Csor.00g189530 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g189530
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr16: 8998352 .. 9000268 (+)
RNA-Seq ExpressionCsor.00g189530
SyntenyCsor.00g189530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTGGTTGGCTACAGGCGGCCATTCTAGAACGGAGAAAAATTCGTCCAAGTTCGTGTTTGTGGCGACCACACGTCTGAACTTGCTCCTTCTCTCTTCTTTGCTGCGATTTTCCGGCGTCAATCACTCGAAGAGATTCACTTTCTTCGGTATTTTATCTCATTTCGAACGCTTCGGGTTTTTCTTTTCTTGATTTTTCCATGTTTTTCGATGTCAATTTTGTGGTTTCTTCATTTTTCAAGCTGAAGGAAAATCCAATTTGTAGGGCTTTGTATGATCAGATATTAGTATTCCGAATTCTCCTGCTTATGAAATTTCAGTGTGTGTTTTTATGTCATCGCCATGATTGTCTTGAAATTTTGTACGAATTACTCTCTCGCTGCGGGAGGTTGATGTGATTGATTTTACGGCTGGAGAAACTCTTCCGGCTTTATTCTTGTTCGTGCCGACGGTACATGCTATTGAGTTGTTTAGATCTTGTTTTCTGTGGTTGGTTTGTTATTTGAAAGGTTTAATTGGAGCATAAGGTTTTCAAAATCTTCTATCATCCGGGAGTTTGTTTGCGCGGAGTTCCTTGTTTGGTTGTAAGCTATAGATTATTTATTGGCCACCATTTATGGTTGTCAATTTCTCTTTGACTTTGTACTTTTTTTCTGGACTCTGGTTGTCGAAGATTGACGTGACAGAGAATCGTCTTTATGGTGTGTTTTTCTGTTTGAACGAGTTTGATTCAGCACTGGTCTCGTGAGGGTTGGTGTACCTCGAAATTTAAAACCATGTAATTCTAATATCTAATGTATGAGGAAGAACAAACTACCTTTCGTTGGCCTTTTGGAATTGGGGCGTGTGAAATAAGTAGTGGCTTGGGGAAGGGGAAATAGGATCAAACTACAAAGTAAGGGGAAGTTTAGTATGTATGTGTGAGTCCCACATCGATTGGGGAGGGAATGAAACATTCTTTGTAAGGGTGTGGAAACCTCTCCCTAGCAAACAACATTTTCAAAACCTTGAGGGGAAGCTCGAAAGGGAAAGCCCAAAGAGGATAATATCTGCTAGGGGTGGACTTGGGCTGTTATAAATGGTATTAGAGCCTTGCACATCGCCCACTTGGGTTGTTATAAATGGTATTAGAGCTAGACATCGGGTGATGTGCCAGCGAGGAGGCTGAGCCCTGAAGGGGGGGTGGACACAAGGTGGTGTGCCAGCAAGGACGCTGTCCCCTAGGGGGGAATGGATTGGGGGGTCTCACATCAATTGAAGAAGGGAACGAGTGCCTGCAGGCCCTTAAGGGGGGGTGGGGGTGGACACAAGGTGGTGTGCTAGCAAGGACGTTGACCCCCTAAGGGGGATGGATTGGGGGGTATCACATCGATTGAAGAAGGGAACGAGTGAAGGGGGAGGGTGAATTGTGAAATCCCACACCGATTGGGGAGGGAGAACGAAACATTTTTTATAAGGGTGTGAAAACCTCTCCCTAGCAGATGCATTTTAAAAACCTTGAGGGAAAGCCCAAGTAGTGGGCTTGAGCTTAAAAACCTTGAGGGGGAGCTCAAAGAAGACAATATCTACTAGTAGTGGCCTTGGGCCATTACCGTACGAGACGAATTTCGTGTGAGATTAGTCAGGGTTCATGTAAGATAGCTCGTATACACACAGTATAAAAACAAAATGAAATTGAAGAGAAGCTATGATATGAAATGAACTGATATGTTTGCAGTGTTATCTGTTTATAAAGTTCCCTTGTGCTTTGCTTTTACCCTTCGTGTCTTAAAACATGGAAGTTGATAATTATTTAACCTAGAGGGAATCTTGACCTTTCTACTTTCTATCCCCTTCTGTTTCTTATCTCCGTATACTTGCAGGAAAACTCTTACTGAGAAGCAGTGATGGACTTTATATTCAGAGGAATGAATGA

mRNA sequence

ATGGAGTGGTTGGCTACAGGCGGCCATTCTAGAACGGAGAAAAATTCGTCCAAGTTCGTGTTTGTGGCGACCACACGTCTGAACTTGCTCCTTCTCTCTTCTTTGCTGCGATTTTCCGGCGTCAATCACTCGAAGAGATTCACTTTCTTCGGAAAACTCTTACTGAGAAGCAGTGATGGACTTTATATTCAGAGGAATGAATGA

Coding sequence (CDS)

ATGGAGTGGTTGGCTACAGGCGGCCATTCTAGAACGGAGAAAAATTCGTCCAAGTTCGTGTTTGTGGCGACCACACGTCTGAACTTGCTCCTTCTCTCTTCTTTGCTGCGATTTTCCGGCGTCAATCACTCGAAGAGATTCACTTTCTTCGGAAAACTCTTACTGAGAAGCAGTGATGGACTTTATATTCAGAGGAATGAATGA

Protein sequence

MEWLATGGHSRTEKNSSKFVFVATTRLNLLLLSSLLRFSGVNHSKRFTFFGKLLLRSSDGLYIQRNE
Homology
BLAST of Csor.00g189530 vs. NCBI nr
Match: KAG6577752.1 (hypothetical protein SDJN03_25326, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132 bits (333), Expect = 6.90e-39
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query: 1  MEWLATGGHSRTEKNSSKFVFVATTRLNLLLLSSLLRFSGVNHSKRFTFFGKLLLRSSDG 60
          MEWLATGGHSRTEKNSSKFVFVATTRLNLLLLSSLLRFSGVNHSKRFTFFGKLLLRSSDG
Sbjct: 1  MEWLATGGHSRTEKNSSKFVFVATTRLNLLLLSSLLRFSGVNHSKRFTFFGKLLLRSSDG 60

Query: 61 LYIQRNE 67
          LYIQRNE
Sbjct: 61 LYIQRNE 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6577752.16.90e-39100.00hypothetical protein SDJN03_25326, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g189530.m01Csor.00g189530.m01mRNA