Csor.00g179340 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g179340
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description40S ribosomal protein SA
LocationCsor_Chr01: 60190 .. 62442 (+)
RNA-Seq ExpressionCsor.00g179340
SyntenyCsor.00g179340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACTGGAACAGCACCGCGTCAGCTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACGAAGAACTGTAACTTCCAAATGGAGCGTTACGTTTTCAAGCGTCGAAACGATGGTATGTTGTGAATCACTTTACTTTTAGATTTTCCAAGTTTGTTGAACTCCCCAAACCGCTTCCTAGATCCTCTTGTTTTCAATATTGACTGTGATTTGTTTTGCACTGTAACATTGAGCACTAATGTCCCTGCCCAATGACCCTAAGTTTTGGAATGAAATTCTAAGGACTAGAGCGATCATAATTTCATGAGTGCGTATATATATCCGTGATCTCTTTGTTAAATTTGTGATAGTGATTACAATTCAGAGACGGTGTCTGACTATTGTTTGGTTTACCTCTTTAGTTATGACTGTATTTGCCAAGGACACATTGTTGAATAGTCCTATGGATTCTACATGTTTGGTGTGCGACAGCACGTGTGATGTCATTCTTAATTTGATCCCACAATGTTGGTTCATACGGTCGAAGATTTGAAGATTAATCCAATCTCTATTGTTTGAAGAATCAATTTTGTATTCGAGTCTGTTACTTTGAGGAATGTTAAGTTATTAAAGCCTTAAAAAGAGGTTTGATCTCTATATTTTCCATATGACGAACCTTTTTTTTTTTTCTAATTCTCCTTTTTAGGAATCTACATTATTAACCTTGGTAAGACATGGGAGAAACTTCAGATGGCTGCCAGAGTTATTGTGGGTATTGAGAATCCACAGGACATCATTGTTCAGTCTGCAAGGCCTTATGGTCAGAGGGCCGTCTTGAAGTTTGCTCAACACACTGGGGCTCATGCAATAGCCGGGAGGCATACCCCTGGAACCTTCACTAACCAGCTTCAGACCTCTTTCAATGAACCACGTCTTCTGATACTTACTGATCCTAGAACTGATCATCAGGTGATTGAGCCTTTTTAAAGACCGATAAAAGTTCTCTGTTATTAGTTTTAAGTCAAAAGGATCGTCTTCTTTTTACCAATGCTAGATTCACTTTTGTTTGTTCCCTTCATTTTATTTATACCTGACTTGTTGCTGCTATTTGTGTTGTCTGGTTGGTTTCTCGTTTCCAGCCCATTAAGGAAGGTGCGCTTGGAAACATTCCTACAATTGCCTTTTGCGATACTGATTCACCAATGCGGTATGTTGATATTGGGATTCCAGCAAATAACAAGGGGAAACATAGCATTGGATGTCTTTTCTGGCTTTTGGCAAGGATGGTTCTGCAGATGCGTGGAACAATTCGTGCAGGGCATAAATGGGACGTGATGGTAAGATCAACATTATATTTTATATCGTAACATTGTAAACCGTGTTCTGAACTGGAAGTTTGGGTTAACGCTTTAGTGTTGGAAGTTTAATTGAAGGTTTGGATTGAATCAATGTATGTGTTTCTTCTGCAGGTGGATTTGTTTTTCTACCGAGAGCCTGAGGAGGCCAAGGAGAAAGAGGAAGAGGCTGTTGCGCCTCCAGATTATGGCATTGCCGATTATGGTGCTGCTCCACTTGTTGCCTCAGATCAATGGGCAGGACAAATTTCTGATGCTCAGTGGGGTGACCCTGATGTGGTTCCACCACCTGTAGCTGCTGCAGTTGTGCCACCTGTTCCGAGTGTTGAGTGGGCCCAAGAGCCAGGTTGAGCCCGTGTTTCCTTTTATGATTTAGTTGAATACCCCCGTGCTCATTGCCGTGTGTTTAGCTTTTGAAAGAAATCACGCTGGTTTATGTTTATAATTACCACCTGCCAGTTCCAGTTACCTTGTAGTTTGTCATTCGATAACTTGGTTGGTTGTCTGTTTGAGTCGTAGCAAAAAACAACGTTGTTTTTCCATTAACATACTTATTTTTTGACGCCTTCTTTTCTGGGTTTTTTTTTTACTTGTGCAGTTGCTTTAGCATCAGACGGATGGGATGTTGCAGTACCACCACCAGCACCTTCAGCCGAAGGTGCTGCGCCTCCGGCTGCCAGTTGGTAGGGTACACTAAGGGAACTATCGAGAATTCATTAATCGTTTTATGAGTTTGCTTGTTTATGTAGGGGTACCACCTTTTTTGGTTGCAAAATTGGCTTGCCCCTTTTCTGATAGTCCAGTTTTCGATTCTGATATTGAAATTTTGACATCAACTTTGGTATCTTGGTACAATTTTTTTGGGATATATGGAATTTACTCGCCTCAAGTTTAG

