Csor.00g178650 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g178650
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein .
Location	Csor_Chr09: 3270456 .. 3272637 (+)
RNA-Seq Expression	Csor.00g178650
Synteny	Csor.00g178650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCGCTTCAGAGTTCTTCACCGTCGAATCGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACGAGTTCCCTCCAATTTCACTCTCTTCCTTCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTCGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCTAAGGGGCGAGAGAAATTGACAAGGGAGGACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATGCGAATTTTTTGCCTGATAACAAACTGGTTCTGAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTGGCAGAGACAATCAAGAAATTGCGAAGTAAGAAGAGTTTATGTTGTCAGTCTTGTGAATTTTCATCGTCAATGCGTTAATATTGATATCTCTGTTTCGGTTTTTGTGCAATTTTGTTTGAAAATTTGTGAGTAGATCATGTGTCTGATGTAGTGGATAGCTCTTGATCTCTTGCCACCAACGATTTCATCTATGAAGTATGAAATGCTAAGCAATTCAGAATAGGTGGGAGAATAAACCAAATCTTACGTAATTGGAGACAAAAAATTAGTATTATTTGGAAATTCATGCTTGTAAGTCATTTAATGTCAATTTAGCAAATGGTGATGTGAAACTGCTGAAGCTAATTCCGATGAATCATGTGTATTTTTTAGCCTGTGCATTGACATGGGGAAACTATCCTTAGTTCTAGTTTTGAAATTTTTCAAAACATGCTCTTATACATCTTGTGGCAATCAAGACGAAGAAGAAATCGAGGTGATTTGGTTGGTTTGAGAAGATATTGTGTTCATGTTTGCTTTTAAAATAAGAAACTGTTATTAGTTTCTGTTAGGGGTCAGATTACTCCAACTATATTTAGTATCATAAATGTAAAAATCTTAGTATGAATCATTCTCAGATGCATTATTTTTTTGGGTAAAATTCTTAGATGTTGATAGTTAAGGGTACGAAAGCTATGAAAAATAAGGACGATGGTGAGAGGTTTTCACACCCTTACAAATAAACGTGCGTCTACTAGGGAGAAGTTATCGCACCCTTATAAAGAATATTTCGTTCTCCTCCCCAACTGACGTGGAATCTTATAATCAGAATTTTGTTTTCATTATTCAAATATGATAATATTGGCTGTTATTACTATTCCGAACCATTGTTTTTTGCTGGGTTTGTTGGTTGATAGAGGTTGTTTGGTTCAAATGGTTCAATTTTCAAAATTTGTTGTACTCTTATGTCTCTCTAGTCGGTTCAATGTTGATGTTCATCTACCAAACTGACAATAGTTCAATTGGTTTTGGCATTAGTAATCCTCCACCAAAAAGTTATTCACCTAAGATATAACCGACCTGAACCGACCTCTAGTGCAAATTGTGCTGCTGCTGATGTCTGTGCTTGTCATTTTGTTTACCTGCTGCTTGATAATTGCTTGAAGCCTTATGCTACTCATAATTTCAAGCTTTTGAAGGAAATAATGTTTTCTATTCCATCTTTCTGGTTCTGGCAGTTGTGTTTCATTATGAAGACATACCCCTATTGTTTCACGTCTTGAACTCTGAGTCTTGGGATTTTCAGATGGTTGTCTGGCAGTGACCTGAGAAAGGTTGCTTTATTTGGATGCCCATCCATTGCTAGAAGAGATGTTTTTGCTGCTAAAAGATTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTAAGCAAAAGCTCAGAAATCATTACTTCCCTTCTTCTATTACCATTTAAATCTTTGTTTTCTTCTCTCTTCAAATTATCCGCAGGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCAGTCGTTATGCAGGTTATTACTCAATATGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGAACTAG

mRNA sequence

ATGTCTCGCTTCAGAGTTCTTCACCGTCGAATCGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACGAGTTCCCTCCAATTTCACTCTCTTCCTTCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTCGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCTAAGGGGCGAGAGAAATTGACAAGGGAGGACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATGCGAATTTTTTGCCTGATAACAAACTGGTTCTGAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTGGCAGAGACAATCAAGAAATTGCGAAATGGTTGTCTGGCAGTGACCTGAGAAAGGTTGCTTTATTTGGATGCCCATCCATTGCTAGAAGAGATGTTTTTGCTGCTAAAAGATTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCAGTCGTTATGCAGGTTATTACTCAATATGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGAACTAG

Coding sequence (CDS)

ATGTCTCGCTTCAGAGTTCTTCACCGTCGAATCGATTCCCAACTTGGAAGCTATTTCTTCAGTTCACAGTCTACGAGTTCCCTCCAATTTCACTCTCTTCCTTCTACTTCTCGAAGATCTCGAACTTTCTCGCCGAAAATCGATGGCGGGATCGGACCAGAAATTGTAGATGTGAAGAGGAATATACGTTCGGATTCTGTGGTTAACCAAGGCGCGAGATCGGGCGGAAGTAGAAATGAGGACAATGTGCTGAAAGGGAGAGTGGATTCTAAGGGGCGAGAGAAATTGACAAGGGAGGACGCTTTGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACATTTATACAGGGAAGGATATTTTAATTATGCGAATTTTTTGCCTGATAACAAACTGGTTCTGAGTTACTTTGAATGTCGTCATGGACGGGATTTTATCAAGTCTGCAGCTGAGCGGTTTGGCAGAGACAATCAAGAAATTGCGAAATGGTTGTCTGGCAGTGACCTGAGAAAGGTTGCTTTATTTGGATGCCCATCCATTGCTAGAAGAGATGTTTTTGCTGCTAAAAGATTGCGAAAATTCTTTAGAATCCAAGAAGACACAGTTTGTCACAATTGCACCTTGAGACAGTCATGCAAGTATGTGAATCAAGGTGTTTGGAATTGCGGCACCAAGAATTTAAATTTGGCAGTCGTTATGCAGGTTATTACTCAATATGACTTGCAAGCTATACCAAAACAACTTATAATACCTGAAGACATTAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAAACTGAGCCCGACCGTGTCGAGGAACTAG

Protein sequence

MSRFRVLHRRIDSQLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKRNIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGCPSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN

Homology

[Close]

BLAST of Csor.00g178650 vs. NCBI nr
Match: KAG6591767.1 (hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 542 bits (1397), Expect = 2.90e-194
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFRVLHRRIDSQLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR
Sbjct: 1   MSRFRVLHRRIDSQLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60

Query: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120
           NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR
Sbjct: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120

Query: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180
           EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC
Sbjct: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180

Query: 181 PSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240
           PSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT
Sbjct: 181 PSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240

Query: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278
           QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN
Sbjct: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

[Close]

BLAST of Csor.00g178650 vs. NCBI nr
Match: KAG7024649.1 (hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 538 bits (1386), Expect = 1.38e-192
Identity = 276/278 (99.28%), Postives = 276/278 (99.28%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFRVLHRRIDSQLGSYFFSSQS SSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR
Sbjct: 1   MSRFRVLHRRIDSQLGSYFFSSQSMSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60

Query: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120
           NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR
Sbjct: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120

Query: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180
           EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC
Sbjct: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180

Query: 181 PSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240
           PS ARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT
Sbjct: 181 PSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240

Query: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278
           QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN
Sbjct: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

[Close]

BLAST of Csor.00g178650 vs. NCBI nr
Match: XP_022935982.1 (uncharacterized protein LOC111442720 [Cucurbita moschata])

HSP 1 Score: 533 bits (1372), Expect = 1.87e-190
Identity = 273/278 (98.20%), Postives = 275/278 (98.92%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFRVLHRRIDSQLGSYFFSSQST+SLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR
Sbjct: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60

Query: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120
           NIR DSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR
Sbjct: 61  NIRLDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120

Query: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180
           EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC
Sbjct: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180

Query: 181 PSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240
           PS ARRDVFAAKRLRKFF IQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT
Sbjct: 181 PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240

Query: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278
           QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSR+
Sbjct: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 278

[Close]

BLAST of Csor.00g178650 vs. NCBI nr
Match: XP_023536478.1 (uncharacterized protein LOC111797643 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 527 bits (1358), Expect = 2.55e-188
Identity = 270/278 (97.12%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFRVLHRRIDSQLGSYFFSSQST+SLQFHSL STSRRSRTF P+IDGGIGPEIVDVKR
Sbjct: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLSSTSRRSRTFLPEIDGGIGPEIVDVKR 60

Query: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120
           NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVR+LYR
Sbjct: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRYLYR 120

Query: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180
           EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC
Sbjct: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180

Query: 181 PSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240
           PS ARRDVFAAKRLRKFF IQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT
Sbjct: 181 PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240

Query: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278
           QYDLQAIPKQLI+PEDIKASVSRLLKEILKLSPTVSRN
Sbjct: 241 QYDLQAIPKQLIVPEDIKASVSRLLKEILKLSPTVSRN 278

[Close]

BLAST of Csor.00g178650 vs. NCBI nr
Match: XP_022976827.1 (uncharacterized protein LOC111477088 [Cucurbita maxima])

HSP 1 Score: 527 bits (1357), Expect = 3.62e-188
Identity = 270/278 (97.12%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFRVLHRRIDSQLGSYFFSSQST+SLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR
Sbjct: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60

Query: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120
           NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGRE L RE+ALVRKELSPDMEMFVRHLYR
Sbjct: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREILKRENALVRKELSPDMEMFVRHLYR 120

Query: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180
           EGYFNY+NFLPDNKLVLSYFECRHGRDFIKSAAERF RDNQEIAKWLSGSDLRKVALFGC
Sbjct: 121 EGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVALFGC 180

Query: 181 PSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240
           PS ARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVM+VIT
Sbjct: 181 PSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMKVIT 240

Query: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278
           QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN
Sbjct: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

[Close]

BLAST of Csor.00g178650 vs. ExPASy TrEMBL
Match: A0A6J1F747 (uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC111442720 PE=4 SV=1)

HSP 1 Score: 533 bits (1372), Expect = 9.07e-191
Identity = 273/278 (98.20%), Postives = 275/278 (98.92%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFRVLHRRIDSQLGSYFFSSQST+SLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR
Sbjct: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60

Query: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120
           NIR DSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR
Sbjct: 61  NIRLDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120

Query: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180
           EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC
Sbjct: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180

Query: 181 PSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240
           PS ARRDVFAAKRLRKFF IQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT
Sbjct: 181 PSTARRDVFAAKRLRKFFSIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240

Query: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278
           QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSR+
Sbjct: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRD 278

[Close]

BLAST of Csor.00g178650 vs. ExPASy TrEMBL
Match: A0A6J1IGS8 (uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088 PE=4 SV=1)

HSP 1 Score: 527 bits (1357), Expect = 1.75e-188
Identity = 270/278 (97.12%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFRVLHRRIDSQLGSYFFSSQST+SLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR
Sbjct: 1   MSRFRVLHRRIDSQLGSYFFSSQSTNSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60

Query: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREKLTREDALVRKELSPDMEMFVRHLYR 120
           NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGRE L RE+ALVRKELSPDMEMFVRHLYR
Sbjct: 61  NIRSDSVVNQGARSGGSRNEDNVLKGRVDSKGREILKRENALVRKELSPDMEMFVRHLYR 120

Query: 121 EGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGC 180
           EGYFNY+NFLPDNKLVLSYFECRHGRDFIKSAAERF RDNQEIAKWLSGSDLRKVALFGC
Sbjct: 121 EGYFNYSNFLPDNKLVLSYFECRHGRDFIKSAAERFSRDNQEIAKWLSGSDLRKVALFGC 180

Query: 181 PSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMQVIT 240
           PS ARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVM+VIT
Sbjct: 181 PSTARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNLAVVMKVIT 240

Query: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278
           QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN
Sbjct: 241 QYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278

[Close]

BLAST of Csor.00g178650 vs. ExPASy TrEMBL
Match: A0A0A0L4J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1)

HSP 1 Score: 390 bits (1003), Expect = 1.40e-134
Identity = 212/286 (74.13%), Postives = 230/286 (80.42%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFR LH +I        F+SQST SLQFH LPSTSR   +FS  I   I PEIV   R
Sbjct: 1   MSRFRPLHSQIQ------LFNSQSTISLQFHLLPSTSR---SFSLNIGERIAPEIVPGNR 60

Query: 61  NIRSDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREKLTREDALVRKELSPDME 120
           N     +  + A S GS        RNE+ VLKG+V S+G +KLTREDAL+RK+LSPDME
Sbjct: 61  NTPPPFLCREAANSDGSVKSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDME 120

Query: 121 MFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDL 180
           MFVRHLY+EGYFNYANFLPDNK VLSYFECRHGRDFIKSAA+RFGRDNQEIAKWLSGSDL
Sbjct: 121 MFVRHLYQEGYFNYANFLPDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDL 180

Query: 181 RKVALFGCPSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNL 240
           RKVA FGCPS AR+DVFAAKRLRKFFRIQEDTVCH C LRQSCKYVNQGVWN  TKNLNL
Sbjct: 181 RKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNL 240

Query: 241 AVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278
            VV+QV TQY L+AIP+QLIIPED+KASVSRLLKEIL LSPTVSRN
Sbjct: 241 GVVLQVTTQYALEAIPEQLIIPEDVKASVSRLLKEILNLSPTVSRN 277

[Close]

BLAST of Csor.00g178650 vs. ExPASy TrEMBL
Match: A0A5A7VHD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00760 PE=4 SV=1)

HSP 1 Score: 380 bits (975), Expect = 2.56e-130
Identity = 210/286 (73.43%), Postives = 227/286 (79.37%), Query Frame = 0


Query: 1   MSRFRVLHRRIDSQLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDVKR 60
           MSRFR L+ +I        F+SQST SLQFH LPSTSR   +FS KI  GI PEIV  K 
Sbjct: 1   MSRFRPLYSQI------LLFNSQSTISLQFHLLPSTSR---SFSLKIGEGIEPEIVPAKT 60

Query: 61  NIRSDSVVNQGARSGGS--------RNEDNVLKGRVDSKGREKLTREDALVRKELSPDME 120
           N     +  + A S GS         NE+ VLKG+V S+G +KL REDAL+RKELSPDME
Sbjct: 61  NTPPAFLSREAANSNGSVKSLEGKGGNEETVLKGKVGSEGNKKLAREDALLRKELSPDME 120

Query: 121 MFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDL 180
           MF RHLYREGYFNYANFLP NK VLSYFECR GR+FIKS A+RFGRDNQEIAKWLSGSDL
Sbjct: 121 MFARHLYREGYFNYANFLPVNKFVLSYFECRRGRNFIKSTAQRFGRDNQEIAKWLSGSDL 180

Query: 181 RKVALFGCPSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCKYVNQGVWNCGTKNLNL 240
           RKVALFGCPS AR+DVFAAKRLRKFFRIQEDTVCH C LRQSCKYVNQGVWN  TKNLNL
Sbjct: 181 RKVALFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNL 240

Query: 241 AVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTVSRN 278
            VV+QVITQY L+AIP+QLIIPEDIKASVSRLLKEIL LS TVSRN
Sbjct: 241 GVVLQVITQYALEAIPEQLIIPEDIKASVSRLLKEILNLSQTVSRN 277

[Close]

BLAST of Csor.00g178650 vs. ExPASy TrEMBL
Match: A0A6J1CC23 (uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009818 PE=4 SV=1)

HSP 1 Score: 289 bits (739), Expect = 1.72e-93
Identity = 168/264 (63.64%), Postives = 184/264 (69.70%), Query Frame = 0


Query: 1   MSRFRVLHRRIDS--QLGSYFFSSQSTSSLQFHSLPSTSRRSRTFSPKIDGGIGPEIVDV 60
           MS+FR LHR IDS  +L  +FF SQS+ SLQ H+L S SRR+R FS KI+ GIGPEIVDV
Sbjct: 1   MSQFRALHRHIDSYLKLRYHFFCSQSSHSLQVHTLTSISRRTRNFSLKIEEGIGPEIVDV 60

Query: 61  KRNIRSDSVVNQGARSGGS--------RNEDNVLKG------------RVDSKGREKLTR 120
            R+IR+D VV+   RS  S        RN+DNVL+G            R DS G  KLTR
Sbjct: 61  NRDIRTDFVVDGAVRSNRSAECRERERRNQDNVLEGSSGESERGAGWLRADSGGSGKLTR 120

Query: 121 --------------------------EDALVRKELSPDMEMFVRHLYREGYFNYANFLPD 180
                                     EDALVRKELSPD+EM VRHLY EGYF+YANFLPD
Sbjct: 121 KGKPGSLYVLVSKQNGCTERREVRMREDALVRKELSPDIEMLVRHLYGEGYFSYANFLPD 180

Query: 181 NKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALFGCPSIARRDVFAAK 216
           NKLVLSYFE RHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVAL GCPS AR+DVF+AK
Sbjct: 181 NKLVLSYFEYRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVALLGCPSTARKDVFSAK 240

[Close]

BLAST of Csor.00g178650 vs. TAIR 10
Match: AT1G53460.1 (BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). )

HSP 1 Score: 189.5 bits (480), Expect = 3.6e-48
Identity = 96/179 (53.63%), Postives = 127/179 (70.95%), Query Frame = 0


Query: 98  REDAL-VRKELSPDMEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERF 157
           +ED + V KEL  +M  FVR L++EGY N ANF+   KL +   +  + R F+K AAERF
Sbjct: 131 KEDVIRVYKELPIEMVSFVRLLHKEGYLNKANFITGEKLDMGNLDEEYARTFVKFAAERF 190

Query: 158 GRDNQEIAKWLSGSDLRKVALFGCPSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSCK 217
           G+D QEIAKWLSGSDL+K+ LFGCPS+ +R VFAAK LR FF I E+ VC  C L++ CK
Sbjct: 191 GKDYQEIAKWLSGSDLKKIVLFGCPSLEKRAVFAAKTLRNFFDIHENNVCEKCVLKEKCK 250

Query: 218 YVNQGVWNCGTKNLNLAVVMQVITQYDLQAIPKQLIIPEDIKASVSRLLKEILKLSPTV 276
           + NQ VW+  TK+L+L+VVM+VIT Y L     +L +P++++ SVSRLL EI  LS T+
Sbjct: 251 FPNQSVWDGKTKHLHLSVVMKVITLYPLDLTHPKLQVPQEVQDSVSRLLTEIQNLSRTI 309

[Close]

BLAST of Csor.00g178650 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-10
Identity = 39/129 (30.23%), Postives = 68/129 (52.71%), Query Frame = 0


Query: 149 IKSAAERFGRDNQEIAKWLSGSDLRKVALFGCPSIARRDVFAAKRLRKFFRIQEDTVCHN 208
           +++A   FG+D  +I + LS +D++ +   GCP+  R+ VF+ K LRK   + E  VC +
Sbjct: 206 VQNACSNFGKDRFDILRSLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSS 265

Query: 209 CTLRQSCKYVNQGVWNCGTKNLNLAVVMQVITQYDLQAI-----PKQLIIPEDIKASVSR 268
           C+LR SC+     +            +M+++  Y    +      K L+  + +K+ V +
Sbjct: 266 CSLRNSCE--KAFLLTNKEDEARTIDLMRILFTYGFDPLNGTVANKSLLKKKSVKSVVRK 325

Query: 269 LLKEILKLS 273
           LL EI+KLS
Sbjct: 326 LLHEIVKLS 332

[Close]

BLAST of Csor.00g178650 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 58.9 bits (141), Expect = 7.4e-09
Identity = 34/107 (31.78%), Postives = 53/107 (49.53%), Query Frame = 0


Query: 109 PDMEMFVRHLYREGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLS 168
           P+   FV  L  +GYF       D +    Y E       +K A   F RD  ++ + LS
Sbjct: 63  PEWITFVDRLKTKGYFT-----KDTEDDTVYQE----MILVKDACLSFARDRYDVLRSLS 122

Query: 169 GSDLRKVALFGCPSIARRDVFAAKRLRKFFRIQEDTVCHNCTLRQSC 216
             D++ +   GCP++ R+ V ++KR+R   ++ E  VC +C LR SC
Sbjct: 123 SGDVQALVERGCPNLFRKTVNSSKRIRAHVKLNEGDVCGSCDLRSSC 160

The following BLAST results are available for this feature:

BLAST of Csor.00g178650 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g178650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591767.1	2.90e-194	100.00	hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7024649.1	1.38e-192	99.28	hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022935982.1	1.87e-190	98.20	uncharacterized protein LOC111442720 [Cucurbita moschata]	[more]
XP_023536478.1	2.55e-188	97.12	uncharacterized protein LOC111797643 [Cucurbita pepo subsp. pepo]	[more]
XP_022976827.1	3.62e-188	97.12	uncharacterized protein LOC111477088 [Cucurbita maxima]	[more]

BLAST of Csor.00g178650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F747	9.07e-191	98.20	uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC1114427...	[more]
A0A6J1IGS8	1.75e-188	97.12	uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088...	[more]
A0A0A0L4J9	1.40e-134	74.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1	[more]
A0A5A7VHD0	2.56e-130	73.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1CC23	1.72e-93	63.64	uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]

BLAST of Csor.00g178650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53460.1	3.6e-48	53.63	BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfa...	[more]
AT1G55040.1	2.3e-10	30.23	zinc finger (Ran-binding) family protein	[more]
AT1G48570.1	7.4e-09	31.78	zinc finger (Ran-binding) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..90
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 82..271
None	No IPR available	PANTHER	PTHR23111:SF24	OS01G0203300 PROTEIN	coord: 82..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g178650.m01	Csor.00g178650.m01	mRNA