Csor.00g181090 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATTTGGGGATGGAGAATTAGGGTTTCCTGAGAGGGAAGAAAGTGACCGTACTTGTTACGGAAGAACGCTTGTAGGTGTGTGTCAGTCTCTCGCTTATGTAGCAGCAAAATTTCTACTCTCCCGACAGGCCATCGGACGGGGGAGAGACGGGGAGTTCGGATGCCACGTGCGATGCGATAGTCTCACGTGTTCAATAACGACGTCGTTTCATCCCTTAAATCTCATCTCAATTTTAACCTATAAAATTATCAATTTATTTCGAAGGCGTTGCCGAATCAAGAAGCGGTCGAAACCTTCACGAGATTCACCGGCGCTTCCGAGTCTCTCGCCATGCGTAAGCTCGAGGTCCACTCTCCGTTGGAGTAACACTGCAGCACTTGAATTTTGTGTTGGTTTGTCGTTTTAATTTTCAGGTTTTCAAATTTCAACCACGACATGTATTTTTACTGATTGTTGATGAAATTTTAGCATTCGAAGTACTGAATGAACACATTCACAGTAACATCCGAATGATTGATCCGAGTTTCGCATCTAATTATTGATGATCAGGCAAGGCCATATCGAAGGTGTACTTTTGGAGTTGAAGATGGTTCGATGATGTTGAGAGATCTCGGCCTCACCGGCAAGCAAGAAGCCTTGTTTGTGGAGTTAATATGGTATAATATCTTCCACCAAACACTTTTGAATTGA ATGGAATTTGGGGATGGAGAATTAGGGTTTCCTGAGAGGGAAGAAAGTGACCGTACTTGTTACGGAAGAACGCTTGTAGGTGTGTGTCAGTCTCTCGCTTATGTAGCAGCAAAATTTCTACTCTCCCGACAGGCCATCGGACGGGGGAGAGACGGGGAGTTCGGATGCCACCACTTGAATTTTGTGTTGGTTTGTCGTTTTAATTTTCAGGCAAGGCCATATCGAAGGTGTACTTTTGGAGTTGAAGATGGTTCGATGATGTTGAGAGATCTCGGCCTCACCGGCAAGCAAGAAGCCTTGTTTGTGGAGTTAATATGGTATAATATCTTCCACCAAACACTTTTGAATTGA ATGGAATTTGGGGATGGAGAATTAGGGTTTCCTGAGAGGGAAGAAAGTGACCGTACTTGTTACGGAAGAACGCTTGTAGGTGTGTGTCAGTCTCTCGCTTATGTAGCAGCAAAATTTCTACTCTCCCGACAGGCCATCGGACGGGGGAGAGACGGGGAGTTCGGATGCCACCACTTGAATTTTGTGTTGGTTTGTCGTTTTAATTTTCAGGCAAGGCCATATCGAAGGTGTACTTTTGGAGTTGAAGATGGTTCGATGATGTTGAGAGATCTCGGCCTCACCGGCAAGCAAGAAGCCTTGTTTGTGGAGTTAATATGGTATAATATCTTCCACCAAACACTTTTGAATTGA MEFGDGELGFPEREESDRTCYGRTLVGVCQSLAYVAAKFLLSRQAIGRGRDGEFGCHHLNFVLVCRFNFQARPYRRCTFGVEDGSMMLRDLGLTGKQEALFVELIWYNIFHQTLLN Homology
BLAST of Csor.00g181090 vs. ExPASy Swiss-Prot
Match: Q4V3D3 (Plant UBX domain-containing protein 9 OS=Arabidopsis thaliana OX=3702 GN=PUX9 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 6.5e-04 Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 0
BLAST of Csor.00g181090 vs. NCBI nr
Match: KAG6582589.1 (hypothetical protein SDJN03_22591, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 250 bits (638), Expect = 6.83e-84 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Csor.00g181090 vs. NCBI nr
Match: KAG7018973.1 (hypothetical protein SDJN02_20850, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 175 bits (443), Expect = 1.73e-52 Identity = 93/122 (76.23%), Postives = 94/122 (77.05%), Query Frame = 0
BLAST of Csor.00g181090 vs. NCBI nr
Match: XP_038883756.1 (plant UBX domain-containing protein 9 [Benincasa hispida]) HSP 1 Score: 73.6 bits (179), Expect = 2.01e-12 Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 0
BLAST of Csor.00g181090 vs. NCBI nr
Match: XP_008438091.1 (PREDICTED: plant UBX domain-containing protein 9 [Cucumis melo] >KAA0048994.1 plant UBX domain-containing protein 9 [Cucumis melo var. makuwa]) HSP 1 Score: 73.6 bits (179), Expect = 2.01e-12 Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 0
BLAST of Csor.00g181090 vs. NCBI nr
Match: XP_004133881.1 (plant UBX domain-containing protein 9 [Cucumis sativus] >KGN56549.1 hypothetical protein Csa_010232 [Cucumis sativus]) HSP 1 Score: 73.6 bits (179), Expect = 2.01e-12 Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 0
BLAST of Csor.00g181090 vs. ExPASy TrEMBL
Match: A0A5A7U110 (Plant UBX domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G002180 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 9.71e-13 Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 0
BLAST of Csor.00g181090 vs. ExPASy TrEMBL
Match: A0A0A0L6B8 (UBX domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G123710 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 9.71e-13 Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 0
BLAST of Csor.00g181090 vs. ExPASy TrEMBL
Match: A0A1S3AVM3 (plant UBX domain-containing protein 9 OS=Cucumis melo OX=3656 GN=LOC103483304 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 9.71e-13 Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 0
BLAST of Csor.00g181090 vs. ExPASy TrEMBL
Match: A0A5D3D1S6 (Plant UBX domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004400 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 6.35e-12 Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 0
BLAST of Csor.00g181090 vs. ExPASy TrEMBL
Match: A0A6J1FHX0 (plant UBX domain-containing protein 9 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445577 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 7.72e-11 Identity = 39/72 (54.17%), Postives = 42/72 (58.33%), Query Frame = 0
BLAST of Csor.00g181090 vs. TAIR 10
Match: AT4G00752.1 (UBX domain-containing protein ) HSP 1 Score: 45.1 bits (105), Expect = 4.6e-05 Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 0
BLAST of Csor.00g181090 vs. TAIR 10
Match: AT4G11740.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 44.3 bits (103), Expect = 7.8e-05 Identity = 21/34 (61.76%), Postives = 23/34 (67.65%), Query Frame = 0
BLAST of Csor.00g181090 vs. TAIR 10
Match: AT4G23040.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 43.9 bits (102), Expect = 1.0e-04 Identity = 21/34 (61.76%), Postives = 24/34 (70.59%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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