Csor.00g179310 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATGGCAATGCGTTGCTCTTGCTTCCTTTCCCGCCCGAATTCCCCGCGATCTCCTCCCTCTGATCAATTATTGAGGAAAATCCATGTTTCCGGTTAGTATCATGGTGCTTATAACGTTCTTTTGTTTTTCATCTATTCTTTTAAGTTCATTTCGAATGGGAGATGCCTGTTTAGAAGCTTTTAGCTTGAGGTTTTGATGTTTTGAATAACTGAACATGTTCCAACCATTTCTCGATTAATACTTAGGATTTCAAGCATTCTCCTATTAGATGAGTTCTGATATGGTTAGGACTGGGGACTTAAATGACAAATTAAGGAAGAAAAAGGATTTCCTATCCTGGCGTGTTTATGTGGTCGAAGCAGGCAAATGAACTTTTATAGTTACAAGTTCAACTATCCTGGCGTGTTTATGTGGTCGAAGCAGGCAAATGAACTTTTATAGTTACAAGTTCAAGTAAAATAAGCTGGTGTTTTTTGGTTCTGGGCACGGAGCATACACTAATTTGGTATTCTTTCATTAGAGGGGAAATTGAGATTCAACCCAACTGTTCGTAACATTTCAACTTTAAGAGTCAGAACTAGCTGACTTAGGAGTTACTTGTGTGTCTTTATTTATGGCAGGGAAAATACCTGATATTTCACTTCATGTGAACAATTTTGTTACGTTTTGTGAAGACAGCATTGTCAAACCACTTGGGATGCAGAATTTGTTGCCGGTTCTAAAATGTCAGGTATGATGGTGAGTTTTCCCTGCTGATCAGTTTTGAGTTTGGTACATTAGATTGTGTTTTTGTTAGAACTTTCAGTCAACCAAAACTTTCAAATGAATGTTGTGTTTAGATGATCAAAAGGAGTACTGCACTTATTTTACAATTATTGTTGGTGTAATTTCCCAAATAAAAGTATGATCTGGGACTCTGTTGAGTGTGAAAACTTTAAGTTGCAGAAGTACTGGAAACGTGTAAGAGTACTTTAGTTAGGGTTGAATTTCTTTCCACTACTTGTTATTACTATGTTTTTGGCCAATTGAATATGATGTTTAATAAATTTATATGTGGCAGGGAAATATTGAGATGAGATCTCCAGTTTTGGCGTTTCTTTTAGCTAATGTATTTACATTTTCCGCACCATTGAAAGCAATGGCTGAAACTTGCGAGGCTGAAAATTCTGCTTTCAACATGCCAATACTTCTTTCTGTCGCCCTTGTAGGGGCTACTGTTGGAGGTAAGGGTCCTTGATGATATGTAGGATAGTTATCACTTGATCACTTGTATAGATATTTATCTCTCAGTAATCTAGAAGAGAAACTTAACGACTCAGCTTTTGATCCTTGTGCACAGCATCATTGTTTTTTTCCCCACTTATTAGTTTTGATGGGGTAGGCGTGGAAAGGGGAATGATAAGCAGAATAATCCACTCTAAAATTTCCCATTCAATTCCAAACAAAAACTGTTGGCCTTTCACTTATGGCCAAATTTATTTGTTTTAAAGGGTGGAAAAAATGTGGATGAGAAGTAATTTGCTGGGTTTCACTATTAATTTCTACTTGTTCCATAGTAATTATCCTTTGCTATATATCTTGTGAAAATTTTACATTTCTAGCTGAATTGGGAACATAAAACATATTTAATTTATAAAACTTTTAATAGGGTTACTTGCTCGGCAAAGAAGGGGAGAGTTGAAGCGATTGAATGAACAACTTCGACAGATTAATGCAGCACTAAGAAGGCAAGCAAAAATTGAGTCTTATGCTCCCACCTTAAGTTATTCTCCTGTTGGTGGAAGAATACTCGAGAGCGATGTTATTGTTGATCCAAGGAAGGAGGAGTTGATCTCGCGATTGAAGTCTGGAAAGAACTTTTTGAGAAATCAAGACCCAGAGAAGGCATTTGTGGAGTTTAAGACTGCTCTTGAGCTTGCTCAGGTTCTACAGGATCCGACTGAGGAGAAGAAGGCTGCAAGGGGTTTAGGTTTGTCTTTGATCTCCTATTTAACTTCTTCTTTCTTATATTTCTTAAAAGACTGAGCTTCTTTTTATTGTCATGAAAAAGTCATTCTTTGATATCTATAATATTTTACTGGGAGCCGATCGCCAAAATTATCCACATGCATATTACATATACGCGGAAGTCCTGTATTTTCCTTATTTATTAGATTCATAAGTAAGGCTAATTTCCTGTTCTTATTCCTTCTACGAAAACAAGGAAGTTGTTATACGAAATCAAGGAATAGTTCTTGAACAATGATTTGTTCATTGGATTTGATTCCTTGAAAACCAACATGTTGAATCTTTAACTGTCTACCTGCATCAATCTCCTTGTATGTATACAAAGCTGCATTCTGGCTTTTCACCAATCAATAACCCTCTTCAAAGGGCATTCTCATGGGAGGAAGTCTCGGTTATAGGAGGTGTAAGTCTTTTTCTGTAGGATGCACAAACCATTCGTGTATCGAAGGGGAGGCATCGACCGTGATATTTAAAATTGGAGTCCCACCTGGCCTTGGAGCTGCCTTGAAAGCCTTCTAAAATCAGTTTCTTCTGTTAATTTCATCAGGTTATGCACCTAGATAAGGGCTAGCGTTAGCAATGTTGCCTTTCATGATCTATGCATATTTTTCTCCACAACTTTGTTTCTACGTCAACTGCAATATAAAATGTTATTATTGTGGAGCAATTGTTGGTCTCACTTTGATACGAATTGGGATTGAATCTTTCAGGGGCTTCACTGCAGAGGCAGGGAAAGTACCGAGAAGCAATCAAATACCATTCATTGGTGTTGGCAATCTCTGAACGAGAAGGAGAACAATCAGGAAACACTGAAGCTTTTGGAGCAATTGCTGATTGCTACACTGAACTTGGGGATCTTGAGAAAGCTGCCTACTATTATGATAAGTACATAGCGAGGCTGGAAACAGACTGA ATGGCGATGGCAATGCGTTGCTCTTGCTTCCTTTCCCGCCCGAATTCCCCGCGATCTCCTCCCTCTGATCAATTATTGAGGAAAATCCATGTTTCCGACAGCATTGTCAAACCACTTGGGATGCAGAATTTGTTGCCGGTTCTAAAATGTCAGGGAAATATTGAGATGAGATCTCCAGTTTTGGCGTTTCTTTTAGCTAATGTATTTACATTTTCCGCACCATTGAAAGCAATGGCTGAAACTTGCGAGGCTGAAAATTCTGCTTTCAACATGCCAATACTTCTTTCTGTCGCCCTTGTAGGGGCTACTGTTGGAGGGTTACTTGCTCGGCAAAGAAGGGGAGAGTTGAAGCGATTGAATGAACAACTTCGACAGATTAATGCAGCACTAAGAAGGCAAGCAAAAATTGAGTCTTATGCTCCCACCTTAAGTTATTCTCCTGTTGGTGGAAGAATACTCGAGAGCGATGTTATTGTTGATCCAAGGAAGGAGGAGTTGATCTCGCGATTGAAGTCTGGAAAGAACTTTTTGAGAAATCAAGACCCAGAGAAGGCATTTGTGGAGTTTAAGACTGCTCTTGAGCTTGCTCAGGTTCTACAGGATCCGACTGAGGAGAAGAAGGCTGCAAGGGGTTTAGGGGCTTCACTGCAGAGGCAGGGAAAGTACCGAGAAGCAATCAAATACCATTCATTGGTGTTGGCAATCTCTGAACGAGAAGGAGAACAATCAGGAAACACTGAAGCTTTTGGAGCAATTGCTGATTGCTACACTGAACTTGGGGATCTTGAGAAAGCTGCCTACTATTATGATAAGTACATAGCGAGGCTGGAAACAGACTGA ATGGCGATGGCAATGCGTTGCTCTTGCTTCCTTTCCCGCCCGAATTCCCCGCGATCTCCTCCCTCTGATCAATTATTGAGGAAAATCCATGTTTCCGACAGCATTGTCAAACCACTTGGGATGCAGAATTTGTTGCCGGTTCTAAAATGTCAGGGAAATATTGAGATGAGATCTCCAGTTTTGGCGTTTCTTTTAGCTAATGTATTTACATTTTCCGCACCATTGAAAGCAATGGCTGAAACTTGCGAGGCTGAAAATTCTGCTTTCAACATGCCAATACTTCTTTCTGTCGCCCTTGTAGGGGCTACTGTTGGAGGGTTACTTGCTCGGCAAAGAAGGGGAGAGTTGAAGCGATTGAATGAACAACTTCGACAGATTAATGCAGCACTAAGAAGGCAAGCAAAAATTGAGTCTTATGCTCCCACCTTAAGTTATTCTCCTGTTGGTGGAAGAATACTCGAGAGCGATGTTATTGTTGATCCAAGGAAGGAGGAGTTGATCTCGCGATTGAAGTCTGGAAAGAACTTTTTGAGAAATCAAGACCCAGAGAAGGCATTTGTGGAGTTTAAGACTGCTCTTGAGCTTGCTCAGGTTCTACAGGATCCGACTGAGGAGAAGAAGGCTGCAAGGGGTTTAGGGGCTTCACTGCAGAGGCAGGGAAAGTACCGAGAAGCAATCAAATACCATTCATTGGTGTTGGCAATCTCTGAACGAGAAGGAGAACAATCAGGAAACACTGAAGCTTTTGGAGCAATTGCTGATTGCTACACTGAACTTGGGGATCTTGAGAAAGCTGCCTACTATTATGATAAGTACATAGCGAGGCTGGAAACAGACTGA MAMAMRCSCFLSRPNSPRSPPSDQLLRKIHVSDSIVKPLGMQNLLPVLKCQGNIEMRSPVLAFLLANVFTFSAPLKAMAETCEAENSAFNMPILLSVALVGATVGGLLARQRRGELKRLNEQLRQINAALRRQAKIESYAPTLSYSPVGGRILESDVIVDPRKEELISRLKSGKNFLRNQDPEKAFVEFKTALELAQVLQDPTEEKKAARGLGASLQRQGKYREAIKYHSLVLAISEREGEQSGNTEAFGAIADCYTELGDLEKAAYYYDKYIARLETD Homology
BLAST of Csor.00g179310 vs. ExPASy Swiss-Prot
Match: Q940U6 (Protein FLUORESCENT IN BLUE LIGHT, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FLU PE=1 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 4.9e-90 Identity = 172/230 (74.78%), Postives = 202/230 (87.83%), Query Frame = 0
BLAST of Csor.00g179310 vs. NCBI nr
Match: KAG6606670.1 (Protein FLUORESCENT IN BLUE LIGHT, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 536 bits (1382), Expect = 6.05e-192 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of Csor.00g179310 vs. NCBI nr
Match: XP_022949417.1 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 534 bits (1375), Expect = 7.06e-191 Identity = 276/279 (98.92%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of Csor.00g179310 vs. NCBI nr
Match: XP_023525428.1 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 533 bits (1373), Expect = 1.43e-190 Identity = 276/279 (98.92%), Postives = 278/279 (99.64%), Query Frame = 0
BLAST of Csor.00g179310 vs. NCBI nr
Match: KAG7036391.1 (Protein FLUORESCENT IN BLUE LIGHT, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 525 bits (1353), Expect = 3.09e-187 Identity = 279/297 (93.94%), Postives = 279/297 (93.94%), Query Frame = 0
BLAST of Csor.00g179310 vs. NCBI nr
Match: XP_022949416.1 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 523 bits (1346), Expect = 3.60e-186 Identity = 276/297 (92.93%), Postives = 279/297 (93.94%), Query Frame = 0
BLAST of Csor.00g179310 vs. ExPASy TrEMBL
Match: A0A6J1GBY6 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452770 PE=4 SV=1) HSP 1 Score: 534 bits (1375), Expect = 3.42e-191 Identity = 276/279 (98.92%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of Csor.00g179310 vs. ExPASy TrEMBL
Match: A0A6J1GBY8 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452770 PE=4 SV=1) HSP 1 Score: 523 bits (1346), Expect = 1.74e-186 Identity = 276/297 (92.93%), Postives = 279/297 (93.94%), Query Frame = 0
BLAST of Csor.00g179310 vs. ExPASy TrEMBL
Match: A0A6J1K7B0 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492924 PE=4 SV=1) HSP 1 Score: 509 bits (1310), Expect = 5.34e-181 Identity = 271/297 (91.25%), Postives = 274/297 (92.26%), Query Frame = 0
BLAST of Csor.00g179310 vs. ExPASy TrEMBL
Match: A0A0A0L9E8 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G645960 PE=4 SV=1) HSP 1 Score: 471 bits (1213), Expect = 3.20e-166 Identity = 249/297 (83.84%), Postives = 265/297 (89.23%), Query Frame = 0
BLAST of Csor.00g179310 vs. ExPASy TrEMBL
Match: A0A6J1D4T4 (protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016954 PE=4 SV=1) HSP 1 Score: 471 bits (1212), Expect = 4.88e-166 Identity = 247/297 (83.16%), Postives = 264/297 (88.89%), Query Frame = 0
BLAST of Csor.00g179310 vs. TAIR 10
Match: AT3G14110.2 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 333.6 bits (854), Expect = 1.6e-91 Identity = 173/230 (75.22%), Postives = 202/230 (87.83%), Query Frame = 0
BLAST of Csor.00g179310 vs. TAIR 10
Match: AT3G14110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 332.4 bits (851), Expect = 3.5e-91 Identity = 172/230 (74.78%), Postives = 202/230 (87.83%), Query Frame = 0
BLAST of Csor.00g179310 vs. TAIR 10
Match: AT3G14110.3 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 331.3 bits (848), Expect = 7.7e-91 Identity = 171/225 (76.00%), Postives = 200/225 (88.89%), Query Frame = 0
BLAST of Csor.00g179310 vs. TAIR 10
Match: AT3G16760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 49.7 bits (117), Expect = 4.5e-06 Identity = 23/64 (35.94%), Postives = 38/64 (59.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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