Csor.00g186810 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g186810
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DNA damage-repair/toleration protein DRT100-like
Location	Csor_Chr14: 6631187 .. 6631729 (-)
RNA-Seq Expression	Csor.00g186810
Synteny	Csor.00g186810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTACTTGTTGTCTTCTTCCTCTTCGCCGCCGTCGAAGCTTGCTCGCCTTCGGGCCAGGCGGCCCTGCTCGCATTCAAGGCGGCGCTGAACGAGCCGTATTTAGGAATCTTCAATTCGTGGACTGGAAATTCTTGCTGCGGTGGCTGGTATGGAGTCAGCTGTGATCCTGAAACTCTCGAGGTCACTGAAATTAGCCTCCGCGGTGAGTCTGAGGATCCGATCTTCCAGAAGGCCGGCCGAACCGGGTACATGACCGGCTCGATTTCGCCTGAGATTTGTAAACTCGATAGGCTCACGATCCTCATCATTTCCGATTGGAAAGGAATCTCCGGTGAGATTCCGAAGTGCTTGACGAAACTCAGCCAACTCCGAGTTCTCGACCTCGTCGGAAACAAAATCAGCGGCGAAATTCCTTCGGATTTCGGAAACCTAAATCGCCTCACCGTGCTTAACCTCGCAGATAATGCGCTTTCCGGTACTATACCTAACTCGATCGTGAATATCGGCGGTCTGATGCATCTCGACCTCAGGAACAATTAA

mRNA sequence

ATGTTACTTGTTGTCTTCTTCCTCTTCGCCGCCGTCGAAGCTTGCTCGCCTTCGGGCCAGGCGGCCCTGCTCGCATTCAAGGCGGCGCTGAACGAGCCGTATTTAGGAATCTTCAATTCGTGGACTGGAAATTCTTGCTGCGGTGGCTGGTATGGAGTCAGCTGTGATCCTGAAACTCTCGAGGTCACTGAAATTAGCCTCCGCGGTGAGTCTGAGGATCCGATCTTCCAGAAGGCCGGCCGAACCGGGTACATGACCGGCTCGATTTCGCCTGAGATTTGTAAACTCGATAGGCTCACGATCCTCATCATTTCCGATTGGAAAGGAATCTCCGGTGAGATTCCGAAGTGCTTGACGAAACTCAGCCAACTCCGAGTTCTCGACCTCGTCGGAAACAAAATCAGCGGCGAAATTCCTTCGGATTTCGGAAACCTAAATCGCCTCACCGTGCTTAACCTCGCAGATAATGCGCTTTCCGGTACTATACCTAACTCGATCGTGAATATCGGCGGTCTGATGCATCTCGACCTCAGGAACAATTAA

Coding sequence (CDS)

ATGTTACTTGTTGTCTTCTTCCTCTTCGCCGCCGTCGAAGCTTGCTCGCCTTCGGGCCAGGCGGCCCTGCTCGCATTCAAGGCGGCGCTGAACGAGCCGTATTTAGGAATCTTCAATTCGTGGACTGGAAATTCTTGCTGCGGTGGCTGGTATGGAGTCAGCTGTGATCCTGAAACTCTCGAGGTCACTGAAATTAGCCTCCGCGGTGAGTCTGAGGATCCGATCTTCCAGAAGGCCGGCCGAACCGGGTACATGACCGGCTCGATTTCGCCTGAGATTTGTAAACTCGATAGGCTCACGATCCTCATCATTTCCGATTGGAAAGGAATCTCCGGTGAGATTCCGAAGTGCTTGACGAAACTCAGCCAACTCCGAGTTCTCGACCTCGTCGGAAACAAAATCAGCGGCGAAATTCCTTCGGATTTCGGAAACCTAAATCGCCTCACCGTGCTTAACCTCGCAGATAATGCGCTTTCCGGTACTATACCTAACTCGATCGTGAATATCGGCGGTCTGATGCATCTCGACCTCAGGAACAATTAA

Protein sequence

MLLVVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETLEVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTKLSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLRNN

Homology

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BLAST of Csor.00g186810 vs. ExPASy Swiss-Prot
Match: Q00874 (DNA damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana OX=3702 GN=DRT100 PE=2 SV=2)

HSP 1 Score: 225.7 bits (574), Expect = 4.2e-58
Identity = 107/182 (58.79%), Postives = 141/182 (77.47%), Query Frame = 0


Query: 1   MLLVVFF-LFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNS-CCGGWYGVSCDPE 60
           +L VVF  + + V  CSP  Q AL AFK++L+EP LGIFN+W+ N+ CC  WYG+SCDP+
Sbjct: 12  LLAVVFISVISVVRCCSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPD 71

Query: 61  TLEVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCL 120
           +  VT+ISLRGESED IFQKAGR+GYM+GSI P +C L  LT L+++DWKGI+GEIP C+
Sbjct: 72  SGRVTDISLRGESEDAIFQKAGRSGYMSGSIDPAVCDLTALTSLVLADWKGITGEIPPCI 131

Query: 121 TKLSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLR 180
           T L+ LR+LDL GNKI+GEIP++ G L++L VLNLA+N +SG IP S+ ++  L HL+L 
Sbjct: 132 TSLASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELT 191

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BLAST of Csor.00g186810 vs. ExPASy Swiss-Prot
Match: A7PW81 (Polygalacturonase inhibitor OS=Vitis vinifera OX=29760 GN=pgip PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-19
Identity = 58/167 (34.73%), Postives = 84/167 (50.30%), Query Frame = 0


Query: 13  EACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETLEVTEISLRGESE 72
           E C+P  +  LL  K AL+ PY  I  SW  N+ C GWY V CD  T  +  +++     
Sbjct: 28  ERCNPKDKKVLLQIKKALDNPY--ILASWNPNTDCCGWYCVECDLTTHRINSLTI----- 87

Query: 73  DPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTKLSQLRVLDLVGN 132
                    +G ++G I   +  L  L  LI      ++G+IP  + KL  L+++ L   
Sbjct: 88  --------FSGQLSGQIPDAVGDLPFLETLIFRKLSNLTGQIPPAIAKLKHLKMVRLSWT 147

Query: 133 KISGEIPSDFGNLNRLTVLNLADNALSGTIPNS---IVNIGGLMHLD 177
            +SG +P+ F  L  LT L+L+ N LSG IP S   + N+G L HLD
Sbjct: 148 NLSGPVPAFFSELKNLTYLDLSFNNLSGPIPGSLSLLPNLGAL-HLD 178

[Close]

BLAST of Csor.00g186810 vs. ExPASy Swiss-Prot
Match: Q9M5J8 (Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana OX=3702 GN=PGIP2 PE=2 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 7.2e-18
Identity = 59/175 (33.71%), Postives = 83/175 (47.43%), Query Frame = 0


Query: 11  AVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETL--EVTEISLR 70
           A + C    +  LL  K +LN PY     SW   + C  WY + C   T+   VT + ++
Sbjct: 21  AKDLCHKDDKTTLLKIKKSLNNPY--HLASWDPKTDCCSWYCLECGDATVNHRVTSLIIQ 80

Query: 71  -GESEDPIFQKAGRTGY-----------MTGSISPEICKLDRLTILIISDWKGISGEIPK 130
            GE    I  + G   Y           +TG I P I KL  LT L +S W  ++G +P+
Sbjct: 81  DGEISGQIPPEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLS-WTNLTGPVPE 140

Query: 131 CLTKLSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGG 172
            L++L  L  +DL  N +SG IPS   +L +L  L L+ N L+G IP S     G
Sbjct: 141 FLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGPIPESFGTFSG 192

[Close]

BLAST of Csor.00g186810 vs. ExPASy Swiss-Prot
Match: Q05091 (Polygalacturonase inhibitor OS=Pyrus communis OX=23211 GN=PGIP PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-17
Identity = 62/184 (33.70%), Postives = 86/184 (46.74%), Query Frame = 0


Query: 10  AAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETLEVTEISL-R 69
           A  + C+P  +  LL  K A  +PY  +  SW  ++ C  WY V+CD  T  +  +++  
Sbjct: 22  ALSDLCNPDDKKVLLQIKKAFGDPY--VLASWKSDTDCCDWYCVTCDSTTNRINSLTIFA 81

Query: 70  GESEDPIFQKAGRTGY-----------MTGSISPEICKLDRLTILIISDWKGISGEIPKC 129
           G+    I    G   Y           +TG I P I KL  L  L +S W  +SG +P  
Sbjct: 82  GQVSGQIPALVGDLPYLETLEFHKQPNLTGPIQPAIAKLKGLKSLRLS-WTNLSGSVPDF 141

Query: 130 LTKLSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVN-IGGLMHLD 181
           L++L  L  LDL  N ++G IPS    L  L  L L  N L+G IP S    IG +  L 
Sbjct: 142 LSQLKNLTFLDLSFNNLTGAIPSSLSELPNLGALRLDRNKLTGHIPISFGQFIGNVPDLY 201

[Close]

BLAST of Csor.00g186810 vs. ExPASy Swiss-Prot
Match: C0LGD7 (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 2.7e-17
Identity = 60/185 (32.43%), Postives = 92/185 (49.73%), Query Frame = 0


Query: 3   LVVFFL-------FAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSC 62
           L+ FFL       FA  +  +P    AL   K +LN+P   + N   G+ C   W GV C
Sbjct: 14  LLFFFLFCCFSSTFAQDDITNPVEVRALRVIKESLNDPVHRLRNWKHGDPCNSNWTGVVC 73

Query: 63  DPETLEVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIP 122
              TL+   + +   SE  +F        ++G++SPE+ +L RLTIL    W  I+G IP
Sbjct: 74  FNSTLDDGYLHV---SELQLFSM-----NLSGNLSPELGRLSRLTILSFM-WNKITGSIP 133

Query: 123 KCLTKLSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHL 181
           K +  +  L +L L GN ++G +P + G L  L  + + +N +SG +P S  N+    H 
Sbjct: 134 KEIGNIKSLELLLLNGNLLNGNLPEELGFLPNLDRIQIDENRISGPLPKSFANLNKTKHF 189

[Close]

BLAST of Csor.00g186810 vs. NCBI nr
Match: KAG6581587.1 (DNA damage-repair/toleration protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 363 bits (931), Expect = 1.74e-126
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MLLVVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETL 60
           MLLVVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETL
Sbjct: 1   MLLVVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETL 60

Query: 61  EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTK 120
           EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTK
Sbjct: 61  EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTK 120

Query: 121 LSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLRNN 180
           LSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLRNN
Sbjct: 121 LSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLRNN 180

[Close]

BLAST of Csor.00g186810 vs. NCBI nr
Match: XP_023521548.1 (DNA damage-repair/toleration protein DRT100-like [Cucurbita pepo subsp. pepo] >XP_023528717.1 DNA damage-repair/toleration protein DRT100-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357 bits (916), Expect = 3.17e-121
Identity = 176/180 (97.78%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MLLVVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETL 60
           MLLVVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYG+SCDPETL
Sbjct: 21  MLLVVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGISCDPETL 80

Query: 61  EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTK 120
           EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLD LTILIISDWKGISGEIPKCLTK
Sbjct: 81  EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDSLTILIISDWKGISGEIPKCLTK 140

Query: 121 LSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLRNN 180
           LSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNA+SGTIP SIVNIGGLMHLDLRNN
Sbjct: 141 LSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNAISGTIPKSIVNIGGLMHLDLRNN 200

[Close]

BLAST of Csor.00g186810 vs. NCBI nr
Match: XP_022983354.1 (DNA damage-repair/toleration protein DRT100-like [Cucurbita maxima])

HSP 1 Score: 352 bits (902), Expect = 2.33e-119
Identity = 174/180 (96.67%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MLLVVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETL 60
           MLLVVFFLFAAVEACSPS QAALLAFKAALNEPYLGIF+SWTGNSCCGGWYGVSCDPETL
Sbjct: 3   MLLVVFFLFAAVEACSPSSQAALLAFKAALNEPYLGIFSSWTGNSCCGGWYGVSCDPETL 62

Query: 61  EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTK 120
           EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRL ILIISDWKGISGEIPKCLTK
Sbjct: 63  EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLMILIISDWKGISGEIPKCLTK 122

Query: 121 LSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLRNN 180
           L QLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNA+SGTIP SIVNIGGLMHLDLRNN
Sbjct: 123 LGQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNAISGTIPKSIVNIGGLMHLDLRNN 182

[Close]

BLAST of Csor.00g186810 vs. NCBI nr
Match: KAG7018090.1 (DNA damage-repair/toleration protein DRT-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 344 bits (882), Expect = 1.25e-117
Identity = 172/180 (95.56%), Postives = 173/180 (96.11%), Query Frame = 0


Query: 1   MLLVVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETL 60
           MLLVVFFLFAAVEACSPSGQAAL       NEPYLGIFNSWTGNSCCGGWYGVSCDPETL
Sbjct: 3   MLLVVFFLFAAVEACSPSGQAAL-------NEPYLGIFNSWTGNSCCGGWYGVSCDPETL 62

Query: 61  EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTK 120
           EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTK
Sbjct: 63  EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTK 122

Query: 121 LSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLRNN 180
           LSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNA+SGTIPNSIVNIGGLMHLDLRNN
Sbjct: 123 LSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNAISGTIPNSIVNIGGLMHLDLRNN 175

[Close]

BLAST of Csor.00g186810 vs. NCBI nr
Match: XP_038906345.1 (DNA damage-repair/toleration protein DRT100-like [Benincasa hispida])

HSP 1 Score: 332 bits (851), Expect = 1.54e-111
Identity = 161/180 (89.44%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MLLVVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETL 60
           +LLVVFFLFAAV+ACSPS +AALL+FKAAL EPYLGIFNSWTG+SCCGGWYGVSCDPETL
Sbjct: 8   ILLVVFFLFAAVDACSPSDRAALLSFKAALKEPYLGIFNSWTGDSCCGGWYGVSCDPETL 67

Query: 61  EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTK 120
           +VT+ISLRGESEDPIF+KAGRTGYMTGSISP+ICKLDRLTIL+I+DWKGISGEIPKCLTK
Sbjct: 68  KVTDISLRGESEDPIFEKAGRTGYMTGSISPDICKLDRLTILVIADWKGISGEIPKCLTK 127

Query: 121 LSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLRNN 180
           LS LRVLDLVGNKISGEIPSD GNLNRLTVLNLA+NA+SGTIP SIVNIGGL HLDLRNN
Sbjct: 128 LSHLRVLDLVGNKISGEIPSDIGNLNRLTVLNLAENAISGTIPASIVNIGGLKHLDLRNN 187

[Close]

BLAST of Csor.00g186810 vs. ExPASy TrEMBL
Match: A0A6J1J739 (DNA damage-repair/toleration protein DRT100-like OS=Cucurbita maxima OX=3661 GN=LOC111481962 PE=4 SV=1)

HSP 1 Score: 352 bits (902), Expect = 1.13e-119
Identity = 174/180 (96.67%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MLLVVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETL 60
           MLLVVFFLFAAVEACSPS QAALLAFKAALNEPYLGIF+SWTGNSCCGGWYGVSCDPETL
Sbjct: 3   MLLVVFFLFAAVEACSPSSQAALLAFKAALNEPYLGIFSSWTGNSCCGGWYGVSCDPETL 62

Query: 61  EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTK 120
           EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRL ILIISDWKGISGEIPKCLTK
Sbjct: 63  EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLMILIISDWKGISGEIPKCLTK 122

Query: 121 LSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLRNN 180
           L QLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNA+SGTIP SIVNIGGLMHLDLRNN
Sbjct: 123 LGQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNAISGTIPKSIVNIGGLMHLDLRNN 182

[Close]

BLAST of Csor.00g186810 vs. ExPASy TrEMBL
Match: A0A5A7TYV5 (DNA-damage-repair/toleration protein DRT100-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00370 PE=4 SV=1)

HSP 1 Score: 324 bits (831), Expect = 7.57e-109
Identity = 157/180 (87.22%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 1   MLLVVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETL 60
           +LLV FFLFA+V+ACSPS +AALLAFKAAL EPYLGIFNSWTGNSCCGGWYGVSCDPETL
Sbjct: 6   ILLVGFFLFASVDACSPSDRAALLAFKAALQEPYLGIFNSWTGNSCCGGWYGVSCDPETL 65

Query: 61  EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTK 120
           +VT+I+LRGESEDPIF+KAGRTGYMTGSISPEICKLDRLT+L+I+DWKGISGEIPKCLTK
Sbjct: 66  KVTDITLRGESEDPIFEKAGRTGYMTGSISPEICKLDRLTVLVIADWKGISGEIPKCLTK 125

Query: 121 LSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLRNN 180
           LS LRVLDLVGNKISGEIPSD GNLN LTVLNLA+NA+SG+IP SIVNIG L HLDLRNN
Sbjct: 126 LSPLRVLDLVGNKISGEIPSDIGNLNSLTVLNLAENAISGSIPASIVNIGSLKHLDLRNN 185

[Close]

BLAST of Csor.00g186810 vs. ExPASy TrEMBL
Match: A0A1S4E3F2 (DNA-damage-repair/toleration protein DRT100-like OS=Cucumis melo OX=3656 GN=LOC103500307 PE=4 SV=1)

HSP 1 Score: 324 bits (831), Expect = 7.57e-109
Identity = 157/180 (87.22%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 1   MLLVVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETL 60
           +LLV FFLFA+V+ACSPS +AALLAFKAAL EPYLGIFNSWTGNSCCGGWYGVSCDPETL
Sbjct: 6   ILLVGFFLFASVDACSPSDRAALLAFKAALQEPYLGIFNSWTGNSCCGGWYGVSCDPETL 65

Query: 61  EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTK 120
           +VT+I+LRGESEDPIF+KAGRTGYMTGSISPEICKLDRLT+L+I+DWKGISGEIPKCLTK
Sbjct: 66  KVTDITLRGESEDPIFEKAGRTGYMTGSISPEICKLDRLTVLVIADWKGISGEIPKCLTK 125

Query: 121 LSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLRNN 180
           LS LRVLDLVGNKISGEIPSD GNLN LTVLNLA+NA+SG+IP SIVNIG L HLDLRNN
Sbjct: 126 LSPLRVLDLVGNKISGEIPSDIGNLNSLTVLNLAENAISGSIPASIVNIGSLKHLDLRNN 185

[Close]

BLAST of Csor.00g186810 vs. ExPASy TrEMBL
Match: A0A6J1KCI1 (DNA damage-repair/toleration protein DRT100-like OS=Cucurbita maxima OX=3661 GN=LOC111493071 PE=4 SV=1)

HSP 1 Score: 322 bits (826), Expect = 1.34e-107
Identity = 155/177 (87.57%), Postives = 167/177 (94.35%), Query Frame = 0


Query: 4   VVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETLEVT 63
           VVFFLFA V+ACSPS +AALLAFKAAL EPYLGIFNSWTG+SCCGGWYGVSCDP+TL+VT
Sbjct: 44  VVFFLFAVVDACSPSDRAALLAFKAALKEPYLGIFNSWTGDSCCGGWYGVSCDPDTLKVT 103

Query: 64  EISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTKLSQ 123
           +ISLRGESEDPIF+KAGRTGYMTGSISPEICKLD LTILI++DWKGISGEIPKCLTKLS 
Sbjct: 104 DISLRGESEDPIFEKAGRTGYMTGSISPEICKLDSLTILIVADWKGISGEIPKCLTKLSH 163

Query: 124 LRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLRNN 180
           LRVLDLVGNKISGEIP D GNLN+LTVLN+ADNA+SGTIP SIVNIG L HLDLRNN
Sbjct: 164 LRVLDLVGNKISGEIPKDIGNLNKLTVLNIADNAISGTIPASIVNIGSLKHLDLRNN 220

[Close]

BLAST of Csor.00g186810 vs. ExPASy TrEMBL
Match: A0A6J1GCB0 (DNA damage-repair/toleration protein DRT100-like OS=Cucurbita moschata OX=3662 GN=LOC111452846 PE=4 SV=1)

HSP 1 Score: 319 bits (817), Expect = 9.78e-107
Identity = 153/177 (86.44%), Postives = 165/177 (93.22%), Query Frame = 0


Query: 4   VVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETLEVT 63
           VVFF FA V+ACSPS +AALLAFKAAL EPYLGIFNSWTG+SCCGGWYGVSCDP+TL+VT
Sbjct: 8   VVFFFFAVVDACSPSDRAALLAFKAALKEPYLGIFNSWTGDSCCGGWYGVSCDPDTLKVT 67

Query: 64  EISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTKLSQ 123
           +ISLRGESEDPIF+KAGRTGYMTGSISPEICKLD LTILI++DWKGISGEIPKCLTKLS 
Sbjct: 68  DISLRGESEDPIFEKAGRTGYMTGSISPEICKLDSLTILIVADWKGISGEIPKCLTKLSH 127

Query: 124 LRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLRNN 180
           LRVLDLVGNKISGEIP D GNLN+LTVLN+ADNA+SG IP SIVNIG L HLDLRNN
Sbjct: 128 LRVLDLVGNKISGEIPKDIGNLNKLTVLNIADNAISGAIPASIVNIGSLKHLDLRNN 184

[Close]

BLAST of Csor.00g186810 vs. TAIR 10
Match: AT3G20820.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 247.7 bits (631), Expect = 7.2e-66
Identity = 114/180 (63.33%), Postives = 142/180 (78.89%), Query Frame = 0


Query: 1   MLLVVFFLFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETL 60
           ++L++  L ++   C PS + ALLAF++AL+EPYLGIFNSWTG  CC  WYG+SCD  T 
Sbjct: 6   VVLLLLLLISSATCCPPSDRRALLAFRSALHEPYLGIFNSWTGQDCCHNWYGISCDSLTH 65

Query: 61  EVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTK 120
            V +I+LRGESEDPIF++A RTGYMTG IS  IC+L RL+ + I+DWKGISGEIPKC+T+
Sbjct: 66  RVADINLRGESEDPIFERAHRTGYMTGHISASICELTRLSAITIADWKGISGEIPKCITR 125

Query: 121 LSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLRNN 180
           L  LR LDL+GN+ISG IP D G LNRL VLN+ADN +SG+IP S+ N+  LMHLDLRNN
Sbjct: 126 LPFLRTLDLIGNQISGGIPYDIGRLNRLAVLNVADNRISGSIPKSLTNLSSLMHLDLRNN 185

[Close]

BLAST of Csor.00g186810 vs. TAIR 10
Match: AT5G12940.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 233.0 bits (593), Expect = 1.8e-61
Identity = 116/179 (64.80%), Postives = 134/179 (74.86%), Query Frame = 0


Query: 3   LVVFFLFA-AVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVSCDPETLE 62
           +VVF L +  V +C PS +AALL F+A LNEPY+G+FN+W G  CC GWYGVSCDP T  
Sbjct: 14  VVVFLLLSTTVHSCLPSDRAALLEFRAKLNEPYIGVFNTWKGLDCCKGWYGVSCDPNTRR 73

Query: 63  VTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTKL 122
           V  I+LRGESEDP+FQKA R+G MTGSISP ICKL RL+ +II+DWKGISG IP C+  L
Sbjct: 74  VAGITLRGESEDPLFQKAKRSGLMTGSISPSICKLTRLSGIIIADWKGISGVIPSCIENL 133

Query: 123 SQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLRNN 181
             LR LDLVGNK SG IP++ G L RL VLNLADN L G IP SI  +  L HLDLRNN
Sbjct: 134 PFLRHLDLVGNKFSGVIPANIGKLLRLKVLNLADNHLYGVIPPSITRLVSLSHLDLRNN 192

[Close]

BLAST of Csor.00g186810 vs. TAIR 10
Match: AT3G12610.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 225.7 bits (574), Expect = 2.9e-59
Identity = 107/182 (58.79%), Postives = 141/182 (77.47%), Query Frame = 0


Query: 1   MLLVVFF-LFAAVEACSPSGQAALLAFKAALNEPYLGIFNSWTGNS-CCGGWYGVSCDPE 60
           +L VVF  + + V  CSP  Q AL AFK++L+EP LGIFN+W+ N+ CC  WYG+SCDP+
Sbjct: 12  LLAVVFISVISVVRCCSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPD 71

Query: 61  TLEVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCL 120
           +  VT+ISLRGESED IFQKAGR+GYM+GSI P +C L  LT L+++DWKGI+GEIP C+
Sbjct: 72  SGRVTDISLRGESEDAIFQKAGRSGYMSGSIDPAVCDLTALTSLVLADWKGITGEIPPCI 131

Query: 121 TKLSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMHLDLR 180
           T L+ LR+LDL GNKI+GEIP++ G L++L VLNLA+N +SG IP S+ ++  L HL+L 
Sbjct: 132 TSLASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELT 191

[Close]

BLAST of Csor.00g186810 vs. TAIR 10
Match: AT5G23400.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 122.9 bits (307), Expect = 2.7e-28
Identity = 70/191 (36.65%), Postives = 101/191 (52.88%), Query Frame = 0


Query: 15  CSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGG-WYGVSCDPETLEVTEISLRGESED 74
           CS   +A LL FK+++ E   G+ +SW G  CC G W GV C+P T +VT + L+    +
Sbjct: 31  CSSQDRATLLGFKSSIIEDTTGVLDSWVGKDCCNGDWEGVQCNPATGKVTGLVLQSAVNE 90

Query: 75  PIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEIPKCLTKLSQLR-------- 134
           P       T YM G++SP +  L  L +L+I+  K I+G IP   + L+ LR        
Sbjct: 91  P-------TLYMKGTLSPSLGNLRSLELLLITGNKFITGSIPNSFSNLTSLRQLILDDNS 150

Query: 135 ----------------VLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNI 181
                           +L L GN+ SG +P+ FG+L RLT +NLA N+ SG IP +  N+
Sbjct: 151 LQGNVLSSLGHLPLLEILSLAGNRFSGLVPASFGSLRRLTTMNLARNSFSGPIPVTFKNL 210

[Close]

BLAST of Csor.00g186810 vs. TAIR 10
Match: AT2G26380.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-23
Identity = 65/186 (34.95%), Postives = 100/186 (53.76%), Query Frame = 0


Query: 6   FFLFAAV-----------EACSPSGQAALLAFKAALNEPYLGIFNSWTGNSCCGGWYGVS 65
           FF+F AV             C P  +A LLAFK+ + +   GI ++W   + C  W GVS
Sbjct: 9   FFIFTAVIFLRCLNPTAAATCHPDDEAGLLAFKSGITKDPSGILSTWKKGTDCCSWNGVS 68

Query: 66  CDPETLEVTEISLRGESEDPIFQKAGRTGYMTGSISPEICKLDRLTILIISDWKGISGEI 125
           C P    V  +++R ES+D     AG   +++G+ISP + KL  L  ++  + K I+G  
Sbjct: 69  C-PNGNRVVVLTIRIESDD-----AGI--FLSGTISPSLAKLQHLEGVVFINLKNITGPF 128

Query: 126 PKCLTKLSQLRVLDLVGNKISGEIPSDFGNLNRLTVLNLADNALSGTIPNSIVNIGGLMH 181
           P  L +L  L+ + L   ++SG +P++ G LNRL  L +  N   G+IP+SI N+  L +
Sbjct: 129 PPFLFRLPHLKYVYLENTRLSGPLPANIGALNRLDTLTVKGNRFIGSIPSSISNLTRLNY 186

The following BLAST results are available for this feature:

BLAST of Csor.00g186810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q00874	4.2e-58	58.79	DNA damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana OX=3702 GN=D...	[more]
A7PW81	1.7e-19	34.73	Polygalacturonase inhibitor OS=Vitis vinifera OX=29760 GN=pgip PE=1 SV=1	[more]
Q9M5J8	7.2e-18	33.71	Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana OX=3702 GN=PGIP2 PE=2 SV=2	[more]
Q05091	1.2e-17	33.70	Polygalacturonase inhibitor OS=Pyrus communis OX=23211 GN=PGIP PE=1 SV=1	[more]
C0LGD7	2.7e-17	32.43	Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidop...	[more]

BLAST of Csor.00g186810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581587.1	1.74e-126	100.00	DNA damage-repair/toleration protein, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_023521548.1	3.17e-121	97.78	DNA damage-repair/toleration protein DRT100-like [Cucurbita pepo subsp. pepo] >X...	[more]
XP_022983354.1	2.33e-119	96.67	DNA damage-repair/toleration protein DRT100-like [Cucurbita maxima]	[more]
KAG7018090.1	1.25e-117	95.56	DNA damage-repair/toleration protein DRT-like protein, partial [Cucurbita argyro...	[more]
XP_038906345.1	1.54e-111	89.44	DNA damage-repair/toleration protein DRT100-like [Benincasa hispida]	[more]

BLAST of Csor.00g186810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J739	1.13e-119	96.67	DNA damage-repair/toleration protein DRT100-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A5A7TYV5	7.57e-109	87.22	DNA-damage-repair/toleration protein DRT100-like protein OS=Cucumis melo var. ma...	[more]
A0A1S4E3F2	7.57e-109	87.22	DNA-damage-repair/toleration protein DRT100-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1KCI1	1.34e-107	87.57	DNA damage-repair/toleration protein DRT100-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1GCB0	9.78e-107	86.44	DNA damage-repair/toleration protein DRT100-like OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of Csor.00g186810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20820.1	7.2e-66	63.33	Leucine-rich repeat (LRR) family protein	[more]
AT5G12940.1	1.8e-61	64.80	Leucine-rich repeat (LRR) family protein	[more]
AT3G12610.1	2.9e-59	58.79	Leucine-rich repeat (LRR) family protein	[more]
AT5G23400.1	2.7e-28	36.65	Leucine-rich repeat (LRR) family protein	[more]
AT2G26380.1	1.2e-23	34.95	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 122..180 e-value: 2.3E-8 score: 33.7
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 21..56 e-value: 4.6E-9 score: 36.4
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 14..180 e-value: 9.1E-40 score: 138.7
None	No IPR available	PANTHER	PTHR48060:SF2	LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN-RELATED	coord: 4..180
None	No IPR available	PANTHER	PTHR48060	DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100	coord: 4..180
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 14..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g186810.m01	Csor.00g186810.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding