Csor.00g186970 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g186970
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	polygalacturonase
Location	Csor_Chr14: 6520280 .. 6523298 (-)
RNA-Seq Expression	Csor.00g186970
Synteny	Csor.00g186970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTTCCCCTGTTTTCTCTCTGTTTTGGCAGTTTCCATGAGTACCCTCTTTTTGTTTCTCAATATCATGATCTAATTTATGGTCATTATCCAAAACCCAGATGGAACACGGGTTTTTACGGCTCGACGACGAGGCAGGATCGAGTAAGCTCGCTTTCGGGTTCGCCAAAGGTCGTGAATGTGGATGATTTTGGAGCTAAGGGAAATGGACAAGATGACAGTAAGGTACACCCCATTGAACAGCCCAAGCTTAAGCTCGTTGCTAACAGATATTGTCCTCTTCGAGCCGTTACGCCTTAGTTTTTGTTTCGTTTGGTTACTCACAGTGTTCATGAATGCATGTTTTAGGCATTTGAGCTAGCTTGGAAGGAGGCTTGTTCTTCTAGTAAGGCAATGATTTTGGTGCCTAAAGGCAGGACATATTATCTTAAGTCAATAACTTTTTCAGGTCCTTGTAGATCTCCTTTAACACTAAAGGTGAGAGTATAAGCATAATTTTCAATATCATATTTTTGGAAAATTTTGTGTTCATTTCATTGTTCTTCTCATTGTTAGATCGATGGAATAATCAAAGCTTCTCCAAGAATGTCGGATTACGACCACGATCGACGACATTGGCTTAAATTCGAAGGTGTCGACAACTTTGTTGTAGAAGGCAATGGTATCATCAATGGAAATGGCAAAAAATGGTGGCAAAACTCTTGCAAAGTGAACAAAGAACTTGTAAATCCATCACTACTTTAAACAACTATGTCTCATATTATCAATATCATTAGCTTATGATTGTTTTTCTCTTGGATTCTTTTGCAGCCTTGCAGGAGAGCACCGACGGTTCGTCGCTATCCTTATGATCTTCGAAAGCGTGTTCGACGTCGTTTAATCGAAAATGTTCATCTGGTTTTTGTATGTGCAGGCTGTAACTTTCTACCAATGCATCAACTTGGTTGTGGCTAACCTGAAACTAGAAAATGCACAACAAATGCATCTGACATTTCAGAAATGCACCAATGTCCAAGCTTTGAATCTTCGGGTGGTTGCCCCGGAGAATAGTCCCAACACGGATGGAATTCACGTCACGGAAACTCAAAATGTTATAATAAAGAACTGTGTCATTGGAACAGGTGAAAAAAAGTTGTCAATTCAAAGAAAATGAAACAAATTCTATACTTTGTTGATGTGATATCCTATGCTAGTTGGGGAGGAGAACGAAACACCATTTATAAAAGTGTGGAAACCTTTCTCTAGCAGACACGTTTTAAAGCCCGAAAGGGAAGGCCAAAAAAGGACAATATCTGCTAGCGGTGGGCCTAGACCTAGGCCGTTATAGTTTACTAAACGGTTGATTTGAAATCGACTTTTTTTTTCTTGTTTTTTCAAAGGGGATGACTGCATTTCTATTGTAAGCGGGTCGAGAAATGTTCGAGCAATGGATATCACTTGTGGGCCAGGACATGGAATTAGGTACTCATTCAGCTGAATTTGAAGCATTTTTGTAGTGTTTAATGATGTTTTTGTCTCATGTTTTGAATGTTTTTGGTTTGGTTTTTTGTTTGCATTTCAGCATTGGAAGCTTAGGAGCTGGAAACTCAGAAGCTGAGGTTTCAAATATAAGAGTAGATAGAGCATTGATATCAGGAACAAGCAATGGGGTGAGAATAAAGACTTGGCAGGTATGTGAAGCCTATCATTTGTATCGTCGTTAGCTTTACGGTTTTAAACCGTGTTTATTAGAAAGAGGTTTCTAAATCCTTATAAGGAATGTTTCTTTTTTCTCTCTAATCGATGTGGGATCTCACAATCCACCCCTGGCCAGCGTCCTCGCTAGTACACTATTCGGTGTTTGGCTTTGATACCATTTATAATAGCCCAAACCTACTGCTAGTAGATATTGTTCGTTTTGTCTCATGATTTTAAAACATGTCTACTGTGAAAAATTTTACGCATCCTTGTAGGATTACCGCCCTAACCCAATAGGAATTGGTGGGCGTGTCCTATGGTGATAACCATTTGCTCCACATGTATCATTAAAAGCAGAGCAATTCTAGCTTTTCCTACCTCCACTTGAACGCTGAGGGTGATTTGAACACCAATGGCTGTTTATTTGGTGTCACTGATGGGTCCATTACTTGTTTAGTGGGTGTAGTTCAATGCTATTTGTCAAAGTTAAAAGCACGTGTTCAAACCAATTAAATAGAGTAAAGAATAACATAACAAAGTTAATTTAGCTGGTGTACGGAGAAAACGAACATATATATTCTATCTAAGATACGTCTTTAATTTTCAAAAGTTTCAATGATATTCTTAAAACTTTTTAAAAAGTTTCAAAATTTATCAGTTTTAGTACTTTGTTTCAAAAATATCCTTGAACTTTTATAAAGTCTCGTTAATATCCATCAAATTTTTTAAAAGTGTTAGTTTATGGAATTTTTTTATTAATAATTAATTTTTATAATTGAAAAGGAGAAATTCCATCCCTTGTATTATATTACACCTAAACTTTCTATTTCGAATATTTTCATTTGGTTGCCTTTCAAATTTTGATAATGAATGGGATATGTGCACAGGGAGGCTCTGGATATGCTAAAAACATCATGTTTCAAAACGTTGTCATGAACAATGTGCGCAATCCAATAATTATAGACCAGAATTACTGTGATAAAGAAGAAAAGTCATGCCCAGAACAGGTAAAAAATTGGGGCCTAAATCTTTGATCTGCTTTGAACTGAACTATATAGATACCTAGAAATCAAAAGCACAGAAGTTATTTGGGTTTTTGTTGCTCTCATGGATGCAGAATTCAGCAGTGAAAGTAAGCAATGTGGTGTACAAGAACATTAGAGGAACAAGTGCTTCTGATGATGCCATAAGATTTGATTGCAGCAAAAGCTCCCCTTGTCAAGACATTTCCATGCTTGGAGTTCATCTAGTTAGACAAGGAGATGATGTTGCCACAGCTTCCTGTGAGAATGTTAGGTTGAAAAATAGATGGAAAGTTTATCCACAGTGCTCCTCATAA

