Csor.00g181000 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g181000
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	GATA type zinc finger transcription factor family protein
Location	Csor_Chr14: 16342949 .. 16344023 (+)
RNA-Seq Expression	Csor.00g181000
Synteny	Csor.00g181000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTCACTGGAACATTGGACAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAGTTGCTTTCCCTTGAAGGCAATCCTTACCATAAGTCTTGCTTCAAATGTAGCCACTGCAAAGGCACCCTTTCCGTACGTCTCGATTTACACGTTTCGTTCTTCTTTTTTCGTTTCATATGATCAATCTTTGACCCGAGTTGTCTTTCACGATAGATGAGTAGCTACTCATGGATGGACGGTGTCCTGTATTGCAAGCCTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAACTTGTAATGTTTTTTCTTTTCCATCTCTTATCATTTTACCTATTTCTCTATCATTCTCTCATTCTCATTATATTTTTGGCAACAGCCAAGCCTTCCGAGAAGCAAAATGATATGGTATGTTCCCATTCTTGACCGATCCATAACGATTTGAAACGTGATATATTGCAGTACTGTCAAGAATCGTTATTTCTCAAGATCACTCCCGAACATACTTGAAAGCATGAGATATCTTCTTTAATTCATGTTTTAGTTTACTATCGAATGCAATTCCGATATTAATAACGTAGCTCGGTAACTTTCAAAATGTGTAGCAATCAAGGGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGCTCGGCCTGCTCGAAGACGGTTTATCCATTGGAGAAGGTGTATAGTTCTTCATTTGGTTTTGTTTTGTTTTGTTGAATTATAGGTAGAATGTTAGTAGATTTGTTGGATAATTAAAAGTATGGTTCAGGTGACTCTTGAGGGGGAATGTTACCATAAGAATTGCTTCAGGTGTGCTCATGGTGGGTGCAATTTGACACACTCCTCTTATGCTGCTCTTGATGGAGTGTTGTACTGCAAGCATCATTTTGCTCAGCTCTTCATGATCAAGGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAGGCCACCACGCCGCCGCCCGAATCAGCTGAGGAAGACGAGGCCAAGGGCGATGCCGAAGCTGAGGAAGGGGCTGTAGAAACTTAA

mRNA sequence

ATGTCATTCACTGGAACATTGGACAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAGTTGCTTTCCCTTGAAGGCAATCCTTACCATAAGTCTTGCTTCAAATGTAGCCACTGCAAAGGCACCCTTTCCATGAGTAGCTACTCATGGATGGACGGTGTCCTGTATTGCAAGCCTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAACTTCCAAGCCTTCCGAGAAGCAAAATGATATGCAATCAAGGGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGCTCGGCCTGCTCGAAGACGGTTTATCCATTGGAGAAGGTGACTCTTGAGGGGGAATGTTACCATAAGAATTGCTTCAGGTGTGCTCATGGTGGGTGCAATTTGACACACTCCTCTTATGCTGCTCTTGATGGAGTGTTGTACTGCAAGCATCATTTTGCTCAGCTCTTCATGATCAAGGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAGGCCACCACGCCGCCGCCCGAATCAGCTGAGGAAGACGAGGCCAAGGGCGATGCCGAAGCTGAGGAAGGGGCTGTAGAAACTTAA

Coding sequence (CDS)

ATGTCATTCACTGGAACATTGGACAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAGTTGCTTTCCCTTGAAGGCAATCCTTACCATAAGTCTTGCTTCAAATGTAGCCACTGCAAAGGCACCCTTTCCATGAGTAGCTACTCATGGATGGACGGTGTCCTGTATTGCAAGCCTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAACTTCCAAGCCTTCCGAGAAGCAAAATGATATGCAATCAAGGGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGCTCGGCCTGCTCGAAGACGGTTTATCCATTGGAGAAGGTGACTCTTGAGGGGGAATGTTACCATAAGAATTGCTTCAGGTGTGCTCATGGTGGGTGCAATTTGACACACTCCTCTTATGCTGCTCTTGATGGAGTGTTGTACTGCAAGCATCATTTTGCTCAGCTCTTCATGATCAAGGGCAACTACAACCATGTCCTTGAAGCTGCTGCAAACAAGAAGGCCACCACGCCGCCGCCCGAATCAGCTGAGGAAGACGAGGCCAAGGGCGATGCCGAAGCTGAGGAAGGGGCTGTAGAAACTTAA

Protein sequence

MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPHFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKVTLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKATTPPPESAEEDEAKGDAEAEEGAVET

Homology

[Close]

BLAST of Csor.00g181000 vs. ExPASy Swiss-Prot
Match: Q500W4 (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.2e-80
Identity = 148/209 (70.81%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 2   SFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPH 61
           +FTGT DKCKACDKTVYV++L++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCK H
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKVT 121
           FEQLFKESGNFSKNFQT+  +EK ND  ++AP++LSS FSGTQDKC+AC KTVYPLEK+T
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSND-ATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMT 122

Query: 122 LEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 181
           +EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + 
Sbjct: 123 MEGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRR 182

Query: 182 TTPPPESAE--EDEAK------GDAEAEE 203
           +T   +  E  EDEA        DA AEE
Sbjct: 183 STAEEDKTEPKEDEANPTEEETSDAAAEE 210

[Close]

BLAST of Csor.00g181000 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 3.4e-80
Identity = 145/208 (69.71%), Postives = 168/208 (80.77%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYV++LL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGN+SKNFQ  K +EK ND  +R PSKLSS FSGTQDKC+ C KTVYPLEKV
Sbjct: 61  HFEQLFKESGNYSKNFQAGK-TEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           T+EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN +
Sbjct: 121 TMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHR 180

Query: 181 ------ATTPPPESAEEDEAKGDAEAEE 203
                   +PP +  + D+     EA+E
Sbjct: 181 RSASSGGASPPSDDHKPDDTASIPEAKE 207

[Close]

BLAST of Csor.00g181000 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 3.8e-79
Identity = 142/210 (67.62%), Postives = 167/210 (79.52%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKC  CDKTVYVV++LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ   P + +    +R PSK+SS+F GTQDKC+AC KTVYPLEK+
Sbjct: 61  HFEQLFKESGNFSKNFQ---PGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKI 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
            +EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+AA +++
Sbjct: 121 QMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRR 180

Query: 181 ---ATTPPPESAEEDEAKGDAEAEEGAVET 208
                T PPE  E  +   +A+ E G  E+
Sbjct: 181 TASGNTLPPEPTE--DVAVEAKEENGVSES 205

[Close]

BLAST of Csor.00g181000 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 9.9e-72
Identity = 122/191 (63.87%), Postives = 160/191 (83.77%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT  KC+AC+KTVY VELLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKP-SEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ +KP ++K     +R PS+L+ MFSGTQDKC+ C+KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAAN 180
           KVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KKATTPPPESA 190
           K+AT     +A
Sbjct: 181 KRATAAATAAA 191

[Close]

BLAST of Csor.00g181000 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.9e-70
Identity = 118/182 (64.84%), Postives = 154/182 (84.62%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT  KCKAC+KTVY VELLS +G  YHKSCFKC+HCK  L +SSYS M+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+ +K ++K     +R PS+++  FSGTQ+KC+ CSKTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANK 180
           VT+E + YHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 KA 182
           ++
Sbjct: 181 RS 182

[Close]

BLAST of Csor.00g181000 vs. NCBI nr
Match: KAG6582598.1 (LIM domain-containing protein PLIM2c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018982.1 LIM domain-containing protein PLIM2c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 427 bits (1097), Expect = 6.65e-151
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDEAKGDAEAEEGAVET 207
           ATTPPPESAEEDEAKGDAEAEEGAVET
Sbjct: 181 ATTPPPESAEEDEAKGDAEAEEGAVET 207

[Close]

BLAST of Csor.00g181000 vs. NCBI nr
Match: XP_022980412.1 (LIM domain-containing protein PLIM2c-like [Cucurbita maxima])

HSP 1 Score: 417 bits (1073), Expect = 3.26e-147
Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHK CFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDEAKGDAEA--EEGAVET 207
           ATTPPPESAEEDEAKG+AEA  EEGAVET
Sbjct: 181 ATTPPPESAEEDEAKGNAEAQSEEGAVET 209

[Close]

BLAST of Csor.00g181000 vs. NCBI nr
Match: XP_022924376.1 (LIM domain-containing protein PLIM2c-like [Cucurbita moschata])

HSP 1 Score: 417 bits (1072), Expect = 4.64e-147
Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDEAKGDAEA--EEGAVET 207
           ATTPPPESAEEDEAKG+AEA  EEGA ET
Sbjct: 181 ATTPPPESAEEDEAKGNAEAQSEEGAGET 209

[Close]

BLAST of Csor.00g181000 vs. NCBI nr
Match: XP_023528481.1 (LIM domain-containing protein PLIM2c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 413 bits (1062), Expect = 1.55e-145
Identity = 203/209 (97.13%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSAC+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDEAKGDAEA--EEGAVET 207
           ATTPPPES EEDEAKGDAEA  EEGA ET
Sbjct: 181 ATTPPPESVEEDEAKGDAEAQSEEGAGET 209

[Close]

BLAST of Csor.00g181000 vs. NCBI nr
Match: XP_004134333.3 (LIM domain-containing protein PLIM2b isoform X1 [Cucumis sativus] >KAE8650257.1 hypothetical protein Csa_009827 [Cucumis sativus])

HSP 1 Score: 389 bits (998), Expect = 9.22e-136
Identity = 184/193 (95.34%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ +KPSEKQND+QSRAPSKLSSMFSGTQDKC+ACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDE 193
           A TPPPE AEE+E
Sbjct: 181 APTPPPEPAEEEE 193

[Close]

BLAST of Csor.00g181000 vs. ExPASy TrEMBL
Match: A0A6J1IRA7 (LIM domain-containing protein PLIM2c-like OS=Cucurbita maxima OX=3661 GN=LOC111479786 PE=4 SV=1)

HSP 1 Score: 417 bits (1073), Expect = 1.58e-147
Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHK CFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKTCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDEAKGDAEA--EEGAVET 207
           ATTPPPESAEEDEAKG+AEA  EEGAVET
Sbjct: 181 ATTPPPESAEEDEAKGNAEAQSEEGAVET 209

[Close]

BLAST of Csor.00g181000 vs. ExPASy TrEMBL
Match: A0A6J1E9B9 (LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC111431888 PE=4 SV=1)

HSP 1 Score: 417 bits (1072), Expect = 2.25e-147
Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDEAKGDAEA--EEGAVET 207
           ATTPPPESAEEDEAKG+AEA  EEGA ET
Sbjct: 181 ATTPPPESAEEDEAKGNAEAQSEEGAGET 209

[Close]

BLAST of Csor.00g181000 vs. ExPASy TrEMBL
Match: A0A6J1IIB7 (LIM domain-containing protein PLIM2c-like OS=Cucurbita maxima OX=3661 GN=LOC111474084 PE=4 SV=1)

HSP 1 Score: 386 bits (992), Expect = 2.96e-135
Identity = 187/205 (91.22%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQTSKPSEKQND  SRAP+K S+MFSGTQDKC+ACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDS-SRAPTKASAMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDEAKGDAEAEEGAV 205
           ATTPPPE+AE+DE     +AEE A 
Sbjct: 181 ATTPPPEAAEDDEGGAQPQAEEDAA 204

[Close]

BLAST of Csor.00g181000 vs. ExPASy TrEMBL
Match: A0A6J1F6K2 (LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC111441332 PE=4 SV=1)

HSP 1 Score: 384 bits (986), Expect = 2.43e-134
Identity = 186/205 (90.73%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQTSKP EKQND  SRAP+K S+MFSGTQDKC+ACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQTSKPPEKQNDP-SRAPTKASAMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDEAKGDAEAEEGAV 205
           ATTPPPE+AE+DE     +AEE A 
Sbjct: 181 ATTPPPEAAEDDEGGAQPQAEEDAA 204

[Close]

BLAST of Csor.00g181000 vs. ExPASy TrEMBL
Match: A0A1S3AW36 (LIM domain-containing protein PLIM2c-like OS=Cucumis melo OX=3656 GN=LOC103483293 PE=4 SV=1)

HSP 1 Score: 384 bits (985), Expect = 3.99e-134
Identity = 183/193 (94.82%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ +KPSEKQND+ SRAPSKLSSMFSGTQDKC+AC+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDL-SRAPSKLSSMFSGTQDKCAACTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGC+LTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 ATTPPPESAEEDE 193
           ATTPPPE AEE+E
Sbjct: 181 ATTPPPEPAEEEE 192

[Close]

BLAST of Csor.00g181000 vs. TAIR 10
Match: AT3G61230.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 300.8 bits (769), Expect = 8.3e-82
Identity = 148/209 (70.81%), Postives = 171/209 (81.82%), Query Frame = 0


Query: 2   SFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKPH 61
           +FTGT DKCKACDKTVYV++L++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCK H
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKVT 121
           FEQLFKESGNFSKNFQT+  +EK ND  ++AP++LSS FSGTQDKC+AC KTVYPLEK+T
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSND-ATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMT 122

Query: 122 LEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 181
           +EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + 
Sbjct: 123 MEGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRR 182

Query: 182 TTPPPESAE--EDEAK------GDAEAEE 203
           +T   +  E  EDEA        DA AEE
Sbjct: 183 STAEEDKTEPKEDEANPTEEETSDAAAEE 210

[Close]

BLAST of Csor.00g181000 vs. TAIR 10
Match: AT2G45800.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 299.3 bits (765), Expect = 2.4e-81
Identity = 145/208 (69.71%), Postives = 168/208 (80.77%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKCKACDKTVYV++LL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGN+SKNFQ  K +EK ND  +R PSKLSS FSGTQDKC+ C KTVYPLEKV
Sbjct: 61  HFEQLFKESGNYSKNFQAGK-TEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           T+EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN +
Sbjct: 121 TMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHR 180

Query: 181 ------ATTPPPESAEEDEAKGDAEAEE 203
                   +PP +  + D+     EA+E
Sbjct: 181 RSASSGGASPPSDDHKPDDTASIPEAKE 207

[Close]

BLAST of Csor.00g181000 vs. TAIR 10
Match: AT1G01780.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 295.8 bits (756), Expect = 2.7e-80
Identity = 142/210 (67.62%), Postives = 167/210 (79.52%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGTLDKC  CDKTVYVV++LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQTSKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ   P + +    +R PSK+SS+F GTQDKC+AC KTVYPLEK+
Sbjct: 61  HFEQLFKESGNFSKNFQ---PGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKI 120

Query: 121 TLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
            +EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+AA +++
Sbjct: 121 QMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRR 180

Query: 181 ---ATTPPPESAEEDEAKGDAEAEEGAVET 208
                T PPE  E  +   +A+ E G  E+
Sbjct: 181 TASGNTLPPEPTE--DVAVEAKEENGVSES 205

[Close]

BLAST of Csor.00g181000 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 271.2 bits (692), Expect = 7.0e-73
Identity = 122/191 (63.87%), Postives = 160/191 (83.77%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT  KC+AC+KTVY VELLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKP-SEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ +KP ++K     +R PS+L+ MFSGTQDKC+ C+KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAAN 180
           KVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KKATTPPPESA 190
           K+AT     +A
Sbjct: 181 KRATAAATAAA 191

[Close]

BLAST of Csor.00g181000 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 266.9 bits (681), Expect = 1.3e-71
Identity = 118/182 (64.84%), Postives = 154/182 (84.62%), Query Frame = 0


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60
           MSFTGT  KCKAC+KTVY VELLS +G  YHKSCFKC+HCK  L +SSYS M+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQT-SKPSEKQNDMQSRAPSKLSSMFSGTQDKCSACSKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+ +K ++K     +R PS+++  FSGTQ+KC+ CSKTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTLEGECYHKNCFRCAHGGCNLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANK 180
           VT+E + YHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 KA 182
           ++
Sbjct: 181 RS 182

The following BLAST results are available for this feature:

BLAST of Csor.00g181000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q500W4	1.2e-80	70.81	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C P...	[more]
O80839	3.4e-80	69.71	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
Q1ECF5	3.8e-79	67.62	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
O04193	9.9e-72	63.87	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q9M047	1.9e-70	64.84	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]

BLAST of Csor.00g181000 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6582598.1	6.65e-151	100.00	LIM domain-containing protein PLIM2c, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_022980412.1	3.26e-147	98.09	LIM domain-containing protein PLIM2c-like [Cucurbita maxima]	[more]
XP_022924376.1	4.64e-147	98.09	LIM domain-containing protein PLIM2c-like [Cucurbita moschata]	[more]
XP_023528481.1	1.55e-145	97.13	LIM domain-containing protein PLIM2c-like [Cucurbita pepo subsp. pepo]	[more]
XP_004134333.3	9.22e-136	95.34	LIM domain-containing protein PLIM2b isoform X1 [Cucumis sativus] >KAE8650257.1 ...	[more]

BLAST of Csor.00g181000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IRA7	1.58e-147	98.09	LIM domain-containing protein PLIM2c-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1E9B9	2.25e-147	98.09	LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1IIB7	2.96e-135	91.22	LIM domain-containing protein PLIM2c-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1F6K2	2.43e-134	90.73	LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A1S3AW36	3.99e-134	94.82	LIM domain-containing protein PLIM2c-like OS=Cucumis melo OX=3656 GN=LOC10348329...	[more]

BLAST of Csor.00g181000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61230.1	8.3e-82	70.81	GATA type zinc finger transcription factor family protein	[more]
AT2G45800.1	2.4e-81	69.71	GATA type zinc finger transcription factor family protein	[more]
AT1G01780.1	2.7e-80	67.62	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	7.0e-73	63.87	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	1.3e-71	64.84	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 106..158 e-value: 4.8E-13 score: 59.3 coord: 9..61 e-value: 5.4E-13 score: 59.2
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 10..65 e-value: 2.3E-13 score: 50.1 coord: 107..162 e-value: 5.7E-11 score: 42.5
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 105..165 score: 12.4543
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.4641
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 101..171 e-value: 4.4E-19 score: 70.4 coord: 6..74 e-value: 2.4E-19 score: 71.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..207
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..201
None	No IPR available	PANTHER	PTHR24206:SF69	LIM DOMAIN-CONTAINING PROTEIN PLIM2C	coord: 1..201
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 6..68 e-value: 6.04167E-38 score: 124.114
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 133..172
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 3..35
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 99..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g181000.m01	Csor.00g181000.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding