Csor.00g178000 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g178000
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	XIAP-associated factor 1-like
Location	Csor_Chr09: 2908143 .. 2910640 (-)
RNA-Seq Expression	Csor.00g178000
Synteny	Csor.00g178000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTTGCATCTGAAGAGACCACAAGCATATGCAATCACTGGTATTGTAATTCTGGACGGATGTATAGTTTTTTTTTTTTTTTTTTCGGCAAGAGATCTCTTGATTGGAAATTTTATTTCAATTTATTTTATTTCTGGCGTTGATTTTTGTTGATGTCTTTGTCAATCGCGATTATCGTTTGTGATTGTTTCGGAATTTCGATTTGTTCCTTTCAATTGTGTTTGAGATTTGATTGTTTTGGGGGATAGAACTCTCATCCAATTTAGGCACAAATCTGCCAAGGCAGGATCGTTATTTTGTTTTTTTGATTTGGAAAAAGAACTGTTTGGTAAGAATTTGAATCGCCTGATTATCTTTTCTTCTTCGTGATGAATTTTTATCTGATCCCTTTCCTAGCAGTTGTTCTTCTATTGTGATGATCTGGATGGTAAATGCTTTTATTTCTCCATTTACAGCGGCAGAGACATTCCGTCGACAAATATCGATCTGCATTCTGTTCATTGCGCGCGGAATCTAGAAAAATGTAAAATATGTGGTGATATGGTTCCTAAAAGGCATGCGGAGGAACATTATCTGAACACTCATGCTCCCGTACGATGATTTTTCTTTCAAACTTAGTAAATACCATGGCATTCATATTCTATAGTGCATAAATGAAAGCATAACATTAAGCTTGAGGGTTATTATATTTTCTTTAGATTGCCTTGAGAAGATTCTGCAGCATACAAATTCTCTCTTAAGACTGTTTTGATAAGAATTAGTGGTACTACTCTTAATTTTTGGAATTTCAAGTGCTTATGACCTTATGTTTGGACAGGTTTCCTGTTCGCTGTGTAGCGAGACCATGGAACGGGACATTTTAGCCATTCATAAAGGCGAAAACTGCCCTCAAAGGATTGTCACTTGCGAGTTCTGTGAGTTCCCATTGCCAGCAGTAGATTTGGCTGAGCATCAGGTATGACAAATATTGAATTTTTAGTTAAATGAAAATTTCAAAAGCGATCTCCATGTTATACCTTTGTTGGTTCAAATTTACAGGAAGTATGTGGTAACCGGACCGAACTTTGTCATCTGTGTCGTCGATATATCAGACTACGAGAACGATATAGCCATGAAAATAATTGCAAGGGTGTCACAGCTGCAGATACCGTTGCTGAATCTTCCAGGTATTTCAACTTGCAATTCTTGAAAGTATTCAACATATTCTATACTGATAACTGCTATCTCTCATTGAGCCCCATAGGATGTCGATTTTTGATGCTATATGCAGTTGGTAGTGCTTAGTTTAAGGTTCTGTATAGTTATCCCATGGCTATGGCTTTCTTCTTGTGGATATTGAAAACCATGGAAATTTTAGATACCCTCTTCCATGGATTTCTATGCCCTCTCTTTTCATTATCATATATTAATTAATGTTGATCAATTGGTTATTTAATCTGTCTTAGTATTCATTTGTTACTTCTATAAATATATTTTGAAATTAAATATCTGAACTTTTCAGTCTCAATCTTCACTCATCAAGGAAAAACCAAACCTTTTCACAACTATAGATGTAACCTCCCTTTTCCTTCTAGGCTTCCCCTCAGGGTTTTAAAACGCGTCTATTAGAGAGAGGTTTCCACACCCTTATAAGTAATGTTTCGTTCCCCTCTCCAACCGATGTGGGTTCTTACAATCCACCCCCTTTGGGGACTAGCGTCCTCGCTGAGACACCTCTCGATATCTGGCTTTGATATCATTTGTAACAGCCTAAGCCTACTGTTAGCAGATATTGTCCTCTTTGTACTTTATCTTTTGGGCTTCCCCTCAAGGTTTTAAAATGCATCTACTAGGTAAAGGTTTCCACACTCTTATAAGAAATGTTTAATTCCCCTCTCCAAACGATGTGGGATCTCACAAAAGATGAGTTCCATGGATTCAAGTGCTAAATCTGAAACTTGCACTTTATTTGAAAACATCTCCCTGGTCTTTTGTAAACTTAAACTTCGGCAATAAATGAGTCTTGATGGTATTGTACACGAGTGCCCTGTAATTTGCGTGTTCTTTGTTCTTTCTTCTTCTCAACGGAATGACGAAGGTTAGCATCGTTACATGGCGCACCGATGTGCCTATGCTGCCATTAGGGTTAGCTTCCAATTTATACTGGGTCGGTTAGGAATATACCAGATCGAATGAACTTATAGTATGTGGGTATGATTCGTGGTACAACTTGGAACTCAACCCTCAGTTCTTTACTCACGTTCATAACTTTTCTTATTCTATATGTTCAGTTTGTTATCTTCTAATAACGTGCTTAATCATTCTAAACTGTATCTGAAGGGATGTGGGGGCAGCTCCAGAAAGAGATCAAGTTAGAGATCGAGGCGCTCGACGAAGACAGCCACAGGAGTTTTCTACCCGACGTCTTATATTCACTATTGCAATAACGGGCATTGCCGTTCTACTAGGATCGCTATTTTTCCAGAGAAAGGCCGAGAGCAACATCATGCACTGA

