Csor.00g185260 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGGTGAACGGAGAATCGGAGTTGCAGTGGATTTCTCACTCTGCAGCAAAAAAGCACTCAAATGGACTATCGATAATGTTATCCGTAAAGGTGATTACCTAATTCTCATCACTGTTCGTCCTGAAGGCGATTATGAAGACGGCGAGATGCAGCTCTGGCAAACTACCGGATCTCGTAAGATGTTCTTCCTTCTCGATCTCGTTCTTTTATTTCTCTCATCCGATCTTCGGAGGTAGCGCAAGCGCTTGTTCGATTGCACTGAAACCTTTTTCTAATTCTCTGCAAGATTGTTGCTCTTTTCGCTGTTTGAAGAAATTCGGTTTCGGTTTTGGTTTGATTCCTTTGTTCTTGGCGATCGACGTATTTTGTAATTGTCTCTGTGTGTGTGTTTACTGTTTTGTAGCGCTTATTCCTCTGTCTGAGTTCTCCGATCCTCACACCATGAAGAAGTACGGGATTAAGCCGGATGCTGAAACTCTGGACATCGTGACGACGGCGGCCGCCCAGAAGGAGGTGATTTTTCTATCTTTATGTTTTTGTTAAGCGGTTTGTTTCAATTTCTGCGTTGATGATTGAAATTTTTCTGTAATGGAACAGATCACTGTATTGCTTAAGGTTTATTGGGGAGATGCTGGAGAGAAGATTTGTGAAGCAATTGATCAGGTTCCTATCAGCTGTCTCGTCATTGGGAACAGAGGTCTTGGCATGCTTAAGAGGTGAGATCGAATTCTCTTTCAGTTGTTTGAATCATAACTCTTAAGAATTTAGACTTCTTAAAACTGGTAATGGTTCCATATATAGAAAAATTTTGCGAAAATGTTTTTGTAAAGAGTTTATCAATCAGTCCCTGGATCTTTGCTTACAATCACTGTGATTGTGAGATCGATGTCGTTTTAAGGGTTGAGAGGGGAACTGAACATTGCTTAGGAGGGTGTTGAAACTTCTCTCTTACGTTTTAAAATTGTGAAGCCCAACGAGCCAAAGCGGGCAATATTTGTTAGATATGGGCTTGGGCATGTTACAAATGCTGGAGATGGGTTGGACAATATTTGCCAGATATGGGCTTGGGCGTGTTACAGATGCTAGAGATGGGTTGGACAATATTTGTTAGATATGAGCTTAGGCGTGTTACAGATGCGCTAGAGATGGGTTGGACAATATTTGTTAGATATGAGCTTAGGCGTGTTACAGGCAGAGATGGGTTGAGCTGTTACAAATGGTATGACAATATTTACTAGAGATGGATTCATGGGTTGGGCTGTTACAAATGGTATGACAATATTTACTAGAGATGGATTGGGCGGTTACAAATGGTACAATATTTGCTAAAGATGGATTGGACTGTTACAAATAGTATTAGAACCAGTAACTTACGGTGTGAGACACTAGTCGAAGTAGGGCTAAACCCTTTCCATAGTAGATGCATTACGGTGTGAGACACTAGTCGAAGTAGGGCTAAACCCTTTCCATAGTAGATGCATTTTAAACCTGTGAGGCTGACGGCGATATGTAACAGGCCAAGGCGGACAATATCTGTTAGCGATGGGTTTGAGTTATTACAAATGATACTAGAGGTAATAACGGGCAGTATGCCAGCAGGACGCCTGCCCCCAAGGGGATGGATTGTGAGACTCCACACCGGTTGGAGAGGGGAACGGTGTGAAAACCTCTCCCTTACCGACGACGACACGTAACATGCCAAAACAAACAATATTTACCGGTGATAAGCATAGGCCGGAGCATCGCATTTCTTAAAAAAAAATATGAAAACTACAGGTATAAATTTGAAAATTGTGGAATATTTTTACAGGGCAATATTGGGGAGTGTAAGCAACTATGTGGTGAACAATAGCTCCTGTCCAGTCACTGTGGTGAAGAAAGGAGATCATGAGCACTGA ATGGACGGTGAACGGAGAATCGGAGTTGCAGTGGATTTCTCACTCTGCAGCAAAAAAGCACTCAAATGGACTATCGATAATGTTATCCGTAAAGGTGATTACCTAATTCTCATCACTGTTCGTCCTGAAGGCGATTATGAAGACGGCGAGATGCAGCTCTGGCAAACTACCGGATCTCCGCTTATTCCTCTGTCTGAGTTCTCCGATCCTCACACCATGAAGAAGTACGGGATTAAGCCGGATGCTGAAACTCTGGACATCGTGACGACGGCGGCCGCCCAGAAGGAGATCACTGTATTGCTTAAGGTTTATTGGGGAGATGCTGGAGAGAAGATTTGTGAAGCAATTGATCAGGTTCCTATCAGCTGTCTCGTCATTGGGAACAGAGGTCTTGGCATGCTTAAGAGGGCAATATTGGGGAGTGTAAGCAACTATGTGGTGAACAATAGCTCCTGTCCAGTCACTGTGGTGAAGAAAGGAGATCATGAGCACTGA ATGGACGGTGAACGGAGAATCGGAGTTGCAGTGGATTTCTCACTCTGCAGCAAAAAAGCACTCAAATGGACTATCGATAATGTTATCCGTAAAGGTGATTACCTAATTCTCATCACTGTTCGTCCTGAAGGCGATTATGAAGACGGCGAGATGCAGCTCTGGCAAACTACCGGATCTCCGCTTATTCCTCTGTCTGAGTTCTCCGATCCTCACACCATGAAGAAGTACGGGATTAAGCCGGATGCTGAAACTCTGGACATCGTGACGACGGCGGCCGCCCAGAAGGAGATCACTGTATTGCTTAAGGTTTATTGGGGAGATGCTGGAGAGAAGATTTGTGAAGCAATTGATCAGGTTCCTATCAGCTGTCTCGTCATTGGGAACAGAGGTCTTGGCATGCTTAAGAGGGCAATATTGGGGAGTGTAAGCAACTATGTGGTGAACAATAGCTCCTGTCCAGTCACTGTGGTGAAGAAAGGAGATCATGAGCACTGA MDGERRIGVAVDFSLCSKKALKWTIDNVIRKGDYLILITVRPEGDYEDGEMQLWQTTGSPLIPLSEFSDPHTMKKYGIKPDAETLDIVTTAAAQKEITVLLKVYWGDAGEKICEAIDQVPISCLVIGNRGLGMLKRAILGSVSNYVVNNSSCPVTVVKKGDHEH Homology
BLAST of Csor.00g185260 vs. ExPASy Swiss-Prot
Match: Q8VYN9 (Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.5e-14 Identity = 55/170 (32.35%), Postives = 87/170 (51.18%), Query Frame = 0
BLAST of Csor.00g185260 vs. ExPASy Swiss-Prot
Match: Q8L4N1 (Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.8e-13 Identity = 57/171 (33.33%), Postives = 84/171 (49.12%), Query Frame = 0
BLAST of Csor.00g185260 vs. ExPASy Swiss-Prot
Match: Q8LGG8 (Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2) HSP 1 Score: 61.6 bits (148), Expect = 9.4e-09 Identity = 40/152 (26.32%), Postives = 72/152 (47.37%), Query Frame = 0
BLAST of Csor.00g185260 vs. ExPASy Swiss-Prot
Match: P87132 (Uncharacterized protein C167.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC167.05 PE=1 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 2.1e-08 Identity = 42/151 (27.81%), Postives = 72/151 (47.68%), Query Frame = 0
BLAST of Csor.00g185260 vs. ExPASy Swiss-Prot
Match: P42297 (Universal stress protein YxiE OS=Bacillus subtilis (strain 168) OX=224308 GN=yxiE PE=3 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 7.5e-06 Identity = 44/152 (28.95%), Postives = 70/152 (46.05%), Query Frame = 0
BLAST of Csor.00g185260 vs. NCBI nr
Match: KAG6582176.1 (Universal stress protein PHOS32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 338 bits (867), Expect = 2.96e-117 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of Csor.00g185260 vs. NCBI nr
Match: XP_022955721.1 (universal stress protein PHOS32-like [Cucurbita moschata]) HSP 1 Score: 337 bits (864), Expect = 8.49e-117 Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of Csor.00g185260 vs. NCBI nr
Match: XP_023527849.1 (universal stress protein PHOS32-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 335 bits (859), Expect = 4.92e-116 Identity = 162/164 (98.78%), Postives = 163/164 (99.39%), Query Frame = 0
BLAST of Csor.00g185260 vs. NCBI nr
Match: XP_022979952.1 (universal stress protein PHOS32-like [Cucurbita maxima]) HSP 1 Score: 334 bits (857), Expect = 9.92e-116 Identity = 161/164 (98.17%), Postives = 163/164 (99.39%), Query Frame = 0
BLAST of Csor.00g185260 vs. NCBI nr
Match: XP_038889373.1 (universal stress protein PHOS32 [Benincasa hispida]) HSP 1 Score: 306 bits (784), Expect = 1.35e-104 Identity = 143/164 (87.20%), Postives = 155/164 (94.51%), Query Frame = 0
BLAST of Csor.00g185260 vs. ExPASy TrEMBL
Match: A0A6J1GUM7 (universal stress protein PHOS32-like OS=Cucurbita moschata OX=3662 GN=LOC111457633 PE=4 SV=1) HSP 1 Score: 337 bits (864), Expect = 4.11e-117 Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of Csor.00g185260 vs. ExPASy TrEMBL
Match: A0A6J1IQ45 (universal stress protein PHOS32-like OS=Cucurbita maxima OX=3661 GN=LOC111479486 PE=4 SV=1) HSP 1 Score: 334 bits (857), Expect = 4.80e-116 Identity = 161/164 (98.17%), Postives = 163/164 (99.39%), Query Frame = 0
BLAST of Csor.00g185260 vs. ExPASy TrEMBL
Match: A0A5A7U1A3 (Usp domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001480 PE=4 SV=1) HSP 1 Score: 305 bits (780), Expect = 2.66e-104 Identity = 143/164 (87.20%), Postives = 154/164 (93.90%), Query Frame = 0
BLAST of Csor.00g185260 vs. ExPASy TrEMBL
Match: A0A1S3AY78 (uncharacterized protein C167.05 OS=Cucumis melo OX=3656 GN=LOC103483889 PE=4 SV=1) HSP 1 Score: 305 bits (780), Expect = 2.66e-104 Identity = 143/164 (87.20%), Postives = 154/164 (93.90%), Query Frame = 0
BLAST of Csor.00g185260 vs. ExPASy TrEMBL
Match: A0A0A0L5W7 (Universal stress protein OS=Cucumis sativus OX=3659 GN=Csa_3G166280 PE=4 SV=1) HSP 1 Score: 301 bits (771), Expect = 6.26e-103 Identity = 142/164 (86.59%), Postives = 153/164 (93.29%), Query Frame = 0
BLAST of Csor.00g185260 vs. TAIR 10
Match: AT3G17020.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 237.7 bits (605), Expect = 6.8e-63 Identity = 111/156 (71.15%), Postives = 131/156 (83.97%), Query Frame = 0
BLAST of Csor.00g185260 vs. TAIR 10
Match: AT3G53990.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 164.5 bits (415), Expect = 7.4e-41 Identity = 77/162 (47.53%), Postives = 112/162 (69.14%), Query Frame = 0
BLAST of Csor.00g185260 vs. TAIR 10
Match: AT3G03270.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 162.5 bits (410), Expect = 2.8e-40 Identity = 75/158 (47.47%), Postives = 112/158 (70.89%), Query Frame = 0
BLAST of Csor.00g185260 vs. TAIR 10
Match: AT3G03270.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 130.2 bits (326), Expect = 1.5e-30 Identity = 59/136 (43.38%), Postives = 92/136 (67.65%), Query Frame = 0
BLAST of Csor.00g185260 vs. TAIR 10
Match: AT3G53990.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 97.1 bits (240), Expect = 1.4e-20 Identity = 47/100 (47.00%), Postives = 65/100 (65.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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