Csor.00g180490 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g180490
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	NDR1/HIN1-like protein 6
Location	Csor_Chr14: 16657891 .. 16658628 (-)
RNA-Seq Expression	Csor.00g180490
Synteny	Csor.00g180490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAGCCGCCATTGAAGCCGGTACTCCAGAAGCCTCCGGGGTATAAAGATCCAAATCTCACTGCTCCGCCAGTGCCTAGACCACCGGCGAGGAAACTGATTCTACCGTCGCCGCTAAGCCAGAATAACAAGAAGCGACGGAGCTGCTGCCGGAGATTCTGTTGCTTCCTCTGCCTTTTTGTTCTGATCCTGATCGTCGTGATTGTCGCCGTCGGTGGCTTTTTATACCTCTGGTTTGAGCCAAAACTTCCTGTGTTTCATCTCCAATCATTCCGGATCTCCAAATTCAACGTCACCGACAAAGCGGACGGCTCGTATTTAAACGCCAAAACAATCGGTCGCATTGAAATCAAGAATCCTAATGAGAAGTTATCACTAAATTACCGCGATATCGAGGTCGTTACCGCCGCCGGAGAAGGTACTCGAATTGAATTAGGATCAACAATCGTGCCGAGCTTTATTCAATCGAAGGAGAACACGACGAGTTGGAAGATCGAAACAATGGTCAGCAACGAAATCGTCGACGGCGGAGCGGGGCGGAAGCTGAACTCCGGCAACAGAACCGGAGAGCTAATGGTGATCGTCGAAGCACGTACGAAAATCGGATTCGTGGTGAATGGGCGGAGAATGCCGCGGGTGAAGATCGAAGTGGCGTGCGGTGGCGTGAGGTTGAAACGTCTCGACGGAGGCAACACGCCGAAATGCTCCATTCATTTGCCCAGATGGTTTCTGTAG

mRNA sequence

ATGGCAGAGCCGCCATTGAAGCCGGTACTCCAGAAGCCTCCGGGGTATAAAGATCCAAATCTCACTGCTCCGCCAGTGCCTAGACCACCGGCGAGGAAACTGATTCTACCGTCGCCGCTAAGCCAGAATAACAAGAAGCGACGGAGCTGCTGCCGGAGATTCTGTTGCTTCCTCTGCCTTTTTGTTCTGATCCTGATCGTCGTGATTGTCGCCGTCGGTGGCTTTTTATACCTCTGGTTTGAGCCAAAACTTCCTGTGTTTCATCTCCAATCATTCCGGATCTCCAAATTCAACGTCACCGACAAAGCGGACGGCTCGTATTTAAACGCCAAAACAATCGGTCGCATTGAAATCAAGAATCCTAATGAGAAGTTATCACTAAATTACCGCGATATCGAGGTCGTTACCGCCGCCGGAGAAGGTACTCGAATTGAATTAGGATCAACAATCGTGCCGAGCTTTATTCAATCGAAGGAGAACACGACGAGTTGGAAGATCGAAACAATGGTCAGCAACGAAATCGTCGACGGCGGAGCGGGGCGGAAGCTGAACTCCGGCAACAGAACCGGAGAGCTAATGGTGATCGTCGAAGCACGTACGAAAATCGGATTCGTGGTGAATGGGCGGAGAATGCCGCGGGTGAAGATCGAAGTGGCGTGCGGTGGCGTGAGGTTGAAACGTCTCGACGGAGGCAACACGCCGAAATGCTCCATTCATTTGCCCAGATGGTTTCTGTAG

Coding sequence (CDS)

ATGGCAGAGCCGCCATTGAAGCCGGTACTCCAGAAGCCTCCGGGGTATAAAGATCCAAATCTCACTGCTCCGCCAGTGCCTAGACCACCGGCGAGGAAACTGATTCTACCGTCGCCGCTAAGCCAGAATAACAAGAAGCGACGGAGCTGCTGCCGGAGATTCTGTTGCTTCCTCTGCCTTTTTGTTCTGATCCTGATCGTCGTGATTGTCGCCGTCGGTGGCTTTTTATACCTCTGGTTTGAGCCAAAACTTCCTGTGTTTCATCTCCAATCATTCCGGATCTCCAAATTCAACGTCACCGACAAAGCGGACGGCTCGTATTTAAACGCCAAAACAATCGGTCGCATTGAAATCAAGAATCCTAATGAGAAGTTATCACTAAATTACCGCGATATCGAGGTCGTTACCGCCGCCGGAGAAGGTACTCGAATTGAATTAGGATCAACAATCGTGCCGAGCTTTATTCAATCGAAGGAGAACACGACGAGTTGGAAGATCGAAACAATGGTCAGCAACGAAATCGTCGACGGCGGAGCGGGGCGGAAGCTGAACTCCGGCAACAGAACCGGAGAGCTAATGGTGATCGTCGAAGCACGTACGAAAATCGGATTCGTGGTGAATGGGCGGAGAATGCCGCGGGTGAAGATCGAAGTGGCGTGCGGTGGCGTGAGGTTGAAACGTCTCGACGGAGGCAACACGCCGAAATGCTCCATTCATTTGCCCAGATGGTTTCTGTAG

Protein sequence

MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLCLFVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKNPNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAGRKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIHLPRWFL

Homology

[Close]

BLAST of Csor.00g180490 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-12
Identity = 65/217 (29.95%), Postives = 99/217 (45.62%), Query Frame = 0


Query: 5   PLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLCLFVLI 64
           PL P       + DP+    P+ + P R + L  P     KKRRSCC R  C+   F+L+
Sbjct: 23  PLVPRGSSRSEHGDPSKV--PLNQRPQRFVPLAPP-----KKRRSCCCRCFCYTFCFLLL 82

Query: 65  LIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKNPNEK 124
           L+V + A  G LYL F+PKLP + +   ++++F +    D S   A  +  I  KNPNEK
Sbjct: 83  LVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQ--DSSLTTAFNV-TITAKNPNEK 142

Query: 125 LSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAGRKLN 184
           + + Y D   +T      ++  GS  +P F Q  ENTT   +E     +   G       
Sbjct: 143 IGIYYEDGSKITVWYMEHQLSNGS--LPKFYQGHENTTVIYVEMTGQTQNASGLRTTLEE 202

Query: 185 SGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACG 222
              RTG + + +     +       ++  V+  V CG
Sbjct: 203 QQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCG 227

[Close]

BLAST of Csor.00g180490 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.1e-08
Identity = 53/191 (27.75%), Postives = 88/191 (46.07%), Query Frame = 0


Query: 55  CCFLCLFVLILIVVIVAVG-GFLYLWF--EPKLPVFHLQSFRISKFNVTDKADGSYLNAK 114
           CC L LFV ++I +IV +G   L  W    P+   FH+    +++F+ T  +  + L   
Sbjct: 35  CCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHT--SPDNILRYN 94

Query: 115 TIGRIEIKNPNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVS 174
               + ++NPN+++ L Y  IE   A  EG R     T+ P F Q  +NTT         
Sbjct: 95  LALTVPVRNPNKRIGLYYDRIE-AHAYYEGKRFST-ITLTP-FYQGHKNTTVLTPTFQGQ 154

Query: 175 NEIV-DGGAGRKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDG 234
           N ++ + G  R LN+   +G   + ++ R ++ F +   +  R+K +V C  +RL     
Sbjct: 155 NLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTS 214

Query: 235 GNTPKCSIHLP 242
             T   S   P
Sbjct: 215 NGTTTTSTVFP 220

[Close]

BLAST of Csor.00g180490 vs. NCBI nr
Match: KAG6582649.1 (NDR1/HIN1-like protein 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019045.1 NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 489 bits (1260), Expect = 1.74e-174
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLCL 60
           MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLCL
Sbjct: 1   MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLCL 60

Query: 61  FVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN 120
           FVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN
Sbjct: 61  FVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN 120

Query: 121 PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAG 180
           PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAG
Sbjct: 121 PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAG 180

Query: 181 RKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIHL 240
           RKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIHL
Sbjct: 181 RKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIHL 240

Query: 241 PRWFL 245
           PRWFL
Sbjct: 241 PRWFL 245

[Close]

BLAST of Csor.00g180490 vs. NCBI nr
Match: XP_022924638.1 (NDR1/HIN1-like protein 6 [Cucurbita moschata])

HSP 1 Score: 485 bits (1249), Expect = 8.27e-173
Identity = 243/245 (99.18%), Postives = 244/245 (99.59%), Query Frame = 0


Query: 1   MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLCL 60
           MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPS LSQNNKKRRSCCRRFCCFLCL
Sbjct: 1   MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSSLSQNNKKRRSCCRRFCCFLCL 60

Query: 61  FVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN 120
           FVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN
Sbjct: 61  FVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN 120

Query: 121 PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAG 180
           PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAG
Sbjct: 121 PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAG 180

Query: 181 RKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIHL 240
           RKLNSGNRTGELM+IVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIHL
Sbjct: 181 RKLNSGNRTGELMMIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIHL 240

Query: 241 PRWFL 245
           PRWFL
Sbjct: 241 PRWFL 245

[Close]

BLAST of Csor.00g180490 vs. NCBI nr
Match: XP_023526806.1 (NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481 bits (1239), Expect = 2.77e-171
Identity = 240/245 (97.96%), Postives = 242/245 (98.78%), Query Frame = 0


Query: 1   MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLCL 60
           MAEPPLKPVLQKPPGYKDPNLTAPPVPRPP RKLILPSPLSQNNKKRRSCCRRFCCFLCL
Sbjct: 1   MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPVRKLILPSPLSQNNKKRRSCCRRFCCFLCL 60

Query: 61  FVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN 120
           FV+ILIVVIVA GGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN
Sbjct: 61  FVVILIVVIVAAGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN 120

Query: 121 PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAG 180
           PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAG
Sbjct: 121 PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAG 180

Query: 181 RKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIHL 240
           RKLNSGNRTGEL+VIVEARTKIGFVVNGRRMPRVKIEVACGGV LKRLDGGNTPKCSIHL
Sbjct: 181 RKLNSGNRTGELVVIVEARTKIGFVVNGRRMPRVKIEVACGGVSLKRLDGGNTPKCSIHL 240

Query: 241 PRWFL 245
           PRWFL
Sbjct: 241 PRWFL 245

[Close]

BLAST of Csor.00g180490 vs. NCBI nr
Match: XP_022979612.1 (NDR1/HIN1-like protein 6 [Cucurbita maxima])

HSP 1 Score: 476 bits (1226), Expect = 2.65e-169
Identity = 237/245 (96.73%), Postives = 241/245 (98.37%), Query Frame = 0


Query: 1   MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLCL 60
           MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLCL
Sbjct: 1   MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLCL 60

Query: 61  FVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN 120
           FVLILIVVIVA GGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN
Sbjct: 61  FVLILIVVIVAAGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN 120

Query: 121 PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAG 180
           PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFI SKENTTSWKIETMVSNEIVDGGAG
Sbjct: 121 PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIHSKENTTSWKIETMVSNEIVDGGAG 180

Query: 181 RKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIHL 240
           RKLNSGN+TGEL+VIVEARTKIGFV+NGRR PRVKIEV+CGGV LKRLDGGNTPKCSIHL
Sbjct: 181 RKLNSGNKTGELVVIVEARTKIGFVLNGRRTPRVKIEVSCGGVSLKRLDGGNTPKCSIHL 240

Query: 241 PRWFL 245
           PRWFL
Sbjct: 241 PRWFL 245

[Close]

BLAST of Csor.00g180490 vs. NCBI nr
Match: KAA0048921.1 (protein YLS9 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 405 bits (1042), Expect = 3.03e-141
Identity = 211/246 (85.77%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 1   MAEP-PLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLC 60
           MAEP PLKP+LQKPPG+KDPN TA PVPRPPARKLILPSPLSQ NKKRRSC RR CCF C
Sbjct: 1   MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60

Query: 61  LFVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIK 120
           LFVLILIVVI+AVGG LYLWFEPKLPV HLQSFRISKFNVTDK+DGSYLNAKTIGRIEIK
Sbjct: 61  LFVLILIVVILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120

Query: 121 NPNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGA 180
           NPN KLSLNY DIEV  AAGEGTR ELGS IVPSFIQS+ENTTS KIETMV+NE VD GA
Sbjct: 121 NPNSKLSLNYGDIEVQVAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVNNETVDDGA 180

Query: 181 GRKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIH 240
           GR LNSGNRTGEL+V VEARTKIGFVV GRRMP VKIEV CG V LKRLD GN PKCSIH
Sbjct: 181 GRYLNSGNRTGELVVNVEARTKIGFVVEGRRMPPVKIEVTCGSVSLKRLDRGNVPKCSIH 240

Query: 241 LPRWFL 245
           L RWFL
Sbjct: 241 LRRWFL 246

[Close]

BLAST of Csor.00g180490 vs. ExPASy TrEMBL
Match: A0A6J1ED23 (NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111432070 PE=4 SV=1)

HSP 1 Score: 485 bits (1249), Expect = 4.00e-173
Identity = 243/245 (99.18%), Postives = 244/245 (99.59%), Query Frame = 0


Query: 1   MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLCL 60
           MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPS LSQNNKKRRSCCRRFCCFLCL
Sbjct: 1   MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSSLSQNNKKRRSCCRRFCCFLCL 60

Query: 61  FVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN 120
           FVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN
Sbjct: 61  FVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN 120

Query: 121 PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAG 180
           PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAG
Sbjct: 121 PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAG 180

Query: 181 RKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIHL 240
           RKLNSGNRTGELM+IVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIHL
Sbjct: 181 RKLNSGNRTGELMMIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIHL 240

Query: 241 PRWFL 245
           PRWFL
Sbjct: 241 PRWFL 245

[Close]

BLAST of Csor.00g180490 vs. ExPASy TrEMBL
Match: A0A6J1IP67 (NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111479287 PE=4 SV=1)

HSP 1 Score: 476 bits (1226), Expect = 1.29e-169
Identity = 237/245 (96.73%), Postives = 241/245 (98.37%), Query Frame = 0


Query: 1   MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLCL 60
           MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLCL
Sbjct: 1   MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLCL 60

Query: 61  FVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN 120
           FVLILIVVIVA GGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN
Sbjct: 61  FVLILIVVIVAAGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKN 120

Query: 121 PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAG 180
           PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFI SKENTTSWKIETMVSNEIVDGGAG
Sbjct: 121 PNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIHSKENTTSWKIETMVSNEIVDGGAG 180

Query: 181 RKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIHL 240
           RKLNSGN+TGEL+VIVEARTKIGFV+NGRR PRVKIEV+CGGV LKRLDGGNTPKCSIHL
Sbjct: 181 RKLNSGNKTGELVVIVEARTKIGFVLNGRRTPRVKIEVSCGGVSLKRLDGGNTPKCSIHL 240

Query: 241 PRWFL 245
           PRWFL
Sbjct: 241 PRWFL 245

[Close]

BLAST of Csor.00g180490 vs. ExPASy TrEMBL
Match: A0A5A7U5Q0 (Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001400 PE=4 SV=1)

HSP 1 Score: 405 bits (1042), Expect = 1.47e-141
Identity = 211/246 (85.77%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 1   MAEP-PLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLC 60
           MAEP PLKP+LQKPPG+KDPN TA PVPRPPARKLILPSPLSQ NKKRRSC RR CCF C
Sbjct: 1   MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60

Query: 61  LFVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIK 120
           LFVLILIVVI+AVGG LYLWFEPKLPV HLQSFRISKFNVTDK+DGSYLNAKTIGRIEIK
Sbjct: 61  LFVLILIVVILAVGGVLYLWFEPKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120

Query: 121 NPNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGA 180
           NPN KLSLNY DIEV  AAGEGTR ELGS IVPSFIQS+ENTTS KIETMV+NE VD GA
Sbjct: 121 NPNSKLSLNYGDIEVQVAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVNNETVDDGA 180

Query: 181 GRKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIH 240
           GR LNSGNRTGEL+V VEARTKIGFVV GRRMP VKIEV CG V LKRLD GN PKCSIH
Sbjct: 181 GRYLNSGNRTGELVVNVEARTKIGFVVEGRRMPPVKIEVTCGSVSLKRLDRGNVPKCSIH 240

Query: 241 LPRWFL 245
           L RWFL
Sbjct: 241 LRRWFL 246

[Close]

BLAST of Csor.00g180490 vs. ExPASy TrEMBL
Match: A0A1S3AV73 (uncharacterized protein LOC103483219 OS=Cucumis melo OX=3656 GN=LOC103483219 PE=4 SV=1)

HSP 1 Score: 402 bits (1033), Expect = 3.45e-140
Identity = 210/246 (85.37%), Postives = 217/246 (88.21%), Query Frame = 0


Query: 1   MAEP-PLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLC 60
           MAEP PLKP+LQKPPG+KDPN TA PVPRPPARKLILPSPLSQ NKKRRSC RR CCF C
Sbjct: 1   MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60

Query: 61  LFVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIK 120
           LFVLILIVVI+AVGG LYLWFE KLPV HLQSFRISKFNVTDK+DGSYLNAKTIGRIEIK
Sbjct: 61  LFVLILIVVILAVGGVLYLWFERKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120

Query: 121 NPNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGA 180
           NPN KLSLNY DIEV  AAGEGTR ELGS IVPSFIQS+ENTTS KIETMV+NE VD GA
Sbjct: 121 NPNSKLSLNYGDIEVQVAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVNNETVDDGA 180

Query: 181 GRKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIH 240
           GR LNSGNRTGEL+V VEARTKIGFVV GRRMP VKIEV CG V LKRLD GN PKCSIH
Sbjct: 181 GRYLNSGNRTGELVVNVEARTKIGFVVEGRRMPPVKIEVTCGSVSLKRLDRGNVPKCSIH 240

Query: 241 LPRWFL 245
           L RWFL
Sbjct: 241 LRRWFL 246

[Close]

BLAST of Csor.00g180490 vs. ExPASy TrEMBL
Match: A0A5D3D146 (Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005190 PE=4 SV=1)

HSP 1 Score: 402 bits (1033), Expect = 3.45e-140
Identity = 210/246 (85.37%), Postives = 217/246 (88.21%), Query Frame = 0


Query: 1   MAEP-PLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLC 60
           MAEP PLKP+LQKPPG+KDPN TA PVPRPPARKLILPSPLSQ NKKRRSC RR CCF C
Sbjct: 1   MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPLSQKNKKRRSCWRRCCCFFC 60

Query: 61  LFVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIK 120
           LFVLILIVVI+AVGG LYLWFE KLPV HLQSFRISKFNVTDK+DGSYLNAKTIGRIEIK
Sbjct: 61  LFVLILIVVILAVGGVLYLWFERKLPVVHLQSFRISKFNVTDKSDGSYLNAKTIGRIEIK 120

Query: 121 NPNEKLSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGA 180
           NPN KLSLNY DIEV  AAGEGTR ELGS IVPSFIQS+ENTTS KIETMV+NE VD GA
Sbjct: 121 NPNSKLSLNYGDIEVQVAAGEGTRTELGSMIVPSFIQSEENTTSLKIETMVNNETVDDGA 180

Query: 181 GRKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTPKCSIH 240
           GR LNSGNRTGEL+V VEARTKIGFVV GRRMP VKIEV CG V LKRLD GN PKCSIH
Sbjct: 181 GRYLNSGNRTGELVVNVEARTKIGFVVEGRRMPPVKIEVTCGSVSLKRLDRGNVPKCSIH 240

Query: 241 LPRWFL 245
           L RWFL
Sbjct: 241 LRRWFL 246

[Close]

BLAST of Csor.00g180490 vs. TAIR 10
Match: AT2G46300.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 189.9 bits (481), Expect = 2.4e-48
Identity = 99/249 (39.76%), Postives = 156/249 (62.65%), Query Frame = 0


Query: 1   MAEPPLKPVLQKPPGYKDPNLTAPPVPRPPAR----KLILPSPLS-QNNKKRRSCCRRFC 60
           MA+  + PVLQKPPGY+DPN+++PP P PP +    +  +P P S +  KKRRSCCR  C
Sbjct: 1   MADYQMNPVLQKPPGYRDPNMSSPPPPPPPIQQQPMRKAVPMPTSYRPKKKRRSCCRFCC 60

Query: 61  CFLCLFVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGR 120
           C +C+ +++ I +++      YLWF+PKLP F L SFR+  F + D  DG+ L+A  + R
Sbjct: 61  CCICITLVLFIFLLLVGTAVFYLWFDPKLPTFSLASFRLDGFKLADDPDGASLSATAVAR 120

Query: 121 IEIKNPNEKLSLNYRDIEVVTAAGEGT-RIELGSTIVPSFIQSKENTTSWKIETMVSNEI 180
           +E+KNPN KL   Y +  V  + G G     +G T +  F Q  +N+TS K+ET V N++
Sbjct: 121 VEMKNPNSKLVFYYGNTAVDLSVGSGNDETGMGETTMNGFRQGPKNSTSVKVETTVKNQL 180

Query: 181 VDGGAGRKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGGNTP 240
           V+ G  ++L +  ++ +L++ V A+TK+G  V G ++  + + + CGGV L +LD  ++P
Sbjct: 181 VERGLAKRLAAKFQSKDLVINVVAKTKVGLGVGGIKIGMLAVNLRCGGVSLNKLD-TDSP 240

Query: 241 KCSIHLPRW 244
           KC ++  +W
Sbjct: 241 KCILNTLKW 248

[Close]

BLAST of Csor.00g180490 vs. TAIR 10
Match: AT1G01453.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 152.9 bits (385), Expect = 3.3e-37
Identity = 101/254 (39.76%), Postives = 149/254 (58.66%), Query Frame = 0


Query: 2   AEPPLKPVLQKPPGYKDP--NLTAPP--VPRPPARKLILPSPLSQNNKKRR-SCCRRFCC 61
           AE PL+P LQKPPG++D     +APP      P R+   P P+   +KKRR S CR FCC
Sbjct: 16  AEKPLQPALQKPPGFRDQQNQPSAPPSGTATLPRRR---PRPIHPADKKRRCSFCRVFCC 75

Query: 62  FLC-LFVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTD-KADG--SYLNAKT 121
            +C LF +IL+++++AV  F +LW+ PKLPV  L SF+IS FN +D K+D   S+L+A T
Sbjct: 76  CVCILFAVILLLILIAVAVF-FLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADT 135

Query: 122 IGRIEIKNPNEKLSLNYRDIEVVTAAGE-GTRIELGSTIVPSFIQSKENTTSWKIETMVS 181
              ++ +NPN KL+  Y D +V    GE      L ST V  FI+   N T+  + T V 
Sbjct: 136 TSVLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTVR 195

Query: 182 NEIVDGGAGRKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGG 241
              VD    ++L    ++ +L+V V A+TK+G  V  R++  V + + CGGV L+ LD  
Sbjct: 196 KRQVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRCGGVILQTLD-S 255

Query: 242 NTPKCSIHLPRWFL 246
              +C+I + +W++
Sbjct: 256 KMAQCTIKMLKWYV 264

[Close]

BLAST of Csor.00g180490 vs. TAIR 10
Match: AT1G01453.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-36
Identity = 101/252 (40.08%), Postives = 147/252 (58.33%), Query Frame = 0


Query: 2   AEPPLKPVLQKPPGYKDP--NLTAPP--VPRPPARKLILPSPLSQNNKKRR-SCCRRFCC 61
           AE PL+P LQKPPG++D     +APP      P R+   P P+   +KKRR S CR FCC
Sbjct: 16  AEKPLQPALQKPPGFRDQQNQPSAPPSGTATLPRRR---PRPIHPADKKRRCSFCRVFCC 75

Query: 62  FLC-LFVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTD-KADG--SYLNAKT 121
            +C LF +IL+++++AV  F +LW+ PKLPV  L SF+IS FN +D K+D   S+L+A T
Sbjct: 76  CVCILFAVILLLILIAVAVF-FLWYSPKLPVVRLASFKISNFNFSDGKSDDGWSFLSADT 135

Query: 122 IGRIEIKNPNEKLSLNYRDIEVVTAAGE-GTRIELGSTIVPSFIQSKENTTSWKIETMVS 181
              ++ +NPN KL+  Y D +V    GE      L ST V  FI+   N T+  + T V 
Sbjct: 136 TSVLDFRNPNGKLTFYYGDTDVAVILGEKDFETNLESTKVKGFIEKPGNRTAVIVPTTVR 195

Query: 182 NEIVDGGAGRKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLKRLDGG 241
              VD    ++L    ++ +L+V V A+TK+G  V  R++  V + + CGGV L+ LD  
Sbjct: 196 KRQVDDPTAKRLQVELKSKKLLVTVTAKTKVGLAVGSRKIVTVGVSLRCGGVILQTLD-S 255

Query: 242 NTPKCSIHLPRW 244
              +C+I + +W
Sbjct: 256 KMAQCTIKMLKW 262

[Close]

BLAST of Csor.00g180490 vs. TAIR 10
Match: AT4G01110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01453.1); Has 273 Blast hits to 272 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 141.4 bits (355), Expect = 1.0e-33
Identity = 90/257 (35.02%), Postives = 141/257 (54.86%), Query Frame = 0


Query: 3   EPPLKPVLQKPPGYKDPNLTAPPVP------------RPPARKLILPSPLSQNNKKRRSC 62
           E  LKPVLQKPPGY++ + + P  P            RPP  K  +P+      K++ S 
Sbjct: 4   ETLLKPVLQKPPGYRELH-SQPQTPLGSSSSSSSMLRRPP--KHAIPAAFYPTKKRQWSR 63

Query: 63  CRRFCCFLCLFVLILIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADG---SY 122
           CR FCC +C+ V I+I++++      +L++ P+LPV  L SFR+S FN +    G   S 
Sbjct: 64  CRVFCCCVCITVAIVILLLILTVSVFFLYYSPRLPVVRLSSFRVSNFNFSGGKAGDGLSQ 123

Query: 123 LNAKTIGRIEIKNPNEKLSLNYRDIEVVTAAGEGT-RIELGSTIVPSFIQSKENTTSWKI 182
           L A+   R++ +NPN KL   Y +++V  + GE      LGST V  F++   N T   +
Sbjct: 124 LTAEATARLDFRNPNGKLRYYYGNVDVAVSVGEDDFETSLGSTKVKGFVEKPGNRTVVIV 183

Query: 183 ETMVSNEIVDGGAGRKLNSGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACGGVRLK 242
              V  + VD    ++L +  ++ +L+V V A+TK+G  V  R++  V + ++CGGVRL+
Sbjct: 184 PIKVKKQQVDDPTVKRLRADMKSKKLVVKVMAKTKVGLGVGRRKIVTVGVTISCGGVRLQ 243

Query: 243 RLDGGNTPKCSIHLPRW 244
            LD     KC+I + +W
Sbjct: 244 TLD-SKMSKCTIKMLKW 256

[Close]

BLAST of Csor.00g180490 vs. TAIR 10
Match: AT1G65690.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 75.1 bits (183), Expect = 8.8e-14
Identity = 65/217 (29.95%), Postives = 99/217 (45.62%), Query Frame = 0


Query: 5   PLKPVLQKPPGYKDPNLTAPPVPRPPARKLILPSPLSQNNKKRRSCCRRFCCFLCLFVLI 64
           PL P       + DP+    P+ + P R + L  P     KKRRSCC R  C+   F+L+
Sbjct: 23  PLVPRGSSRSEHGDPSKV--PLNQRPQRFVPLAPP-----KKRRSCCCRCFCYTFCFLLL 82

Query: 65  LIVVIVAVGGFLYLWFEPKLPVFHLQSFRISKFNVTDKADGSYLNAKTIGRIEIKNPNEK 124
           L+V + A  G LYL F+PKLP + +   ++++F +    D S   A  +  I  KNPNEK
Sbjct: 83  LVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQ--DSSLTTAFNV-TITAKNPNEK 142

Query: 125 LSLNYRDIEVVTAAGEGTRIELGSTIVPSFIQSKENTTSWKIETMVSNEIVDGGAGRKLN 184
           + + Y D   +T      ++  GS  +P F Q  ENTT   +E     +   G       
Sbjct: 143 IGIYYEDGSKITVWYMEHQLSNGS--LPKFYQGHENTTVIYVEMTGQTQNASGLRTTLEE 202

Query: 185 SGNRTGELMVIVEARTKIGFVVNGRRMPRVKIEVACG 222
              RTG + + +     +       ++  V+  V CG
Sbjct: 203 QQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCG 227

The following BLAST results are available for this feature:

BLAST of Csor.00g180490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LD98	1.2e-12	29.95	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]
Q9SJ52	3.1e-08	27.75	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]

BLAST of Csor.00g180490 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6582649.1	1.74e-174	100.00	NDR1/HIN1-like protein 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG70...	[more]
XP_022924638.1	8.27e-173	99.18	NDR1/HIN1-like protein 6 [Cucurbita moschata]	[more]
XP_023526806.1	2.77e-171	97.96	NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo]	[more]
XP_022979612.1	2.65e-169	96.73	NDR1/HIN1-like protein 6 [Cucurbita maxima]	[more]
KAA0048921.1	3.03e-141	85.77	protein YLS9 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Csor.00g180490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ED23	4.00e-173	99.18	NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111432070 PE=4 SV=1	[more]
A0A6J1IP67	1.29e-169	96.73	NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111479287 PE=4 SV=1	[more]
A0A5A7U5Q0	1.47e-141	85.77	Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3AV73	3.45e-140	85.37	uncharacterized protein LOC103483219 OS=Cucumis melo OX=3656 GN=LOC103483219 PE=...	[more]
A0A5D3D146	3.45e-140	85.37	Protein YLS9 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Csor.00g180490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46300.1	2.4e-48	39.76	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G01453.2	3.3e-37	39.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G01453.1	1.3e-36	40.08	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G01110.1	1.0e-33	35.02	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G65690.1	8.8e-14	29.95	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR31234:SF48	SUBFAMILY NOT NAMED	coord: 1..244
None	No IPR available	PANTHER	PTHR31234	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 1..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g180490.m01	Csor.00g180490.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane