Csor.00g188610 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGCTGGAAGTGGGAATCGCTTAATCTCCATTCAACCGGATGAGCTCAAGTTTCAGAGTATGTAATTTTGTTTCCATGTTTATCGTATCTTGTTCTTGAATTTGCTCTGGTTTTTCGTTTAATTCTTGCATTGATTTTGCTCATTCTTGTCATGGAAGTAGAAAAACGAAATTATTAGGTGAGTTTTGTGATAGTTCTTGAGGATTATAGTATGGATTTATGTGGAGAAAGGAAGAAATGAGCTGAGAAACTCCCAATTCTGTGATGATTTCATACGAGGAAAGATTTTTGGAACCTACCTAATTTCCTTGCATTGAGTGTTAAGATAATTATATGAGGGAAAGAGACTCCTAGCTGCAAGGTGTTTTCATGGAGGTGGAGGCCTTTTCTATGAGAGGCATAGGCCTATTGTGAACGAAAAATTGGTCTAAGCCCTGATGCAAACGTTTGTATCCATAAGGATTTTAATCGATTATGGGTAGCATTATCATATTTGTGATGAAAATTTGGGAGATTGTTGATTGAATCTATATTAAGATTGGATGCAATTATCGTTTATCTGGCTGTCCACCTAAATCTGAGGCTGTTATAGATGTAATAACACAACTTCATAAGAAAATATCTTGAGAAATCTATGGAGATCGGTGTTTTACGACCTACCATAAATTTCAGGTTGGCCTAAGTACTCATATTGGAAACTACGATAAAGGATTACTCTATCAACCATCATCTACTTTAGAGATCATAAACTTTTTGTTTCTCATTTTAACCCCAAAGGCCTTTCAGTATTATCCATGGCTTCCCTCAATCCATGGAATCTATTAAGAAACAGAATGTTAATTCAATGGTTTTGTTTGTTCTTGAGTAAAGTTTTGTACATATTCTTATATGTTGACCTCTCATTTGCGTTTTGAACTTATGAATGGGGCCTATATCATCAGTTGAGTTGGAAAAGCAGAGTTTTTGTGATCTTAAAGTTGCAAACAACACAGAACATCATGTTGCCTTTAAGGTAATAGTTTTGAGTATTTTAAGAATGCATATATATTTGACATTGAATATCTATTTTGTAAAGAATTTTGCTAACTTCAAATTTATTTCTTTATAATAGGTCAAGACGACCTCACCGAAGAAGTACTTTGTGCGTCCCAACACTGGTGTCGTACAGCCTTGGGACTCTTGCATCATAAGAGGTCGTAATCGTTATCTAAGCATTTGATGTTCATGCTTTGTTCGCCCTTATTTGTTCATGTTTTGAGCTTCAAAGAAAGATAAATGGGTTTTTCATACCAAATTTTTTGTTCGTGTTTCTTGCATCATAAGAGGTCATAATCGTTATCCAAGCATTTTATGTTTATGCTTTGTTCTCCCTTATTTGTTCGTGTTTCAAGCTTCAAAGAAAGATTAGCGGGTTTTTTATACCACATTATCTGTTCGTGTTTCTTGCATCATAATAGGTCGTGATCGTTATCTAAGCATTTATGTTTATGCTTTGTTCTCCCTTATTTGTTCGTGTTTCAAGCTTCAAAGAAAGATAAGCTGGTTTTTTATACCACATTATCGGTTCGTGTTTCTTGCATCATAATAGGTCGTAATCGTTACCTAAGCATTTTATGTTTATGCTTTGTTCTCCCTTATTTGTTCATGCTTCAAGCTTCAAAGAAATATAAGCGGGTTTTTTATACCACATTATTTGTTCGTGTTTCTTGCATCATAATAGGTTGTAATCGTTATCTAAGCATTTTATGTTTATGCTTTTTTCTACCTTATTTGTTCGTGTTTCAAGCTTCAAAGAAAGATCAGCGGGTTTTTTATACCACATTATTTGTTCGTGTTCCTTTGCACAAGCATATGTTAAGTGCTACTGGCAGCTAATCTAAATATTATATGCATCGAAGTTTATGTCGCTTGATTCGTCTCGGTTTATCTTTTTCTGTTAAACTAAAATCGAGTTGCTGCTGGATCCACAGTGACTCTCCAAGCTCAGCGAGAGTATCCTGCAGATATGCAATGCAGAGATAAGTTCCTCTTACAAAGTACAATAGTCCCACCAAATACTGATGTAGATGAACTTCCAGCTGATGCTGTAAGAATTTTGACTTGTGGCTTAGTATGAATGAACATACCATTTCATTCTAAAAAGCTCCATTCGAACCTTTATTTTCTTGTTTCCAGTTTAACAAGGACAGTGGACGGGCGATCGAGGAATGCAAGCTTAAGGTTATCTATATTTCTTCAACATCATCTCTGGGGAATTCAGAAGATGAAAAGAACTCATCTCAAAGCTCCACTGTGAGTGCTGAAATTCTCCTTATTGTTCCCTGCAATTTGAAATATCAAATTTGAACTTTTGTTGTGAGATCCCACCTCGGTTGGGGAGGAGAACGAAACCGTCTTTATAAGAGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAACCTTTAAGGGAAGTCCAAGTGGTAAGGTAAAGCCCAAGAGGGAAAGCTCAAATAGAACAATATCTGCTGGCGGTAGGCTGTGGGCTGACTGTTACATTTGTTCTGCACATTCATAAGCTGTTTGCTCTACTGATTCTTTGTGGTTAAGTGGAGGAGTCATAAAAAGTTTAAGATACGCTTAAGGCCTCATTAGACTACATAGACCTTTATTGCTCGTAAATTTTAAACACGCTGATTGTTGTTCTGTTTCCCTATCTCATATACCATCGGCGCTAACACGAGCAGGCTTTACAACGTCTGAAGGAAGATAGAGACATGGCTATAAGGCAAACCCATCAATTACAACAGGAACTGGTGAGTTACATCTCTCTCTCTATTATACTTCTTTGCTGGCTGTAAGACTTCTGTAATACCCAAGAGACTTGTTCAATGCATAGTTCATAATAACAATGAGTTGAACTTGAGCAAGATTGGGTCCATAGCATGATCACTGGTTAGTTTTTAAGACCTAACGAATAAGTTATCGTCTTGAGAGAAACATAGGACCTACCAATGGACCAAACAATGCTCGGATCCCTCCCCGTTTCTCTAAATAATCTATCGTTCTCTCTCCCTAACGACCACACAACAAACACACCCCTTCATACCTCAAGAATCTCCCCTTCTCCCTAAACAATAGACGGAGAAGGAACAAACACACTTGTTCTTACCTCAAGAGCCTCCCCTTCTCCCTAAATGATAGATGGAGAAGGAAACTGTGAGATCTCACATCGATCGGAGAGGAGAACGAAACATTCTTTAGAAGGGTGTGGAACCCTCTCCTTAGCAGACACGTTTTAAAAACCTTGAGGGGAAGTCCGAAAGGGAAAGCCCAAAGAGGACAACATTTGCTAGCCGTAAGCAAAAAAGTAACTCCAAACAAATCGCACATGGATTCGCCCATAAGCTAGAACATGGATGACATGCCATTTCATATTACCTTGAGGAGAACTGACATCATTCATTTGATATTCATGTTTATGTACAATATTTATTTGGTTCGTAGTTCCAATGGTTACCTATGCAATATGGATCTGTTAGTTTTTTGTTTCTTCTTCATATAATTACTAGATTTTCCCACAAAGCTAGAACATGGAGGGGTTTATTAAAGTCATTATGTTCTTAGCATTGACCTTTTAGTAGCTAATCATTACCCCCTCCGACAACTCAATACTTTACACAAATCATTACTCTCAAATAGGACATGATGAAGAGAAGAAAATATCGAAAAGGCGATCCTGGGTTCTCGTTTACTTTCGCAATCTTCGTGGGCATCGTCGGGATCATTGCAGGGTTCCTCTTGAATTTCACATTATCTTCACCATCTACAGAATGA ATGAGTGCTGGAAGTGGGAATCGCTTAATCTCCATTCAACCGGATGAGCTCAAGTTTCAGATTGAGTTGGAAAAGCAGAGTTTTTGTGATCTTAAAGTTGCAAACAACACAGAACATCATGTTGCCTTTAAGGTCAAGACGACCTCACCGAAGAAGTACTTTGTGCGTCCCAACACTGGTGTCGTACAGCCTTGGGACTCTTGCATCATAAGAGTGACTCTCCAAGCTCAGCGAGAGTATCCTGCAGATATGCAATGCAGAGATAAGTTCCTCTTACAAAGTACAATAGTCCCACCAAATACTGATGTAGATGAACTTCCAGCTGATGCTTTTAACAAGGACAGTGGACGGGCGATCGAGGAATGCAAGCTTAAGGTTATCTATATTTCTTCAACATCATCTCTGGGGAATTCAGAAGATGAAAAGAACTCATCTCAAAGCTCCACTGCTTTACAACGTCTGAAGGAAGATAGAGACATGGCTATAAGGCAAACCCATCAATTACAACAGGAACTGGACATGATGAAGAGAAGAAAATATCGAAAAGGCGATCCTGGGTTCTCGTTTACTTTCGCAATCTTCGTGGGCATCGTCGGGATCATTGCAGGGTTCCTCTTGAATTTCACATTATCTTCACCATCTACAGAATGA ATGAGTGCTGGAAGTGGGAATCGCTTAATCTCCATTCAACCGGATGAGCTCAAGTTTCAGATTGAGTTGGAAAAGCAGAGTTTTTGTGATCTTAAAGTTGCAAACAACACAGAACATCATGTTGCCTTTAAGGTCAAGACGACCTCACCGAAGAAGTACTTTGTGCGTCCCAACACTGGTGTCGTACAGCCTTGGGACTCTTGCATCATAAGAGTGACTCTCCAAGCTCAGCGAGAGTATCCTGCAGATATGCAATGCAGAGATAAGTTCCTCTTACAAAGTACAATAGTCCCACCAAATACTGATGTAGATGAACTTCCAGCTGATGCTTTTAACAAGGACAGTGGACGGGCGATCGAGGAATGCAAGCTTAAGGTTATCTATATTTCTTCAACATCATCTCTGGGGAATTCAGAAGATGAAAAGAACTCATCTCAAAGCTCCACTGCTTTACAACGTCTGAAGGAAGATAGAGACATGGCTATAAGGCAAACCCATCAATTACAACAGGAACTGGACATGATGAAGAGAAGAAAATATCGAAAAGGCGATCCTGGGTTCTCGTTTACTTTCGCAATCTTCGTGGGCATCGTCGGGATCATTGCAGGGTTCCTCTTGAATTTCACATTATCTTCACCATCTACAGAATGA MSAGSGNRLISIQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAQREYPADMQCRDKFLLQSTIVPPNTDVDELPADAFNKDSGRAIEECKLKVIYISSTSSLGNSEDEKNSSQSSTALQRLKEDRDMAIRQTHQLQQELDMMKRRKYRKGDPGFSFTFAIFVGIVGIIAGFLLNFTLSSPSTE Homology
BLAST of Csor.00g188610 vs. ExPASy Swiss-Prot
Match: Q9LVU1 (Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 2.9e-74 Identity = 141/220 (64.09%), Postives = 174/220 (79.09%), Query Frame = 0
BLAST of Csor.00g188610 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 3.2e-41 Identity = 90/237 (37.97%), Postives = 140/237 (59.07%), Query Frame = 0
BLAST of Csor.00g188610 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 7.2e-41 Identity = 95/232 (40.95%), Postives = 140/232 (60.34%), Query Frame = 0
BLAST of Csor.00g188610 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 4.7e-40 Identity = 87/239 (36.40%), Postives = 141/239 (59.00%), Query Frame = 0
BLAST of Csor.00g188610 vs. ExPASy Swiss-Prot
Match: B9DHD7 (Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 4.9e-29 Identity = 63/126 (50.00%), Postives = 86/126 (68.25%), Query Frame = 0
BLAST of Csor.00g188610 vs. NCBI nr
Match: XP_022923370.1 (vesicle-associated protein 2-1 [Cucurbita moschata] >XP_022965179.1 vesicle-associated protein 2-1-like [Cucurbita maxima] >KAG6577660.1 Vesicle-associated protein 2-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 423 bits (1088), Expect = 3.13e-149 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Csor.00g188610 vs. NCBI nr
Match: XP_023551809.1 (vesicle-associated protein 2-1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 419 bits (1078), Expect = 1.05e-147 Identity = 214/216 (99.07%), Postives = 215/216 (99.54%), Query Frame = 0
BLAST of Csor.00g188610 vs. NCBI nr
Match: XP_038905973.1 (vesicle-associated protein 2-1 [Benincasa hispida]) HSP 1 Score: 403 bits (1036), Expect = 2.65e-141 Identity = 202/216 (93.52%), Postives = 210/216 (97.22%), Query Frame = 0
BLAST of Csor.00g188610 vs. NCBI nr
Match: XP_008448784.1 (PREDICTED: vesicle-associated protein 2-1 [Cucumis melo] >KAA0041052.1 vesicle-associated protein 2-1 [Cucumis melo var. makuwa] >TYK12062.1 vesicle-associated protein 2-1 [Cucumis melo var. makuwa]) HSP 1 Score: 399 bits (1026), Expect = 8.87e-140 Identity = 200/216 (92.59%), Postives = 209/216 (96.76%), Query Frame = 0
BLAST of Csor.00g188610 vs. NCBI nr
Match: XP_004147234.1 (vesicle-associated protein 2-1 [Cucumis sativus] >KGN55827.1 hypothetical protein Csa_011407 [Cucumis sativus]) HSP 1 Score: 396 bits (1018), Expect = 1.47e-138 Identity = 197/216 (91.20%), Postives = 209/216 (96.76%), Query Frame = 0
BLAST of Csor.00g188610 vs. ExPASy TrEMBL
Match: A0A6J1HQA2 (vesicle-associated protein 2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111465113 PE=4 SV=1) HSP 1 Score: 423 bits (1088), Expect = 1.52e-149 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Csor.00g188610 vs. ExPASy TrEMBL
Match: A0A6J1EBL8 (vesicle-associated protein 2-1 OS=Cucurbita moschata OX=3662 GN=LOC111431088 PE=4 SV=1) HSP 1 Score: 423 bits (1088), Expect = 1.52e-149 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Csor.00g188610 vs. ExPASy TrEMBL
Match: A0A5A7TC60 (Vesicle-associated protein 2-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00770 PE=4 SV=1) HSP 1 Score: 399 bits (1026), Expect = 4.29e-140 Identity = 200/216 (92.59%), Postives = 209/216 (96.76%), Query Frame = 0
BLAST of Csor.00g188610 vs. ExPASy TrEMBL
Match: A0A1S3BLE3 (vesicle-associated protein 2-1 OS=Cucumis melo OX=3656 GN=LOC103490849 PE=4 SV=1) HSP 1 Score: 399 bits (1026), Expect = 4.29e-140 Identity = 200/216 (92.59%), Postives = 209/216 (96.76%), Query Frame = 0
BLAST of Csor.00g188610 vs. ExPASy TrEMBL
Match: A0A0A0L5E3 (MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G017210 PE=4 SV=1) HSP 1 Score: 396 bits (1018), Expect = 7.12e-139 Identity = 197/216 (91.20%), Postives = 209/216 (96.76%), Query Frame = 0
BLAST of Csor.00g188610 vs. TAIR 10
Match: AT5G47180.1 (Plant VAMP (vesicle-associated membrane protein) family protein ) HSP 1 Score: 279.6 bits (714), Expect = 2.1e-75 Identity = 141/220 (64.09%), Postives = 174/220 (79.09%), Query Frame = 0
BLAST of Csor.00g188610 vs. TAIR 10
Match: AT5G47180.2 (Plant VAMP (vesicle-associated membrane protein) family protein ) HSP 1 Score: 279.6 bits (714), Expect = 2.1e-75 Identity = 141/220 (64.09%), Postives = 174/220 (79.09%), Query Frame = 0
BLAST of Csor.00g188610 vs. TAIR 10
Match: AT2G45140.1 (plant VAP homolog 12 ) HSP 1 Score: 169.9 bits (429), Expect = 2.3e-42 Identity = 90/237 (37.97%), Postives = 140/237 (59.07%), Query Frame = 0
BLAST of Csor.00g188610 vs. TAIR 10
Match: AT4G00170.1 (Plant VAMP (vesicle-associated membrane protein) family protein ) HSP 1 Score: 168.7 bits (426), Expect = 5.1e-42 Identity = 95/232 (40.95%), Postives = 140/232 (60.34%), Query Frame = 0
BLAST of Csor.00g188610 vs. TAIR 10
Match: AT3G60600.1 (vesicle associated protein ) HSP 1 Score: 166.0 bits (419), Expect = 3.3e-41 Identity = 87/239 (36.40%), Postives = 141/239 (59.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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