Csor.00g182260 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g182260
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 15643748 .. 15645973 (+)
RNA-Seq ExpressionCsor.00g182260
SyntenyCsor.00g182260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGCAAAATGGTAAATTTCAAAAGTTATTCTTGCATTAAAGCCACCGACGCTACTTACCTCGACCTTTTTTCGGGAATATACCAAAGTGTTGCTCGAATTTGTGTTGGTCGTTGAAAACTGTCAACAAGTATTCGCGGAGTGATATTTCATTGTTACTTTTAAAGATTTATCGATTAACACAAAATTCATTACCTTTCTCATCATTGTCTCTCTACCGAGGAAGGAGAATCTTTGTCTTGTCAGGTACCTTTGTGTTAAAGGTCGTTCGAGTTTTTTTTAGGAGTATGACATGGATTACTTCAACGTCATAGCACTTGGTACTCGAACATTGACTCGAGGTATTTTCTCTGCCCTTTCTTACCATGAAAAAACAGGGGCACCTTGCGTCTTTGAGCCGATAACCATCATTCGGCTAACCTAGCCTCCTCTGTCCCTCGGGACCAATAAAGGGTAATACAGGAATATTCACCGAAGCAAAGTCCCCACGAGATTGACATCTCTTAGATGCCCGTGCCAATAGAAGCTTAATTGAAAAAGGTCAACATCTTTTTAACTGTTGTGCTTTTCTTTAAATAATTTATAAGGCATCGATAGACCGTTTTAGTCCGGACAATAATAATATTTGGTTAATGCTATTTTAAAAATTTCATTCATTTTTTAAATATAGTTTTAATATAAATAAAAATATTTTTGAAATAAAATATTAATTATATATATATAAAAATACAAAATTTATGTATATATATTTATTTATTAAAGTTAAGATATTTAAAGCATAAGCATTTAGGATTATAGGTGAGCAGAGCTGCTCTGTTGTCAAAGAAACCCATAATGGCATCTCCACTTTAGACCAAAGCGAAACCAGTTCCATTTGTCTTCTCTCCGTTGCTTTTTTGTTTCCTATTTCCTCCGCCGAACTTCAGACGAGCTTTCTTCTCAGTGTTTCCATGGAAGATTCATCTGGTGAGTACAGCTTTCTTTTTCTTCAGAGTCCATGTTGTCTCTTTCGCTCAGTCTTTTTGTTCTTGCTACTCGATGCTCATTCAATTCATCGCAGAGGAACAGACGGAGTATTTTATTTTTTTTTTGTATATTTTGCAGTACTTCCGCGTAAAAGAATTTAATCTGTTCGTCGTCTTGGAGTCTATTTTGTGTGAAATTATCTATGTAAGTTCTGTATTTTGTTGTGTGTTGAAACAGAATTATTTGCCTTAGTTGAATGTTGCGCGTCGTTTGCGTCGATTTATTTGTTAATCGTGCCGATTGACGGTGCAATCTAGGGGTTAAATTTGATGTTCAATAGCATTCTGAATGATTTCTTTGGGATTACGTTAAGTTAATCTTGGAATTTGTTGTGAACATGAGTATCTGGTCGAAACCTCGAACTGAAATTGTATAGCAGGGTTGTTCACAATCGATAGGGCAAACGTCTGAGAGTAAGAAACACGCAAAAGGATAGATAGCTAGAAATTTGGAAAGAAGGCGATTTACAAGCGATGTAGGTAGTCTATAATTTGGAGGGAAATCTCGTGTCTGAGGCTTTGGGAAAGGATGGATTACTGGATTTTTCTTTCTCTCATTAGAATGTATTGATGCAATCCTACTCTTTTTCGTTTTTTGTTTTAATTTATTAAACAACAACCAGGAAGAAACTTTGGAGAGCATATCCGAAGTACGTATCCACGTTTCAAGTGGATGGGAAGTAGTGATGATCATAAGAGATACTTCAGAAATGTTTGCATATATAGCATTCCTTTTCCATTTTCATAGACAAGCAACAGTTAATGGTGCAACTTGTATTGTTCTTAGGATGCTCAGTTCCTTGCTATCACAAATCTTCCCAAAAGCTTAAGCTAATGGGTTATGGTCAATTTAATTACGTAAATCACTCTCTCACGTGTTGGCTTCAAAATTTGTAGAACGTAAGTGGAAATCAATATTAATTGGGGAGGAAATATCATTATAGGAGTTCAAACACAAGATTTCCTGCTCTGATATCATGTTAAATCATCAATCAACCCAAAAGTTTAAGCGGATAGATTATGGTAAATTCAATATATCATTACTTTAGGAAACCCTAAATGCTTATTTTCCATTCTCAAGTCTTTTTTTTGGCTGTTTGACAACTTCTGGAATTGCTATTTTGTTCATAGGATATGCTGATTTTGTTTTCATTTGACTTGTCAGGCACACATTGATTTTCTCTATCTTTTACTCTAA

mRNA sequence

ATGGAGGGCAAAATGACCAAAGCGAAACCAGTTCCATTTGTCTTCTCTCCGTTGCTTTTTTGTTTCCTATTTCCTCCGCCGAACTTCAGACGAGCTTTCTTCTCAGTGTTTCCATGGAAGATTCATCTGTACTTCCGCGTAAAAGAATTTAATCTGTTCGTCGTCTTGGAGTCTATTTTGTGTGAAATTATCTATGCACACATTGATTTTCTCTATCTTTTACTCTAA

Coding sequence (CDS)

ATGGAGGGCAAAATGACCAAAGCGAAACCAGTTCCATTTGTCTTCTCTCCGTTGCTTTTTTGTTTCCTATTTCCTCCGCCGAACTTCAGACGAGCTTTCTTCTCAGTGTTTCCATGGAAGATTCATCTGTACTTCCGCGTAAAAGAATTTAATCTGTTCGTCGTCTTGGAGTCTATTTTGTGTGAAATTATCTATGCACACATTGATTTTCTCTATCTTTTACTCTAA

Protein sequence

MEGKMTKAKPVPFVFSPLLFCFLFPPPNFRRAFFSVFPWKIHLYFRVKEFNLFVVLESILCEIIYAHIDFLYLLL
Homology
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BLAST of Csor.00g182260 vs. NCBI nr
Match: KAG6582473.1 (hypothetical protein SDJN03_22475, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152 bits (385), Expect = 1.40e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MEGKMTKAKPVPFVFSPLLFCFLFPPPNFRRAFFSVFPWKIHLYFRVKEFNLFVVLESIL 60
          MEGKMTKAKPVPFVFSPLLFCFLFPPPNFRRAFFSVFPWKIHLYFRVKEFNLFVVLESIL
Sbjct: 1  MEGKMTKAKPVPFVFSPLLFCFLFPPPNFRRAFFSVFPWKIHLYFRVKEFNLFVVLESIL 60

Query: 61 CEIIYAHIDFLYLLL 75
          CEIIYAHIDFLYLLL
Sbjct: 61 CEIIYAHIDFLYLLL 75

The following BLAST results are available for this feature:
BLAST of Csor.00g182260 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g182260 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6582473.11.40e-46100.00hypothetical protein SDJN03_22475, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g182260 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g182260 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g182260.m01Csor.00g182260.m01mRNA