Csor.00g187970 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g187970
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RAB GTPase homolog A4D
Location	Csor_Chr07: 7742655 .. 7751585 (-)
RNA-Seq Expression	Csor.00g187970
Synteny	Csor.00g187970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTTTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTCCTTTCGCGATTTTCAAGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCTGGACAGGAAAGGTATGTTGTGTTTAATTCTTCTTGTTTTGTTTCTCGTCGAGTACTTCATTGTGTTCATGCTTTTGGATCTGTGATAGCTTTTAGAGATGAATATTGGAATGTGCTCTTCAACTTTGTTCTAACTTATAGCTTGAGTAGATGAATGATTGTATGATACCAACATAGAATTTGTAACAGGCTAAGCCCACCGCTAGGAGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCTTCTCCCTAGTAGACGCTTTTTAAAGCCTTGAGGAAAAGCTTAGAAGGAAAGGCCCAAAGAGGACAATATTTGCTAGCGGTGGGCTTGAGGTGTTACAAATGGTATTAGAGCCAGACACTGGGCGGTTTGCTAACGAGGACGCTGGGCCCCCAAGGGGGGTGGATTGTTAGACCCTACATCGATTGTTGAGAGAAACGAAGTATTACTTATAAGAGTGTGGAAACCTCTCCCTAGCAGACAGATGCAGTTTAAAACCTCGAGGGGAAGCCCAAAGAGGAATATCTATTAGCGGTGGGCTTGGGGATTCCACACCCTTATGAAGAATGTTTTGTTCTCCTCTCCAACCAATGTGGGATCTTACAATAAGGATAGTTTCTAGATGAGTACCCATTTCATTGCACAGCTCTGAAAGATGCGTTTTAAAACCTTGAGGGGAAACCTAAAGAGGACAATATTTGTTAGCGTGAGTTTGGGCTGTTACAAATCTTAGGATAGTTTCTAGATGAGTACCCATTTCATTGCACAGCTCTGAAAGATGCGTTTTAAAACCTTGAGGGGAAACCTAAAGAGGACAATATTTGTTAGCGTGAGTTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCGAGCAGTATGCCAGCGAGGACGCTGGGCCCCTAAGGGGGTGGATTGTGAGACCCCACGTCAGTTGGAGAGGGGAACGGTGTTTGGAATCACGGATCTCCACAATGGTATAATATCGTCCACTTTGAGCATAAGCTCTCATGGCTTTGATTTGGGCTTTCCTAAAAGGCCTCATACGAATGGAGATAGTATTCTTTGCTTATAAACCCATAATCATTCCCTAAATTAGCCAATGTGGGACTCACACCCAACAATCCTCAACAATCCTCTCCTCGAACAAAGTACACTATAAGCCTCCCTTTAATCGAGGCTCGACTCCTTTTTCTGGAGCCCTCGAACAAAGTACCCTCTTTGTTCGACACTTTAGTTACTTTTGACTACACCTTCGAGGCTCACAATTCGTTGTTCGATATTTGAGGATTCTATTGTCATGACTAAGTTTAGGGCATGGCTCTGATACCATACGGATCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATACCAATGAGATAGTATTCCTTGCTTATAAACTCATGATCATTCACTAATTAGCCAAGGTAGGACTCACACCCAACAATTCTTAACAAACGAAGCATTCCTTGTAAGGGTGTGGAAACCCCTCACTAGTAGACGCATTTTAAAGCCTTGAAGAGAAACTCGAAAGGGAAAGCCAAAAGTGGACAATTTCTGCTACCAGTGGCTTGGGCTTTTATAGAATTAGAGAGCAAAGAGTTTGGAACCCTTGAATAGGATTGAAACTTGTTTTGTTGTTGTTTTCTCTGTACTCTCAAATCTAGAGAGATTGCAGAGATCCATTTATGTTTGAATGAGCTTGTGGTGATATCAGCTTTTGTGTATTAGCATGGTCTACTTTCTATTATTTTTTCCTGTGTTTCTTATATATAGCTGCAGCGCATTCTTGTCCTGTTTCAGATTTATTGAAATTGTTGTGATAAGATCGATAAGTCATAGGTTTGTTTTATGTATGCTTGGAAAAGACATAATGAAAGAATGAGTTGTTGGGAGAAAAATGAGAAGGGTTTGATCTATGTGGGACTCGAGTATGAGGCCCGATTTTCGTGATTCTCTTATTGTAGGATCGGAATGCAAACACAAGAGGACTCGGTTCTGCATAAATTTGAGAGGAAGGTAGGGGAAAAGGTGAGTGAAGTCGGGGGGGAGTCGGGAGACCTTTCTCGAGTTTGTTAACTTTTGTTCTTTTGCTAAGAGGATTGATACAAAAGTGTATTTCAAGTCAGGGAAGTTCTATCAAATTGCTATTAGAGAATTTTCTTAGGCATGCCTTGGAGTCACTTGAGTTGCACTTAGGATTAGTTGTGCGGAAGCTTGATGTAAGAGCCTAAGTCCACCGCTAGCAGATACTGTTCTCTTTGGGCTTTCCCTTTCAGGCTTCCCCTCAAGGTTTCTAAAACGCGTTTGCTAGGGAGAGATTTCCATATCCTTATAAAGAATGCTTTGTTCCCCTCTCCAATCGATATGGGTTCTTTCAATCCACCCCCTTCGGGGTTCGTCCAACATCCTCGCTAGCACACCGCCTGGTGTCCACCCCCCTTTAGAGTTCAGCCTCCTCGCTAGCCCATCACCTGGTGTCTGGCTCTAATATAATTTGTAACAGCTCAAGCCTACTGCTAGCAGATATTGTCTCTTTGGGCCTTTCCCTCGAGATTTTTGAAACGCATTTGCTAGGGAGAGATTTCCATACCCTTGTAAAGAATGTTTCGTTCTTCTTTTCAATCGATGTGGGATCTCATAACCCATCCCCCCCTAGGCCCAACATCTTCGCTGGCACTCGTTCCCCTCTCCAATCGATGTGGGACCCCCCAATCCACCCCATTCAGGGCTTAACGTCCTGGCTGACACCATGCTTGGTGTCGATCCCCCTTTAGAATTCAGCCTCATCGCTGGCACATCATCCGATGTCTGACTTTGTAACCGCCCAAGCCCACTGCAAGCAAATAATTGTCCCCTTTGGGCTTTTCTTTTCGAGTTTCTCCTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGGTTCGTTCTCCTCTCCAATCGATGTGGGATCTCTCACCTGAAGTGCCAAGTAACGGAAAGGACATCATCATTTGGATTAACCAATGAATAAGTTAGCTGAAGCAAAAGGGAGGAGGAATGAATTGTGACGAGGGACAAGACAATTGAATTAAGGAGTGGGAGAGGCCAGTGAGATAATGAGGAGGAAGTCAGGCATAAATGAACAAACCGCAAGAAGGCTAGAGCTGCCTCAATTGAATGGAGTCAATCCGGATGGATGGACGAGTCGTCAATCTCTTTGCACTTGGTGAAGTTCAAGCTGGTGACGATAGCTCGATTTCTTACGACATCACATGAAGCAACGCCATATGAGCTTTTTTTAGCTCTACAACAGGAGAGGAATCCGTACTAACTCAATGGATTGGCAGAGCAATGGTGGACGCCCCATCAAAAAGGTGGAAGTTTGGATGGGGTCTTGATGAATAAACGAGCCACGAGTTCGGTTTACGTATTCGAGGAAGAAAACGAGAGAATTGGGTTAACTTGAATGCTAACCAGAATGGTGTGAGTCATGCAGGACTCAAATTAGTTAGGAGTAGTGAGGTGCATCGTTTATAATTCCGATATCATCAGACGTGAGAGATGTCGAAGGAGAACGTTATGGAATAGTTGAGGAGAGTTCGATACGTATATCTGACGAAATAAGATTCCGAAAATTGATGTTATGAACTTAAATTGTGTAGATTACGATGAAGTTGTTGATAGTTTCTTATGATATCTTTGTTATCTCCATTGTCAGATACCGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTAGGAGCCATGCTAGTTTACGATATGACGAAGCGTCAATCGTTCGACCACATGGCGCGGTGGCTGGAGGAGCTAAGAGGACATGCTGATAAGAACATCGTCATAATGCTGATCGGAAACAAATGCGACTTAGGAAGCCTCCGAGCAGTGCCAACAGAAGATGCACAGGAATTTGCTGAAAGAGAGAACCTGTTCTTCATGGAGACGTCGGCTCTGGAGTCGACGAACGTCGAAACTGCGTTCTTCAGAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAGAGTCTTGCAGCTGGGGAATCGATAGATATTGGCGTGAATCCAGCGCTGTTTAAAGGGACAAACATAGTTGTTCCTGGACAGGACCAGGCTGGTGGGAGAAAAGGGTGCTGCTTTGCCTCATGAGTTTCCATATAATTCCATCATCATTTCAGTTGGGACATTGTTTTTCTATTCCACTTTTGATTTATACTAAGAAAAAAAGATTCATGTATTTGTATTTTGTAGAGGAACTGGCTTTATACCATGGATGAAGGATTAGTGAAGCTTATCATCTCTTTATCTCTCTCTCCCTCTCTTTTAACAAATTAATTTTGTAACGTCCCACGATTAGGGTTCGATTTAGGATTTGGAACTCTCCGGTATTCTCCTATATACCCTGCGACATGGTTATGTTACCTATTTGTCTATATGGTTCAAATAAGGATTTGGAATTTGAATTCGACATTTGATGCCTCCTACATACCCTGCGTACCTACTTGTGTCAGGATTTGGAATTTGAATTCGACATTTGATGTCTCTTGTATACCCTACAACATGGTCACGTTACCTACTTGTCAAGCAAAACAAGTAGTATAGGTAGGTATAACTTTAATTCTTTTGAACTTTTTTCAACCCAATGGCCGTCTCTTATTCAGATATGATCTTGATTCATTTGTGTATCACTCTTTCACTCATGTTGTGTATGAACCAAATCTGAAAGCATCTTACTGGATCTACGCAAACACATCCGACTTAACTTTTTCACGAAAATTATGTTTCAGCACCAAAGATGATTGTGAAGGTAATTACGAAATAACCAACATGCAATTACCGTCAAATAGTTATCATCATTTAAAGGTGATCGTGTTTTAACTAATGTGCAATCATCACATACGAACAACCCAGTCATGAATTAAACACGACCCCAAAAAAATTTATAAATCATGTTTCATAACACATCATAATTCACCCCTAAATTCGATCCAAAATTAGCACATGATCCCAGCAAGTTGTAAATTCTGAAAAGGTTGGAGCCCTTGTTAATCCACTCCTACGAGCTATGAGTAATTAAAAAATATAATGGTTTTCTTCTATCGATTACAAAAATATTTTCTTAAGATGCGAGACATTAAAATCTACCCATCTTAAAAGAAGTTTTGTTCCCGAAAGTTTCATTTATCAAACCTCCCTAGTTACTAGCTCGAGTCTCATAATTCTTGGAAGAGTTCGAGAAGCTTAACCATCGTCTTATTCTCTTATTTTCACATTGTTTCTATAAGTTACTTCACCACTATCACGTAGAAGAACTTCAAGTTTCTCACCCAACATCCATATAACTATTTAGTCTACTCGGTACGTTGTATACATCCAACTGCAAAAGAGCAATAGATCACGTACAAGAACTTCTAAGCTGTGTGTAGAAAAGTACCAAGCATCCAAACCTCCTTAAAAATGAAATTTGAACTATTTTAGATCTCATTTAAACATGAAACACTAGATCATGTCGCCTTGTAGATGCAAAAGAGGATAACCAGAGGATGAAATGGGGTTAAAATAACTCGTGATGCTTCAGTGATTTTAGGTTTAGGATCTAGTAGGGTTGACCCCTGCCATGTCTGCCATTATATAAAGGACTTTTTATGTAATGTTACAGACTGTTGAATCGAATTGCTTCAAGTTATTATCGTCATTGATTAAAAATTTTATTTATTTTTAATAAAAACATGTTTATATGTAAAATAGTTTATTTATATTTTTAATTTTTTTTTTAAAAGTTTAAAAGTGTTTTTAAAGTTTAAAAAAAGTGATGTTTTTGAAAAATATAGTAAAAACAAAATTAATAATAAGGGTATTTTGAACTTTTCTAAAAAGGTTAAGGGTAGTTTTGACCTTTTAGACAAAATATTAAGGTCAGATATTTTTTTTATTAATGTAGTATTTTGCACACGTGTAAGCAGAACACAATGGGATTTAAAACATAAGGACTATATAGTCATTTCACAGCGAGCTAAAAAAGAATTGGGTTTCAAAAATGAAGATCCCGCTCTTGCAACAAATTTGAAATTCAAATCGGAAAATTGAAAAATGGGTTTAAGTAGCGCCCAAATTTTCACATTTTGAAAATCGCCCAAAATTTCGCCTTTCTCTCAAACAACCTCCATCTTCTTCCCTCTCATTTTTCAACTGCGCGTCTCAGAGAGCGCCTCCCACCAATCCACCGCCATTCTTTTTTGTTTCTTGTATTTTGGTCAAACCAAATAAACTCCATTGAAGCCCACTGGAATCTCACGGTATGATTCATCTCCTTCTTCCTTTTTCTCATCTCTTTCTTCAGATTTTAGAAATGAAATGTAGGTTTTAACTCGAAGAATCTGGTTCTTGTTACTGTAAGAATCTTCTGTTTTTCTTTTGAAATGATTGTTTTCTTGTTTCTTCTGAAGTTCCATAATGTCGGAATCAAGGGATAGATTGGAGAGGCAAGTGGACTATGCCGAGGTCTTTGCTCGTCGGAGATCAGAAGGCGGTATATTGGACGAGCAAGAAATGAGTACTACTTTGATCGGGACTCCGATCGCACGCGCCACAACGACGACTACAGCTCAACAAAGACCTACGAATCTCGGGCCTGGAGGTGGTGGTGGTGGTGGTGGTGCGATTCCGAGACGCAGTTTTGGTTCTCCCATTTCTGGTGGAATTGGACGTAATAGATTTCTTTACAGATCTCCAGTTTTGAGCCGCGAGAATACGGCGGCTGGGAGTTCCAGACGGAGTAGATCCCGGGTGAGGCATAGTGTTTTGCCGATTTGGTATCCAAGAACTCCACTCCGCGACATTACTGCAGTTGTGAGGGTAAATGACTAACTCTCCTCTTATTTTGATTCTGCTCTGCTAGATCTTTCAAGTGTTCGTTGTGTTCTGCATTCAATTTGTGGAGTATCTGCACATAGCATCTATTGAAATTTCTCTACTTATTGCATTTCAACTGGTGAATTTGATTCATATGAGTTCTGTTAAATTCACTCATTGTCATTGCATCTCTCTCTCTCTCTCTGGTATTCATATACACCAATATCTTGAGATATCTGTTCTCTAATACTGTATGCTTGTTTGTTTAGATTCATTCTAATTTGAAGTTGCTTGAACTTTCGGAAACCCTCTTGATTTTTTTTATTTTTATTATTTTTTTTTTCTGTAGTTGTGATCTTGTTTCTGTTTTTCAGTTGGTAGGATTTGATTTGATTTGAGTTGAGCTGACTTTTAATCGGAAATGTTAATTTCATATGTCCAATCCATTTTTGTGAATCCTGAGATCGGATTACTTTCCTTGCCCTTTAAGTTAGTTAATTAATTAATATATTTCCAGTTCTTAAGCAAATTGACTACCGACTTGTTTGTCTAAAAAGAAGATTCTCTTTGTTTTGTAACGTCCATGCTCAATGATTCCATATGTAACATCAACAGTCTTGATAATGATATCCTGTCAACCATTTACTTGTTAGTTTGTCACGTAATTCTTCTCCTTGTTAGTTTGTTTCTTTATTATTTTATTTTTATTCAAATTGTTTTCTAGGCTTTGTTTTAACCTATTATTTGAACTACTTTTTGGTGGGCTCACCATGCTTCGGCTGATTGCAGTGCATATTAGCACAAGATAATATCATTACTTGTGGGACATGTTTTCAACGCTTCTAACGCGTTTGCATTAATAGACACTTGTACTAACGTTTTTGATGTGTTCATATATTTATGTTGTTATTAATGAACAAAAAAATTAATTAATTTTGATTGTGACAAATATTTTACATTTTCAAGCCTCTAGGTACATGTACATTATTGACTTATCTATGTCACGTGATTGTGTCTATGCATCATTCATCTCAAATCTTTGCTACTTTTGAAGTTGGTTCCCTGATATTTTTGCTGTCAATTTGAGAAATTTCAACATTTTTCACGTTTTCAAGGATTTTATTTGATGAGAACTTCTATTAGAAGTCTTTATTGAGCAATGTCATTGTGAATTCTCTTTATAGAATTGCATATGGACTCAAGTTTTTGGGCTAATTCTTCACATTCCTGTTTCATGTGTTCAACTTATTTTGATTTTTTCTGGGTATTTAGTTACTCCTCCATGTCATCCAATAGCATCTGTGTTCTTCCTAGATATCTCCTTTCCTAGTTTTCCATTTGATGCGAGGTCAACTGGGGTTGTGCCATTTATAAGCATCTTCCAATAGTGTTCTTAACTTGGGGAGAATCATATTCTTAAATCAGGCAATTGAAAGAACACGAGCTCGGTTGAGAGAAAACGAAGGCCAAGGAAGTGATAATAGTCCAGCTCCCTCGGACGAAAGAGCTTTAGAGTTTAGCGCATCTGTGTCAGGTGGTCATCAAGAGCCAGACGTTTCTCTGGTCACCCCCAAACCAACCGTAGGCAAAGTTAACAAGATTCTTCGCGGAATTGCAAATGAGAATGTGGAAGAATCCGAGATGCTCACCCCACAGAAGAAACTCTTGAACTCCATCGACAAAGTGGAGAAAGTAGTGAGGGAGGAGTTGCAGAAATTGAGAAAGACACCGAGTGCAAAGAGAGCCGAGAGGGAAAAAAGAGTTCGCACTTTGATGTCATTTCGTTGA

mRNA sequence

ATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTTTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTCCTTTCGCGATTTTCAAGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCTGGACAGGAAAGATACCGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTAGGAGCCATGCTAGTTTACGATATGACGAAGCGTCAATCGTTCGACCACATGGCGCGGTGGCTGGAGGAGCTAAGAGGACATGCTGATAAGAACATCGTCATAATGCTGATCGGAAACAAATGCGACTTAGGAAGCCTCCGAGCAGTGCCAACAGAAGATGCACAGGAATTTGCTGAAAGAGAGAACCTGTTCTTCATGGAGACGTCGGCTCTGGAGTCGACGAACGTCGAAACTGCGTTCTTCAGAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAGAGTCTTGCAGCTGGGGAATCGATAGATATTGGCGTGAATCCAGCGCTGTTTAAAGGGACAAACATAGTTGTTCCTGGACAGGACCAGGCTGCACCAAAGATGATTGTGAAGCCCACTGGAATCTCACGTTCCATAATGTCGGAATCAAGGGATAGATTGGAGAGGCAAGTGGACTATGCCGAGGTCTTTGCTCGTCGGAGATCAGAAGGCGGTATATTGGACGAGCAAGAAATGAGTACTACTTTGATCGGGACTCCGATCGCACGCGCCACAACGACGACTACAGCTCAACAAAGACCTACGAATCTCGGGCCTGGAGGTGGTGGTGGTGGTGGTGGTGCGATTCCGAGACGCAGTTTTGGTTCTCCCATTTCTGGTGGAATTGGACGTAATAGATTTCTTTACAGATCTCCAGTTTTGAGCCGCGAGAATACGGCGGCTGGGAGTTCCAGACGGAGTAGATCCCGGGTGAGGCATAGTGTTTTGCCGATTTGGTATCCAAGAACTCCACTCCGCGACATTACTGCAGTTGTGAGGGCAATTGAAAGAACACGAGCTCGGTTGAGAGAAAACGAAGGCCAAGGAAGTGATAATAGTCCAGCTCCCTCGGACGAAAGAGCTTTAGAGTTTAGCGCATCTGTGTCAGGTGGTCATCAAGAGCCAGACGTTTCTCTGGTCACCCCCAAACCAACCGTAGGCAAAGTTAACAAGATTCTTCGCGGAATTGCAAATGAGAATGTGGAAGAATCCGAGATGCTCACCCCACAGAAGAAACTCTTGAACTCCATCGACAAAGTGGAGAAAGTAGTGAGGGAGGAGTTGCAGAAATTGAGAAAGACACCGAGTGCAAAGAGAGCCGAGAGGGAAAAAAGAGTTCGCACTTTGATGTCATTTCGTTGA

Coding sequence (CDS)

ATGTCGAATCTATATGGGGATTATAATCAGAAGATTGATTATGTTTTCAAAGTTGTTTTGATCGGAGATTCGGCCGTCGGCAAAACCCAACTCCTTTCGCGATTTTCAAGGAATGAATTTAGCGTTGATTCCAAAGCTACTATTGGAGTCGAGTTTCAGACTAAAACTCTCGTTATTGATCAGAAAACAGTGAAAGCCCAGATATGGGATACTGCTGGACAGGAAAGATACCGAGCAGTGACAAGTGCATACTACAGAGGTGCAGTAGGAGCCATGCTAGTTTACGATATGACGAAGCGTCAATCGTTCGACCACATGGCGCGGTGGCTGGAGGAGCTAAGAGGACATGCTGATAAGAACATCGTCATAATGCTGATCGGAAACAAATGCGACTTAGGAAGCCTCCGAGCAGTGCCAACAGAAGATGCACAGGAATTTGCTGAAAGAGAGAACCTGTTCTTCATGGAGACGTCGGCTCTGGAGTCGACGAACGTCGAAACTGCGTTCTTCAGAATTCTAACAGAGATTTATAGGATAATCAGCAAGAAGAGTCTTGCAGCTGGGGAATCGATAGATATTGGCGTGAATCCAGCGCTGTTTAAAGGGACAAACATAGTTGTTCCTGGACAGGACCAGGCTGCACCAAAGATGATTGTGAAGCCCACTGGAATCTCACGTTCCATAATGTCGGAATCAAGGGATAGATTGGAGAGGCAAGTGGACTATGCCGAGGTCTTTGCTCGTCGGAGATCAGAAGGCGGTATATTGGACGAGCAAGAAATGAGTACTACTTTGATCGGGACTCCGATCGCACGCGCCACAACGACGACTACAGCTCAACAAAGACCTACGAATCTCGGGCCTGGAGGTGGTGGTGGTGGTGGTGGTGCGATTCCGAGACGCAGTTTTGGTTCTCCCATTTCTGGTGGAATTGGACGTAATAGATTTCTTTACAGATCTCCAGTTTTGAGCCGCGAGAATACGGCGGCTGGGAGTTCCAGACGGAGTAGATCCCGGGTGAGGCATAGTGTTTTGCCGATTTGGTATCCAAGAACTCCACTCCGCGACATTACTGCAGTTGTGAGGGCAATTGAAAGAACACGAGCTCGGTTGAGAGAAAACGAAGGCCAAGGAAGTGATAATAGTCCAGCTCCCTCGGACGAAAGAGCTTTAGAGTTTAGCGCATCTGTGTCAGGTGGTCATCAAGAGCCAGACGTTTCTCTGGTCACCCCCAAACCAACCGTAGGCAAAGTTAACAAGATTCTTCGCGGAATTGCAAATGAGAATGTGGAAGAATCCGAGATGCTCACCCCACAGAAGAAACTCTTGAACTCCATCGACAAAGTGGAGAAAGTAGTGAGGGAGGAGTTGCAGAAATTGAGAAAGACACCGAGTGCAAAGAGAGCCGAGAGGGAAAAAAGAGTTCGCACTTTGATGTCATTTCGTTGA

Protein sequence

MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAAPKMIVKPTGISRSIMSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGPGGGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSLVTPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKRAEREKRVRTLMSFR

Homology

[Close]

BLAST of Csor.00g187970 vs. ExPASy Swiss-Prot
Match: Q9LH50 (Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 8.1e-101
Identity = 186/216 (86.11%), Postives = 199/216 (92.13%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAAPK 217
           SKKSL A +  D   N +L KGT I++P + ++  +
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKR 215

[Close]

BLAST of Csor.00g187970 vs. ExPASy Swiss-Prot
Match: P25766 (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 SV=2)

HSP 1 Score: 347.8 bits (891), Expect = 1.9e-94
Identity = 173/211 (81.99%), Postives = 191/211 (90.52%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG+  QKIDYVFKVVLIGDSAVGK+QLL+RF+RNEF++DSKATIGVEFQT+TL ID +TV
Sbjct: 8   YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTV 67

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKNIVIM
Sbjct: 68  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIM 127

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNK DLG+LR VPTEDA+EFAERENLFFMETSALESTNVE AF  +LTEIYRI+SKK+
Sbjct: 128 LIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKN 187

Query: 185 LAAGESIDIGVNPALFKGTNIVVPGQDQAAP 216
           L A E +D   N +L KGT IVVPGQ+ A P
Sbjct: 188 LVANEEVDSSGNSSLLKGTKIVVPGQEPAPP 218

[Close]

BLAST of Csor.00g187970 vs. ExPASy Swiss-Prot
Match: Q9FE79 (Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 7.6e-91
Identity = 166/211 (78.67%), Postives = 191/211 (90.52%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLL+RFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F  +LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQD 212
           SKK+L A E  + G + +L +GT IVV G++
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEE 211

[Close]

BLAST of Csor.00g187970 vs. ExPASy Swiss-Prot
Match: Q40191 (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.9e-86
Identity = 162/211 (76.78%), Postives = 184/211 (87.20%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD N KIDYVFKVVLIGDSAVGK+Q+L+RF+RNEFS+DSK+TIGVEFQT+TLVID KTV
Sbjct: 7   YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNKCDL + R VPTEDA+EFAE+E LFF+ETSALE+TNVE+AF  +LTEIY I++KKS
Sbjct: 127 LIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKS 186

Query: 185 LAAGESIDIGVNPALFKGTNIVVPGQDQAAP 216
           LAA ES   G N A   G  I++PG  Q  P
Sbjct: 187 LAADESQGNG-NSASLSGQKIIIPGPAQEIP 216

[Close]

BLAST of Csor.00g187970 vs. ExPASy Swiss-Prot
Match: Q40522 (Ras-related protein Rab11D OS=Nicotiana tabacum OX=4097 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 4.1e-84
Identity = 156/216 (72.22%), Postives = 186/216 (86.11%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           M++ YGD +QKIDYVFKVVLIGDSAVGK+Q+L+RF+RNEFS+DSKATIGVEFQT+TL I 
Sbjct: 1   MASGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQ 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            K+VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQ+FDH+ RWLEELR HAD+N
Sbjct: 61  HKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNK DL   RAVPTEDA+EFA++E LFF+ETSA+E+TN+E AF  +LTEI+ I+
Sbjct: 121 IVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIV 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAAPK 217
           +KK+LAA ++   G NPA   G  I+VPG  Q  P+
Sbjct: 181 NKKNLAADDNQSNG-NPASLTGKKILVPGPGQVIPE 215

[Close]

BLAST of Csor.00g187970 vs. NCBI nr
Match: KAG6595661.1 (Ras-related protein RABA4d, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 915 bits (2366), Expect = 0.0
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAAPKMIVKPTGISRSIMSESRDRLERQV 240
           SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAAPKMIVKPTGISRSIMSESRDRLERQV
Sbjct: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAAPKMIVKPTGISRSIMSESRDRLERQV 240

Query: 241 DYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGPGGGGGGGGAIPR 300
           DYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGPGGGGGGGGAIPR
Sbjct: 241 DYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGPGGGGGGGGAIPR 300

Query: 301 RSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWYPRTPLRDITAV 360
           RSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWYPRTPLRDITAV
Sbjct: 301 RSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIWYPRTPLRDITAV 360

Query: 361 VRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSLVTPKPTVGKVNK 420
           VRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSLVTPKPTVGKVNK
Sbjct: 361 VRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSLVTPKPTVGKVNK 420

Query: 421 ILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKRAEREKRVRTLMS 480
           ILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKRAEREKRVRTLMS
Sbjct: 421 ILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKRAEREKRVRTLMS 480

Query: 481 FR 482
           FR
Sbjct: 481 FR 482

[Close]

BLAST of Csor.00g187970 vs. NCBI nr
Match: XP_022966440.1 (protein POLYCHOME [Cucurbita maxima])

HSP 1 Score: 470 bits (1209), Expect = 1.23e-162
Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 0


Query: 229 MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 288
           MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP
Sbjct: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60

Query: 289 GGGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW 348
           GGGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW
Sbjct: 61  GGGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW 120

Query: 349 YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL 408
           YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL
Sbjct: 121 YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL 180

Query: 409 VTPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR 468
           VTPKPTVGKV KILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR
Sbjct: 181 VTPKPTVGKVTKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR 240

Query: 469 AEREKRVRTLMSFR 482
           AEREKRVRTLMSFR
Sbjct: 241 AEREKRVRTLMSFR 254

[Close]

BLAST of Csor.00g187970 vs. NCBI nr
Match: XP_023518760.1 (protein POLYCHOME-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 470 bits (1209), Expect = 1.23e-162
Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 0


Query: 229 MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 288
           MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP
Sbjct: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60

Query: 289 GGGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW 348
           GGGGGGGGAIPRRSFGSPISGGIGRNR LYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW
Sbjct: 61  GGGGGGGGAIPRRSFGSPISGGIGRNRLLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW 120

Query: 349 YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL 408
           YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL
Sbjct: 121 YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL 180

Query: 409 VTPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR 468
           VTPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR
Sbjct: 181 VTPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR 240

Query: 469 AEREKRVRTLMSFR 482
           AEREKRVRTLMSFR
Sbjct: 241 AEREKRVRTLMSFR 254

[Close]

BLAST of Csor.00g187970 vs. NCBI nr
Match: XP_022925136.1 (protein POLYCHOME-like [Cucurbita moschata] >KAG7027617.1 Protein POLYCHOME [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 466 bits (1199), Expect = 3.92e-161
Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 0


Query: 229 MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 288
           MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP
Sbjct: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60

Query: 289 GGGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW 348
           GGGGGGG AIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW
Sbjct: 61  GGGGGGG-AIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW 120

Query: 349 YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL 408
           YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL
Sbjct: 121 YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL 180

Query: 409 VTPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR 468
           VTPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR
Sbjct: 181 VTPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR 240

Query: 469 AEREKRVRTLMSFR 482
           AEREKRVRTLMSFR
Sbjct: 241 AEREKRVRTLMSFR 253

[Close]

BLAST of Csor.00g187970 vs. NCBI nr
Match: THG05194.1 (hypothetical protein TEA_013639 [Camellia sinensis var. sinensis])

HSP 1 Score: 479 bits (1232), Expect = 1.64e-160
Identity = 305/530 (57.55%), Postives = 349/530 (65.85%), Query Frame = 0


Query: 22  GDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIWDTAGQERYRAVT 81
           G S +GK+QLL+RF+RNEFS+DSKATIGVEFQTKTLVID KTVKAQIWDTAGQERYRAVT
Sbjct: 111 GLSCIGKSQLLARFARNEFSLDSKATIGVEFQTKTLVIDHKTVKAQIWDTAGQERYRAVT 170

Query: 82  SAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTE 141
           SAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTE
Sbjct: 171 SAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTE 230

Query: 142 DAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKSLAAGESIDIGVNPALFK 201
           DAQEFAERENL FMETSALE+TNVE+AF  +LTEIYRI+SKK+L A +  D   + +L K
Sbjct: 231 DAQEFAERENLCFMETSALEATNVESAFLTVLTEIYRIMSKKTLLANDGSDYAKSASL-K 290

Query: 202 GTNIVVPGQD----------------------------QAAPKMIVK------------- 261
           GT I+VP Q+                            Q++P +  +             
Sbjct: 291 GTRIIVPSQNSDSGGRKGCCMSSSSSSRAVQLYLNQQQQSSPALPKREDNNKSKNKTGSI 350

Query: 262 ---------PTGISRSIMSESRDRLERQVDYAEVFARRR-SEGGI---LDEQEMSTTLIG 321
                    P  +    M ESRDRL R  D A +FARRR S GGI   LDE E   +  G
Sbjct: 351 QVPSQDPPLPNHLKIDTMPESRDRLSRPDDIAAMFARRRQSIGGIAILLDEPEEVGS--G 410

Query: 322 TPIARATTTTTAQQRPTNLGPGGGGGGGGAIPRRSFGSPISG---GIGRNRFLYRSPVL- 381
           TP     T  T  +    L    GGG    + R S G+P +    G GRN  LYRSPV+ 
Sbjct: 411 TPFRWGATAMTGTRGAMGLAATRGGG----VGRGSLGTPRTRYRRGGGRN--LYRSPVVV 470

Query: 382 SRENTAAGSSRRSRSRV-RHSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNS 441
            +ENT  G  RR R R  R SVLP WYPRTPLRDITA+VRAIER RA LRE EG   + S
Sbjct: 471 GQENTPLGRVRRGRGRGGRGSVLPSWYPRTPLRDITAIVRAIERRRASLRETEGLHIE-S 530

Query: 442 PAPSDERALEFSASVSGGHQEPDVSLVTPKPTV----------GKVNKILRGIANENVEE 482
           P P D+  L+ S   S    E D+S+++P PTV          GKV KIL  I N+NV +
Sbjct: 531 PIPQDQNVLDPSVPTSSAQLEHDISMISPNPTVRMKKSFPPSVGKVPKILLDITNQNVGQ 590

[Close]

BLAST of Csor.00g187970 vs. ExPASy TrEMBL
Match: A0A6J1HRM8 (protein POLYCHOME OS=Cucurbita maxima OX=3661 GN=LOC111466091 PE=4 SV=1)

HSP 1 Score: 470 bits (1209), Expect = 5.96e-163
Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 0


Query: 229 MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 288
           MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP
Sbjct: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60

Query: 289 GGGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW 348
           GGGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW
Sbjct: 61  GGGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW 120

Query: 349 YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL 408
           YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL
Sbjct: 121 YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL 180

Query: 409 VTPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR 468
           VTPKPTVGKV KILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR
Sbjct: 181 VTPKPTVGKVTKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR 240

Query: 469 AEREKRVRTLMSFR 482
           AEREKRVRTLMSFR
Sbjct: 241 AEREKRVRTLMSFR 254

[Close]

BLAST of Csor.00g187970 vs. ExPASy TrEMBL
Match: A0A6J1EBD1 (protein POLYCHOME-like OS=Cucurbita moschata OX=3662 GN=LOC111432471 PE=4 SV=1)

HSP 1 Score: 466 bits (1199), Expect = 1.90e-161
Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 0


Query: 229 MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 288
           MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP
Sbjct: 1   MSESRDRLERQVDYAEVFARRRSEGGILDEQEMSTTLIGTPIARATTTTTAQQRPTNLGP 60

Query: 289 GGGGGGGGAIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW 348
           GGGGGGG AIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW
Sbjct: 61  GGGGGGG-AIPRRSFGSPISGGIGRNRFLYRSPVLSRENTAAGSSRRSRSRVRHSVLPIW 120

Query: 349 YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL 408
           YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL
Sbjct: 121 YPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEFSASVSGGHQEPDVSL 180

Query: 409 VTPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR 468
           VTPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR
Sbjct: 181 VTPKPTVGKVNKILRGIANENVEESEMLTPQKKLLNSIDKVEKVVREELQKLRKTPSAKR 240

Query: 469 AEREKRVRTLMSFR 482
           AEREKRVRTLMSFR
Sbjct: 241 AEREKRVRTLMSFR 253

[Close]

BLAST of Csor.00g187970 vs. ExPASy TrEMBL
Match: A0A4S4DR01 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_013639 PE=4 SV=1)

HSP 1 Score: 479 bits (1232), Expect = 7.94e-161
Identity = 305/530 (57.55%), Postives = 349/530 (65.85%), Query Frame = 0


Query: 22  GDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIWDTAGQERYRAVT 81
           G S +GK+QLL+RF+RNEFS+DSKATIGVEFQTKTLVID KTVKAQIWDTAGQERYRAVT
Sbjct: 111 GLSCIGKSQLLARFARNEFSLDSKATIGVEFQTKTLVIDHKTVKAQIWDTAGQERYRAVT 170

Query: 82  SAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTE 141
           SAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTE
Sbjct: 171 SAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTE 230

Query: 142 DAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKSLAAGESIDIGVNPALFK 201
           DAQEFAERENL FMETSALE+TNVE+AF  +LTEIYRI+SKK+L A +  D   + +L K
Sbjct: 231 DAQEFAERENLCFMETSALEATNVESAFLTVLTEIYRIMSKKTLLANDGSDYAKSASL-K 290

Query: 202 GTNIVVPGQD----------------------------QAAPKMIVK------------- 261
           GT I+VP Q+                            Q++P +  +             
Sbjct: 291 GTRIIVPSQNSDSGGRKGCCMSSSSSSRAVQLYLNQQQQSSPALPKREDNNKSKNKTGSI 350

Query: 262 ---------PTGISRSIMSESRDRLERQVDYAEVFARRR-SEGGI---LDEQEMSTTLIG 321
                    P  +    M ESRDRL R  D A +FARRR S GGI   LDE E   +  G
Sbjct: 351 QVPSQDPPLPNHLKIDTMPESRDRLSRPDDIAAMFARRRQSIGGIAILLDEPEEVGS--G 410

Query: 322 TPIARATTTTTAQQRPTNLGPGGGGGGGGAIPRRSFGSPISG---GIGRNRFLYRSPVL- 381
           TP     T  T  +    L    GGG    + R S G+P +    G GRN  LYRSPV+ 
Sbjct: 411 TPFRWGATAMTGTRGAMGLAATRGGG----VGRGSLGTPRTRYRRGGGRN--LYRSPVVV 470

Query: 382 SRENTAAGSSRRSRSRV-RHSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNS 441
            +ENT  G  RR R R  R SVLP WYPRTPLRDITA+VRAIER RA LRE EG   + S
Sbjct: 471 GQENTPLGRVRRGRGRGGRGSVLPSWYPRTPLRDITAIVRAIERRRASLRETEGLHIE-S 530

Query: 442 PAPSDERALEFSASVSGGHQEPDVSLVTPKPTV----------GKVNKILRGIANENVEE 482
           P P D+  L+ S   S    E D+S+++P PTV          GKV KIL  I N+NV +
Sbjct: 531 PIPQDQNVLDPSVPTSSAQLEHDISMISPNPTVRMKKSFPPSVGKVPKILLDITNQNVGQ 590

[Close]

BLAST of Csor.00g187970 vs. ExPASy TrEMBL
Match: A0A6J1EAZ2 (ras-related protein RABA4d OS=Cucurbita moschata OX=3662 GN=LOC111432472 PE=4 SV=1)

HSP 1 Score: 419 bits (1078), Expect = 1.49e-143
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQA 213
           SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQA
Sbjct: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQA 213

[Close]

BLAST of Csor.00g187970 vs. ExPASy TrEMBL
Match: A0A6J1HTU8 (ras-related protein RABA4d OS=Cucurbita maxima OX=3661 GN=LOC111466102 PE=4 SV=1)

HSP 1 Score: 418 bits (1074), Expect = 6.04e-143
Identity = 212/213 (99.53%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN
Sbjct: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQA 213
           SKKSLAAGESIDIGVNPALFKGTNIVVPGQ+QA
Sbjct: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQEQA 213

[Close]

BLAST of Csor.00g187970 vs. TAIR 10
Match: AT3G12160.1 (RAB GTPase homolog A4D )

HSP 1 Score: 369.0 bits (946), Expect = 5.8e-102
Identity = 186/216 (86.11%), Postives = 199/216 (92.13%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLL+RF+RNEFSVDSKATIGVEFQTKTLVID
Sbjct: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
            KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA+WLEELRGHADKN
Sbjct: 61  NKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNKCDLGSLRAVPTEDAQEFA+RENLFFMETSALE+TNVETAF  ILTEIYRII
Sbjct: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRII 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQDQAAPK 217
           SKKSL A +  D   N +L KGT I++P + ++  +
Sbjct: 181 SKKSLTADDD-DADGNSSLLKGTRIIIPSEQESGKR 215

[Close]

BLAST of Csor.00g187970 vs. TAIR 10
Match: AT5G47960.1 (RAB GTPase homolog A4C )

HSP 1 Score: 335.9 bits (860), Expect = 5.4e-92
Identity = 166/211 (78.67%), Postives = 191/211 (90.52%), Query Frame = 0


Query: 1   MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVID 60
           MS    ++NQKIDYVFKVVLIGDSAVGK+QLL+RFSRNEFS++SKATIGVEFQT+TL ID
Sbjct: 1   MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEID 60

Query: 61  QKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN 120
           +KT+KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+TKRQSFDH+ARWLEELRGHADKN
Sbjct: 61  RKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN 120

Query: 121 IVIMLIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRII 180
           IVIMLIGNK DLG+LRAVPTEDA+EFA+RENLFFMETSAL+S NVE +F  +LTEIYRI+
Sbjct: 121 IVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIV 180

Query: 181 SKKSLAAGESIDIGVNPALFKGTNIVVPGQD 212
           SKK+L A E  + G + +L +GT IVV G++
Sbjct: 181 SKKNLVANEEGESGGDSSLLQGTKIVVAGEE 211

[Close]

BLAST of Csor.00g187970 vs. TAIR 10
Match: AT5G65270.1 (RAB GTPase homolog A4A )

HSP 1 Score: 307.0 bits (785), Expect = 2.7e-83
Identity = 155/212 (73.11%), Postives = 182/212 (85.85%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YGD +QKIDYVFKVVLIGDSAVGK+Q+L+R++R+EFS+DSKATIGVEFQT+TLVID K+V
Sbjct: 7   YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYD+T+RQ+FDH+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNK DL   RA+PTEDA+EFAE+E LFF+ETSA  +TNVE+AF  +LTEI+ I++KKS
Sbjct: 127 LIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKS 186

Query: 185 LAAGESIDIGVNPALFKGTNI-VVPGQDQAAP 216
           LAA E  + G NP    G  I +VPG  Q  P
Sbjct: 187 LAASEDQENG-NPGSLAGKKIDIVPGPGQVIP 217

[Close]

BLAST of Csor.00g187970 vs. TAIR 10
Match: AT4G39990.1 (RAB GTPase homolog A4B )

HSP 1 Score: 295.0 bits (754), Expect = 1.1e-79
Identity = 148/212 (69.81%), Postives = 179/212 (84.43%), Query Frame = 0


Query: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTV 64
           YG  + K+DYVFKVVLIGDSAVGK+QLL+RF+R+EFS+DSKATIGVEFQT+TL I+QK++
Sbjct: 7   YGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSI 66

Query: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIM 124
           KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR++F+H+ RWLEELR HADKNIVI+
Sbjct: 67  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVII 126

Query: 125 LIGNKCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKS 184
           LIGNK DL   RAVPTEDA+EFAE+E LFF+ETSAL +TNVE +F  ++T+IY  ++KK+
Sbjct: 127 LIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKN 186

Query: 185 LAA-GESIDIGVNPALFKGTNIVVPGQDQAAP 216
           LA+ G+S     NP    G  I++PG  Q  P
Sbjct: 187 LASEGDS----NNPGSLAGKKILIPGSGQEIP 214

[Close]

BLAST of Csor.00g187970 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 261.5 bits (667), Expect = 1.3e-69
Identity = 133/207 (64.25%), Postives = 166/207 (80.19%), Query Frame = 0


Query: 9   NQKIDYVFKVVLIGDSAVGKTQLLSRFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQI 68
           + + DY+FKVVLIGDS VGK+ LLSRF+RNEFS++SK+TIGVEF T+++ +D K VKAQI
Sbjct: 7   DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66

Query: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGN 128
           WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+  +F+++ RWL+ELR H D NIVIM +GN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126

Query: 129 KCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFRILTEIYRIISKKSLAAG 188
           K DL  LRAV TEDA+ FAEREN FFMETSALES NVE AF  +L++IYR++S+K+L   
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKAL--- 186

Query: 189 ESIDIGVNP-ALFKGTNIVVPGQDQAA 215
              DIG +P AL KG  I V  +D  +
Sbjct: 187 ---DIGDDPAALPKGQTINVGSKDDVS 207

The following BLAST results are available for this feature:

BLAST of Csor.00g187970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LH50	8.1e-101	86.11	Ras-related protein RABA4d OS=Arabidopsis thaliana OX=3702 GN=RABA4D PE=1 SV=1	[more]
P25766	1.9e-94	81.99	Ras-related protein RGP1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGP1 PE=2 S...	[more]
Q9FE79	7.6e-91	78.67	Ras-related protein RABA4c OS=Arabidopsis thaliana OX=3702 GN=RABA4C PE=2 SV=1	[more]
Q40191	1.9e-86	76.78	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
Q40522	4.1e-84	72.22	Ras-related protein Rab11D OS=Nicotiana tabacum OX=4097 GN=RAB11D PE=2 SV=1	[more]

BLAST of Csor.00g187970 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595661.1	0.0	100.00	Ras-related protein RABA4d, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022966440.1	1.23e-162	99.61	protein POLYCHOME [Cucurbita maxima]	[more]
XP_023518760.1	1.23e-162	99.61	protein POLYCHOME-like [Cucurbita pepo subsp. pepo]	[more]
XP_022925136.1	3.92e-161	99.61	protein POLYCHOME-like [Cucurbita moschata] >KAG7027617.1 Protein POLYCHOME [Cuc...	[more]
THG05194.1	1.64e-160	57.55	hypothetical protein TEA_013639 [Camellia sinensis var. sinensis]	[more]

BLAST of Csor.00g187970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HRM8	5.96e-163	99.61	protein POLYCHOME OS=Cucurbita maxima OX=3661 GN=LOC111466091 PE=4 SV=1	[more]
A0A6J1EBD1	1.90e-161	99.61	protein POLYCHOME-like OS=Cucurbita moschata OX=3662 GN=LOC111432471 PE=4 SV=1	[more]
A0A4S4DR01	7.94e-161	57.55	Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0136...	[more]
A0A6J1EAZ2	1.49e-143	100.00	ras-related protein RABA4d OS=Cucurbita moschata OX=3662 GN=LOC111432472 PE=4 SV...	[more]
A0A6J1HTU8	6.04e-143	99.53	ras-related protein RABA4d OS=Cucurbita maxima OX=3661 GN=LOC111466102 PE=4 SV=1	[more]

BLAST of Csor.00g187970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12160.1	5.8e-102	86.11	RAB GTPase homolog A4D	[more]
AT5G47960.1	5.4e-92	78.67	RAB GTPase homolog A4C	[more]
AT5G65270.1	2.7e-83	73.11	RAB GTPase homolog A4A	[more]
AT4G39990.1	1.1e-79	69.81	RAB GTPase homolog A4B	[more]
AT5G60860.1	1.3e-69	64.25	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 354..374
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 119..132 score: 52.08 coord: 57..79 score: 53.74 coord: 154..176 score: 42.45 coord: 39..55 score: 34.43 coord: 16..37 score: 51.26
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..214 e-value: 5.7E-6 score: 35.2
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 e-value: 0.0021 score: 3.8
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..179 e-value: 2.5E-26 score: 103.5
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..179 e-value: 4.0E-106 score: 368.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 462..482
None	No IPR available	PANTHER	PTHR47978:SF27	BNAA05G26830D PROTEIN	coord: 1..213
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 1..213
None	No IPR available	PROSITE	PS51420	RHO	coord: 9..180 score: 9.306746
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..225 score: 35.791538
None	No IPR available	CDD	cd01868	Rab11_like	coord: 13..177 e-value: 1.85099E-123 score: 354.944
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..176 e-value: 2.4E-11 score: 25.7
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..177 e-value: 2.0E-60 score: 203.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 10..229 score: 17.76276
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..169 e-value: 9.0E-36 score: 121.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 8..193 e-value: 5.9E-69 score: 233.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g187970.m01	Csor.00g187970.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1904667	negative regulation of ubiquitin protein ligase activity
biological_process	GO:0051783	regulation of nuclear division
biological_process	GO:0080092	regulation of pollen tube growth
cellular_component	GO:0045177	apical part of cell
cellular_component	GO:0070382	exocytic vesicle
cellular_component	GO:0005634	nucleus
cellular_component	GO:0090404	pollen tube tip
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019900	kinase binding