Csor.00g186940 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g186940
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 6552911 .. 6554268 (+)
RNA-Seq ExpressionCsor.00g186940
SyntenyCsor.00g186940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATTTCCCCTCATTTCCTTACAACTCCCAACATTAAATTTAAATTCCCCCAAAACTTTCCAATCCGCATTTCATTTCAATTTCAGACGTTAATTTCTTCTTCTTCTTCTTCGTCTTCCTCATCTCCCCCCCTTCTCTCTCTCTCTCTCTGAAAACTTTCTCTTCTTCTTCTTTATTTCCTTCACCGGCGCCGGAGATGATGTCTTTTAGCTTCATCTTTCCGATCTTCTTCTTTTCATTCAGTGAAGTGGCTCTTTCTTCCTCCGTTTTCTCCTCCGATCGATGAGTTCCACTTTCGAAGCCCGCTTTCTTCTCTCTCTCAGATCTCTGCCTGGTTTTCTTCTGCTGCTATAGATAACTGTGAGTTTTTGTTTTGTAGTTCGGATTGAGCTTGAAGCTTAACATTTTGGAAAAAATATTCTTTTTATTAATTTTATATTTCGTTTGGATGGAGGATGCAGGGGTTTCAATTGGAGTTTAGTACGTGTGAAGTTTTAATTAAGTTTTATTGTTGTTGTGTTGTGAGGATCGTGATATTACAGTTGACGTTTGTTGATATTGATCTGTTTTTATCAGCTTCGTTTTCTCTTGAGCGACCTGCTTTGTTAATTTTGAGTTTTCTCTTTTGGATTTTGATTCTAATGTTTCTCTTCTGTTTACCTGTGTCTGGATAATTTTTTTTTTTCTAATATTGATGTGTTCTGTTTGTTTAATCTCTGTGATCGTTGATTTTCTAGGAGTGGAGGGAAGTTGGGAGATGTTTTTTTGGTGATTTTTGCGAAGAAATTTTTATAATATTGAGATGAAACAGATTGCTTTTAGTTGAAACTCTTAAGCTTCAGATCGAAACCTTCATCTTAGTAGGATCGTTTTTAATTCCGGTGATTATCGCTTAGCATATAGTACTTAAATATAGAATCATATGTCAAGTATGAGTACAGCTTTCCTCGAGTGTGGTCGCCTGCTGTTTACCTATTATATGGGTTTGTCATTCGTCTTAAGCTCCTGTGGGTACCAGTTTCCAACTCTTGGTTGGTCCTTATCATTACACAATTGGAAAGTACTCTTGGGTGGAGTGAGTTTCTGTTTTCTGATGTATTTGAGATTTTCTCGGTGGATATTTGTTATTCATAGGCCTGTTATGATTTGTTGCTTTTTGATGAAAGAGTTCTGCAATCCTGTTCACTGATTATCCCAAACTAATTTATTGTAGAAGCTTTTTATTTGCTTATTCTGGTGAGCTTTTGAACATATTCTTTTCGTATTTGTATTTAATTCCCTCGACCTTCTGATTTTGTTGATGTAATATGAGGCATAAATACCCAATTTTTTTTTCTTTGATTGCAGATATTTGA

mRNA sequence

ATGTCATTTCCCCTCATTTCCTTACAACTCCCAACATTAAATTTAAATTCCCCCAAAACTTTCCAATCCGCATTTCATTTCAATTTCAGACTGAAGTGGCTCTTTCTTCCTCCGTTTTCTCCTCCGATCGATGAGTTCCACTTTCGAAGCCCGCTTTCTTCTCTCTCTCAGATCTCTGCCTGGTTTTCTTCTGCTGCTATAGATAACTATATTTGA

Coding sequence (CDS)

ATGTCATTTCCCCTCATTTCCTTACAACTCCCAACATTAAATTTAAATTCCCCCAAAACTTTCCAATCCGCATTTCATTTCAATTTCAGACTGAAGTGGCTCTTTCTTCCTCCGTTTTCTCCTCCGATCGATGAGTTCCACTTTCGAAGCCCGCTTTCTTCTCTCTCTCAGATCTCTGCCTGGTTTTCTTCTGCTGCTATAGATAACTATATTTGA

Protein sequence

MSFPLISLQLPTLNLNSPKTFQSAFHFNFRLKWLFLPPFSPPIDEFHFRSPLSSLSQISAWFSSAAIDNYI
Homology
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BLAST of Csor.00g186940 vs. NCBI nr
Match: KAG6581575.1 (hypothetical protein SDJN03_21577, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147 bits (372), Expect = 1.02e-44
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MSFPLISLQLPTLNLNSPKTFQSAFHFNFRLKWLFLPPFSPPIDEFHFRSPLSSLSQISA 60
          MSFPLISLQLPTLNLNSPKTFQSAFHFNFRLKWLFLPPFSPPIDEFHFRSPLSSLSQISA
Sbjct: 1  MSFPLISLQLPTLNLNSPKTFQSAFHFNFRLKWLFLPPFSPPIDEFHFRSPLSSLSQISA 60

Query: 61 WFSSAAIDNYI 71
          WFSSAAIDNYI
Sbjct: 61 WFSSAAIDNYI 71

The following BLAST results are available for this feature:
BLAST of Csor.00g186940 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g186940 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6581575.11.02e-44100.00hypothetical protein SDJN03_21577, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g186940 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g186940 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g186940.m01Csor.00g186940.m01mRNA