Csor.00g184170 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATTTGTGGAATCCCTCTAACCCTAAATCACTACCATTGTCCCTCCAATTTCGACTCCAAAGTACGTGCCACCATGTTGTTCATAAATCTATTACAAGGGGTCGAACCATCGAAATTTGTAATGATATCATATAGATGAGATTCGAGTCGAGTCGACGACAATGTAATTAGAAATATTGAAAAGTGTAGGGACCAGATGTGCAACAAAAGCTATAATTTAATTATTTAAAAAAATAATAAATTAAAAGGAATAATGGGTATTTAGGAAATGAATTTTCAAAGGGGGGGGGGGGCTGACATTCTTGTTTGGACGGCAACAAAAGGAAGTGGTGTTGACTCTTTAAAGGCATGTGAATCGTACTCCCAATATTAAATTTAATTTAAAATTAAATATAAATTTAAGAAGAAAATGAGTTTTTTTTTTTATTTAAATGTTTTTTTTTTAAATAAAATCTAAATAAATGCAGCGAAGGAGAATTAAGGGAAATCACTGTCAGTCAACAAATATTTGGGAGAATCTTTTAATGTTTCCTGCCCTTTTTGTTTTGTTCTCTTTCCTTTGGAAGCTTCTCACACAAAAGCTGGTAATTTTTTGGACCAACATGCCCTTTCCTTTTTTATTTTTTTTTCCCTCTCATAAATCAAATAAATAATATATATATATATTTTACTCACGATGGTGTTGGGTCATATCGATTGAGAACCAATTGACAAGATGAGATGCGACGTTGTATTAAAAGATCTTTATCTCGAGTAGAGGTAAGGTCGAACCAAATGACTTGGCCTAGTCTCGTAGACAATTGAACATGGTGATCAAGTGGATATTCTTAAGTGGTGTGATCAAAATCAACGCTTGAAGCGATTTAGTAGCGGCGACTAAATGAGGATGTTCTTAAGACGTTGAGTTGCCCTTTCAGGAGTGTATCAAGATCATGATGAATCCATACGAAAAAGACTTTCAAAAAGTTTGGTTTATAAAAGATACCCAAAACTTAGAAAGAATTTCATTTTAACCCACTTGGTATTATTTAACATCAAAATGGTGTGGATTTGTACTGTAAGGCAGTGTTTGGGCGTACTGAGGATTATATAATTAAAGTGGAATGAATAGGCGTGGGCCCCACCACTCACTACCTCCCTCCGCCACTTTTTTGGACTATAAATTCACGCCCATCTTCCCCAACCCTCCTCACTTTATATCCCTCTCATCAACAAAATTTCTTCAACTTCCTTCACTCTCAAAGAATGGCAACAATGGTGTGTCGAAGCCCTCAGCCCTGCGTCGATTCTCAGTTCATCCAAACAACTTGGTCTCTTATGGCCTCCTCACCTCACATCAAAATTAAATGCTCAACCTCCTCCGCCTTTCCGATCCGCTTTCAAATCCGTTTTTCTCGATCTCGATTGTGTCGAATCTGTACACGAATGCGACGAATCAAATCGGATTGTTCTCACTCGCAACGCTAATTACTCTGTTCTTCTTTCTTCTAACGGTCCGAAGAAATCCGATTCCCGCGGTGAAGAGAAATCCGCAGTGGCGATTAAGGATTTAGATCCTGACTACGTTCATCCACTCGTTAAGCGCTCTCGCTCCACTCTGAGCGAGAAGAGTCTGGCGCTCTGTACTGAAAATTTAGGAAACGAGACTGGAGCGGATTTTGTCGAGGACGCTATTTTCTCCGATCTGAAAGTCGAACGGTCTCCAACGAGGAAGCGAGTGAAATCGAATGATAATCAAGGTAACAAGAAACTATTTCCACCGCCTTTGACGACAATCGCCGGTGTAGATTCGATTCGCGTACGGTCTTACCGCGAAACGGAAGGTTGA ATGCATTTGTGGAATCCCTCTAACCCTAAATCACTACCATTGTCCCTCCAATTTCGACTCCAAAAATGGCAACAATGGTGTGTCGAAGCCCTCAGCCCTGCGTCGATTCTCAGTTCATCCAAACAACTTGGTCTCTTATGGCCTCCTCACCTCACATCAAAATTAAATGCTCAACCTCCTCCGCCTTTCCGATCCGCTTTCAAATCCGTTTTTCTCGATCTCGATTGTGTCGAATCTGTACACGAATGCGACGAATCAAATCGGATTGTTCTCACTCGCAACGCTAATTACTCTGTTCTTCTTTCTTCTAACGGTCCGAAGAAATCCGATTCCCGCGGTGAAGAGAAATCCGCAGTGGCGATTAAGGATTTAGATCCTGACTACGTTCATCCACTCGTTAAGCGCTCTCGCTCCACTCTGAGCGAGAAGAGTCTGGCGCTCTGTACTGAAAATTTAGGAAACGAGACTGGAGCGGATTTTGTCGAGGACGCTATTTTCTCCGATCTGAAAGTCGAACGGTCTCCAACGAGGAAGCGAGTGAAATCGAATGATAATCAAGGTAACAAGAAACTATTTCCACCGCCTTTGACGACAATCGCCGGTGTAGATTCGATTCGCGTACGGTCTTACCGCGAAACGGAAGGTTGA ATGCATTTGTGGAATCCCTCTAACCCTAAATCACTACCATTGTCCCTCCAATTTCGACTCCAAAAATGGCAACAATGGTGTGTCGAAGCCCTCAGCCCTGCGTCGATTCTCAGTTCATCCAAACAACTTGGTCTCTTATGGCCTCCTCACCTCACATCAAAATTAAATGCTCAACCTCCTCCGCCTTTCCGATCCGCTTTCAAATCCGTTTTTCTCGATCTCGATTGTGTCGAATCTGTACACGAATGCGACGAATCAAATCGGATTGTTCTCACTCGCAACGCTAATTACTCTGTTCTTCTTTCTTCTAACGGTCCGAAGAAATCCGATTCCCGCGGTGAAGAGAAATCCGCAGTGGCGATTAAGGATTTAGATCCTGACTACGTTCATCCACTCGTTAAGCGCTCTCGCTCCACTCTGAGCGAGAAGAGTCTGGCGCTCTGTACTGAAAATTTAGGAAACGAGACTGGAGCGGATTTTGTCGAGGACGCTATTTTCTCCGATCTGAAAGTCGAACGGTCTCCAACGAGGAAGCGAGTGAAATCGAATGATAATCAAGGTAACAAGAAACTATTTCCACCGCCTTTGACGACAATCGCCGGTGTAGATTCGATTCGCGTACGGTCTTACCGCGAAACGGAAGGTTGA MHLWNPSNPKSLPLSLQFRLQKWQQWCVEALSPASILSSSKQLGLLWPPHLTSKLNAQPPPPFRSAFKSVFLDLDCVESVHECDESNRIVLTRNANYSVLLSSNGPKKSDSRGEEKSAVAIKDLDPDYVHPLVKRSRSTLSEKSLALCTENLGNETGADFVEDAIFSDLKVERSPTRKRVKSNDNQGNKKLFPPPLTTIAGVDSIRVRSYRETEG Homology
BLAST of Csor.00g184170 vs. ExPASy Swiss-Prot
Match: Q9SFG6 (Protein FANTASTIC FOUR 4 OS=Arabidopsis thaliana OX=3702 GN=FAF4 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 3.9e-10 Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 0
BLAST of Csor.00g184170 vs. ExPASy Swiss-Prot
Match: Q6NMR8 (Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana OX=3702 GN=FAF3 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 6.1e-08 Identity = 55/176 (31.25%), Postives = 86/176 (48.86%), Query Frame = 0
BLAST of Csor.00g184170 vs. ExPASy Swiss-Prot
Match: Q8GXU9 (Protein FANTASTIC FOUR 2 OS=Arabidopsis thaliana OX=3702 GN=FAF2 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.4e-06 Identity = 32/91 (35.16%), Postives = 46/91 (50.55%), Query Frame = 0
BLAST of Csor.00g184170 vs. ExPASy Swiss-Prot
Match: Q0V865 (Protein FAF-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g22090 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.4e-06 Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 0
BLAST of Csor.00g184170 vs. ExPASy Swiss-Prot
Match: Q9SY06 (Protein FANTASTIC FOUR 1 OS=Arabidopsis thaliana OX=3702 GN=FAF1 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 7.5e-06 Identity = 33/91 (36.26%), Postives = 53/91 (58.24%), Query Frame = 0
BLAST of Csor.00g184170 vs. NCBI nr
Match: KAG6582283.1 (Protein FANTASTIC FOUR 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 434 bits (1117), Expect = 1.10e-153 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of Csor.00g184170 vs. NCBI nr
Match: XP_023528522.1 (protein FANTASTIC FOUR 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 317 bits (812), Expect = 1.26e-105 Identity = 160/164 (97.56%), Postives = 162/164 (98.78%), Query Frame = 0
BLAST of Csor.00g184170 vs. NCBI nr
Match: XP_022955978.1 (protein FANTASTIC FOUR 3-like [Cucurbita moschata] >KAG7018688.1 Protein FANTASTIC FOUR 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 315 bits (807), Expect = 7.02e-105 Identity = 160/164 (97.56%), Postives = 161/164 (98.17%), Query Frame = 0
BLAST of Csor.00g184170 vs. NCBI nr
Match: XP_022979619.1 (protein FANTASTIC FOUR 3-like [Cucurbita maxima]) HSP 1 Score: 313 bits (802), Expect = 4.31e-104 Identity = 158/164 (96.34%), Postives = 161/164 (98.17%), Query Frame = 0
BLAST of Csor.00g184170 vs. NCBI nr
Match: KAG7028918.1 (Protein FANTASTIC FOUR 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 207 bits (526), Expect = 2.62e-62 Identity = 125/193 (64.77%), Postives = 143/193 (74.09%), Query Frame = 0
BLAST of Csor.00g184170 vs. ExPASy TrEMBL
Match: A0A6J1GVH7 (protein FANTASTIC FOUR 3-like OS=Cucurbita moschata OX=3662 GN=LOC111457812 PE=3 SV=1) HSP 1 Score: 315 bits (807), Expect = 3.40e-105 Identity = 160/164 (97.56%), Postives = 161/164 (98.17%), Query Frame = 0
BLAST of Csor.00g184170 vs. ExPASy TrEMBL
Match: A0A6J1IX38 (protein FANTASTIC FOUR 3-like OS=Cucurbita maxima OX=3661 GN=LOC111479294 PE=3 SV=1) HSP 1 Score: 313 bits (802), Expect = 2.09e-104 Identity = 158/164 (96.34%), Postives = 161/164 (98.17%), Query Frame = 0
BLAST of Csor.00g184170 vs. ExPASy TrEMBL
Match: A0A6J1F0P3 (protein FAF-like, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441084 PE=3 SV=1) HSP 1 Score: 203 bits (517), Expect = 2.87e-61 Identity = 123/193 (63.73%), Postives = 142/193 (73.58%), Query Frame = 0
BLAST of Csor.00g184170 vs. ExPASy TrEMBL
Match: A0A6J1I8I4 (protein FANTASTIC FOUR 2-like OS=Cucurbita maxima OX=3661 GN=LOC111472357 PE=3 SV=1) HSP 1 Score: 203 bits (516), Expect = 3.95e-61 Identity = 122/193 (63.21%), Postives = 143/193 (74.09%), Query Frame = 0
BLAST of Csor.00g184170 vs. ExPASy TrEMBL
Match: A0A0A0L8T9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149380 PE=3 SV=1) HSP 1 Score: 180 bits (457), Expect = 3.66e-52 Identity = 103/178 (57.87%), Postives = 121/178 (67.98%), Query Frame = 0
BLAST of Csor.00g184170 vs. TAIR 10
Match: AT3G06020.1 (Protein of unknown function (DUF3049) ) HSP 1 Score: 66.6 bits (161), Expect = 2.7e-11 Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 0
BLAST of Csor.00g184170 vs. TAIR 10
Match: AT5G19260.1 (Protein of unknown function (DUF3049) ) HSP 1 Score: 59.3 bits (142), Expect = 4.4e-09 Identity = 55/176 (31.25%), Postives = 86/176 (48.86%), Query Frame = 0
BLAST of Csor.00g184170 vs. TAIR 10
Match: AT1G03170.1 (Protein of unknown function (DUF3049) ) HSP 1 Score: 53.5 bits (127), Expect = 2.4e-07 Identity = 32/91 (35.16%), Postives = 46/91 (50.55%), Query Frame = 0
BLAST of Csor.00g184170 vs. TAIR 10
Match: AT5G22090.1 (Protein of unknown function (DUF3049) ) HSP 1 Score: 53.5 bits (127), Expect = 2.4e-07 Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 0
BLAST of Csor.00g184170 vs. TAIR 10
Match: AT5G22090.2 (Protein of unknown function (DUF3049) ) HSP 1 Score: 53.5 bits (127), Expect = 2.4e-07 Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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