mRNA sequence

ATGTCATTTCCCCTGTTTTCTCTCTGTTTTGGCAGTTTCCATGAGTACCCTCTTTTTGTTTCTCAATATCATGATCTAATTTATGGTCATTATCCAAAACCCAGATGGAACACGGGTTTTTACGGCTCGACGACGAGGCAGGATCGAGTAAGCTCGCTTTCGGGTTCGCCAAAGGTCGTGAATGTGGATGATTTTGGAGCTAAGGGAAATGGACAAGATGACAGTAAGGCATTTGAGCTAGCTTGGAAGGAGGCTTGTTCTTCTAGTAAGGCAATGATTTTGGTGCCTAAAGGCAGGACATATTATCTTAAGTCAATAACTTTTTCAGGTCCTTGTAGATCTCCTTTAACACTAAAGATCGATGGAATAATCAAAGCTTCTCCAAGAATGTCGGATTACGACCACGATCGACGACATTGGCTTAAATTCGAAGGTGTCGACAACTTTGTTGTAGAAGGCAATGGTATCATCAATGGAAATGGCAAAAAATGGTGGCAAAACTCTTGCAAAGTGAACAAAGAACTTCCTTGCAGGAGAGCACCGACGGCTGTAACTTTCTACCAATGCATCAACTTGGTTGTGGCTAACCTGAAACTAGAAAATGCACAACAAATGCATCTGACATTTCAGAAATGCACCAATGTCCAAGCTTTGAATCTTCGGGTGGTTGCCCCGGAGAATAGTCCCAACACGGATGGAATTCACGTCACGGAAACTCAAAATGTTATAATAAAGAACTGTGTCATTGGAACAGGGGATGACTGCATTTCTATTGTAAGCGGGTCGAGAAATGTTCGAGCAATGGATATCACTTGTGGGCCAGGACATGGAATTAGCATTGGAAGCTTAGGAGCTGGAAACTCAGAAGCTGAGGTTTCAAATATAAGAGTAGATAGAGCATTGATATCAGGAACAAGCAATGGGGTGAGAATAAAGACTTGGCAGAATTCAGCAGTGAAAGTAAGCAATGTGGTGTACAAGAACATTAGAGGAACAAGTGCTTCTGATGATGCCATAAGATTTGATTGCAGCAAAAGCTCCCCTTGTCAAGACATTTCCATGCTTGGAGTTCATCTAGTTAGACAAGGAGATGATGTTGCCACAGCTTCCTGTGAGAATGTTAGGTTGAAAAATAGATGGAAAGTTTATCCACAGTGCTCCTCATAA

Coding sequence (CDS)

ATGTCATTTCCCCTGTTTTCTCTCTGTTTTGGCAGTTTCCATGAGTACCCTCTTTTTGTTTCTCAATATCATGATCTAATTTATGGTCATTATCCAAAACCCAGATGGAACACGGGTTTTTACGGCTCGACGACGAGGCAGGATCGAGTAAGCTCGCTTTCGGGTTCGCCAAAGGTCGTGAATGTGGATGATTTTGGAGCTAAGGGAAATGGACAAGATGACAGTAAGGCATTTGAGCTAGCTTGGAAGGAGGCTTGTTCTTCTAGTAAGGCAATGATTTTGGTGCCTAAAGGCAGGACATATTATCTTAAGTCAATAACTTTTTCAGGTCCTTGTAGATCTCCTTTAACACTAAAGATCGATGGAATAATCAAAGCTTCTCCAAGAATGTCGGATTACGACCACGATCGACGACATTGGCTTAAATTCGAAGGTGTCGACAACTTTGTTGTAGAAGGCAATGGTATCATCAATGGAAATGGCAAAAAATGGTGGCAAAACTCTTGCAAAGTGAACAAAGAACTTCCTTGCAGGAGAGCACCGACGGCTGTAACTTTCTACCAATGCATCAACTTGGTTGTGGCTAACCTGAAACTAGAAAATGCACAACAAATGCATCTGACATTTCAGAAATGCACCAATGTCCAAGCTTTGAATCTTCGGGTGGTTGCCCCGGAGAATAGTCCCAACACGGATGGAATTCACGTCACGGAAACTCAAAATGTTATAATAAAGAACTGTGTCATTGGAACAGGGGATGACTGCATTTCTATTGTAAGCGGGTCGAGAAATGTTCGAGCAATGGATATCACTTGTGGGCCAGGACATGGAATTAGCATTGGAAGCTTAGGAGCTGGAAACTCAGAAGCTGAGGTTTCAAATATAAGAGTAGATAGAGCATTGATATCAGGAACAAGCAATGGGGTGAGAATAAAGACTTGGCAGAATTCAGCAGTGAAAGTAAGCAATGTGGTGTACAAGAACATTAGAGGAACAAGTGCTTCTGATGATGCCATAAGATTTGATTGCAGCAAAAGCTCCCCTTGTCAAGACATTTCCATGCTTGGAGTTCATCTAGTTAGACAAGGAGATGATGTTGCCACAGCTTCCTGTGAGAATGTTAGGTTGAAAAATAGATGGAAAGTTTATCCACAGTGCTCCTCATAA

Protein sequence

MSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVVNVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKSITFSGPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHVTETQNVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVDRALISGTSNGVRIKTWQNSAVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLKNRWKVYPQCSS

Homology

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BLAST of Csor.00g186970 vs. ExPASy Swiss-Prot
Match: P35336 (Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 1.4e-114
Identity = 221/414 (53.38%), Postives = 268/414 (64.73%), Query Frame = 0


Query: 13  FHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVVNVDDFGAKGNGQ 72
           F  YP +++   D  +G         G +G       +  +  + K VNVDDFGAKG+G+
Sbjct: 45  FKAYPSYITTIGDNDFG--SSMSHENGIFGLRKVDYGMDRVLDASKTVNVDDFGAKGDGR 104

Query: 73  DDSKAFELAWKEACSS-SKAMILVPKGRTYYLKSITFSGPCRSPLTLKIDGIIKASPRMS 132
           DD+KAFE AWK ACSS S A++LVPK + Y ++ I+FSGPC+S LT++I G I+AS   S
Sbjct: 105 DDTKAFEKAWKAACSSTSSAVLLVPK-KNYLVRPISFSGPCKSGLTMQIYGTIEASDDRS 164

Query: 133 DYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPTAVTFYQCIN 192
           DY  D RHWL F+ V N  VEG G INGNGK WWQNSCK NK LPC+ APTA+TFY+  +
Sbjct: 165 DYRKDGRHWLVFDSVQNLRVEGGGTINGNGKIWWQNSCKTNKALPCKDAPTALTFYKSKH 224

Query: 193 LVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHVTETQNVIIKNCVIGT 252
           ++V NLK+ENAQQ+H++F  C NVQA NL V APENSPNTDGIHVT TQN+ I +CVIGT
Sbjct: 225 VIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGT 284

Query: 253 GDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVDRALISGTSNGVRI 312
           GDDCISIV+GSR VR  DITCGPGHGISIGSLG GNSEA VS++ V+ A + GT+NGVRI
Sbjct: 285 GDDCISIVNGSRKVRVNDITCGPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRI 344

Query: 313 KTW---------------------------------------QNSAVKVSNVVYKNIRGT 372
           KTW                                       Q+SAV+V NVVY+NI+GT
Sbjct: 345 KTWQGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIKGT 404

Query: 373 SASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLKNRWKVYPQC 387
            AS+ AI FDCSK  PCQ I +  V L  +G   A A C NV L     V P C
Sbjct: 405 CASNVAITFDCSKRFPCQGIVLEDVDLEIEGGAAAKALCNNVELSETGVVSPHC 455

[Close]

BLAST of Csor.00g186970 vs. ExPASy Swiss-Prot
Match: Q9SFB7 (Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2)

HSP 1 Score: 391.7 bits (1005), Expect = 9.4e-108
Identity = 220/431 (51.04%), Postives = 274/431 (63.57%), Query Frame = 0


Query: 9   CFGSF---HEYPLFVSQ--YHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSG-----SPK 68
           CF S+   H   LF+S   Y++    H          +G  TR   + +  G     SP+
Sbjct: 19  CFSSYPFNHRDDLFMSSNVYYETNRQHQ---------HGHNTRNSHLKNRHGYAPRSSPR 78

Query: 69  VVNVDDFGAKGNGQDDSKAFELAWKEACSSSKAM-ILVPKGRTYYLKSITFSGPCRSPLT 128
             NV+ FGAK NG DDSKAF  AW+ ACSS+  + I+ PK R Y LK++TFSGPC+S L 
Sbjct: 79  SFNVNTFGAKANGNDDSKAFMKAWEAACSSTGIVYIVAPKNRDYMLKAVTFSGPCKSSLI 138

Query: 129 L-KIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELP 188
           + KI G I+A    SDY  +RRHW+ FE V+N  VEG G I+GNG  WW  SCK+N +LP
Sbjct: 139 IFKIYGRIEAWENPSDY-KERRHWIVFENVNNLRVEGGGRIDGNGHIWWPKSCKINPQLP 198

Query: 189 CRRAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHV 248
           C  APTAVTF +C NL V+N++LENAQQMHLTFQ C NV+ALNL V +P +SPNTDGIHV
Sbjct: 199 CLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHV 258

Query: 249 TETQNVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIR 308
           + TQN++I++ ++ TGDDCISIVSGS NVRA  ITCGPGHGISIGSLG  NSEA VSN+ 
Sbjct: 259 SGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSNVV 318

Query: 309 VDRALISGTSNGVRIKTW---------------------------------------QNS 368
           V++A + GT+NGVRIKTW                                       Q S
Sbjct: 319 VNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKS 378

Query: 369 AVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQ-GDDVATASCENVRL 388
           AV+VSNV+YKNI+GTS+   A++F CSK+ PC+ ISM  V LV Q   DV+ ASC NV+L
Sbjct: 379 AVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDVSKASCSNVKL 438

[Close]

BLAST of Csor.00g186970 vs. ExPASy Swiss-Prot
Match: P05117 (Polygalacturonase-2 OS=Solanum lycopersicum OX=4081 GN=PG2 PE=1 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 6.3e-104
Identity = 197/372 (52.96%), Postives = 248/372 (66.67%), Query Frame = 0


Query: 58  KVVNVDDFGAKGNGQD-DSKAFELAWKEACSS-SKAMILVPKGRTYYLKSITFSGPCRSP 117
           KV+NV  FGAKG+G+  D+ AFE AW EACSS +    +VPK + Y LK ITFSGPCRS 
Sbjct: 74  KVINVLSFGAKGDGKTYDNIAFEQAWNEACSSRTPVQFVVPKNKNYLLKQITFSGPCRSS 133

Query: 118 LTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKEL 177
           +++KI G ++AS ++SDY  DRR W+ F+ V N VV G G INGNG+ WW +SCK+NK L
Sbjct: 134 ISVKIFGSLEASSKISDY-KDRRLWIAFDSVQNLVVGGGGTINGNGQVWWPSSCKINKSL 193

Query: 178 PCRRAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH 237
           PCR APTA+TF+ C NL V NLK +NAQQ+H+ F+ CTNV A NL + A   SPNTDG+H
Sbjct: 194 PCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVH 253

Query: 238 VTETQNVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNI 297
           V+ TQ + I + +IGTGDDCISIVSGS+NV+A +ITCGPGHGISIGSLG+GNSEA VSN+
Sbjct: 254 VSNTQYIQISDTIIGTGDDCISIVSGSQNVQATNITCGPGHGISIGSLGSGNSEAYVSNV 313

Query: 298 RVDRALISGTSNGVRIKTWQN--------------------------------------- 357
            V+ A I G  NGVRIKTWQ                                        
Sbjct: 314 TVNEAKIIGAENGVRIKTWQGGSGQASNIKFLNVEMQDVKYPIIIDQNYCDRVEPCIQQF 373

Query: 358 SAVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRL 389
           SAV+V NVVY+NI+GTSA+  AI+FDCS + PC+ I M  ++LV +    + A+C+NV  
Sbjct: 374 SAVQVKNVVYENIKGTSATKVAIKFDCSTNFPCEGIIMENINLVGESGKPSEATCKNVHF 433

[Close]

BLAST of Csor.00g186970 vs. ExPASy Swiss-Prot
Match: Q02096 (Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.7e-101
Identity = 193/380 (50.79%), Postives = 249/380 (65.53%), Query Frame = 0


Query: 39  GFYGSTTRQDRVSSLSG---SPKV-VNVDDFGAKGNGQDDSKAFELAWKEACSSSKAMIL 98
           GF  S    +R + + G   SP   ++VDDFGA+G+G DD+KAFE AWK+ACSS  ++++
Sbjct: 60  GFEPSILSLERFNPVGGPETSPDTDISVDDFGARGDGTDDTKAFEKAWKDACSSG-SVLI 119

Query: 99  VPKGRTYYLKSITFSGPCRSPLTLKIDGIIKASPRMSDY-DHDRRHWLKFEGVDNFVVEG 158
           VP+ + Y LK ITFSGPC+S L +KI G I+AS   SD+  H+R+ W++FE + N  +EG
Sbjct: 120 VPENKNYLLKQITFSGPCKSDLRVKIRGTIEASSDQSDWVGHNRKRWIEFEDISNLTLEG 179

Query: 159 NGIINGNGKKWWQNSCKVNKELPCRRAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCT 218
            G  NGNG+ WW +SCK  K LPC+ APTA+TF  C NL+V++L ++++Q+MHL+F KC 
Sbjct: 180 GGTSNGNGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQ 239

Query: 219 NVQALNLRVVAPENSPNTDGIHVTETQNVIIKNCVIGTGDDCISIVSGSRNVRAMDITCG 278
           +V A NL V APE+SPNTDGIH+T TQ + + N VIGTGDDCISI SGS+ V A +ITCG
Sbjct: 240 DVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESGSKMVIATNITCG 299

Query: 279 PGHGISIGSLGAGNSEAEVSNIRVDRALISGTSNGVRIKTW------------------- 338
           PGHGISIGSLG  NSEA VS + VD   +  T+NG+RIKTW                   
Sbjct: 300 PGHGISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMHN 359

Query: 339 --------------------QNSAVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISM 375
                               Q SAVKVSNV Y NIRGTSAS+ A++FDCSKSSPCQ   +
Sbjct: 360 VTNPIIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDCSKSSPCQGYIV 419

[Close]

BLAST of Csor.00g186970 vs. ExPASy Swiss-Prot
Match: P48978 (Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 2.1e-99
Identity = 198/378 (52.38%), Postives = 241/378 (63.76%), Query Frame = 0


Query: 50  VSSLSGSPKVVNVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKSITFS 109
           +++ S   K ++VDDFGAKGNG DD++AF  AWK ACSSS AM+LV   + Y ++ I FS
Sbjct: 89  IATSSAPAKTISVDDFGAKGNGADDTQAFVKAWKAACSSSGAMVLVVPQKNYLVRPIEFS 148

Query: 110 GPCRSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSC 169
           GPC+S LTL+I G I+AS   S Y  D  HWL F+ V N +V G G INGNG  WW+NSC
Sbjct: 149 GPCKSQLTLQIYGTIEASEDRSIY-KDIDHWLIFDNVQNLLVVGPGTINGNGNIWWKNSC 208

Query: 170 KVNKELPC-RRAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENS 229
           K+  + PC   APTAVTF +C NLVV NL +++AQQ+H+ FQ C NVQA  L V APE+S
Sbjct: 209 KIKPQPPCGTYAPTAVTFNRCNNLVVKNLNIQDAQQIHVIFQNCINVQASCLTVTAPEDS 268

Query: 230 PNTDGIHVTETQNVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNS 289
           PNTDGIHVT TQN+ I + VIGTGDDCISIVSGS+ V+A DITCGPGHGISIGSLG   S
Sbjct: 269 PNTDGIHVTNTQNITISSSVIGTGDDCISIVSGSQRVQATDITCGPGHGISIGSLGEDGS 328

Query: 290 EAEVSNIRVDRALISGTSNGVRIKTW---------------------------------- 349
           E  VS + V+ A +SGTSNG+RIKTW                                  
Sbjct: 329 EDHVSGVFVNGAKLSGTSNGLRIKTWKGGSGSATNIVFQNVQMNDVTNPIIIDQNYCDHK 388

Query: 350 ------QNSAVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVAT 387
                 Q SAV+V NV+Y+NIRGTSAS DAI  +CS+S PCQ I +  V L         
Sbjct: 389 TKDCKQQKSAVQVKNVLYQNIRGTSASGDAITLNCSQSVPCQGIVLQSVQLQN-----GR 448

[Close]

BLAST of Csor.00g186970 vs. NCBI nr
Match: KAG6581572.1 (hypothetical protein SDJN03_21574, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 801 bits (2070), Expect = 3.89e-293
Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0


Query: 1   MSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVV 60
           MSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVV
Sbjct: 1   MSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVV 60

Query: 61  NVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKSITFSGPCRSPLTLKI 120
           NVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKSITFSGPCRSPLTLKI
Sbjct: 61  NVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKSITFSGPCRSPLTLKI 120

Query: 121 DGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRA 180
           DGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRA
Sbjct: 121 DGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRA 180

Query: 181 PTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHVTETQ 240
           PTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHVTETQ
Sbjct: 181 PTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHVTETQ 240

Query: 241 NVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVDRA 300
           NVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVDRA
Sbjct: 241 NVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVDRA 300

Query: 301 LISGTSNGVRIKTWQNSAVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLV 360
           LISGTSNGVRIKTWQNSAVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLV
Sbjct: 301 LISGTSNGVRIKTWQNSAVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLV 360

Query: 361 RQGDDVATASCENVRLKNRWKVYPQCSS 388
           RQGDDVATASCENVRLKNRWKVYPQCSS
Sbjct: 361 RQGDDVATASCENVRLKNRWKVYPQCSS 388

[Close]

BLAST of Csor.00g186970 vs. NCBI nr
Match: XP_022934263.1 (polygalacturonase [Cucurbita moschata])

HSP 1 Score: 762 bits (1968), Expect = 9.40e-277
Identity = 379/428 (88.55%), Postives = 383/428 (89.49%), Query Frame = 0


Query: 1   MSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVV 60
           MSFPLFSLCFGSFHEYPL VSQYHD IYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVV
Sbjct: 12  MSFPLFSLCFGSFHEYPLPVSQYHDQIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVV 71

Query: 61  NVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKSITFSGPCRSPLTLKI 120
           NVDDFGAKGNGQDDSKAFELAWK+ACSSSKAMILVPKGRTYYLK ITFSGPCRSPLTLKI
Sbjct: 72  NVDDFGAKGNGQDDSKAFELAWKKACSSSKAMILVPKGRTYYLKPITFSGPCRSPLTLKI 131

Query: 121 DGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRA 180
           DG+IKASPRMSDYD DRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCR A
Sbjct: 132 DGMIKASPRMSDYDDDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRGA 191

Query: 181 PTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHVTETQ 240
           PTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNV+ALNLRVVAPENSPNTDGIHVTETQ
Sbjct: 192 PTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVKALNLRVVAPENSPNTDGIHVTETQ 251

Query: 241 NVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVDRA 300
           NVII+NCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVDRA
Sbjct: 252 NVIIRNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVDRA 311

Query: 301 LISGTSNGVRIKTWQ----------------------------------------NSAVK 360
           LISGTSNGVRIKTWQ                                        NSAVK
Sbjct: 312 LISGTSNGVRIKTWQGGSGYAKNIMFQNVVMNNVRNPIIIDQNYCDKEEKSCPQQNSAVK 371

Query: 361 VSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLKNRW 388
           VSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLKNRW
Sbjct: 372 VSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLKNRW 431

[Close]

BLAST of Csor.00g186970 vs. NCBI nr
Match: XP_023521323.1 (polygalacturonase-like [Cucurbita pepo subsp. pepo] >XP_023528797.1 polygalacturonase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 756 bits (1953), Expect = 1.81e-274
Identity = 377/428 (88.08%), Postives = 380/428 (88.79%), Query Frame = 0


Query: 1   MSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVV 60
           MSFPLFSLCFGSFH YPL VSQYHD IYGHYPKPRWNTGFYGS TRQDRVSSLSGSPK+V
Sbjct: 12  MSFPLFSLCFGSFHVYPLPVSQYHDQIYGHYPKPRWNTGFYGSMTRQDRVSSLSGSPKIV 71

Query: 61  NVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKSITFSGPCRSPLTLKI 120
           NV DFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLK ITFSGPCRSPLTLKI
Sbjct: 72  NVVDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKPITFSGPCRSPLTLKI 131

Query: 121 DGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRA 180
           DG+IKASPRMSDYD DRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCR A
Sbjct: 132 DGMIKASPRMSDYDDDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRGA 191

Query: 181 PTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHVTETQ 240
           PTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHVTETQ
Sbjct: 192 PTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHVTETQ 251

Query: 241 NVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVDRA 300
           NVII+NCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVDRA
Sbjct: 252 NVIIRNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVDRA 311

Query: 301 LISGTSNGVRIKTWQ----------------------------------------NSAVK 360
           LISGTSNGVRIKTWQ                                        NSAVK
Sbjct: 312 LISGTSNGVRIKTWQGGSGYAKNIMFQNVVMNNVSNPIIIDQNYCDKEEKSCPQQNSAVK 371

Query: 361 VSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLKNRW 388
           VSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLKNRW
Sbjct: 372 VSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLKNRW 431

[Close]

BLAST of Csor.00g186970 vs. NCBI nr
Match: XP_022982564.1 (polygalacturonase [Cucurbita maxima])

HSP 1 Score: 749 bits (1934), Expect = 1.59e-271
Identity = 374/431 (86.77%), Postives = 382/431 (88.63%), Query Frame = 0


Query: 1   MSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGST----TRQDRVSSLSGS 60
           +SFPLFSLCFGSFHEYPL VSQYHD IYGHYPKPRWNTGFYGST    TRQ+RVSSLSGS
Sbjct: 12  ISFPLFSLCFGSFHEYPLPVSQYHDHIYGHYPKPRWNTGFYGSTMTTTTRQNRVSSLSGS 71

Query: 61  PKVVNVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKSITFSGPCRSPL 120
           PK+VNVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLK ITFSGPC SPL
Sbjct: 72  PKIVNVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKPITFSGPCSSPL 131

Query: 121 TLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELP 180
           TLKIDG+IKASPRMSDYD DRRHWLKFEGVDNFVVEGNGIINGNG+KWWQNSCKVNKELP
Sbjct: 132 TLKIDGMIKASPRMSDYDDDRRHWLKFEGVDNFVVEGNGIINGNGRKWWQNSCKVNKELP 191

Query: 181 CRRAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHV 240
           CR APTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNV+ALNLRVVAPENSPNTDGIHV
Sbjct: 192 CRGAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVKALNLRVVAPENSPNTDGIHV 251

Query: 241 TETQNVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIR 300
           TETQNVII+NCVIGTGDDCISIVSGSRNVRA+DITCGPGHGISIGSLGAGNSEAEVSNIR
Sbjct: 252 TETQNVIIRNCVIGTGDDCISIVSGSRNVRAVDITCGPGHGISIGSLGAGNSEAEVSNIR 311

Query: 301 VDRALISGTSNGVRIKTWQ---------------------------------------NS 360
           VDRALISGTSNGVRIKTWQ                                       NS
Sbjct: 312 VDRALISGTSNGVRIKTWQGGSGYAKNIMFQNVVMNNVRNPIIIDQNYCDKEESCPEQNS 371

Query: 361 AVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLK 388
           AVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLK
Sbjct: 372 AVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLK 431

[Close]

BLAST of Csor.00g186970 vs. NCBI nr
Match: XP_038905664.1 (polygalacturonase-like [Benincasa hispida])

HSP 1 Score: 667 bits (1720), Expect = 5.03e-239
Identity = 334/427 (78.22%), Postives = 359/427 (84.07%), Query Frame = 0


Query: 1   MSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRV--SSLSGSPK 60
           ++F LFSLCFG++ E PL VSQYHD I+ HYP  RWNT F+   T + R   SSLSGS K
Sbjct: 12  IAFSLFSLCFGNYLEDPLPVSQYHDQIFSHYP--RWNTDFHSLMTTKTRYRGSSLSGSTK 71

Query: 61  VVNVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKSITFSGPCRSPLTL 120
           VVNVDDFGAKGNG DDSKAFELAW+EACSS KA +LVPKGRTYYLK ITFSGPCRSPLTL
Sbjct: 72  VVNVDDFGAKGNGGDDSKAFELAWREACSSRKATLLVPKGRTYYLKPITFSGPCRSPLTL 131

Query: 121 KIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCR 180
           KI+G+IKASPRMSDYD+DRRHWLKFEGVDNFVVEGNGII+GNG+KWWQNSCKVNKELPCR
Sbjct: 132 KINGMIKASPRMSDYDNDRRHWLKFEGVDNFVVEGNGIIDGNGRKWWQNSCKVNKELPCR 191

Query: 181 RAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHVTE 240
           RAPTAVTFYQCINLVV NL  +NAQQMHLTFQKCTNV+ALNLRVVAP NSPNTDGIH+TE
Sbjct: 192 RAPTAVTFYQCINLVVTNLMFKNAQQMHLTFQKCTNVKALNLRVVAPGNSPNTDGIHITE 251

Query: 241 TQNVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVD 300
           TQN II+NCVIGTGDDCISIVSGSRNV+AMDITCGPGHGISIGSLGAGNSEAEVSNIRV+
Sbjct: 252 TQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGAGNSEAEVSNIRVN 311

Query: 301 RALISGTSNGVRIKTWQ---------------------------------------NSAV 360
           RALISGTSNGVRIKTWQ                                       NSAV
Sbjct: 312 RALISGTSNGVRIKTWQGGSGYAKNIMFQNVVMKNVSNPIIIDQNYCDKKESCPEQNSAV 371

Query: 361 KVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLKNR 386
           KVSNVVYKNIRGTSASDDAI+FDCSKS PCQ+IS+LGVH+V QGD+VATASCENVRLKNR
Sbjct: 372 KVSNVVYKNIRGTSASDDAIKFDCSKSFPCQEISLLGVHIVGQGDEVATASCENVRLKNR 431

[Close]

BLAST of Csor.00g186970 vs. ExPASy TrEMBL
Match: A0A6J1F768 (polygalacturonase OS=Cucurbita moschata OX=3662 GN=LOC111441479 PE=3 SV=1)

HSP 1 Score: 762 bits (1968), Expect = 4.55e-277
Identity = 379/428 (88.55%), Postives = 383/428 (89.49%), Query Frame = 0


Query: 1   MSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVV 60
           MSFPLFSLCFGSFHEYPL VSQYHD IYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVV
Sbjct: 12  MSFPLFSLCFGSFHEYPLPVSQYHDQIYGHYPKPRWNTGFYGSTTRQDRVSSLSGSPKVV 71

Query: 61  NVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKSITFSGPCRSPLTLKI 120
           NVDDFGAKGNGQDDSKAFELAWK+ACSSSKAMILVPKGRTYYLK ITFSGPCRSPLTLKI
Sbjct: 72  NVDDFGAKGNGQDDSKAFELAWKKACSSSKAMILVPKGRTYYLKPITFSGPCRSPLTLKI 131

Query: 121 DGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRA 180
           DG+IKASPRMSDYD DRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCR A
Sbjct: 132 DGMIKASPRMSDYDDDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRGA 191

Query: 181 PTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHVTETQ 240
           PTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNV+ALNLRVVAPENSPNTDGIHVTETQ
Sbjct: 192 PTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVKALNLRVVAPENSPNTDGIHVTETQ 251

Query: 241 NVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVDRA 300
           NVII+NCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVDRA
Sbjct: 252 NVIIRNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVDRA 311

Query: 301 LISGTSNGVRIKTWQ----------------------------------------NSAVK 360
           LISGTSNGVRIKTWQ                                        NSAVK
Sbjct: 312 LISGTSNGVRIKTWQGGSGYAKNIMFQNVVMNNVRNPIIIDQNYCDKEEKSCPQQNSAVK 371

Query: 361 VSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLKNRW 388
           VSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLKNRW
Sbjct: 372 VSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLKNRW 431

[Close]

BLAST of Csor.00g186970 vs. ExPASy TrEMBL
Match: A0A6J1J4X9 (polygalacturonase OS=Cucurbita maxima OX=3661 GN=LOC111481403 PE=3 SV=1)

HSP 1 Score: 749 bits (1934), Expect = 7.72e-272
Identity = 374/431 (86.77%), Postives = 382/431 (88.63%), Query Frame = 0


Query: 1   MSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRWNTGFYGST----TRQDRVSSLSGS 60
           +SFPLFSLCFGSFHEYPL VSQYHD IYGHYPKPRWNTGFYGST    TRQ+RVSSLSGS
Sbjct: 12  ISFPLFSLCFGSFHEYPLPVSQYHDHIYGHYPKPRWNTGFYGSTMTTTTRQNRVSSLSGS 71

Query: 61  PKVVNVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKSITFSGPCRSPL 120
           PK+VNVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLK ITFSGPC SPL
Sbjct: 72  PKIVNVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKPITFSGPCSSPL 131

Query: 121 TLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELP 180
           TLKIDG+IKASPRMSDYD DRRHWLKFEGVDNFVVEGNGIINGNG+KWWQNSCKVNKELP
Sbjct: 132 TLKIDGMIKASPRMSDYDDDRRHWLKFEGVDNFVVEGNGIINGNGRKWWQNSCKVNKELP 191

Query: 181 CRRAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHV 240
           CR APTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNV+ALNLRVVAPENSPNTDGIHV
Sbjct: 192 CRGAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVKALNLRVVAPENSPNTDGIHV 251

Query: 241 TETQNVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIR 300
           TETQNVII+NCVIGTGDDCISIVSGSRNVRA+DITCGPGHGISIGSLGAGNSEAEVSNIR
Sbjct: 252 TETQNVIIRNCVIGTGDDCISIVSGSRNVRAVDITCGPGHGISIGSLGAGNSEAEVSNIR 311

Query: 301 VDRALISGTSNGVRIKTWQ---------------------------------------NS 360
           VDRALISGTSNGVRIKTWQ                                       NS
Sbjct: 312 VDRALISGTSNGVRIKTWQGGSGYAKNIMFQNVVMNNVRNPIIIDQNYCDKEESCPEQNS 371

Query: 361 AVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLK 388
           AVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLK
Sbjct: 372 AVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLK 431

[Close]

BLAST of Csor.00g186970 vs. ExPASy TrEMBL
Match: A0A1S3CG06 (polygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103500316 PE=3 SV=1)

HSP 1 Score: 656 bits (1692), Expect = 6.44e-235
Identity = 331/433 (76.44%), Postives = 358/433 (82.68%), Query Frame = 0


Query: 1   MSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYPKPRW-----NTGFYGSTT---RQDRVSS 60
           ++F LFSLCFGS+ E P  VSQYHD IY HYP P       NT F+ S T   R+DR SS
Sbjct: 14  IAFSLFSLCFGSYLEDPFPVSQYHDQIYNHYPTPASLYTFRNTDFHSSKTTKKRRDRGSS 73

Query: 61  LSGSPKVVNVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKSITFSGPC 120
            S S KVVNVDDFGAKGNGQDD+KAFELAWKEACSS KA +LVPKGRTYYLK ITFSGPC
Sbjct: 74  FSSSTKVVNVDDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYYLKPITFSGPC 133

Query: 121 RSPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVN 180
           RSPLTLKI+G+IKAS R+SDY++DRRHWLKFEGVDNFVVEGNGIINGNG+KWWQNSCKVN
Sbjct: 134 RSPLTLKINGMIKASTRISDYENDRRHWLKFEGVDNFVVEGNGIINGNGRKWWQNSCKVN 193

Query: 181 KELPCRRAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTD 240
           KELPC+RAPTAVTFYQCINLVV+NL  ++AQQMHLTFQKCTNV+ALNLRVVAP NSPNTD
Sbjct: 194 KELPCKRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTNVKALNLRVVAPGNSPNTD 253

Query: 241 GIHVTETQNVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEV 300
           GIH+TETQN II+NCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGA NSEAEV
Sbjct: 254 GIHITETQNAIIRNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAENSEAEV 313

Query: 301 SNIRVDRALISGTSNGVRIKTWQ------------------------------------- 360
           SNIRV+RALISGTSNGVRIKTWQ                                     
Sbjct: 314 SNIRVNRALISGTSNGVRIKTWQGGSGYAKNIMFQNVVMKNVSNPIIIDQNYCDKEDSCP 373

Query: 361 --NSAVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCEN 386
             NSAVKVSNVVYKNIRGTSASDDAI+FDCSKS PCQ+IS+LGVH+V QG++VATASCEN
Sbjct: 374 EQNSAVKVSNVVYKNIRGTSASDDAIKFDCSKSFPCQEISLLGVHIVGQGNEVATASCEN 433

[Close]

BLAST of Csor.00g186970 vs. ExPASy TrEMBL
Match: A0A6J1DF97 (polygalacturonase-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020284 PE=3 SV=1)

HSP 1 Score: 640 bits (1652), Expect = 6.58e-229
Identity = 322/430 (74.88%), Postives = 358/430 (83.26%), Query Frame = 0


Query: 1   MSFPLFSLCFGSFHEYPLFVSQYHDLIYGHYP-KPRWNTGFYG-STTRQDRVSSLSGSPK 60
           ++FP+FSLCFG+ HE PL VSQYHD +YG    +P W+T F+G  TTR+DR SS SGSPK
Sbjct: 12  IAFPMFSLCFGTHHEDPLPVSQYHDQVYGFRSFRPGWSTDFHGLMTTRRDRGSSRSGSPK 71

Query: 61  VVNVDDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKSITFSGPCRSPLTL 120
           VVNVDDFGAKGNGQDDSKAFELAWKEACSSSKA++LVPKGRTYYLK ITFSGPCRSPLTL
Sbjct: 72  VVNVDDFGAKGNGQDDSKAFELAWKEACSSSKAILLVPKGRTYYLKPITFSGPCRSPLTL 131

Query: 121 KIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNG--IINGNGKKWWQNSCKVNKELP 180
           KI+G+IKASPR+SDY ++RRHWLKFEGV NFVVEGNG  IINGNG+KWW +SCKVNK LP
Sbjct: 132 KINGMIKASPRLSDYVNNRRHWLKFEGVSNFVVEGNGDGIINGNGRKWWLSSCKVNKFLP 191

Query: 181 CRRAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHV 240
           CR APTAVTFYQC NLVVANL  +NAQ+MHL+FQKC NV+ALNLRVVAP NSPNTDGIHV
Sbjct: 192 CREAPTAVTFYQCTNLVVANLMFKNAQKMHLSFQKCINVKALNLRVVAPGNSPNTDGIHV 251

Query: 241 TETQNVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIR 300
           TETQ+V+I+NCVIGTGDDCISIVSGSRNV+AMDI+CGPGHGISIGSLG GN+EAEVSNIR
Sbjct: 252 TETQDVMIRNCVIGTGDDCISIVSGSRNVQAMDISCGPGHGISIGSLGKGNTEAEVSNIR 311

Query: 301 VDRALISGTSNGVRIKTWQN---------------------------------------S 360
           V+RA+ISGTSNGVRIKTWQ                                        S
Sbjct: 312 VNRAMISGTSNGVRIKTWQGGSGYAKNILFQNVVMKNVSNPIIIDQNYCDKEGECPEQVS 371

Query: 361 AVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLK 387
           AVKVSNV+Y+NIRGTSAS+DAI+FDCSKS PCQ IS+LGVHLV QGD V+TASCENVRLK
Sbjct: 372 AVKVSNVMYRNIRGTSASEDAIKFDCSKSFPCQGISLLGVHLVGQGDQVSTASCENVRLK 431

[Close]

BLAST of Csor.00g186970 vs. ExPASy TrEMBL
Match: A0A5D3BPX8 (Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00020 PE=3 SV=1)

HSP 1 Score: 623 bits (1607), Expect = 3.04e-221
Identity = 322/462 (69.70%), Postives = 348/462 (75.32%), Query Frame = 0


Query: 11  GSFHEYPLFVSQYHDLIYGHYPKPRW-----NTGFYGSTT---RQDRVSSLSGSPKVVNV 70
            ++ E P  VSQYHD IY HYP P       NT F+ S T   R+DR SS S S KVVNV
Sbjct: 32  NNYLEDPFPVSQYHDQIYNHYPTPASLYTFRNTDFHSSKTTKKRRDRGSSFSSSTKVVNV 91

Query: 71  DDFGAKGNGQDDSKAFELAWKEACSSSKAMILVPKGRTYYLKSITFSGPCRSPLTLKIDG 130
           DDFGAKGNGQDD+KAFELAWKEACSS KA +LVPKGRTYYLK ITFSGPCRSPLTLKI+G
Sbjct: 92  DDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYYLKPITFSGPCRSPLTLKING 151

Query: 131 IIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELPCRRAPT 190
           +IKAS R+SDY++DRRHWLKFEGVDNFVVEGNGIINGNG+KWWQNSCKVNKELPC+RAPT
Sbjct: 152 MIKASTRISDYENDRRHWLKFEGVDNFVVEGNGIINGNGRKWWQNSCKVNKELPCKRAPT 211

Query: 191 AVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHVTETQNV 250
           AVTFYQCINLVV+NL  ++AQQMHLTFQKCTNV+ALNLRVVAP NSPNTDGIH+TETQN 
Sbjct: 212 AVTFYQCINLVVSNLMFKDAQQMHLTFQKCTNVKALNLRVVAPGNSPNTDGIHITETQNA 271

Query: 251 IIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIRVDRALI 310
           II+NCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGA NSEAEVSNIRV+RALI
Sbjct: 272 IIRNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAENSEAEVSNIRVNRALI 331

Query: 311 SGTSNGVRIKTWQ----------------------------------------------- 370
           SGTSNGVRIKTWQ                                               
Sbjct: 332 SGTSNGVRIKTWQLNSQYLTEKSWPHFQTAVDPLNFNPTIPTPPPANLHDLHGGSGYAKN 391

Query: 371 -------------------------------NSAVKVSNVVYKNIRGTSASDDAIRFDCS 386
                                          NSAVKVSNVVYKNIRGTSASDDAI+FDCS
Sbjct: 392 IMFQNVVMKNVSNPIIIDQNYCDKEDSCPEQNSAVKVSNVVYKNIRGTSASDDAIKFDCS 451

[Close]

BLAST of Csor.00g186970 vs. TAIR 10
Match: AT3G07970.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 391.7 bits (1005), Expect = 6.7e-109
Identity = 220/431 (51.04%), Postives = 274/431 (63.57%), Query Frame = 0


Query: 9   CFGSF---HEYPLFVSQ--YHDLIYGHYPKPRWNTGFYGSTTRQDRVSSLSG-----SPK 68
           CF S+   H   LF+S   Y++    H          +G  TR   + +  G     SP+
Sbjct: 19  CFSSYPFNHRDDLFMSSNVYYETNRQHQ---------HGHNTRNSHLKNRHGYAPRSSPR 78

Query: 69  VVNVDDFGAKGNGQDDSKAFELAWKEACSSSKAM-ILVPKGRTYYLKSITFSGPCRSPLT 128
             NV+ FGAK NG DDSKAF  AW+ ACSS+  + I+ PK R Y LK++TFSGPC+S L 
Sbjct: 79  SFNVNTFGAKANGNDDSKAFMKAWEAACSSTGIVYIVAPKNRDYMLKAVTFSGPCKSSLI 138

Query: 129 L-KIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSCKVNKELP 188
           + KI G I+A    SDY  +RRHW+ FE V+N  VEG G I+GNG  WW  SCK+N +LP
Sbjct: 139 IFKIYGRIEAWENPSDY-KERRHWIVFENVNNLRVEGGGRIDGNGHIWWPKSCKINPQLP 198

Query: 189 CRRAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIHV 248
           C  APTAVTF +C NL V+N++LENAQQMHLTFQ C NV+ALNL V +P +SPNTDGIHV
Sbjct: 199 CLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHV 258

Query: 249 TETQNVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNIR 308
           + TQN++I++ ++ TGDDCISIVSGS NVRA  ITCGPGHGISIGSLG  NSEA VSN+ 
Sbjct: 259 SGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSNVV 318

Query: 309 VDRALISGTSNGVRIKTW---------------------------------------QNS 368
           V++A + GT+NGVRIKTW                                       Q S
Sbjct: 319 VNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKS 378

Query: 369 AVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQ-GDDVATASCENVRL 388
           AV+VSNV+YKNI+GTS+   A++F CSK+ PC+ ISM  V LV Q   DV+ ASC NV+L
Sbjct: 379 AVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDVSKASCSNVKL 438

[Close]

BLAST of Csor.00g186970 vs. TAIR 10
Match: AT2G41850.1 (polygalacturonase abscission zone A. thaliana )

HSP 1 Score: 357.5 bits (916), Expect = 1.4e-98
Identity = 190/375 (50.67%), Postives = 248/375 (66.13%), Query Frame = 0


Query: 56  SPKVVNVDDFGAKGNGQ-DDSKAFELAWKEACSSSKAM-ILVPKGRTYYLKSITFSGPCR 115
           +P  V+V DFGAKG+G+ DD++AF  AWK+ACSS+ A+ +LVPKG TY LKSI  +GPC 
Sbjct: 64  TPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQLTGPCN 123

Query: 116 SPLTLKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEG--NGIINGNGKKWWQNSCKV 175
           S LT++I G + AS + SDY  D   W+ F+GV+N  V+G   G+++GNG+ WWQNSCK 
Sbjct: 124 SILTVQIFGTLSASQKRSDY-KDISKWIMFDGVNNLSVDGGDTGVVDGNGETWWQNSCKR 183

Query: 176 NKELPCRRAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNT 235
           NK  PC +APTA+TFY   +L+V NLK+ NAQQ+ ++ +KC+NVQ  N+ V AP +SPNT
Sbjct: 184 NKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNT 243

Query: 236 DGIHVTETQNVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAE 295
           DGIH+T TQN+ +   +IGTGDDCISI SGS+NV+  DITCGPGHGISIGSLG  NS+A 
Sbjct: 244 DGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGDDNSKAF 303

Query: 296 VSNIRVDRALISGTSNGVRIKTWQ------------------------------------ 355
           VS + VD A +SGT NGVRIKT+Q                                    
Sbjct: 304 VSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDKSKCT 363

Query: 356 --NSAVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCEN 389
              SAV+V NVVY++I GTSAS++AI F+CSK+ PCQ     G+ L R       A+C N
Sbjct: 364 TEKSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQ-----GIVLDRVNIKGGKATCTN 423

[Close]

BLAST of Csor.00g186970 vs. TAIR 10
Match: AT3G57510.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 340.5 bits (872), Expect = 1.8e-93
Identity = 181/370 (48.92%), Postives = 236/370 (63.78%), Query Frame = 0


Query: 60  VNVDDFGAKGNGQ-DDSKAFELAWKEACSSS-KAMILVPKGRTYYLKSITFSGPCRSPLT 119
           V+V +FGAKG+G+ DD++AF+ AWK+ACS++     LVPKG+TY LKS  F GPC+S   
Sbjct: 68  VSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLVPKGKTYLLKSTRFRGPCKSLRN 127

Query: 120 LKIDGIIKASPRMSDYDHDRRHWLKFEGVDNFVVEG--NGIINGNGKKWWQNSCKVNKEL 179
            +I G + AS + SDY  D+ HWL  E V+N  ++G   GIINGNGK WWQNSCK++K  
Sbjct: 128 FQILGTLSASTKRSDY-KDKNHWLILEDVNNLSIDGGSTGIINGNGKTWWQNSCKIDKSK 187

Query: 180 PCRRAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENSPNTDGIH 239
           PC +APTA+T Y   NL V NL+++NAQQ+ ++ +KC  V+  N+ + AP +SPNTDGIH
Sbjct: 188 PCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDGIH 247

Query: 240 VTETQNVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSEAEVSNI 299
           +T TQN+ + N  IGTGDDCISI  G++N++  D+TCGPGHGISIGSLG  NS+A VS I
Sbjct: 248 ITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGISIGSLGDDNSKAYVSGI 307

Query: 300 RVDRALISGTSNGVRIKTW--------------------------------------QNS 359
            VD A  S + NGVRIKT+                                      Q S
Sbjct: 308 NVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQDYCDKDKCEDQES 367

Query: 360 AVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATASCENVRLK 388
           AV+V NVVYKNI GTSA+D AI  +CS+  PCQ I +  V +        TASC+N  +K
Sbjct: 368 AVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVLENVKI-----KGGTASCKNANVK 427

[Close]

BLAST of Csor.00g186970 vs. TAIR 10
Match: AT1G80170.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 300.1 bits (767), Expect = 2.7e-81
Identity = 165/382 (43.19%), Postives = 222/382 (58.12%), Query Frame = 0


Query: 46  RQDRVSSLSGSPKVVNVDDFGAKGNG-QDDSKAFELAWKEACSSS-KAMILVPKGRTYYL 105
           RQ R S+   S ++++V +FGAKGNG  DD+KAF  AWK ACSS  K  ILVP+  T  L
Sbjct: 40  RQSR-STRPRSERLLHVGNFGAKGNGVTDDTKAFADAWKTACSSKVKTRILVPENYTCLL 99

Query: 106 KSITFSGPCRSPLTLKIDGIIKASPRMSDYDH-DRRHWLKFEGVDNFVVEGNGIINGNGK 165
           + I  SGPC++ LTL+I G I A      ++  +RR WL F G+    VEG G +NG G+
Sbjct: 100 RPIDLSGPCKARLTLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQ 159

Query: 166 KWWQNSCKVNKELPCRRAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRV 225
           +WW+ SCK N   PCR APTA+TF++C N+ V NL + ++QQMH+    C  V    L+V
Sbjct: 160 EWWERSCKHNHSNPCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKV 219

Query: 226 VAPENSPNTDGIHVTETQNVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGS 285
           +AP  SPNTDGIH++ ++ ++I N  + TGDDCISIV  S  +   +I CGPGHGISIGS
Sbjct: 220 IAPATSPNTDGIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGS 279

Query: 286 LGAGNSEAEVSNIRVDRALISGTSNGVRIKTW---------------------------- 345
           LG   S  EV +I VD A+IS T+NGVRIKTW                            
Sbjct: 280 LGKSKSWEEVRDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQ 339

Query: 346 -----------QNSAVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHL-VRQ 385
                      Q SA+ + N+ + ++RGTSAS +AI+  CS SSPC++I +  + L    
Sbjct: 340 YYCDSRKPCANQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEPSN 399

[Close]

BLAST of Csor.00g186970 vs. TAIR 10
Match: AT1G70500.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 282.3 bits (721), Expect = 5.7e-76
Identity = 148/356 (41.57%), Postives = 211/356 (59.27%), Query Frame = 0


Query: 51  SSLSGSPKVVNVDDFGAKGNG-QDDSKAFELAWKEACSSSKAMILVPKGRTYYLKSITFS 110
           S  SG   +VNVD F A G+G  DD++AF  AW  ACS+  +++LVP+GR+Y + +  F 
Sbjct: 59  SQYSGK-NLVNVDSFNASGDGVSDDTQAFIRAWTMACSAPNSVLLVPQGRSYLVNATKFD 118

Query: 111 GPCRSPLTLKIDGIIKASPRMSDYDHD-RRHWLKFEGVDNFVVEGNGIINGNGKKWWQNS 170
           GPC+  L ++IDG I A    S +D    R+WL+F  +   V +GNG+I+G+G KWW  S
Sbjct: 119 GPCQEKLIIQIDGTIIAPDEPSQWDPKFPRNWLQFSKLQGVVFQGNGVIDGSGTKWWAAS 178

Query: 171 CKVNKELPCRRAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVQALNLRVVAPENS 230
           CK NK  PC  APTA+T Y   N+ V  L + N+QQMHL  Q+ T V+   + V +P +S
Sbjct: 179 CKKNKSNPCVGAPTALTIYSSSNVYVRGLTIRNSQQMHLIIQRSTTVRISRVMVTSPGDS 238

Query: 231 PNTDGIHVTETQNVIIKNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNS 290
           PNTDGIH+T + +V++++  I TGDDC+SIV+GS  ++   I CGPGHGISIGSLG G+S
Sbjct: 239 PNTDGIHITASTDVVVQDSKISTGDDCVSIVNGSAKIKMKRIYCGPGHGISIGSLGQGHS 298

Query: 291 EAEVSNIRVDRALISGTSNGVRIKTW---------------------------------- 350
           +  V+ + ++ A +  T+NG+RIKTW                                  
Sbjct: 299 KGTVTAVVLETAFLKNTTNGLRIKTWQGGNGYVKGVRFENVVMQDVANPIIIDQFYCDSP 358

Query: 351 -----QNSAVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDD 366
                Q SAV +S ++Y+NI GT+ S  AI F CS + PC  I +  ++L  +G+D
Sbjct: 359 STCQNQTSAVHISEIMYRNITGTTKSSKAINFKCSDAVPCSHIVLNNINL--EGND 411

The following BLAST results are available for this feature:

BLAST of Csor.00g186970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35336	1.4e-114	53.38	Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1	[more]
Q9SFB7	9.4e-108	51.04	Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2	[more]
P05117	6.3e-104	52.96	Polygalacturonase-2 OS=Solanum lycopersicum OX=4081 GN=PG2 PE=1 SV=1	[more]
Q02096	1.7e-101	50.79	Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1	[more]
P48978	2.1e-99	52.38	Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1	[more]

BLAST of Csor.00g186970 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581572.1	3.89e-293	100.00	hypothetical protein SDJN03_21574, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022934263.1	9.40e-277	88.55	polygalacturonase [Cucurbita moschata]	[more]
XP_023521323.1	1.81e-274	88.08	polygalacturonase-like [Cucurbita pepo subsp. pepo] >XP_023528797.1 polygalactur...	[more]
XP_022982564.1	1.59e-271	86.77	polygalacturonase [Cucurbita maxima]	[more]
XP_038905664.1	5.03e-239	78.22	polygalacturonase-like [Benincasa hispida]	[more]

BLAST of Csor.00g186970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F768	4.55e-277	88.55	polygalacturonase OS=Cucurbita moschata OX=3662 GN=LOC111441479 PE=3 SV=1	[more]
A0A6J1J4X9	7.72e-272	86.77	polygalacturonase OS=Cucurbita maxima OX=3661 GN=LOC111481403 PE=3 SV=1	[more]
A0A1S3CG06	6.44e-235	76.44	polygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103500316 PE=3 SV=1	[more]
A0A6J1DF97	6.58e-229	74.88	polygalacturonase-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020284...	[more]
A0A5D3BPX8	3.04e-221	69.70	Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6...	[more]

BLAST of Csor.00g186970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07970.1	6.7e-109	51.04	Pectin lyase-like superfamily protein	[more]
AT2G41850.1	1.4e-98	50.67	polygalacturonase abscission zone A. thaliana	[more]
AT3G57510.1	1.8e-93	48.92	Pectin lyase-like superfamily protein	[more]
AT1G80170.1	2.7e-81	43.19	Pectin lyase-like superfamily protein	[more]
AT1G70500.1	5.7e-76	41.57	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 146..188 e-value: 6200.0 score: 1.6 coord: 212..238 e-value: 3000.0 score: 3.8 coord: 321..343 e-value: 2900.0 score: 4.0 coord: 239..260 e-value: 120.0 score: 11.5 coord: 292..313 e-value: 470.0 score: 9.5
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 89..329 e-value: 2.7E-75 score: 253.4
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 269..282
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 43..385 e-value: 5.5E-99 score: 333.9
None	No IPR available	PANTHER	PTHR31375:SF167	POLYGALACTURONASE QRT2	coord: 316..377 coord: 48..316
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 316..377 coord: 48..316
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 54..387

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g186970.m01	Csor.00g186970.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009901	anther dehiscence
biological_process	GO:0010047	fruit dehiscence
biological_process	GO:0045490	pectin catabolic process
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity