7475.84E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa] >TYK11400.1 E3 ubiq... [more]
Match NameE-valueIdentityDescription
A0A0A0L4W71.59e-7977.93RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 P... [more]
A0A5D3CJ457.01e-7575.84E3 ubiquitin-protein ligase RNF13 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A6J1CW694.91e-5766.89E3 ubiquitin-protein ligase SDIR1-like OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A5D2RL259.29e-3143.54RING-type domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A0... [more]
A0A2I4FD423.54e-3044.44E3 ubiquitin-protein ligase RNF165-like OS=Juglans regia OX=51240 GN=LOC10899766... [more]
Match NameE-valueIdentityDescription
AT3G51325.11.9e-1344.58RING/U-box superfamily protein [more]
AT4G32600.11.9e-0838.10RING/U-box superfamily protein [more]
AT1G35630.12.4e-0831.82Protease-associated (PA) RING/U-box zinc finger family protein [more]
AT5G45290.13.2e-0846.67RING/U-box superfamily protein [more]
AT1G24580.15.4e-0842.86RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 61..107
e-value: 1.1E-4
score: 31.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 60..108
e-value: 3.0E-8
score: 33.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 61..108
score: 11.869652
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 46..124
e-value: 2.5E-14
score: 54.2
NoneNo IPR availablePANTHERPTHR45977:SF13GB|AAF27103.1coord: 32..113
NoneNo IPR availablePANTHERPTHR45977TARGET OF ERK KINASE MPK-1coord: 32..113
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 41..111

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g189920.m01Csor.00g189920.m01mRNA