mRNA sequence

ATGGCCACTGGAACAGCACCGCGTCAGCTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACGAAGAACTGTAACTTCCAAATGGAGCGTTACGTTTTCAAGCGTCGAAACGATGGAATCTACATTATTAACCTTGGTAAGACATGGGAGAAACTTCAGATGGCTGCCAGAGTTATTGTGGGTATTGAGAATCCACAGGACATCATTGTTCAGTCTGCAAGGCCTTATGGTCAGAGGGCCGTCTTGAAGTTTGCTCAACACACTGGGGCTCATGCAATAGCCGGGAGGCATACCCCTGGAACCTTCACTAACCAGCTTCAGACCTCTTTCAATGAACCACGTCTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATTAAGGAAGGTGCGCTTGGAAACATTCCTACAATTGCCTTTTGCGATACTGATTCACCAATGCGGTATGTTGATATTGGGATTCCAGCAAATAACAAGGGGAAACATAGCATTGGATGTCTTTTCTGGCTTTTGGCAAGGATGGTTCTGCAGATGCGTGGAACAATTCGTGCAGGGCATAAATGGGACGTGATGGTGGATTTGTTTTTCTACCGAGAGCCTGAGGAGGCCAAGGAGAAAGAGGAAGAGGCTGTTGCGCCTCCAGATTATGGCATTGCCGATTATGGTGCTGCTCCACTTGTTGCCTCAGATCAATGGGCAGGACAAATTTCTGATGCTCAGTGGGGTGACCCTGATGTGGTTCCACCACCTGTAGCTGCTGCAGTTGTGCCACCTGTTCCGAGTGTTGAGTGGGCCCAAGAGCCAGTTGCTTTAGCATCAGACGGATGGGATGTTGCAGTACCACCACCAGCACCTTCAGCCGAAGGGGTACCACCTTTTTTGGTTGCAAAATTGGCTTGCCCCTTTTCTGATAGTCCAGTTTTCGATTCTGATATTGAAATTTTGACATCAACTTTGGTATCTTGGTACAATTTTTTTGGGATATATGGAATTTACTCGCCTCAAGTTTAG

Coding sequence (CDS)

ATGGCCACTGGAACAGCACCGCGTCAGCTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACGAAGAACTGTAACTTCCAAATGGAGCGTTACGTTTTCAAGCGTCGAAACGATGGAATCTACATTATTAACCTTGGTAAGACATGGGAGAAACTTCAGATGGCTGCCAGAGTTATTGTGGGTATTGAGAATCCACAGGACATCATTGTTCAGTCTGCAAGGCCTTATGGTCAGAGGGCCGTCTTGAAGTTTGCTCAACACACTGGGGCTCATGCAATAGCCGGGAGGCATACCCCTGGAACCTTCACTAACCAGCTTCAGACCTCTTTCAATGAACCACGTCTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATTAAGGAAGGTGCGCTTGGAAACATTCCTACAATTGCCTTTTGCGATACTGATTCACCAATGCGGTATGTTGATATTGGGATTCCAGCAAATAACAAGGGGAAACATAGCATTGGATGTCTTTTCTGGCTTTTGGCAAGGATGGTTCTGCAGATGCGTGGAACAATTCGTGCAGGGCATAAATGGGACGTGATGGTGGATTTGTTTTTCTACCGAGAGCCTGAGGAGGCCAAGGAGAAAGAGGAAGAGGCTGTTGCGCCTCCAGATTATGGCATTGCCGATTATGGTGCTGCTCCACTTGTTGCCTCAGATCAATGGGCAGGACAAATTTCTGATGCTCAGTGGGGTGACCCTGATGTGGTTCCACCACCTGTAGCTGCTGCAGTTGTGCCACCTGTTCCGAGTGTTGAGTGGGCCCAAGAGCCAGTTGCTTTAGCATCAGACGGATGGGATGTTGCAGTACCACCACCAGCACCTTCAGCCGAAGGGGTACCACCTTTTTTGGTTGCAAAATTGGCTTGCCCCTTTTCTGATAGTCCAGTTTTCGATTCTGATATTGAAATTTTGACATCAACTTTGGTATCTTGGTACAATTTTTTTGGGATATATGGAATTTACTCGCCTCAAGTTTAG

Protein sequence

MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEGVPPFLVAKLACPFSDSPVFDSDIEILTSTLVSWYNFFGIYGIYSPQV
Homology
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BLAST of Csor.00g179340 vs. ExPASy Swiss-Prot
Match: O22518 (40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 4.3e-128
Identity = 232/294 (78.91%), Postives = 244/294 (82.99%), Query Frame = 0 

Query: 2   ATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQ 61
           A    PRQLSQKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTWEKLQ
Sbjct: 7   AAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQ 66

Query: 62  MAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEP 121
           +AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EP
Sbjct: 67  LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEP 126

Query: 122 RLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 181
           RLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA
Sbjct: 127 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 186

Query: 182 RMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQW 241
           RMVLQMRGTIR G KWDVMVDLFFYREPEEAK++EEE     DY I D+ A  + A  QW
Sbjct: 187 RMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPAVDYAITDFNAGAIAADGQW 246

Query: 242 AGQISDAQWGDPDVVPPPVAAAVVPPVPSVEW---AQEPVALASDGWDVAVPPP 293
            G I D  W   D VP P     +P VP V W   A+ P A   D W  AVPPP
Sbjct: 247 PGTI-DQSWS--DAVPQP-----IPAVPGVNWGAPAEAPAAAGGD-WGEAVPPP 291

[Close]
BLAST of Csor.00g179340 vs. ExPASy Swiss-Prot
Match: A5BUU4 (40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 7.3e-128
Identity = 242/314 (77.07%), Postives = 253/314 (80.57%), Query Frame = 0 

Query: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T  R LSQKE DIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATPT--RALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+E
Sbjct: 61  QLAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKE-EEAVAPPDYGIADYGAAPL--VA 240
           ARMVLQMR TI  GHKWDVMVDLFFYREPEE KE+E +E VA PDYGI DY A  L  + 
Sbjct: 181 ARMVLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLG 240

Query: 241 SDQWAGQISDA-QWGDPDVVPPPVAAAVVPPVPSVEWAQ-----EPVALASDGWDVAVPP 300
              W   I+DA QWG    VP   A A +P VP   W         V +A+DGWD A  P
Sbjct: 241 GGDWGAPITDAPQWGAD--VP---AVAPIPAVPGSNWGDAAPMPSAVPIATDGWDAAAAP 300

Query: 301 PA----PSAEGVPP 302
           P     P  EGVPP
Sbjct: 301 PVAVPPPVVEGVPP 307

[Close]
BLAST of Csor.00g179340 vs. ExPASy Swiss-Prot
Match: O65751 (40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 4.7e-127
Identity = 237/305 (77.70%), Postives = 255/305 (83.61%), Query Frame = 0 

Query: 1   MATGTAP-RQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEK 60
           MAT TAP RQL+QKEADIQMMLAA+VHLGTKNCNFQMERY+FKRRNDGIYIINLGKTW+K
Sbjct: 1   MATTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDK 60

Query: 61  LQMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L +AAR+IV IEN QDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASD 240
           LARMVLQMRGTIR G KWDVMVDLFFYREPEEAK+ EE+ VA PDY IAD+  + + +  
Sbjct: 181 LARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDEVAAPDYAIADFNVSAIPSDG 240

Query: 241 QWAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPP--APSA- 300
           QW   I D  W   D VP P     +P VP+V WA  P A+A D W  AVPPP   P+A 
Sbjct: 241 QWPAAI-DQPWN--DAVPQP-----IPAVPAVNWA-APEAVAGD-WGEAVPPPQQIPTAG 295

[Close]
BLAST of Csor.00g179340 vs. ExPASy Swiss-Prot
Match: O80377 (40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 3.1e-126
Identity = 232/299 (77.59%), Postives = 250/299 (83.61%), Query Frame = 0 

Query: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MA+G   R+LS  EADIQMM AAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MASGA--RELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
            +AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+E
Sbjct: 61  MLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ 240
           ARMVLQMRG I  GHKW+VMVDLFFYREPEE K++EEE +   DY +ADY AAP+  +DQ
Sbjct: 181 ARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEEDLPVGDY-VADYAAAPIGGADQ 240

Query: 241 WAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEGV 300
           W   I DAQWG  DVV P  +A     VP+  W  +   +A DGWD A  PP P A G+
Sbjct: 241 W-NAIPDAQWGG-DVVQPANSA-----VPAGTWT-DAGPIAGDGWDAAAAPPVPGAVGL 288

[Close]
BLAST of Csor.00g179340 vs. ExPASy Swiss-Prot
Match: Q08682 (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3)

HSP 1 Score: 433.0 bits (1112), Expect = 3.3e-120
Identity = 220/296 (74.32%), Postives = 238/296 (80.41%), Query Frame = 0 

Query: 9   QLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIV 68
           QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIV
Sbjct: 11  QLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV 70

Query: 69  GIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTD 128
            IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF+EPRLLILTD
Sbjct: 71  AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTD 130

Query: 129 PRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 188
           PRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMR
Sbjct: 131 PRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 190

Query: 189 GTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAP-----LVASDQW-A 248
           GTI AG KWDVMVDLFFYREPEE K ++E+   P     A+YGA P     +V  DQW  
Sbjct: 191 GTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQ----AEYGALPAPEYGMVGGDQWTT 250

Query: 249 GQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEG 299
            QI DA W  P     P++AA      +  W+    A A  GW+ A PP    A G
Sbjct: 251 AQIPDAAW--PGEGQAPISAAPA----AASWSDSAAAPADGGWEAAAPPSGAPAAG 296

[Close]
BLAST of Csor.00g179340 vs. NCBI nr
Match: KAG6606673.1 (40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 705 bits (1819), Expect = 2.47e-256
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0 

Query: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ 240
           ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ 240

Query: 241 WAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEGVP 300
           WAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEGVP
Sbjct: 241 WAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEGVP 300

Query: 301 PFLVAKLACPFSDSPVFDSDIEILTSTLVSWYNFFGIYGIYSPQV 345
           PFLVAKLACPFSDSPVFDSDIEILTSTLVSWYNFFGIYGIYSPQV
Sbjct: 301 PFLVAKLACPFSDSPVFDSDIEILTSTLVSWYNFFGIYGIYSPQV 345

[Close]
BLAST of Csor.00g179340 vs. NCBI nr
Match: XP_022949415.1 (40S ribosomal protein SA-like [Cucurbita moschata] >XP_023525119.1 40S ribosomal protein SA-like [Cucurbita pepo subsp. pepo] >KAG7036393.1 40S ribosomal protein SA [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 611 bits (1576), Expect = 6.30e-220
Identity = 299/301 (99.34%), Postives = 299/301 (99.34%), Query Frame = 0 

Query: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ 240
           ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ 240

Query: 241 WAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEGVP 300
           WAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEG  
Sbjct: 241 WAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEGAA 300

[Close]
BLAST of Csor.00g179340 vs. NCBI nr
Match: XP_022998206.1 (40S ribosomal protein SA-like [Cucurbita maxima])

HSP 1 Score: 603 bits (1554), Expect = 1.42e-216
Identity = 295/301 (98.01%), Postives = 296/301 (98.34%), Query Frame = 0 

Query: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVGIENPQ+IIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ 240
           ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ 240

Query: 241 WAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEGVP 300
           WAGQISDAQWGDPDVVPPPVAAAVVPPV SVEWAQEPVALASDGWDVAVPPPAP  EG  
Sbjct: 241 WAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA 300

[Close]
BLAST of Csor.00g179340 vs. NCBI nr
Match: XP_008460336.2 (PREDICTED: 40S ribosomal protein SA-like [Cucumis melo])

HSP 1 Score: 573 bits (1478), Expect = 5.61e-205
Identity = 282/302 (93.38%), Postives = 289/302 (95.70%), Query Frame = 0 

Query: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEE-AVAPPDYGIADYGAAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKEKEEE AVAPPDYGIADYG APLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEGV 300
           QWAGQISDAQWG PD++P P AA VVPPV +VEW QEPVALASDGWD AVPPPAP+AEG 
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAVVVPPVSNVEWTQEPVALASDGWDAAVPPPAPAAEGG 300

[Close]
BLAST of Csor.00g179340 vs. NCBI nr
Match: XP_031738662.1 (40S ribosomal protein SA isoform X2 [Cucumis sativus])

HSP 1 Score: 568 bits (1465), Expect = 5.57e-203
Identity = 281/303 (92.74%), Postives = 288/303 (95.05%), Query Frame = 0 

Query: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEE-AVAPPDYGIADYGAAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKEKEEE AVAPPDYGIADYG APLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGDPDVVPPPVAA-AVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEG 300
           QWAGQISDAQWG PD++P P AA  VVPPV +VEW QEPVA+ASDGWD A PPPAPSAEG
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVAIASDGWDAAAPPPAPSAEG 300

[Close]
BLAST of Csor.00g179340 vs. ExPASy TrEMBL
Match: A0A6J1GCP6 (40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111452769 PE=3 SV=1)

HSP 1 Score: 611 bits (1576), Expect = 3.05e-220
Identity = 299/301 (99.34%), Postives = 299/301 (99.34%), Query Frame = 0 

Query: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ 240
           ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ 240

Query: 241 WAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEGVP 300
           WAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEG  
Sbjct: 241 WAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEGAA 300

[Close]
BLAST of Csor.00g179340 vs. ExPASy TrEMBL
Match: A0A6J1K9M4 (40S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111492923 PE=3 SV=1)

HSP 1 Score: 603 bits (1554), Expect = 6.87e-217
Identity = 295/301 (98.01%), Postives = 296/301 (98.34%), Query Frame = 0 

Query: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVGIENPQ+IIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ 240
           ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAPLVASDQ 240

Query: 241 WAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEGVP 300
           WAGQISDAQWGDPDVVPPPVAAAVVPPV SVEWAQEPVALASDGWDVAVPPPAP  EG  
Sbjct: 241 WAGQISDAQWGDPDVVPPPVAAAVVPPVSSVEWAQEPVALASDGWDVAVPPPAPPTEGAA 300

[Close]
BLAST of Csor.00g179340 vs. ExPASy TrEMBL
Match: A0A1S3CDH5 (40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103499190 PE=3 SV=1)

HSP 1 Score: 573 bits (1478), Expect = 2.72e-205
Identity = 282/302 (93.38%), Postives = 289/302 (95.70%), Query Frame = 0 

Query: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEE-AVAPPDYGIADYGAAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKEKEEE AVAPPDYGIADYG APLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEGV 300
           QWAGQISDAQWG PD++P P AA VVPPV +VEW QEPVALASDGWD AVPPPAP+AEG 
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAVVVPPVSNVEWTQEPVALASDGWDAAVPPPAPAAEGG 300

[Close]
BLAST of Csor.00g179340 vs. ExPASy TrEMBL
Match: A0A0A0L946 (40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_3G646520 PE=3 SV=1)

HSP 1 Score: 564 bits (1453), Expect = 1.88e-201
Identity = 281/304 (92.43%), Postives = 288/304 (94.74%), Query Frame = 0 

Query: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEE-AVAPPDYGIADYGAAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKEKEEE AVAPPDYGIADYG APLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGDPDVVPPPVAA-AVVPPVPSVEWAQEPV-ALASDGWDVAVPPPAPSAE 300
           QWAGQISDAQWG PD++P P AA  VVPPV +VEW QEPV A+ASDGWD A PPPAPSAE
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDAAAPPPAPSAE 300

[Close]
BLAST of Csor.00g179340 vs. ExPASy TrEMBL
Match: A0A6J1GVZ0 (40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111457923 PE=3 SV=1)

HSP 1 Score: 555 bits (1431), Expect = 4.07e-198
Identity = 279/304 (91.78%), Postives = 285/304 (93.75%), Query Frame = 0 

Query: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T PRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVGIENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEKEEEAV--APPDYGIADYGAAPLVAS 240
           ARMVLQMRGTIRAG KWDVMVDLFFYREPEEAKEKEEE    AP DYGIAD+GAAPLV S
Sbjct: 181 ARMVLQMRGTIRAGLKWDVMVDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTS 240

Query: 241 DQWAGQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAE- 300
           DQWAGQISDAQWG PDVVPPP AA V PPV +VEW+QEPVA +SDGW  AVPPPAPSAE 
Sbjct: 241 DQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVA-SSDGWQAAVPPPAPSAEV 300

[Close]
BLAST of Csor.00g179340 vs. TAIR 10
Match: AT1G72370.1 (40s ribosomal protein SA )

HSP 1 Score: 433.0 bits (1112), Expect = 2.3e-121
Identity = 220/296 (74.32%), Postives = 238/296 (80.41%), Query Frame = 0 

Query: 9   QLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIV 68
           QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIV
Sbjct: 11  QLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV 70

Query: 69  GIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTD 128
            IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF+EPRLLILTD
Sbjct: 71  AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTD 130

Query: 129 PRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 188
           PRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMR
Sbjct: 131 PRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 190

Query: 189 GTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAP-----LVASDQW-A 248
           GTI AG KWDVMVDLFFYREPEE K ++E+   P     A+YGA P     +V  DQW  
Sbjct: 191 GTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQ----AEYGALPAPEYGMVGGDQWTT 250

Query: 249 GQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEG 299
            QI DA W  P     P++AA      +  W+    A A  GW+ A PP    A G
Sbjct: 251 AQIPDAAW--PGEGQAPISAAPA----AASWSDSAAAPADGGWEAAAPPSGAPAAG 296

[Close]
BLAST of Csor.00g179340 vs. TAIR 10
Match: AT1G72370.2 (40s ribosomal protein SA )

HSP 1 Score: 428.3 bits (1100), Expect = 5.7e-120
Identity = 219/296 (73.99%), Postives = 237/296 (80.07%), Query Frame = 0 

Query: 9   QLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIV 68
           QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIV
Sbjct: 11  QLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV 70

Query: 69  GIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTD 128
            IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF+EPRLLILTD
Sbjct: 71  AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTD 130

Query: 129 PRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 188
           PRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMR
Sbjct: 131 PRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 190

Query: 189 GTIRAGHKWDVMVDLFFYREPEEAKEKEEEAVAPPDYGIADYGAAP-----LVASDQW-A 248
           GTI AG KWDVMVDLFFYREPEE K ++E+   P     A+YGA P     +V  DQW  
Sbjct: 191 GTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQ----AEYGALPAPEYGMVGGDQWTT 250

Query: 249 GQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWDVAVPPPAPSAEG 299
            QI DA W  P     P++AA      +  W+      A  GW+ A PP    A G
Sbjct: 251 AQIPDAAW--PGEGQAPISAAPA----AASWSDS----ADGGWEAAAPPSGAPAAG 292

[Close]
BLAST of Csor.00g179340 vs. TAIR 10
Match: AT3G04770.2 (40s ribosomal protein SA B )

HSP 1 Score: 419.5 bits (1077), Expect = 2.7e-117
Identity = 215/284 (75.70%), Postives = 236/284 (83.10%), Query Frame = 0 

Query: 5   TAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAA 64
           TA RQ+S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KLQMAA
Sbjct: 8   TAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAA 67

Query: 65  RVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLL 124
           RVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAGRHTPGTFTNQ+QTSF+EPRLL
Sbjct: 68  RVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLL 127

Query: 125 ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMV 184
           ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMV
Sbjct: 128 ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMV 187

Query: 185 LQMRGTIRAGHKWDVMVDLFFYREPEEAK-EKEEEAVAPPDYGIADYGAAPLVASDQW-A 244
           LQMRGTI A  KWDVMVDLFFYREPEEAK E +EEA    DYG        +V  DQW  
Sbjct: 188 LQMRGTILAAQKWDVMVDLFFYREPEEAKQEGDEEAEVQADYG--------MVGGDQWTT 247

Query: 245 GQISDAQWGDPDVVPPPVAAAVVPPVPSVEWAQEPVALASDGWD 287
            QISDA W   +V  P  AA  V    +  W  E  ++ + GW+
Sbjct: 248 AQISDAAWSG-EVEQPISAAPAVGVTVAAGW--EAASVPAAGWE 280

[Close]
BLAST of Csor.00g179340 vs. TAIR 10
Match: AT3G04770.1 (40s ribosomal protein SA B )

HSP 1 Score: 373.2 bits (957), Expect = 2.2e-103
Identity = 177/198 (89.39%), Postives = 191/198 (96.46%), Query Frame = 0 

Query: 5   TAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAA 64
           TA RQ+S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KLQMAA
Sbjct: 8   TAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAA 67

Query: 65  RVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLL 124
           RVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAGRHTPGTFTNQ+QTSF+EPRLL
Sbjct: 68  RVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLL 127

Query: 125 ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMV 184
           ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMV
Sbjct: 128 ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMV 187

Query: 185 LQMRGTIRAGHKWDVMVD 203
           LQMRGTI A  KWDVMV+
Sbjct: 188 LQMRGTILAAQKWDVMVN 205

The following BLAST results are available for this feature:
BLAST of Csor.00g179340 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O225184.3e-12878.9140S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1[more]
A5BUU47.3e-12877.0740S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV... [more]
O657514.7e-12777.7040S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1[more]
O803773.1e-12677.5940S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1[more]
Q086823.3e-12074.3240S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3[more]
BLAST of Csor.00g179340 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6606673.12.47e-256100.0040S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022949415.16.30e-22099.3440S ribosomal protein SA-like [Cucurbita moschata] >XP_023525119.1 40S ribosomal... [more]
XP_022998206.11.42e-21698.0140S ribosomal protein SA-like [Cucurbita maxima][more]
XP_008460336.25.61e-20593.38PREDICTED: 40S ribosomal protein SA-like [Cucumis melo][more]
XP_031738662.15.57e-20392.7440S ribosomal protein SA isoform X2 [Cucumis sativus][more]
BLAST of Csor.00g179340 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GCP63.05e-22099.3440S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111452769 PE=3 SV=1[more]
A0A6J1K9M46.87e-21798.0140S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111492923 PE=3 SV=1[more]
A0A1S3CDH52.72e-20593.3840S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103499190 PE=3 SV=1[more]
A0A0A0L9461.88e-20192.4340S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_3G646520 PE=3 SV=1[more]
A0A6J1GVZ04.07e-19891.7840S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111457923 PE=3 SV=1[more]
BLAST of Csor.00g179340 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G72370.12.3e-12174.3240s ribosomal protein SA [more]
AT1G72370.25.7e-12073.9940s ribosomal protein SA [more]
AT3G04770.22.7e-11775.7040s ribosomal protein SA B [more]
AT3G04770.12.2e-10389.3940s ribosomal protein SA B [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PRINTSPR00395RIBOSOMALS2coord: 138..149
score: 46.03
coord: 17..35
score: 35.79
coord: 159..173
score: 53.64
coord: 47..56
score: 64.92
coord: 96..113
score: 47.01
coord: 121..138
score: 44.62
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 20..113
e-value: 5.0E-14
score: 52.1
coord: 119..184
e-value: 7.3E-11
score: 41.7
IPR001865Ribosomal protein S2CDDcd01425RPS2coord: 20..186
e-value: 6.50758E-72
score: 219.761
IPR005707Ribosomal protein S2, eukaryotic/archaealTIGRFAMTIGR01012TIGR01012coord: 12..208
e-value: 8.1E-96
score: 317.1
IPR005707Ribosomal protein S2, eukaryotic/archaealPANTHERPTHR1148940S RIBOSOMAL PROTEIN SAcoord: 9..293
NoneNo IPR availableGENE3D3.40.50.10490coord: 16..221
e-value: 4.0E-103
score: 345.0
NoneNo IPR availablePANTHERPTHR11489:SF2540S RIBOSOMAL PROTEIN SAcoord: 9..293
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00962RIBOSOMAL_S2_1coord: 17..28
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00963RIBOSOMAL_S2_2coord: 121..145
IPR027498Ribosomal protein S2, eukaryoticHAMAPMF_03015Ribosomal_S2_eukcoord: 4..276
score: 50.215267
IPR023591Ribosomal protein S2, flavodoxin-like domain superfamilySUPERFAMILY52313Ribosomal protein S2coord: 12..202

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g179340.m01Csor.00g179340.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome