Csor.00g186580 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGTGGCTATGGCTTCTTGGACCTCTGGGCTTCACTCCAATCGCAGTTCTTGGACCCTCAAATCCTCTGAACCCCGTTTTGCTAATGGGGTTTTCACCAAGGGTTCCATCGCTTTTCAGACTAAATGTTTCTGCCTACTTCAGAGCCGAAGGTATGGGTGTGTCTTTCTGCTTAATTTTATCATACCCTTCTCAATTAGTTGAAGATTGTTATGATTTCTTTCAGTTTGAAAAATGTGTATCTGGGTTTCTTCCTGGATTTAGATTACATGGTTCAATTTAGTTTCCTGCTTGAGGGTTGCTTTTATTCCGGTTCCTATGGAGACATTTCTGTTGTAAGTTGTCATGGAGATGTATTGTCTGATTTTGTTCGCAACTCTTTTGGTTCATATTCTCGTTTATTTTGGTTTATAACTCTCGTTTAGTTCATAATCCTTTTGGTTCATAGTCTCATTTAATTGATTCATGTGTGAGAAATAGTATTGCTACAGGCTTGTCTAGCCTTGTTTTGAAATGTGTACTCATTGCTATTTTGTATTTGCTGGTGACTCCACGGGGAATATCAGCCTCAAATCTATGGTTTTTGGTTCTCACTTGACTTGAAAATGAACCAACATTCCCGTTGTTCTTGTTTCCTTTGTTCAAAATCGAATAGGTAGGAATTTAGGGTTCGCCTATTTGAAATAAGCACACACCACCTCACTAAGCATTGCATTCATTTGCATCTTGCATATAGTCCCAAAATAGGAAAACCCAGTGGACAGTATTGGTTGCTACGAGCCACGAGCCAAGGAGCCGAGTCATACCATCAAAAAATCAGGTAATTGGGAGGAGGTTTGTAAGAGAGACTTTGTAGTGTGAGAGTGTGAGAGATACATTTGTAAACACTTTGGTTATAGTGATTGACTATGGAACCGTGGGTGTAGTGAAATTTCTTCTCCCTGAACCACGTTTTCGTGTCTTTATGTTTAATTTCTGTTTGTGGGTGTGTGAGTGCGATCGATCTTGCTTCCGTTTCTGTTATAACAATTGGGTATAAGAACATTTTGGTTGTGACATTTGGGTACATCAATTTCATTTTTGTGAAGTTATGTTTATATGTTTGTTCCTGATCCTTCACCAGATGGTGTTCTTCCACCATGAAGAGCATTCCACGAGCTTCATCAGCTACATCTGTTCAGGTACTGAAGGTATCAATCAATGCATATGATTTGCAATTGTTCCATGCATGTTCTTAATTTTTGTCGGACCTCTCTCTCTTGGGAGTGGTTGCACAGGAGGATGGAAGTAACGGTGAAACTGATACAATTCCAACGCCCATAGTTATAATAGACCAGGACTCTGATGAAGATGCAACTGTGGTGGAAATAACCTTCGGCGATCGGCTTGGAGCTCTTCTCGACACGGTAAAAAGCTAATTCTTCATGTTGGCAAAGTCATCTTTAGCATTCCATTCCTTAGAGCTTGTTTCTAGATGATAATACTAAAGGGTAAAGCTTTACGAGTTGTGTTGTTTCGTTGTTTCGTTGTTTCGTATAATCGCCATTAAAAATGCATTGGTTATAGATGAATGCTCTGAAAAACCTGGGGCTGAATGTTGTGAAGGCGAATGTCTTTTTGGATTCTTCTGGAAAACACAACAGATTTTCCATCACGAGGGCGTAAGTATCGGCTTATTACGTTTACACGCTTCTATGGCTGTCTTTTACATTATTGAACGGTAGATTGTGATAGTAGAATGGCAACACCTTGAATTAGATTTGAACTTAAAAGTTGTTCCATTGTGATTTTGGTTTTTGATTGGTTTGGTAATATGCAGAGATACTGGAAGAAAGGTAGATGATCCAGAGTTGTTAGAGGCAATTCGTTTGACAATTATAAGCAACTTGATTGAGTATCATCCGGTAATGGTTCAAGAGATAATAGTCTGGTGGATCTCTGTTTATTAGAGACCTGCTTGTTTGAGTTCCTAAATTTGATGTTGGTTGTTCAGGAATCAAGTGCTCAGTTAGCAATGGGAGCTGCCTTTGGGGTTGTGCCACCAAAACAAGAGGTCTTATATAACTTTCCATTTCAAATGCCTATCCGCTATTGCATGATATTGTTTATATTTCTATTTGTGGGTGGGTAGGTGTGTAATAGTCCAAGCTCACCGCTAGCAGATATTGTACTCTTTGAGCGTTCCCTTTAAAACATGTATGCTAGGGAGAGGTTACCACACCCTTGTAAGCACACTGCCCGGTATCTGGCTCTGATAACATTTGTAGAAGTCTAAGCTCACTGCTAGCAAATATTGTCCTTTTTGGGCGGTCTCTTCTGGGATTCTCCTCAAGGTTGTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTTACAAGAATGCTTTGTTCCCCTCTCTAGGATCTCACAATCCACCCCTTTGGGGGGCTTAGCGTCCTCCTTGGCATACGGCCCGGTGTCTGGCTCTGATAACATTTGTAACAGCCTAAGCTCACGGCTAACAAATATTGTTCTTTTTGGGCTTTGTCTTTTGGGATTCTCCTCAAGGTTGTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAGGAAGCTTTGTTTCCCTCTCTAGGATCTCACAATCCACCCCTTTGGGGGCCAGCGTCCTCCTTGGCATACCGCCCGGTGTTTGGCTCTGATAACATTTGTAACAGCCTAAGCTCACTGCTAGCAAATATTGTCCTTTTTGGGCTTTCTCTTCCTTGATTCTCCTCAAGGTTGTAAAACGCGTCTGCTAGGGAGAGTTTTCCACACTCTTATAAGGAATGTTATGTTTTCTTCTCCAATTGATGTGGGATCTTACAATCCACCTCCTTTGGGGGCCAGTCCTTGCTGCCTCACCGTCTGGTGTCTAGCTCTAATACTATTTCTAACAACCCAAGCCCACCGCTAGCAAATATTGTCCTTTTTGTACTTTCCCTTCTAGGGTTTCCCCTCAGGATTTTAAAACGCGTCTGCTCAGGAGAAGTTTCCTTACTCTTATGAGAAATGTTTTATTTCTCTCTCCAACTGACGTGGGATCTCACAAAGTGAGTGGGTGGTGGGGGTAGGGGGCGGGTTAACAATGTAACAAGAGGCTCAAATGTTGGTTTTCTCCGGTTTAGAAATCGATAGGAATAAGAGTGCAGAAACCGCCCGACATTTTTTCCCTTTGTATCAGGATAAGAGTCTTCTCTCTTGTTCTACTTCTCAATGCATGTCATGTCACTCGATCTACCTATTCATTTCAACATTTTTTATGCATCATTTCCTACCTTTTATACCTCTTGTGTTACTGAATCATGGATCCTCCCGGTAGGTTACTCGATTGGAATGACGTTTTCTCCTTTACCTCATTTATTATACGTTATAATTTCTCAGGTTGACGTGGACGTTGCTACGCACATAAGCATTCGCGATGACGGTCCTGACCGAAGGTAACGCTAGCTTTGGGTAGAAAAGCATTGGCATAATCTTGCATACATGAAGTGAGACTCTCCTTTTACCCTTCACAGCTTACTGTATGTGGAGACAGCTGATCGACCGGGATTATTGGTCGATCTTGTGAAGATCATCACTGACATAAACGTCGCAGTTGGATCTGGAGAATTCGACACCGAGGTGACTATTTTCAGTTTGTAATTTGCAGTCCTTCACGGTTACTACTTAACTTCCATGGTAATTGCAAGTTTGTTTGTTGTTTGTACAGGGATTGTTGGCTAAGACCAAGTTTCATGTGAGCTATAGGGGCAAAGCCCTGATCAAACCTCTTCAGCAGGTTGGTAAACAATTAGATTACTGGTTACAATATGCAACATTGTTGCGGGTTACTGAGGATTTACGTCGAATTTTACAGGTTATATCAAATAGTTTACGATATTTCTTGAGGCGACCGACAACAGAGGAGGCGAGTTTTTAA ATGGCTGTGGCTATGGCTTCTTGGACCTCTGGGCTTCACTCCAATCGCAGTTCTTGGACCCTCAAATCCTCTGAACCCCGTTTTGCTAATGGGGTTTTCACCAAGGGTTCCATCGCTTTTCAGACTAAATGTTTCTGCCTACTTCAGAGCCGAAGATGGTGTTCTTCCACCATGAAGAGCATTCCACGAGCTTCATCAGCTACATCTGTTCAGGAGGATGGAAGTAACGGTGAAACTGATACAATTCCAACGCCCATAGTTATAATAGACCAGGACTCTGATGAAGATGCAACTGTGGTGGAAATAACCTTCGGCGATCGGCTTGGAGCTCTTCTCGACACGATGAATGCTCTGAAAAACCTGGGGCTGAATGTTGTGAAGGCGAATGTCTTTTTGGATTCTTCTGGAAAACACAACAGATTTTCCATCACGAGGGCAGATACTGGAAGAAAGGTAGATGATCCAGAGTTGTTAGAGGCAATTCGTTTGACAATTATAAGCAACTTGATTGAGTATCATCCGGAATCAAGTGCTCAGTTAGCAATGGGAGCTGCCTTTGGGGTTGTGCCACCAAAACAAGAGGTTGACGTGGACGTTGCTACGCACATAAGCATTCGCGATGACGGTCCTGACCGAAGCTTACTGTATGTGGAGACAGCTGATCGACCGGGATTATTGGTCGATCTTGTGAAGATCATCACTGACATAAACGTCGCAGTTGGATCTGGAGAATTCGACACCGAGGGATTGTTGGCTAAGACCAAGTTTCATGTGAGCTATAGGGGCAAAGCCCTGATCAAACCTCTTCAGCAGGTTATATCAAATAGTTTACGATATTTCTTGAGGCGACCGACAACAGAGGAGGCGAGTTTTTAA ATGGCTGTGGCTATGGCTTCTTGGACCTCTGGGCTTCACTCCAATCGCAGTTCTTGGACCCTCAAATCCTCTGAACCCCGTTTTGCTAATGGGGTTTTCACCAAGGGTTCCATCGCTTTTCAGACTAAATGTTTCTGCCTACTTCAGAGCCGAAGATGGTGTTCTTCCACCATGAAGAGCATTCCACGAGCTTCATCAGCTACATCTGTTCAGGAGGATGGAAGTAACGGTGAAACTGATACAATTCCAACGCCCATAGTTATAATAGACCAGGACTCTGATGAAGATGCAACTGTGGTGGAAATAACCTTCGGCGATCGGCTTGGAGCTCTTCTCGACACGATGAATGCTCTGAAAAACCTGGGGCTGAATGTTGTGAAGGCGAATGTCTTTTTGGATTCTTCTGGAAAACACAACAGATTTTCCATCACGAGGGCAGATACTGGAAGAAAGGTAGATGATCCAGAGTTGTTAGAGGCAATTCGTTTGACAATTATAAGCAACTTGATTGAGTATCATCCGGAATCAAGTGCTCAGTTAGCAATGGGAGCTGCCTTTGGGGTTGTGCCACCAAAACAAGAGGTTGACGTGGACGTTGCTACGCACATAAGCATTCGCGATGACGGTCCTGACCGAAGCTTACTGTATGTGGAGACAGCTGATCGACCGGGATTATTGGTCGATCTTGTGAAGATCATCACTGACATAAACGTCGCAGTTGGATCTGGAGAATTCGACACCGAGGGATTGTTGGCTAAGACCAAGTTTCATGTGAGCTATAGGGGCAAAGCCCTGATCAAACCTCTTCAGCAGGTTATATCAAATAGTTTACGATATTTCTTGAGGCGACCGACAACAGAGGAGGCGAGTTTTTAA MAVAMASWTSGLHSNRSSWTLKSSEPRFANGVFTKGSIAFQTKCFCLLQSRRWCSSTMKSIPRASSATSVQEDGSNGETDTIPTPIVIIDQDSDEDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNRFSITRADTGRKVDDPELLEAIRLTIISNLIEYHPESSAQLAMGAAFGVVPPKQEVDVDVATHISIRDDGPDRSLLYVETADRPGLLVDLVKIITDINVAVGSGEFDTEGLLAKTKFHVSYRGKALIKPLQQVISNSLRYFLRRPTTEEASF Homology
BLAST of Csor.00g186580 vs. ExPASy Swiss-Prot
Match: Q9FZ47 (ACT domain-containing protein ACR11 OS=Arabidopsis thaliana OX=3702 GN=ACR11 PE=1 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 1.7e-101 Identity = 187/248 (75.40%), Postives = 226/248 (91.13%), Query Frame = 0
BLAST of Csor.00g186580 vs. ExPASy Swiss-Prot
Match: P83643 (ACT domain-containing protein DS12, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_027381 PE=1 SV=2) HSP 1 Score: 346.7 bits (888), Expect = 2.6e-94 Identity = 177/237 (74.68%), Postives = 204/237 (86.08%), Query Frame = 0
BLAST of Csor.00g186580 vs. ExPASy Swiss-Prot
Match: Q0J709 (ACT domain-containing protein DS12, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0242700 PE=4 SV=2) HSP 1 Score: 346.7 bits (888), Expect = 2.6e-94 Identity = 177/237 (74.68%), Postives = 204/237 (86.08%), Query Frame = 0
BLAST of Csor.00g186580 vs. ExPASy Swiss-Prot
Match: Q9LZ23 (ACT domain-containing protein ACR12 OS=Arabidopsis thaliana OX=3702 GN=ACR12 PE=2 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 2.5e-73 Identity = 133/232 (57.33%), Postives = 182/232 (78.45%), Query Frame = 0
BLAST of Csor.00g186580 vs. ExPASy Swiss-Prot
Match: Q5LWE5 (Bifunctional uridylyltransferase/uridylyl-removing enzyme OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=glnD PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06 Identity = 55/199 (27.64%), Postives = 87/199 (43.72%), Query Frame = 0
BLAST of Csor.00g186580 vs. NCBI nr
Match: KAG6581610.1 (ACT domain-containing protein ACR11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018110.1 ACT domain-containing protein ACR11 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 564 bits (1453), Expect = 2.30e-202 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of Csor.00g186580 vs. NCBI nr
Match: XP_022935549.1 (ACT domain-containing protein ACR11-like [Cucurbita moschata]) HSP 1 Score: 561 bits (1447), Expect = 1.89e-201 Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 0
BLAST of Csor.00g186580 vs. NCBI nr
Match: XP_023526875.1 (ACT domain-containing protein ACR11-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 560 bits (1444), Expect = 5.42e-201 Identity = 288/291 (98.97%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of Csor.00g186580 vs. NCBI nr
Match: XP_022983946.1 (ACT domain-containing protein ACR11-like [Cucurbita maxima]) HSP 1 Score: 545 bits (1404), Expect = 6.78e-195 Identity = 283/291 (97.25%), Postives = 284/291 (97.59%), Query Frame = 0
BLAST of Csor.00g186580 vs. NCBI nr
Match: XP_038904389.1 (ACT domain-containing protein ACR11 [Benincasa hispida]) HSP 1 Score: 516 bits (1329), Expect = 1.89e-183 Identity = 267/291 (91.75%), Postives = 280/291 (96.22%), Query Frame = 0
BLAST of Csor.00g186580 vs. ExPASy TrEMBL
Match: A0A6J1F5Q8 (ACT domain-containing protein ACR11-like OS=Cucurbita moschata OX=3662 GN=LOC111442390 PE=4 SV=1) HSP 1 Score: 561 bits (1447), Expect = 9.16e-202 Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 0
BLAST of Csor.00g186580 vs. ExPASy TrEMBL
Match: A0A6J1J3S9 (ACT domain-containing protein ACR11-like OS=Cucurbita maxima OX=3661 GN=LOC111482414 PE=4 SV=1) HSP 1 Score: 545 bits (1404), Expect = 3.28e-195 Identity = 283/291 (97.25%), Postives = 284/291 (97.59%), Query Frame = 0
BLAST of Csor.00g186580 vs. ExPASy TrEMBL
Match: A0A5D3DCJ2 (ACT domain-containing protein ACR11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00120 PE=4 SV=1) HSP 1 Score: 511 bits (1317), Expect = 6.17e-182 Identity = 264/291 (90.72%), Postives = 279/291 (95.88%), Query Frame = 0
BLAST of Csor.00g186580 vs. ExPASy TrEMBL
Match: A0A1S3CI34 (ACT domain-containing protein ACR11 OS=Cucumis melo OX=3656 GN=LOC103501217 PE=4 SV=1) HSP 1 Score: 511 bits (1317), Expect = 6.17e-182 Identity = 264/291 (90.72%), Postives = 279/291 (95.88%), Query Frame = 0
BLAST of Csor.00g186580 vs. ExPASy TrEMBL
Match: A0A0A0L9L1 (ACT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G710190 PE=4 SV=1) HSP 1 Score: 504 bits (1298), Expect = 4.84e-179 Identity = 261/291 (89.69%), Postives = 276/291 (94.85%), Query Frame = 0
BLAST of Csor.00g186580 vs. TAIR 10
Match: AT1G16880.1 (uridylyltransferase-related ) HSP 1 Score: 370.5 bits (950), Expect = 1.2e-102 Identity = 187/248 (75.40%), Postives = 226/248 (91.13%), Query Frame = 0
BLAST of Csor.00g186580 vs. TAIR 10
Match: AT5G04740.1 (ACT domain-containing protein ) HSP 1 Score: 276.9 bits (707), Expect = 1.8e-74 Identity = 133/232 (57.33%), Postives = 182/232 (78.45%), Query Frame = 0
BLAST of Csor.00g186580 vs. TAIR 10
Match: AT1G16880.2 (uridylyltransferase-related ) HSP 1 Score: 209.5 bits (532), Expect = 3.5e-54 Identity = 109/152 (71.71%), Postives = 134/152 (88.16%), Query Frame = 0
BLAST of Csor.00g186580 vs. TAIR 10
Match: AT5G04740.2 (ACT domain-containing protein ) HSP 1 Score: 155.2 bits (391), Expect = 7.9e-38 Identity = 70/119 (58.82%), Postives = 96/119 (80.67%), Query Frame = 0
BLAST of Csor.00g186580 vs. TAIR 10
Match: AT3G01990.1 (ACT domain repeat 6 ) HSP 1 Score: 61.6 bits (148), Expect = 1.2e-09 Identity = 45/175 (25.71%), Postives = 84/175 (48.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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