![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Csor.00g178480 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAACGCACGCCGAGCATGACGGAGATCACCTTCGATCTGGGCAGCTCCGCCACCGACCAATTACCACCGCCGTCGCTTGGTTACTCAACAAACACCCAAAAAATGGTGTCCCCAAGAAATTACAGACGCCACTCAGTTGATCTAATTCAAGACAACGCTAATTTCCTCAGAGCTTGTTCTCTTTGCACTCGCCCTCTCGTCCCTGGCCGCGATATTTACATGTACAGGTAAATCAATTTAAATCCAATCCGATTTTTACAATATGGGTTTTGAAAATGGACTCTGTTTTTCAGGGGAGACAGGGGATTTTGCAGCGACGAATGTAGACAAAAGCAAATGAAACAAGACGAACGAATCGAGAAGTGCAGTTTAGCTTCAAAGAAAGCAGCAGCAGCAGCAGCGGCGGCGGCGGCGGCGGCGGTGGTGGTTTCTAAATCGGTGGCCGTTCAGACCCAGATCTCCGGCAAGGGAGAAACAGTAGCTGCTTCATAG ATGAAACGCACGCCGAGCATGACGGAGATCACCTTCGATCTGGGCAGCTCCGCCACCGACCAATTACCACCGCCGTCGCTTGGTTACTCAACAAACACCCAAAAAATGGTGTCCCCAAGAAATTACAGACGCCACTCAGTTGATCTAATTCAAGACAACGCTAATTTCCTCAGAGCTTGTTCTCTTTGCACTCGCCCTCTCGTCCCTGGCCGCGATATTTACATGTACAGGGGAGACAGGGGATTTTGCAGCGACGAATGTAGACAAAAGCAAATGAAACAAGACGAACGAATCGAGAAGTGCAGTTTAGCTTCAAAGAAAGCAGCAGCAGCAGCAGCGGCGGCGGCGGCGGCGGCGGTGGTGGTTTCTAAATCGGTGGCCGTTCAGACCCAGATCTCCGGCAAGGGAGAAACAGTAGCTGCTTCATAG ATGAAACGCACGCCGAGCATGACGGAGATCACCTTCGATCTGGGCAGCTCCGCCACCGACCAATTACCACCGCCGTCGCTTGGTTACTCAACAAACACCCAAAAAATGGTGTCCCCAAGAAATTACAGACGCCACTCAGTTGATCTAATTCAAGACAACGCTAATTTCCTCAGAGCTTGTTCTCTTTGCACTCGCCCTCTCGTCCCTGGCCGCGATATTTACATGTACAGGGGAGACAGGGGATTTTGCAGCGACGAATGTAGACAAAAGCAAATGAAACAAGACGAACGAATCGAGAAGTGCAGTTTAGCTTCAAAGAAAGCAGCAGCAGCAGCAGCGGCGGCGGCGGCGGCGGCGGTGGTGGTTTCTAAATCGGTGGCCGTTCAGACCCAGATCTCCGGCAAGGGAGAAACAGTAGCTGCTTCATAG MKRTPSMTEITFDLGSSATDQLPPPSLGYSTNTQKMVSPRNYRRHSVDLIQDNANFLRACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERIEKCSLASKKAAAAAAAAAAAAVVVSKSVAVQTQISGKGETVAAS Homology
BLAST of Csor.00g178480 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 5.7e-18 Identity = 71/165 (43.03%), Postives = 85/165 (51.52%), Query Frame = 0
BLAST of Csor.00g178480 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.2e-14 Identity = 61/143 (42.66%), Postives = 76/143 (53.15%), Query Frame = 0
BLAST of Csor.00g178480 vs. ExPASy Swiss-Prot
Match: F4JW68 (FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.5e-12 Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of Csor.00g178480 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 5.1e-11 Identity = 36/78 (46.15%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Csor.00g178480 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.9e-10 Identity = 42/107 (39.25%), Postives = 55/107 (51.40%), Query Frame = 0
BLAST of Csor.00g178480 vs. NCBI nr
Match: KAG6591750.1 (FCS-Like Zinc finger 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 265 bits (678), Expect = 3.77e-89 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of Csor.00g178480 vs. NCBI nr
Match: KAG7024632.1 (hypothetical protein SDJN02_13450 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 261 bits (666), Expect = 3.70e-87 Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of Csor.00g178480 vs. NCBI nr
Match: XP_023535734.1 (uncharacterized protein LOC111797073 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 255 bits (652), Expect = 4.40e-85 Identity = 137/142 (96.48%), Postives = 138/142 (97.18%), Query Frame = 0
BLAST of Csor.00g178480 vs. NCBI nr
Match: XP_022937229.1 (uncharacterized protein LOC111443579 [Cucurbita moschata]) HSP 1 Score: 253 bits (645), Expect = 4.64e-84 Identity = 135/142 (95.07%), Postives = 136/142 (95.77%), Query Frame = 0
BLAST of Csor.00g178480 vs. NCBI nr
Match: XP_022975921.1 (uncharacterized protein LOC111476480 [Cucurbita maxima]) HSP 1 Score: 250 bits (639), Expect = 4.37e-83 Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0
BLAST of Csor.00g178480 vs. ExPASy TrEMBL
Match: A0A6J1FAL0 (uncharacterized protein LOC111443579 OS=Cucurbita moschata OX=3662 GN=LOC111443579 PE=3 SV=1) HSP 1 Score: 253 bits (645), Expect = 2.25e-84 Identity = 135/142 (95.07%), Postives = 136/142 (95.77%), Query Frame = 0
BLAST of Csor.00g178480 vs. ExPASy TrEMBL
Match: A0A6J1IFI1 (uncharacterized protein LOC111476480 OS=Cucurbita maxima OX=3661 GN=LOC111476480 PE=3 SV=1) HSP 1 Score: 250 bits (639), Expect = 2.11e-83 Identity = 139/142 (97.89%), Postives = 139/142 (97.89%), Query Frame = 0
BLAST of Csor.00g178480 vs. ExPASy TrEMBL
Match: A0A1S3B9M7 (uncharacterized protein LOC103487542 OS=Cucumis melo OX=3656 GN=LOC103487542 PE=3 SV=1) HSP 1 Score: 194 bits (493), Expect = 3.83e-61 Identity = 112/149 (75.17%), Postives = 123/149 (82.55%), Query Frame = 0
BLAST of Csor.00g178480 vs. ExPASy TrEMBL
Match: A0A0A0KYN7 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G378780 PE=3 SV=1) HSP 1 Score: 194 bits (492), Expect = 5.43e-61 Identity = 112/149 (75.17%), Postives = 122/149 (81.88%), Query Frame = 0
BLAST of Csor.00g178480 vs. ExPASy TrEMBL
Match: A0A5D3DC40 (Senescence-associated family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45680G00010 PE=3 SV=1) HSP 1 Score: 186 bits (473), Expect = 2.53e-58 Identity = 109/143 (76.22%), Postives = 117/143 (81.82%), Query Frame = 0
BLAST of Csor.00g178480 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 92.0 bits (227), Expect = 4.0e-19 Identity = 71/165 (43.03%), Postives = 85/165 (51.52%), Query Frame = 0
BLAST of Csor.00g178480 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 80.1 bits (196), Expect = 1.6e-15 Identity = 61/143 (42.66%), Postives = 76/143 (53.15%), Query Frame = 0
BLAST of Csor.00g178480 vs. TAIR 10
Match: AT4G39795.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 72.8 bits (177), Expect = 2.5e-13 Identity = 42/103 (40.78%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of Csor.00g178480 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 68.9 bits (167), Expect = 3.6e-12 Identity = 36/78 (46.15%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Csor.00g178480 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 67.0 bits (162), Expect = 1.4e-11 Identity = 42/107 (39.25%), Postives = 55/107 (51.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|