Csor.00g188060 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g188060
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein cornichon homolog 1-like isoform X1
Location	Csor_Chr07: 7703705 .. 7706685 (+)
RNA-Seq Expression	Csor.00g188060
Synteny	Csor.00g188060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACTTGGAAATGTGGTTGAAACTGGAAGCAATCACGATGGAACTACTGAAGCTTCATCGCAGTATGTAGCTTTAGACTCTATAGAGTTCAAATTCTCAAGAACACTGAACTTGCGAGATCGCCTTACCATCAACAATCAAGCTTTGAGTTCTGGAATTTCTGAACTGACGCTGCGCGGTTGTAGAAATGGCGTGGAGTCTGATCTTTTGGTTCGTCTCTTTCTGTATCAACATCGCACTTCTCGTCCTCAACTTTTACCAGGTACACCCTTTCTAATCTCTCATAAACCCTAGTTTTCGCGATCAAGTTACAGATTCTTTTGCGAGAAAGTTTGAATGCGTCTACTGAAACGTAGCCCTAATGTTGTTGTTGTGTTTGTCTTGTTGTAATCTTGTTGTTGCTTATTCAGTAAGCAGTGGAGGTCTGATGCATATCTCAGATTCAGATTCGGTTTTCTTGAAGAGAGAATTTCGACTTCAATTTTATTTACGTTTATATGTGACCTAGACCTAGATTTTGATTGATGGAACCTTTACACTTTCGTTGCGCCTACTTTTGAAATAGATTCAATACCTACTTACTGTTCCACCGCTCTCTTAGTTTCATAATTTTACGGTGATGAGTTTGATATCTTGATCAATCGTGCACTGGTAGCCGAAGTGAACGTATTCACAAAATGACATATCTACCTGTGAAATGACCGGCCACTTCCATGGAATGGATTGATCATTTCCTTTTGCATCTGAGTCAACGATGTACTCTTACCTTGTTTTGTAGTCTCCAGAGAAGTGGCTGTATATGTAACTTGTTGAGATAAAAGATTGTAAATGTATTTCAACCATGAAACGGGCTTCAATTATTATAGTTGATTATACTCTAATAACTGGTTCTTGATGCGGATGGAAGTAAAAGTGATCCCAATTCCTGCGGGTTATGTCTGGGACATCAATAGATTGTTGGCTTTACTCCCATTTCGTTTAATATGATGTACAGTGGCAGGAGGAGAGAATTTATTGCTCTTATTTTCATTTGAACCATGACGATTTGTCCTCTCTATTGCTTGTATTCTTATAGACTTGATGAATGTTTAGATTTTACACTTGTAGATGAACATCACTAGCCATTGCAAAGAGTAATATTTATTGTCTAGTTACATCTGTGCTTTTAAGTTGGAAGCATCTAATGGTTGTGGTTGATCTTTTTTTGTAGCTCTTGGTATTAACGGATTTGGAAGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAACAAACTTGTTGTTCCAGAGTTTTTGGTGCAAGGACTGTTTTGCTCTCTTTTCCTCTTCACAGGCCACTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGTTATCACATAAATTTGTAAGTGTTTCTTGACTCTGAAATAAGGCCTGGTATATATTTTCTTTTACTGTGTGCTATGGATGAGACCTATTGGTGGCGTTCTTTGTTGATTTTCCCCTTCTACTGTCTGGAAGTGTTATGTATGAGGCTTATGATGTCCCTTACTTGTAAAATGAATCTAGCTTGCACTCATATTATATATACTTTATTCTTTTGTTATGGAAAAAAGCATTATGCATTCTTTTTACTTTCTTAATACGCCTTGTTCTATTATCAAACACCATTCTTTTAGATGAATGTATATAGTGAAAACTTCTTGGTACGGTTAGAAACATCGAAGATTCTCACTCTGAATGTATATAGTGAAAACTTCTTGGACGATGTTAATGGTAAACCGATTAACCTGGTGCCAATTATTGCTTTCGTCATTTTTTCTGAACATTCTTATTCCATGTAGCTATCCCAGTACAAGACTCAAATTTAATTCCATTACACAGGTCCTCCATCAGCGGAAGTATGCCAACTTATTGTTTGAAACTTTTATCCCACATAAGTCTTTAATAAATTTTTGGTGATCGATGACCATCTACTACTGGTCATTTTTTAGAGTAAAACTAAAACTTAGTAATGTAGGATGGTTAACAGGATAAAGAAAAAACAAGGAAAAAAGAAAATGAATTATGTTCCACTACTTGGACTGAGTTTCTTTCAAGTATTTCTCCATGTTTTGTGTTTATGATGAATTATCCTGTTACAATGCCCCAGGTTCTTGAAGAGGGAGCATCTTATTGATGTTACTGAGGTGTTCAAAACTCTAAAACGTGAGAAGTATTTTCGTTTTGCCAAGCTTATCTTCTACTTGCTTCTGTTCCTCGTAGTAATCTTCAGGTTAGTCTGAATTTTTCCTTGCGTCATTCTGCTTTTCTTCTTAACTATTTGGAAGGTTGGATATTTCTGATTGAAGTTTTCCTTGCTGTTTTCTGTATAGAATAATAATGGTAGCGGGAATGAAATCTGTTTTTGACTCTGCACCTGAGGATATAGACATTCTCTCCACTGTTCTCGAATTCTAGAGTATTTATTTAACCAACTAGCTTAAAGTCGAATCCATCCTTTGTTTTGAAATACGTATATGATTACAATGAAAATAGTCAACTTATTTATTCATTGCAAAGTTCTTAAAGATAATGATGTTACACTGACTTGGGATTGTTTTGTTGGTTTTGGAAGCTATATACCATTACTCTCTGTTCTCTTGACGCCTTTTAGTACCTTGTTAGTAATGCATTATTGCAAGTTTTTGGATTTTGCTCTGTTTGATCCAAATGTTGTCTCTTTCTAACCTTTTCTAGTCCCAATATTTTCTATAAATTAACTTAGAATGTCCAATACATATTTTATGTTAAAAAATGTAGCTTTGTTTAGTTTTATGGTCGACTCCTATGCTTCTTGAGTGAGATCCTGGTACATATGCACTTGCATACACATATTTTCGCCTCTCTTACTGGCATTCTTACATGTATTGAATTAACATGCAATGCAGGCTTACCTTGTCTGCTTTCAACGCATTATCTGATGAAGGCGACGTCCTACATTTATTTTGA

mRNA sequence

ATGAAACTTGGAAATGTGGTTGAAACTGGAAGCAATCACGATGGAACTACTGAAGCTTCATCGCAGTATGTAGCTTTAGACTCTATAGAGTTCAAATTCTCAAGAACACTGAACTTGCGAGATCGCCTTACCATCAACAATCAAGCTTTGAGTTCTGGAATTTCTGAACTGACGCTGCGCGGTTGTAGAAATGGCGTGGAGTCTGATCTTTTGGTTCGTCTCTTTCTGTATCAACATCGCACTTCTCGTCCTCAACTTTTACCAGCTCTTGAGTTTTTGGTGCAAGGACTGTTTTGCTCTCTTTTCCTCTTCACAGGCCACTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGTTATCACATAAATTTGTTCTTGAAGAGGGAGCATCTTATTGATGTTACTGAGGTGTTCAAAACTCTAAAACGTGAGAAGTATTTTCGTTTTGCCAAGCTTATCTTCTACTTGCTTCTGTTCCTCGTAGTAATCTTCAGGCTTACCTTGTCTGCTTTCAACGCATTATCTGATGAAGGCGACGTCCTACATTTATTTTGA

Coding sequence (CDS)

ATGAAACTTGGAAATGTGGTTGAAACTGGAAGCAATCACGATGGAACTACTGAAGCTTCATCGCAGTATGTAGCTTTAGACTCTATAGAGTTCAAATTCTCAAGAACACTGAACTTGCGAGATCGCCTTACCATCAACAATCAAGCTTTGAGTTCTGGAATTTCTGAACTGACGCTGCGCGGTTGTAGAAATGGCGTGGAGTCTGATCTTTTGGTTCGTCTCTTTCTGTATCAACATCGCACTTCTCGTCCTCAACTTTTACCAGCTCTTGAGTTTTTGGTGCAAGGACTGTTTTGCTCTCTTTTCCTCTTCACAGGCCACTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGTTATCACATAAATTTGTTCTTGAAGAGGGAGCATCTTATTGATGTTACTGAGGTGTTCAAAACTCTAAAACGTGAGAAGTATTTTCGTTTTGCCAAGCTTATCTTCTACTTGCTTCTGTTCCTCGTAGTAATCTTCAGGCTTACCTTGTCTGCTTTCAACGCATTATCTGATGAAGGCGACGTCCTACATTTATTTTGA

Protein sequence

MKLGNVVETGSNHDGTTEASSQYVALDSIEFKFSRTLNLRDRLTINNQALSSGISELTLRGCRNGVESDLLVRLFLYQHRTSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDVLHLF

Homology

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BLAST of Csor.00g188060 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.4e-21
Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = 0


Query: 62  CRNGVESDLLVRLFLYQHRTSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYH 121
           C   +E+D L         ++R   L   EF++QG  C LFL T HW  FL+ VPV+ YH
Sbjct: 28  CLTDLEADYLNPF----ETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYH 87

Query: 122 INLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDVL 181
             L+ +R +LIDVTEVF+ +  EK  R+ KL FY+ LF++V+FRLTLSA  + +++ D+L
Sbjct: 88  AMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIMVVFRLTLSAVYSFTEDDDLL 146

Query: 182 HLF 185
           HLF
Sbjct: 148 HLF 146

[Close]

BLAST of Csor.00g188060 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 3.5e-12
Identity = 38/86 (44.19%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 91  EFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFA 150
           EF+VQG+ C  +L TGHWFM L+ +P   Y+ +L+ KR+HL+DVTE+F  L  EK  R  
Sbjct: 44  EFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLF 103

Query: 151 KLIFYLLLFLVVIFRLTLSAFNALSD 177
           KL + +L   + IF +  SA +   D
Sbjct: 104 KLAYIVLNLFLTIFWMIYSALDDYED 129

[Close]

BLAST of Csor.00g188060 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.5e-12
Identity = 38/86 (44.19%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 91  EFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFA 150
           EF+VQG+ C  +L TGHWFM L+ +P   Y+ +L+ KR+HL+DVTE+F  L  EK  R  
Sbjct: 52  EFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLF 111

Query: 151 KLIFYLLLFLVVIFRLTLSAFNALSD 177
           KL + +L   + IF +  SA +   D
Sbjct: 112 KLAYIVLNLFLTIFWMIYSALDDYED 137

[Close]

BLAST of Csor.00g188060 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-10
Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 82  SRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTL 141
           SR   +   E ++QG  C  +L TGHWFM L+ VP   Y+ +L+ +++HLIDVTE+F  L
Sbjct: 43  SRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLL 102

Query: 142 KREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSD 177
             EK  R  KL + +L   + IF L  S  +   D
Sbjct: 103 DWEKKKRLFKLAYIILTLFLTIFWLIYSTLDDYED 137

[Close]

BLAST of Csor.00g188060 vs. ExPASy Swiss-Prot
Match: P38312 (ER-derived vesicles protein ERV15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ERV15 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-09
Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 83  RPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLK 142
           R   L   E ++Q    +LFLF G+WF+FL+ VPV  Y+ +   K+ HL+D T++F+ L 
Sbjct: 46  RVNRLSVPEAILQAFISALFLFNGYWFVFLLNVPVLAYNASKVYKKTHLLDATDIFRKLG 105

Query: 143 REKYFRFAKLIFYLLLFLVVIFRL 167
           R K   F KL FYLL+F    +R+
Sbjct: 106 RCKIECFLKLGFYLLIFFFYFYRM 129

[Close]

BLAST of Csor.00g188060 vs. NCBI nr
Match: KAG6595652.1 (Protein cornichon-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 358 bits (919), Expect = 1.59e-124
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MKLGNVVETGSNHDGTTEASSQYVALDSIEFKFSRTLNLRDRLTINNQALSSGISELTLR 60
           MKLGNVVETGSNHDGTTEASSQYVALDSIEFKFSRTLNLRDRLTINNQALSSGISELTLR
Sbjct: 1   MKLGNVVETGSNHDGTTEASSQYVALDSIEFKFSRTLNLRDRLTINNQALSSGISELTLR 60

Query: 61  GCRNGVESDLLVRLFLYQHRTSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCY 120
           GCRNGVESDLLVRLFLYQHRTSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCY
Sbjct: 61  GCRNGVESDLLVRLFLYQHRTSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCY 120

Query: 121 HINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDV 180
           HINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDV
Sbjct: 121 HINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDV 180

Query: 181 LHLF 184
           LHLF
Sbjct: 181 LHLF 184

[Close]

BLAST of Csor.00g188060 vs. NCBI nr
Match: KAG7027612.1 (Protein cornichon-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 187 bits (474), Expect = 2.61e-57
Identity = 97/104 (93.27%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 81  TSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT 140
           +SR   L   EFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT
Sbjct: 43  SSRINKLVVPEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT 102

Query: 141 LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDVLHLF 184
           LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDVLHLF
Sbjct: 103 LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDVLHLF 146

[Close]

BLAST of Csor.00g188060 vs. NCBI nr
Match: XP_022925062.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita moschata] >XP_022966479.1 protein cornichon homolog 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 184 bits (467), Expect = 3.02e-56
Identity = 96/104 (92.31%), Postives = 97/104 (93.27%), Query Frame = 0


Query: 81  TSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT 140
           +SR   L   EFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT
Sbjct: 43  SSRINKLVVPEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT 102

Query: 141 LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDVLHLF 184
           LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDE DVLHLF
Sbjct: 103 LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEDDVLHLF 146

[Close]

BLAST of Csor.00g188060 vs. NCBI nr
Match: XP_023518963.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184 bits (467), Expect = 3.02e-56
Identity = 96/104 (92.31%), Postives = 97/104 (93.27%), Query Frame = 0


Query: 81  TSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT 140
           +SR   L   EFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT
Sbjct: 43  SSRINKLVVPEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT 102

Query: 141 LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDVLHLF 184
           LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDE DVLHLF
Sbjct: 103 LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEDDVLHLF 146

[Close]

BLAST of Csor.00g188060 vs. NCBI nr
Match: XP_022967917.1 (protein cornichon homolog 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 176 bits (447), Expect = 3.30e-53
Identity = 90/104 (86.54%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 81  TSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT 140
           +SR   L   EFLVQG+FCSLFLFTGHWFMFLITVPVSCYHINLFLK+EHLIDVTEVF+T
Sbjct: 43  SSRINKLVIPEFLVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRT 102

Query: 141 LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDVLHLF 184
           LKREKYFR AKLIFYLLLFLVVIFRLTLSAFN+LSDE D+LHLF
Sbjct: 103 LKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDILHLF 146

[Close]

BLAST of Csor.00g188060 vs. ExPASy TrEMBL
Match: A0A6J1HTX3 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466123 PE=3 SV=1)

HSP 1 Score: 184 bits (467), Expect = 1.46e-56
Identity = 96/104 (92.31%), Postives = 97/104 (93.27%), Query Frame = 0


Query: 81  TSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT 140
           +SR   L   EFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT
Sbjct: 43  SSRINKLVVPEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT 102

Query: 141 LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDVLHLF 184
           LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDE DVLHLF
Sbjct: 103 LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEDDVLHLF 146

[Close]

BLAST of Csor.00g188060 vs. ExPASy TrEMBL
Match: A0A6J1EAS8 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432423 PE=3 SV=1)

HSP 1 Score: 184 bits (467), Expect = 1.46e-56
Identity = 96/104 (92.31%), Postives = 97/104 (93.27%), Query Frame = 0


Query: 81  TSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT 140
           +SR   L   EFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT
Sbjct: 43  SSRINKLVVPEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT 102

Query: 141 LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDVLHLF 184
           LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDE DVLHLF
Sbjct: 103 LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEDDVLHLF 146

[Close]

BLAST of Csor.00g188060 vs. ExPASy TrEMBL
Match: A0A6J1HS45 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467288 PE=3 SV=1)

HSP 1 Score: 176 bits (447), Expect = 1.60e-53
Identity = 90/104 (86.54%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 81  TSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT 140
           +SR   L   EFLVQG+FCSLFLFTGHWFMFLITVPVSCYHINLFLK+EHLIDVTEVF+T
Sbjct: 43  SSRINKLVIPEFLVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRT 102

Query: 141 LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDVLHLF 184
           LKREKYFR AKLIFYLLLFLVVIFRLTLSAFN+LSDE D+LHLF
Sbjct: 103 LKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDILHLF 146

[Close]

BLAST of Csor.00g188060 vs. ExPASy TrEMBL
Match: A0A6J1EKZ6 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435524 PE=3 SV=1)

HSP 1 Score: 176 bits (445), Expect = 3.21e-53
Identity = 90/104 (86.54%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 81  TSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT 140
           +SR   L   EF+VQG+FCSLFLFTGHWFMFLITVPVSCYHINLFLK+EHLIDVTEVF+T
Sbjct: 43  SSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRT 102

Query: 141 LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDVLHLF 184
           LKREKYFR AKLIFYLLLFLVVIFRLTLSAFN+LSDE DVLHLF
Sbjct: 103 LKREKYFRLAKLIFYLLLFLVVIFRLTLSAFNSLSDEDDVLHLF 146

[Close]

BLAST of Csor.00g188060 vs. ExPASy TrEMBL
Match: A0A1S3B4V0 (protein cornichon homolog 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486176 PE=3 SV=1)

HSP 1 Score: 172 bits (437), Expect = 5.27e-52
Identity = 88/104 (84.62%), Postives = 95/104 (91.35%), Query Frame = 0


Query: 81  TSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT 140
           +SR   L   EFLVQG+FCSLFLFTGHWFMFLITVPV+CYHINLFLKREHLIDVTEVF+ 
Sbjct: 43  SSRINKLVLPEFLVQGVFCSLFLFTGHWFMFLITVPVTCYHINLFLKREHLIDVTEVFRA 102

Query: 141 LKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDVLHLF 184
           LKREKYFR AKLIFYLLLFL+VIFRLTLSAFN+LSDE +VLHLF
Sbjct: 103 LKREKYFRLAKLIFYLLLFLIVIFRLTLSAFNSLSDEDNVLHLF 146

[Close]

BLAST of Csor.00g188060 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 102.4 bits (254), Expect = 3.9e-22
Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = 0


Query: 62  CRNGVESDLLVRLFLYQHRTSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYH 121
           C   +E+D L         ++R   L   EF++QG  C LFL T HW  FL+ VPV+ YH
Sbjct: 28  CLTDLEADYLNPF----ETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYH 87

Query: 122 INLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSDEGDVL 181
             L+ +R +LIDVTEVF+ +  EK  R+ KL FY+ LF++V+FRLTLSA  + +++ D+L
Sbjct: 88  AMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIMVVFRLTLSAVYSFTEDDDLL 146

Query: 182 HLF 185
           HLF
Sbjct: 148 HLF 146

[Close]

BLAST of Csor.00g188060 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 73.2 bits (178), Expect = 2.5e-13
Identity = 38/86 (44.19%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 91  EFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFA 150
           EF+VQG+ C  +L TGHWFM L+ +P   Y+ +L+ KR+HL+DVTE+F  L  EK  R  
Sbjct: 44  EFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLF 103

Query: 151 KLIFYLLLFLVVIFRLTLSAFNALSD 177
           KL + +L   + IF +  SA +   D
Sbjct: 104 KLAYIVLNLFLTIFWMIYSALDDYED 129

[Close]

BLAST of Csor.00g188060 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 73.2 bits (178), Expect = 2.5e-13
Identity = 38/86 (44.19%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 91  EFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFA 150
           EF+VQG+ C  +L TGHWFM L+ +P   Y+ +L+ KR+HL+DVTE+F  L  EK  R  
Sbjct: 52  EFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLF 111

Query: 151 KLIFYLLLFLVVIFRLTLSAFNALSD 177
           KL + +L   + IF +  SA +   D
Sbjct: 112 KLAYIVLNLFLTIFWMIYSALDDYED 137

[Close]

BLAST of Csor.00g188060 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-11
Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 82  SRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTL 141
           SR   +   E ++QG  C  +L TGHWFM L+ VP   Y+ +L+ +++HLIDVTE+F  L
Sbjct: 43  SRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLL 102

Query: 142 KREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSD 177
             EK  R  KL + +L   + IF L  S  +   D
Sbjct: 103 DWEKKKRLFKLAYIILTLFLTIFWLIYSTLDDYED 137

[Close]

BLAST of Csor.00g188060 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 61.2 bits (147), Expect = 9.8e-10
Identity = 36/90 (40.00%), Postives = 54/90 (60.00%), Query Frame = 0


Query: 81  TSRPQLLPALEFLVQGLFCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKT 140
           +SR   +   EF +QGL C  ++ TGHWFM ++++P   Y+I L++KREHL DVTE++ T
Sbjct: 42  SSRINRMVLPEFGLQGLLCLYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNT 101

Query: 141 LKREKYFRFAKLIFYLLLFLVVIFRLTLSA 171
            K E+  R  K+    L   +  + L  SA
Sbjct: 102 NKWEQKKRVYKIGHIALSIFITTYWLIHSA 131

The following BLAST results are available for this feature:

BLAST of Csor.00g188060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7D7	5.4e-21	45.53	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]
Q3EDD7	3.5e-12	44.19	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q84W04	3.5e-12	44.19	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	1.5e-10	40.00	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
P38312	1.6e-09	41.67	ER-derived vesicles protein ERV15 OS=Saccharomyces cerevisiae (strain ATCC 20450...	[more]

BLAST of Csor.00g188060 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595652.1	1.59e-124	100.00	Protein cornichon-like 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7027612.1	2.61e-57	93.27	Protein cornichon-like 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022925062.1	3.02e-56	92.31	protein cornichon homolog 1-like isoform X1 [Cucurbita moschata] >XP_022966479.1...	[more]
XP_023518963.1	3.02e-56	92.31	protein cornichon homolog 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022967917.1	3.30e-53	86.54	protein cornichon homolog 1-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Csor.00g188060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HTX3	1.46e-56	92.31	protein cornichon homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EAS8	1.46e-56	92.31	protein cornichon homolog 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1HS45	1.60e-53	86.54	protein cornichon homolog 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EKZ6	3.21e-53	86.54	protein cornichon homolog 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A1S3B4V0	5.27e-52	84.62	protein cornichon homolog 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486176 P...	[more]

BLAST of Csor.00g188060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12180.1	3.9e-22	45.53	Cornichon family protein	[more]
AT1G12340.1	2.5e-13	44.19	Cornichon family protein	[more]
AT1G12390.1	2.5e-13	44.19	Cornichon family protein	[more]
AT1G62880.1	1.1e-11	40.00	Cornichon family protein	[more]
AT4G12090.1	9.8e-10	40.00	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 19..164 e-value: 6.8E-17 score: 72.1
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 89..164 e-value: 1.1E-21 score: 77.4
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 90..167
None	No IPR available	PANTHER	PTHR12290:SF11	PROTEIN CORNICHON	coord: 90..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g188060.m01	Csor.00g188060.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane