Csor.00g189700 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g189700
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Mediator of RNA polymerase II transcription subunit 10
Location	Csor_Chr16: 9120643 .. 9130699 (+)
RNA-Seq Expression	Csor.00g189700
Synteny	Csor.00g189700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCAGCTCAGAATGCATCTTCTGCTGCCGGAACTGGTGGAAGTGGTGGGAATGGATCAGTCATCAATGATACTTCAGCATCAACTACTGTGGATGATTCAAAGCAAAACTTGAACCAAGTAATCAATTCCATACAGAAAACTTTGGGTATCCTCCATCAGCTCAACCTCACCGTTTCTAACTTCAATGCTGCCTATCAGCTGCCTCTTTTACAACGCCTGTACGTCCAGTTTTGCTTCATCTAATGTCTGATTCGTTCATTATTCACTACTTGTTCCACTCTATATCAGTGATATGTTTTTGGATTTTGCAGTAATTCTCTCGTTTTGGAGCTTGATAACATGGTTAAATTATCAGAGAAGTGCACCATCCAGGTCCCTATGGAGGTTGTTAAGTGAGTCTTTGTACACCTATTCTGGTTTCTAGCTTTGCAAGCGTATTTTTTTATATTATTATTATTTTTTAACTCTTCTATTCTTCTTGGCCCATTTCTTACTTTTCTTTTGATTAGCTTGATTGATGATGGGAAGAATCCAGATGAATTCACGAGGGATGTCTTAAATAGTTGCATTGCAAAAAATCAAAGTACAAAAGGCAAAACTGATGCCTTCAAGGTAGTCTTTACATCTCTATGGGGCATACTGTTAAAAATCTACTTATACCTTTTTTTTCTTTTATCTTGATTCCAAAGATTCAAGAAAATATTTATTGAATGTTGTACTGCTTACCATATTCAGGGCTTACGGAAGCATCTTTTGGAGGAGCTTGAACAGACATTTCCTGATGAAGTTGAGTCTTATAGAGAAATTCGTGCTGCTTCTGCTGCCGTGAGTTGAAATTTGTTTCCTGCTGTCAATTTTATCTCTACCTTCAAATTTTTCTATATATATATTTCATTTCAAACTGATCAAAATATTTTCTACACTTTTATGGTTTAATTTTTTACTTTATCTATAGCCATAAGCTATATGTATTTTCAAAGTTCGCCTCATCCTTTCACAAGCATTTCTTGGCCATTTATATCTTTTTGGTGGTTTTGGATATAACATCAGAGGTGAAAAATGTAAACTATGTTATGGTGTCAGTTCTAGGTATAGTTGGAGGATGTTCATTACTTTAATTTTATTGTATGTTAAGTTATTAAGACTCACATACTCTTTAGACTGTTCTACTACACGTAGGAGTGGTTTTAATATAAGATATTGGACAAGTTCTGTTCTGTTATTTTGAGCTTGGTTGCAGGTTATAGTTACTTTGTTGTATGGTTTACGTTGGTTTTTTCTTAGTGTCAAAAAATAAGAGGAAACAAGTAGCATGTTTGTTTTATGATTCATAGGTTGATTGAATGCTCTGCTTGCTTAAAAACTACTTTCTGGTTATTTTTTAAACATCTCTCAAGCCAATTTTACCTCAAAAATATTTTCCTTTATGAATAAAATGGCTTAATGAATTTAGAATCAGATTAAACTATTTTATTTTCTAGTTTGTTGAGCAAAGTTTTGTAATTAGCTTTTATGAAGTAAAGAACTTGGAGTACTTACTGCCTCTAATTGTATAACCATCTTTCCACTTTCGGTGCATAGTAAATATTTTGTGATATCAAGGTCTGTTGTTCACGTGCCCCAGTGGAAATTAGGGTACTGAGTTTTTTTTTTTTTTACTTGGTGGTAGTTTTAAGTTTCACTATTCATGTCGGTGCCATAGCTAAGTGTTATTGTATCATTGCTCCTTTCAAGTGAATTAAACTTATATTGCATAAGGACATTAGAACGAGAATGAGTCCTGTCCTTGTGACTTAGATACCAAAAATTTGATCGGAGCTGAAATTTTAATGCAATATCAGTGGAATACACAAGATATAACCTCTTACGGGCACAAAAATTTCCCAACTATGTATACATACTACATCCATCTTGCTTTAGATAAGAGGTTCTTCTGCAATCATTGCTTAAATATCTTCTTCTAGAGGGCAACCATAGAATCCAATTGTCAAGTCCTTTCCTGTCTTCAAGTAAGTTGGCCTTTAAAATTTTCACCATGGATTGGTGGCTTTCTTGATAAATGTCAGCAAGAGGTGTAGAATTTAATTCATGCCCATACGAGTTCAGTTCATCTTCGCCCATCTTTTTCTGTTTGTGTCCTTTGATTGTGCTGTCTAGTTGAATTGTTTGATTTCTCCCATTCCACTATCAATCCAACCCGTAATATTGGTCAAATGTATGGGCAAAAGAAGCACATAAATCATGCCAATATTTTCCTATTTTCCAGATCAATCAACACCCAACCCCAAAAACTATTCCCAACTGTAATTTGCACTATTTGTGGATCTCCTCATCTTTCCACTCCAACCTAGCGTTATCAGGTATGAGGGCTCTAGCCTCATTGGAAGAGGGAAATTAAGCTCGAGTGATGCAAGGTGTCTTTACAAAGGTGCTAAAACTTCGATCCCCATCCATAAATGCAATTCCCAAAATGAGATCATATGATTCTAGCCACCATTGTCAGATGATTTTGGTCTCTGTGGAATCGGTCCGAGTATTGGCTTGATTTGCGTGCTACTTTTGCCCATACATTTGAGCTATATTTCCTATTTCCCAGATCATTTTCTGAGATCAAATGGCTGGATATCAATTTGATTGAAATTTGATGGGAAATAAACCTGGATTGCTATATTAAAACATGTGGGTGATAACCTTTTTAGACGACTGTTCCTTTCCTTCAACATTTACTAACAAACTCATCATCTTATAGCTTTGTGCCCATAGCATGTATGAGTATGGGAAACCAAAAACTTCTACTTTTTTTGGACAGCTAGTGAATCAATTATAACTATAAAAGACATAAGGATGTACTATATCAAAAACTCTTGTTTTTTATTTGTTTCTTTTACGAATTTTCACTTAATTCATCAACATTTCCGTATAAGTACATCGTTCATTATGTTTTTGTGTTATTGCGTTCGAATTTTAATCTTGTTTCAACAAATGCAGGAATCAAAAAGGATAGCGCAATCACAAAGTATGTTGCCAAACGGGGACATGAAGGTTAAGATGGAGATTTAAGTGCTTTCTGCGTTGATTATCAGGTCTTTGAAGTTCTTCTCTACTGTTATTCTTTATTATGTCTTCAGCATATATACGTATTGATTGATTGGCCAGCATATATCACACGATTTTTAGTTTCATTCAACGGATTGACAATGGAATAACATAACCCTTCTTTATAAACGTGTGTAAAAGAGAATAACATCATCCTCTATTATATTACTGTCTATAACCTTGCTAGGGAGAGGCGTTTCGTATGCTACAATGGGACGACTTATTGAGGAGAAGATGGTTATATTTTGTGTTGCTGATATGTATCCATCATTTTAGTACTTTGATTTCGAGTTTCTTGAGCATATAGAAATCCGTGTTTCAGTGCTTTCGGAATGTGAAAAGAGATTTATACTCAAATAGGAGTTCGATATCTAATATGGTGCTCAACTTGAGTAACCAATAGTATACGTCTTTCCGGAAAGTCAAATGATTGAATCTCTATTATGAATAATGTTTGAATCTCTATTATGACAGGGAATTCGTTCTTATTTTATACCCAATTAAGTTGAAAAGACCTTTTCAGGATCGATTTTTCTCGCTCGAAATAGGTGAGGTGGGCTGTATCTTGGTTTCTCTAGTGGGGAGACAACGTGGGATTTGATAGCGGCTAATGAAGTTATACTGCAAAAGCCACACACAAGAAAAAGATTTAATGGCCCTGGCCCTATTCGTATTCGTATTCGTTTTCGTATTCGTATTGATTGGGCCAATCAAGGCGGAGAAGAATCACAATCCTCAAATGTTGAACTTTTGATTTTACTGGGCTCAACCCCTTCTGTTTGTTTGATTCAAGTTTTATTTTATATTTTTACTTGGTATGTGCATCTTTTCTCAACTGGATTCTCACTTTTCTGTTAATAAGCATTGTAAATTCGTGTACTAATTCTTTGCCTCATTTCAGTCTCTTTGAATCTCATCTTTACCATGCTGAATAGGTGAAATTATACAAGAATACCAAAATTTGGGGACGAGTTGTGCCGCACTTGTTGAGCGAACAAGTCAATCATATGAAAATCGAACTTTACGGACAATCTCGACGTAATCATGTTTAATTTATAAAACGTAAATTGAAAACACAATCATGTTTTAATTTATAAAACGTAAATTGAAAACACGTGGGTAAGAAATTTGTTGGGTGAGGTTTGGCAATTACTTAGTCATTTATAGTATATTTTGAGTAAACAAGCACGACCGTAATAGTGAGTGAGTTTCGAGCGAACGAAACGACATTTTATGGCAATTCAAAAGAAACGACTGCATCTGCGATCGATCCTCGGTAATCAGGTGGCGGTAGTCATCTCCTTTACTCTTGAACCGGCATGGAGGTTTCTTCTGAACCGGCAAAGCTTCTTCACCATAACGATCACAATTTGAAGGAAGTTCAGGCTACTGTTTGTTTAAAAGAAGAAAAAAAGGAGCTGTGGCTTTGAACTGAACCATGAAGATTTGGGCTTTGGGCCTAGCAGAACGACGTCGTTGCAGTTCTATCTGAGCTGCAGAGGCATTTTTTTCATTTTTCATTTAAATAAAAAAAGAAAAAGAAAAGAAAAAAAGAGCGGAGGCTTTGAATTAGACAATAAAGATTTGGGCTATTGGGCTTTGGGCTTTGGACTTTGGGCTATTGGGTTTTGGGCTTTTCCACCAACCGAATTGAAAATTAAGGAATTAAATAAAAGAAAAAAGAATACATAAATAACGGCTATCTGGCACTCAATTTACGAAACGCAGAGAAGAAAGAAGAGTGTTCGTTGAAGAAGGCGATGCTATGATATGAAGGCTTCGAAGTGGTAGCAATACATCAATTAATTTCAGGTATCACCTCTTCTTATACACAACTCTGTATCTCGAGGATTTCACTTTCTAAACCAACTGTTCTGCCTTGCTCCTGCGATGAAACCTAATCGATTCGTCGTCTAATCAGGACGCCCAGGGCCCTCCTCAGGAGCCTGTTTTGAAAGCAATTTCAGGTTTCTACCTTATCCTCATGCTAGGCTTCGGAATGGTAAGCAATGAATCAATTAATTTCAGGTATCACCTCTTCTTATACACAACTCTGTCTGTTCATTTCCTTGTGTGAGCTTCTAACTGTTCATGCTCATGTTTCTATTTCACAACGATTGTTCATCTACGCCACATAATTGATTACTTGTTCGTTCGATATTTAGTTCCTTTTAATGTTAATTTAAGTGCAGACAGACTATATATCCACACCACACCACCCCAACTCATCACTGTTGCTGCTGGTTTGGAGGTATTACAATTTTCCTTTTAGTGTCTCTTTCTATTCTTTTAATTGACTATTGATTATTGATTATTTTGGTTGGAGTATGTGTCTGATTTTTGTAAGATCCTAAGATCCTGTGTTTGATACTTCAACATTGCTTAATTTTCTAGTGACACTTCAAGTTTTCTTTCGTATATTACTTCCACGTTATGTTATTATTGTTATCTGTAATGTGTGACTGAGATTTACTTAGAATGAATATTAGCATTATTATATGATAGATTAAGCCTAATTAATTCATACATTTTTCAGTGCATCCATCTAACTTCCGGTGGTTCTTGTGTTTATGATCCTTGAGCTTGGTATGGGCTAGATCCATTTGATTTTAATGCTAATGGACTCAATTTGTGTGCCTGGGCTCATGTATATTAAAGTGGCACAGTTTGATTTGATTTTTCCCCAAAAATGGTGGAGTTTCTGTTGAGTACATGATCAGATGGTGAATTTAGTTTCAGCTGGGAAGGCCCAAAAGGAACAGGAAACAAAGTTCCGACTAGACTATACAACCTTAGAAGAATGCAGGCAGTAACCTCATGAGATCGCTTGAAATGCCCATGGCTATTGATTAGTTCATCCAGTTAAAGTAAATCTCGAACTCTTAGCTTTAGATTTCAATGTATTTTCTTCTGCTTTTATCAAGTAATCTTGACTCTGTCACACACGCTACTGCTAAATTTCCAGTGTTTGGTCTGCTCCGCATACGCTCATGCAAGTATAGCTTCTCGGAAAGACAGCTCAAATGTCGGTAAGAAACAATCAACTTTCAGTTATACAAGCAAATATAGCTTCTTGGAAAGTCCGCTCAAATGTCGGTAAGAAACAATCAACCTTCAGTTATACTAGTTACACAGTCTTGTGGCCTATATCGGTAATTTAATGATATGAATCCAAGGCGCTTATCATTTAATCTCTCCATATGTGTCTCTCCACTTGTATAGTTGGGAGATGGTGGAATGCTTTTTCAATTGCAGTTTGTTAAATTTATCATTTTAACTTGTGTTACACGTGCATCATTGTCGAAAATAGTTAGTTTTCTCTTAAATTTTGTATATTTTATATCATTTTTCTTAAATAATCACTTTCCCTAAAGTCTATCTTCATTCTTTTTGTAGGAATTTAATTTAGACATGTGAATGTGAACACGACTCTTCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTGTGAATACGACTCTCCACAATGGTATGATACTGTCCACTTTGAGCATAAGCTCTCCTGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATACCGATGGAGATAGTATTCCTTGATTATAAACCCATGATCATTCCCTAAATTAGCCGATGTGGGACTTTCATCATCCAACACCTCCCCTCGAACAAAGTATGCCTCCCCTTAGTCGAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTTACTATGCCTTCGAGGAGGGTTGACTCTTTTTCTTTTGGAGTCCTTTGTTCGACATTTGAGGATTTACCAATTTATTGGCACGACTAAGTTTTAGGGCATGGCTCTGATACCATGTTAGATGAACACGACTCTCCACAATGGTATGATATTATCCACTTTGAGCATAAGCTCTCATGGGTTTGCTTTGGGCTTCCCCAAAATGCCTCACACCAATAGAGATAGTATTCCTTGATTATAAACCCATGATTATTCACTAAATTAGACTTTCATCATCCAACACACTTATTTATATTTTATCCCCTGTAACTTACTACTGATTAGTACAATATTGACAAAGAAAGTTATGATCTGATCCGTGCACTAATCTTTTCAATGGTTTACTTTTCTCTCTTGCTTTCTCTTTTTTCACACATTTTTGTAAATGTATTGTTGTTTGTATTCTTATCTATAATCTTAGTAGAGTATACTTAGGAATGTTATTGATTTAGCCAACTTAATCACAATGACACAACAAAGATGGAGACTGCCGGGGAGGTTCGTACATCATTCTTCTTCTTTGTTGTTTGTTTTGTCGATCCTATATTTCTCTTATGACTTTTGTTTGTGAGTTTTTTGATTTATAATGAGTTTTTATTTATTTTTTATTTTTTTATTTTTGGTTTAGTGCTTTCTATATATATATTTTTTTCTTTCATATTATAAATTTATTGTGGTTAGTTTGTGTATTTGTATTTTGATTCTAAATCTTTGTTATTATTTGTTTGAATTTTGATTGCTTGAGATGATTCTGCTTGGTATGGTTCCATATAGTATTGAATGTGAAGTGTTTGATCTTTTTTGTTTTATTTTTTTTTTTGTGCATGTTGTTTGTTTTATTTATCTTATTTTTTTCCCTCTTGCAATTTTGTCTGAGTTCTTTAATTTGTAATTTTAATGGAGCTTTGTTTTCTTTTCTTTTTTTTACTTTCATTTATAAATTTGTTGTTTCTTTTTTATAATTTTATTTTGATTCTAAATGTTTGTCATTGTTTATTTTCTTTTATTTTATAAATTTATTGGGCTTGTTTTGATATTTTTATTTTGATTCTATATTTTTGTGATTGTTTGTTTGAATTTTAATTCATTGTGATTGTGATGGGATTGTGATGCTATTGAAGGGTTTAATATTTTCTGTTTTTTTTTTTTATTTTTTTTTATTATTTTTTTTATTTTTACATTGTTTGCTTTGTTTATTTTATTTATAATTTTGTCCATGAGTTCTTTGATCCCTAATTTTAATGGAGTTTCATTAGTTAATTGATTTGTTATTTTCTTGATTTTTTTTTCTTATCGTTAATTAATTTGTAATTTTTTATTTGTATTTTGATCTTAATTTTTTTTTGTCATTGTTTGTTTGAATTTTGATTGTTTGTGATGTTTTTGTTTGTTTGAATTTTAATTATTTATGATGTTTTTATTTATTTGAATTTTGATTGTTTGTGATGTTTTTGTTTGTTTGAATTTTAATTGTTTATGATGTTTTTATTTATTTGAATTTTGATTATTTGTAATGTTTTTGTTTGTTTGAATTTTAATTGTTCATGATGTTTTTATTTATTTTAATTTTGATTGTTTGTGATGTTTTTGTTTGTTTGAATTTTAATTGTTTACTATGTTTTTATTTATTTGAATTTTGATTGTTTGTGATGTTTTTGTTTGTTTGAATTTTAATTGTTTATGATGTTTTTATTTATTTGAATTTTGATTATTTGTAATGTTTTTGTTTGTTTGAATTTTAATTGTTCATGATGTTTTTATTTATTTTAATTTTGATTGTTTGTGATGTTTTTGTTTGTTTGAATTTTAATTGTTTACTATGTTTTTATTTATTTGAATTTTGATTGTTTGTGATGTTTTTGTTTGTTTGAATTTTAATTGTTTATGATGTGCATGTTATTCTTTTTGAATTTTGATTTTTTTTTTATGTTGTTTGCTTTGTTGATCCTAGTTTTTCTTTTGTGGTTTTTGTGTGAGTGATTTTATCTGTAATCTCAATGGTTTCCTGTAACGTTTGCTTCTATTTCATGATTATTTTTTCTTTTTCATGTTATAATTTTATTGGGGTTTGTGTTTTGATATTTGTATTTTGATTCGAAATTTGTGTGAGTGTTTGTTTGAATTTTGATTCTTTGGGATGATTTTGCTTGATATGTTCCTCTTAGTATTTAATTTGAAATGTTTGATTTTTTACTCTGTTTTTGTTCTTTTATTTATATTGTTTGTTTTGTTGATATTGTTTCTCCCCATTGTTATTATTGTTATTATAATGTGAGAAGGTTAGTTGAATGATTTGCTACTTTCTCTTCAATCAATTTTTTTTTTTTTTTGTTTATAAATTGACTGTGGTTTTCTTATTATGTATTTTGATTTAGATCTTTGATATTGTTTGTTTGAAAAAATTTACCGTGGTTTCCCTTTTATGTATTTTGATTTAGATCTTTGATATTATTTGTTTGAATTTTGATTGCATGTGATAATTTTGTTCGGAGTTGTTTCGTTTAGTATTAAATTTGAAGTGTTGTTTGCCTATTGCTTTCCCGGTCTTATAGAGTTGTGATATTTATATTCTCAATTCTTGGTTATAAAATATAAGAATCATGGATAAATTGCTTCGGTTTGTGTTTTTTTTTTTTGTCTATTAAATTTTGATAATTTTGTAAATGTTAAATTTTGATAATTTTGTAAATGTTATGGTGCTAAGATGTCCTTGATTGTCGTGATATTTTGCTTGCCACATATAGTCTTGTTTTTTGATGTTATATGTTTAGCTCCAATTTATTTCTTTCTCGGGCTTTTAATTATTGTTTTCCGACATATGTGAAGAAAATTACAGATTTAATGAAGTTAGGAAAGAGGCAAATGAGGAGATAAAAAGAAGGAAGTCAGGTAGTTATTGCACGTGTTTTACTAATCTTCCCACACTTTTTCAAAATTTAAATTAATTTATTCAATCTTAATTTTCAGTTCTTGTTAATTATTGGTTTGTTGAAAATATGTGAAAAAAATTACAGATTTAATGAAGTCGGGCAAACGAGGAGATGAAAAAGGAAGTTTCAACTCCCATGGAGGTGGTGGTTGACAGGTAGCTGTGGCACTTCATTACTAATTTTCCAACTAACTTAGCTTATTTTTAGGTTCTTGTTCATCATTCTTTTGCCTAAATATAGATTTAATGAAATCAGCTCAGAGGCAAATGAGAGGATGA

mRNA sequence

ATGGATTCAGCTCAGAATGCATCTTCTGCTGCCGGAACTGGTGGAAGTGGTGGGAATGGATCAGTCATCAATGATACTTCAGCATCAACTACTGTGGATGATTCAAAGCAAAACTTGAACCAAGTAATCAATTCCATACAGAAAACTTTGGGTATCCTCCATCAGCTCAACCTCACCGTTTCTAACTTCAATGCTGCCTATCAGCTGCCTCTTTTACAACGCCTTAATTCTCTCGTTTTGGAGCTTGATAACATGGTTAAATTATCAGAGAAGTGCACCATCCAGGTCCCTATGGAGGTTGTTAACTTGATTGATGATGGGAAGAATCCAGATGAATTCACGAGGGATGTCTTAAATAGTTGCATTGCAAAAAATCAAAGTACAAAAGGCAAAACTGATGCCTTCAAGGGCTTACGGAAGCATCTTTTGGAGGAGCTTGAACAGACATTTCCTGATGAAGTTGAGTCTTATAGAGAAATTCGTGCTGCTTCTGCTGCCGAATCAAAAAGGATAGCGCAATCACAAATGCTTTCTGCGTTGATTATCAGGGAATTCGTTCTTATTTTATACCCAATTAAGTTGAAAAGACCTTTTCAGGATCGATTTTTCTCGCTCGAAATAGGCTTCGAAGTGGTAGCAATACATCAATTAATTTCAGGACGCCCAGGGCCCTCCTCAGGAGCCTGTTTTGAAAGCAATTTCAGGTTTCTACCTTATCCTCATGCTAGGCTTCGGAATGTTCATCCAGTTAAATGTTTGGTCTGCTCCGCATACGCTCATGCAAGTATAGCTTCTCGGAAAGACAGCTCAAATGTCGAAAATTACAGATTTAATGAAGTTAGGAAAGAGGCAAATGAGGAGATAAAAAGAAGGAAGTCAGATTTAATGAAGTCGGGCAAACGAGGAGATGAAAAAGGAAGTTTCAACTCCCATGGAGCTCAGAGGCAAATGAGAGGATGA

Coding sequence (CDS)

ATGGATTCAGCTCAGAATGCATCTTCTGCTGCCGGAACTGGTGGAAGTGGTGGGAATGGATCAGTCATCAATGATACTTCAGCATCAACTACTGTGGATGATTCAAAGCAAAACTTGAACCAAGTAATCAATTCCATACAGAAAACTTTGGGTATCCTCCATCAGCTCAACCTCACCGTTTCTAACTTCAATGCTGCCTATCAGCTGCCTCTTTTACAACGCCTTAATTCTCTCGTTTTGGAGCTTGATAACATGGTTAAATTATCAGAGAAGTGCACCATCCAGGTCCCTATGGAGGTTGTTAACTTGATTGATGATGGGAAGAATCCAGATGAATTCACGAGGGATGTCTTAAATAGTTGCATTGCAAAAAATCAAAGTACAAAAGGCAAAACTGATGCCTTCAAGGGCTTACGGAAGCATCTTTTGGAGGAGCTTGAACAGACATTTCCTGATGAAGTTGAGTCTTATAGAGAAATTCGTGCTGCTTCTGCTGCCGAATCAAAAAGGATAGCGCAATCACAAATGCTTTCTGCGTTGATTATCAGGGAATTCGTTCTTATTTTATACCCAATTAAGTTGAAAAGACCTTTTCAGGATCGATTTTTCTCGCTCGAAATAGGCTTCGAAGTGGTAGCAATACATCAATTAATTTCAGGACGCCCAGGGCCCTCCTCAGGAGCCTGTTTTGAAAGCAATTTCAGGTTTCTACCTTATCCTCATGCTAGGCTTCGGAATGTTCATCCAGTTAAATGTTTGGTCTGCTCCGCATACGCTCATGCAAGTATAGCTTCTCGGAAAGACAGCTCAAATGTCGAAAATTACAGATTTAATGAAGTTAGGAAAGAGGCAAATGAGGAGATAAAAAGAAGGAAGTCAGATTTAATGAAGTCGGGCAAACGAGGAGATGAAAAAGGAAGTTTCAACTCCCATGGAGCTCAGAGGCAAATGAGAGGATGA

Protein sequence

MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQMLSALIIREFVLILYPIKLKRPFQDRFFSLEIGFEVVAIHQLISGRPGPSSGACFESNFRFLPYPHARLRNVHPVKCLVCSAYAHASIASRKDSSNVENYRFNEVRKEANEEIKRRKSDLMKSGKRGDEKGSFNSHGAQRQMRG

Homology

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BLAST of Csor.00g189700 vs. ExPASy Swiss-Prot
Match: F4HPA7 (Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana OX=3702 GN=MED10B PE=1 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.2e-60
Identity = 132/179 (73.74%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSV---IND-TSASTTVDDSKQNLNQVINSIQKTLGILHQL 60
           MD  QN S  AG GGS  NG++    ND TS  T  DDSK+NL+QVINSI+KTLG+LHQL
Sbjct: 1   MDPTQNTS--AGIGGS--NGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQL 60

Query: 61  NLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRD 120
           +LTV++F  A QL LLQRLNSLV+ELDNM KLSEKC IQ+PMEV+NLIDDGKNPDEFT+D
Sbjct: 61  HLTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 176
           VLNSCIA+NQ TKGKTDAFK LRKH+LEELEQ FPDEV+ YREIRA+SAA +KR+AQSQ
Sbjct: 121 VLNSCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAVTKRLAQSQ 175

[Close]

BLAST of Csor.00g189700 vs. ExPASy Swiss-Prot
Match: Q9FHZ2 (Mediator of RNA polymerase II transcription subunit 10a OS=Arabidopsis thaliana OX=3702 GN=MED10A PE=1 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.5e-55
Identity = 123/176 (69.89%), Postives = 144/176 (81.82%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MD  QN  + AG G    NGS+  + +A  TVDDS + LNQ+INS QK L +LHQL LTV
Sbjct: 1   MDQTQN--TIAGIGEI--NGSIKTEINAIATVDDSNEKLNQIINSNQKILELLHQLKLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLN- 120
           S+F  A QL LLQRLNSLV+ELDNM KLS+KC IQVP+EV+NLIDDGKNPDEFT+DVLN 
Sbjct: 61  SSFTPASQLHLLQRLNSLVMELDNMAKLSDKCNIQVPIEVLNLIDDGKNPDEFTKDVLNK 120

Query: 121 SCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 176
           +CIAKNQ TKGK+DAFKGLRKHLLEELEQ FPDEV+ YR+IRA+ AAE+KR+AQ+Q
Sbjct: 121 NCIAKNQVTKGKSDAFKGLRKHLLEELEQAFPDEVDRYRDIRASYAAEAKRLAQTQ 172

[Close]

BLAST of Csor.00g189700 vs. ExPASy Swiss-Prot
Match: Q16G71 (Mediator of RNA polymerase II transcription subunit 10 OS=Aedes aegypti OX=7159 GN=MED10 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.1e-16
Identity = 42/123 (34.15%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 39  LNQVINSIQKTLGILHQLNLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPM 98
           L  + N ++  +  + Q+ + VS+F    Q  L Q++ SLV  L  + KL  +  + VP+
Sbjct: 5   LENLENHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQVDVNVPL 64

Query: 99  EVVNLIDDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYR 158
           EV + ID G+NP  +T+D ++  + KN+  KGK D+++  + +L++EL++TFP E+  Y+
Sbjct: 65  EVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYRKFKSNLMKELDETFPTEIAKYK 124

Query: 159 EIR 162
            IR
Sbjct: 125 AIR 127

[Close]

BLAST of Csor.00g189700 vs. ExPASy Swiss-Prot
Match: Q7Q5R5 (Mediator of RNA polymerase II transcription subunit 10 OS=Anopheles gambiae OX=7165 GN=MED10 PE=3 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 9.1e-16
Identity = 42/123 (34.15%), Postives = 74/123 (60.16%), Query Frame = 0


Query: 39  LNQVINSIQKTLGILHQLNLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPM 98
           L  + N ++  +  + Q+ + VS+F    Q  L Q++ SLV  L  + KL  +  + VP+
Sbjct: 5   LENLENHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQIDVNVPL 64

Query: 99  EVVNLIDDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYR 158
           EV + ID G+NP  +T+D ++  + KN+  KGK D+++  + +L++EL +TFP E+  Y+
Sbjct: 65  EVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYRKFKSNLMKELSETFPVEISKYK 124

Query: 159 EIR 162
            IR
Sbjct: 125 AIR 127

[Close]

BLAST of Csor.00g189700 vs. ExPASy Swiss-Prot
Match: Q9CXU0 (Mediator of RNA polymerase II transcription subunit 10 OS=Mus musculus OX=10090 GN=Med10 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.9e-14
Identity = 43/117 (36.75%), Postives = 70/117 (59.83%), Query Frame = 0


Query: 46  IQKTLGILHQLNLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKC-TIQVPMEVVNLI 105
           ++K +  + QL + VS+F  + Q  L Q+LN +V  L ++ K  ++   I VP+EV   I
Sbjct: 12  LEKFVENIRQLGIIVSDFQPSSQAGLSQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYI 71

Query: 106 DDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIR 162
           D G+NP  +T++ L   +AKN+  KGK D  K  +  L++EL + FP+++  YR IR
Sbjct: 72  DQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVFPEDMAKYRSIR 128

[Close]

BLAST of Csor.00g189700 vs. NCBI nr
Match: KAG6577769.1 (Mediator of RNA polymerase II transcription subunit 10b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 601 bits (1549), Expect = 4.69e-216
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQMLSAL 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQMLSAL
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQMLSAL 180

Query: 181 IIREFVLILYPIKLKRPFQDRFFSLEIGFEVVAIHQLISGRPGPSSGACFESNFRFLPYP 240
           IIREFVLILYPIKLKRPFQDRFFSLEIGFEVVAIHQLISGRPGPSSGACFESNFRFLPYP
Sbjct: 181 IIREFVLILYPIKLKRPFQDRFFSLEIGFEVVAIHQLISGRPGPSSGACFESNFRFLPYP 240

Query: 241 HARLRNVHPVKCLVCSAYAHASIASRKDSSNVENYRFNEVRKEANEEIKRRKSDLMKSGK 300
           HARLRNVHPVKCLVCSAYAHASIASRKDSSNVENYRFNEVRKEANEEIKRRKSDLMKSGK
Sbjct: 241 HARLRNVHPVKCLVCSAYAHASIASRKDSSNVENYRFNEVRKEANEEIKRRKSDLMKSGK 300

Query: 301 RGDEKGSFNSHGAQRQMRG 319
           RGDEKGSFNSHGAQRQMRG
Sbjct: 301 RGDEKGSFNSHGAQRQMRG 319

[Close]

BLAST of Csor.00g189700 vs. NCBI nr
Match: KAG7015809.1 (Mediator of RNA polymerase II transcription subunit 10b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350 bits (897), Expect = 2.06e-118
Identity = 196/246 (79.67%), Postives = 202/246 (82.11%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQMLSAL 180
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAA              
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAA-------------- 180

Query: 181 IIREFVLILYPIKLKRPFQDRFFSLEIGFEVVAIHQLISGRPGPSSGACFESNFRFLPYP 240
                      +++K+      +  + G E         GRPGPSSGACFESNFRFLPYP
Sbjct: 181 -----------VRIKKDSAITKYVAKRGHE---------GRPGPSSGACFESNFRFLPYP 212

Query: 241 HARLRN 246
           HARLRN
Sbjct: 241 HARLRN 212

[Close]

BLAST of Csor.00g189700 vs. NCBI nr
Match: XP_022923485.1 (mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923486.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923487.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923488.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923489.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923491.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923492.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022965379.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965380.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965381.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965383.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965384.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965385.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965386.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_023553208.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553209.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553210.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553211.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553212.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323 bits (828), Expect = 2.54e-108
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 175
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 175

[Close]

BLAST of Csor.00g189700 vs. NCBI nr
Match: XP_008448559.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo] >XP_008448560.1 PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo] >XP_008448561.1 PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo])

HSP 1 Score: 316 bits (809), Expect = 1.96e-105
Identity = 170/175 (97.14%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTS STTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 175
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAE+KRIAQ+Q
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQ 175

[Close]

BLAST of Csor.00g189700 vs. NCBI nr
Match: XP_038876576.1 (mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida] >XP_038876578.1 mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida] >XP_038876579.1 mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida] >XP_038876580.1 mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida])

HSP 1 Score: 315 bits (808), Expect = 2.78e-105
Identity = 170/175 (97.14%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGS GNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSSGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCAIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 175
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAE+KRIAQ+Q
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQ 175

[Close]

BLAST of Csor.00g189700 vs. ExPASy TrEMBL
Match: A0A6J1HLJ2 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita maxima OX=3661 GN=LOC111465259 PE=3 SV=1)

HSP 1 Score: 323 bits (828), Expect = 1.23e-108
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 175
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 175

[Close]

BLAST of Csor.00g189700 vs. ExPASy TrEMBL
Match: A0A6J1E6X8 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita moschata OX=3662 GN=LOC111431167 PE=3 SV=1)

HSP 1 Score: 323 bits (828), Expect = 1.23e-108
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 175
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 175

[Close]

BLAST of Csor.00g189700 vs. ExPASy TrEMBL
Match: A0A1S3BJY3 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis melo OX=3656 GN=LOC103490703 PE=3 SV=1)

HSP 1 Score: 316 bits (809), Expect = 9.49e-106
Identity = 170/175 (97.14%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTS STTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 175
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAE+KRIAQ+Q
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQ 175

[Close]

BLAST of Csor.00g189700 vs. ExPASy TrEMBL
Match: A0A6J1CVZ0 (Mediator of RNA polymerase II transcription subunit 10 OS=Momordica charantia OX=3673 GN=LOC111014791 PE=3 SV=1)

HSP 1 Score: 313 bits (803), Expect = 7.74e-105
Identity = 167/175 (95.43%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSAS TVDDSKQNLNQVINSIQKTLG+LHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLV+ELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDV+NS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 175
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAE+KRIAQ+Q
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQ 175

[Close]

BLAST of Csor.00g189700 vs. ExPASy TrEMBL
Match: A0A0A0L3Q2 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis sativus OX=3659 GN=MED10 PE=3 SV=1)

HSP 1 Score: 314 bits (804), Expect = 4.35e-104
Identity = 169/175 (96.57%), Postives = 172/175 (98.29%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDT  STTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 61  MDSAQNASSAAGTGGSGGNGSVINDTPVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 120

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 121 SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 180

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 175
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAE+KRIAQ+Q
Sbjct: 181 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQ 235

[Close]

BLAST of Csor.00g189700 vs. TAIR 10
Match: AT1G26665.1 (Mediator complex, subunit Med10 )

HSP 1 Score: 237.7 bits (605), Expect = 1.3e-62
Identity = 133/179 (74.30%), Postives = 152/179 (84.92%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSV---IND-TSASTTVDDSKQNLNQVINSIQKTLGILHQL 60
           MD  QN S  AG GGS  NG++    ND TS  T  DDSK+NL+QVINSI+KTLG+LHQL
Sbjct: 1   MDPTQNTS--AGIGGS--NGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQL 60

Query: 61  NLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRD 120
           +LTV++F  A QL LLQRLNSLV+ELDNM KLSEKC IQ+PMEV+NLIDDGKNPDEFT+D
Sbjct: 61  HLTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 176
           VLNSCIA+NQ TKGKTDAFK LRKH+LEELEQ FPDEV+ YREIRA+SAAE+KR+AQSQ
Sbjct: 121 VLNSCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAEAKRLAQSQ 175

[Close]

BLAST of Csor.00g189700 vs. TAIR 10
Match: AT1G26665.2 (Mediator complex, subunit Med10 )

HSP 1 Score: 235.0 bits (598), Expect = 8.6e-62
Identity = 132/179 (73.74%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSV---IND-TSASTTVDDSKQNLNQVINSIQKTLGILHQL 60
           MD  QN S  AG GGS  NG++    ND TS  T  DDSK+NL+QVINSI+KTLG+LHQL
Sbjct: 1   MDPTQNTS--AGIGGS--NGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQL 60

Query: 61  NLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRD 120
           +LTV++F  A QL LLQRLNSLV+ELDNM KLSEKC IQ+PMEV+NLIDDGKNPDEFT+D
Sbjct: 61  HLTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 176
           VLNSCIA+NQ TKGKTDAFK LRKH+LEELEQ FPDEV+ YREIRA+SAA +KR+AQSQ
Sbjct: 121 VLNSCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAVTKRLAQSQ 175

[Close]

BLAST of Csor.00g189700 vs. TAIR 10
Match: AT5G41910.1 (Mediator complex, subunit Med10 )

HSP 1 Score: 218.0 bits (554), Expect = 1.1e-56
Identity = 123/176 (69.89%), Postives = 144/176 (81.82%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MD  QN  + AG G    NGS+  + +A  TVDDS + LNQ+INS QK L +LHQL LTV
Sbjct: 1   MDQTQN--TIAGIGEI--NGSIKTEINAIATVDDSNEKLNQIINSNQKILELLHQLKLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLN- 120
           S+F  A QL LLQRLNSLV+ELDNM KLS+KC IQVP+EV+NLIDDGKNPDEFT+DVLN 
Sbjct: 61  SSFTPASQLHLLQRLNSLVMELDNMAKLSDKCNIQVPIEVLNLIDDGKNPDEFTKDVLNK 120

Query: 121 SCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRIAQSQ 176
           +CIAKNQ TKGK+DAFKGLRKHLLEELEQ FPDEV+ YR+IRA+ AAE+KR+AQ+Q
Sbjct: 121 NCIAKNQVTKGKSDAFKGLRKHLLEELEQAFPDEVDRYRDIRASYAAEAKRLAQTQ 172

The following BLAST results are available for this feature:

BLAST of Csor.00g189700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HPA7	1.2e-60	73.74	Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana ...	[more]
Q9FHZ2	1.5e-55	69.89	Mediator of RNA polymerase II transcription subunit 10a OS=Arabidopsis thaliana ...	[more]
Q16G71	4.1e-16	34.15	Mediator of RNA polymerase II transcription subunit 10 OS=Aedes aegypti OX=7159 ...	[more]
Q7Q5R5	9.1e-16	34.15	Mediator of RNA polymerase II transcription subunit 10 OS=Anopheles gambiae OX=7...	[more]
Q9CXU0	2.9e-14	36.75	Mediator of RNA polymerase II transcription subunit 10 OS=Mus musculus OX=10090 ...	[more]

BLAST of Csor.00g189700 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577769.1	4.69e-216	100.00	Mediator of RNA polymerase II transcription subunit 10b, partial [Cucurbita argy...	[more]
KAG7015809.1	2.06e-118	79.67	Mediator of RNA polymerase II transcription subunit 10b [Cucurbita argyrosperma ...	[more]
XP_022923485.1	2.54e-108	100.00	mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata...	[more]
XP_008448559.1	1.96e-105	97.14	PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [C...	[more]
XP_038876576.1	2.78e-105	97.14	mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida]...	[more]

BLAST of Csor.00g189700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLJ2	1.23e-108	100.00	Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita maxima OX=36...	[more]
A0A6J1E6X8	1.23e-108	100.00	Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita moschata OX=...	[more]
A0A1S3BJY3	9.49e-106	97.14	Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis melo OX=3656 G...	[more]
A0A6J1CVZ0	7.74e-105	95.43	Mediator of RNA polymerase II transcription subunit 10 OS=Momordica charantia OX...	[more]
A0A0A0L3Q2	4.35e-104	96.57	Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis sativus OX=365...	[more]

BLAST of Csor.00g189700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26665.1	1.3e-62	74.30	Mediator complex, subunit Med10	[more]
AT1G26665.2	8.6e-62	73.74	Mediator complex, subunit Med10	[more]
AT5G41910.1	1.1e-56	69.89	Mediator complex, subunit Med10	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019145	Mediator complex, subunit Med10	PFAM	PF09748	Med10	coord: 45..158 e-value: 2.3E-28 score: 98.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..319
None	No IPR available	PANTHER	PTHR13345	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10	coord: 1..176
None	No IPR available	PANTHER	PTHR13345:SF9	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10A-RELATED	coord: 1..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g189700.m01	Csor.00g189700.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003712	transcription coregulator activity