mRNA sequence

ATGGCAGTTGCATCTGAAGAGACCACAAGCATATGCAATCACTGCGGCAGAGACATTCCGTCGACAAATATCGATCTGCATTCTGTTCATTGCGCGCGGAATCTAGAAAAATGTAAAATATGTGGTGATATGGTTCCTAAAAGGCATGCGGAGGAACATTATCTGAACACTCATGCTCCCGTTTCCTGTTCGCTGTGTAGCGAGACCATGGAACGGGACATTTTAGCCATTCATAAAGGCGAAAACTGCCCTCAAAGGATTGTCACTTGCGAGTTCTGTGAGTTCCCATTGCCAGCAGTAGATTTGGCTGAGCATCAGGAAGTATGTGGTAACCGGACCGAACTTTGTCATCTGTGTCGTCGATATATCAGACTACGAGAACGATATAGCCATGAAAATAATTGCAAGGGTGTCACAGCTGCAGATACCGTTGCTGAATCTTCCAGGGATGTGGGGGCAGCTCCAGAAAGAGATCAAGTTAGAGATCGAGGCGCTCGACGAAGACAGCCACAGGAGTTTTCTACCCGACGTCTTATATTCACTATTGCAATAACGGGCATTGCCGTTCTACTAGGATCGCTATTTTTCCAGAGAAAGGCCGAGAGCAACATCATGCACTGA

Coding sequence (CDS)

ATGGCAGTTGCATCTGAAGAGACCACAAGCATATGCAATCACTGCGGCAGAGACATTCCGTCGACAAATATCGATCTGCATTCTGTTCATTGCGCGCGGAATCTAGAAAAATGTAAAATATGTGGTGATATGGTTCCTAAAAGGCATGCGGAGGAACATTATCTGAACACTCATGCTCCCGTTTCCTGTTCGCTGTGTAGCGAGACCATGGAACGGGACATTTTAGCCATTCATAAAGGCGAAAACTGCCCTCAAAGGATTGTCACTTGCGAGTTCTGTGAGTTCCCATTGCCAGCAGTAGATTTGGCTGAGCATCAGGAAGTATGTGGTAACCGGACCGAACTTTGTCATCTGTGTCGTCGATATATCAGACTACGAGAACGATATAGCCATGAAAATAATTGCAAGGGTGTCACAGCTGCAGATACCGTTGCTGAATCTTCCAGGGATGTGGGGGCAGCTCCAGAAAGAGATCAAGTTAGAGATCGAGGCGCTCGACGAAGACAGCCACAGGAGTTTTCTACCCGACGTCTTATATTCACTATTGCAATAACGGGCATTGCCGTTCTACTAGGATCGCTATTTTTCCAGAGAAAGGCCGAGAGCAACATCATGCACTGA

Protein sequence

MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIFTIAITGIAVLLGSLFFQRKAESNIMH

Homology

[Close]

BLAST of Csor.00g178000 vs. ExPASy Swiss-Prot
Match: Q4R970 (TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis OX=9541 GN=TRAFD1 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.0e-23
Identity = 45/130 (34.62%), Postives = 74/130 (56.92%), Query Frame = 0


Query: 6   EETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSL 65
           ++ T +C++C ++IP  N  +H +HC RN+  C IC +  PK   E H    H  V+C  
Sbjct: 7   DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPICKEPFPKSDMETHMAAEHCQVTCK- 66

Query: 66  CSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRL 125
           C++ +E+ +L  H+   CP R+  C+ C+  L  + L EH++ CG RTELC  C R + +
Sbjct: 67  CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLV 126

Query: 126 RERYSHENNC 136
           ++  +H   C
Sbjct: 127 KDLKTHPEVC 135

[Close]

BLAST of Csor.00g178000 vs. ExPASy Swiss-Prot
Match: O14545 (TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens OX=9606 GN=TRAFD1 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.8e-23
Identity = 44/130 (33.85%), Postives = 73/130 (56.15%), Query Frame = 0


Query: 6   EETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSL 65
           ++ T +C++C ++IP  N  +H +HC RN+  C  C +  PK   E H    H  V+C  
Sbjct: 7   DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTCK- 66

Query: 66  CSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRL 125
           C++ +E+ +L  H+   CP R+  C+ C+  L  + L EH++ CG RTELC  C R + +
Sbjct: 67  CNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLV 126

Query: 126 RERYSHENNC 136
           ++  +H   C
Sbjct: 127 KDLKTHPEVC 135

[Close]

BLAST of Csor.00g178000 vs. ExPASy Swiss-Prot
Match: Q6GPH4 (XIAP-associated factor 1 OS=Homo sapiens OX=9606 GN=XAF1 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.0e-23
Identity = 53/149 (35.57%), Postives = 76/149 (51.01%), Query Frame = 0


Query: 10  SICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSLCSET 69
           S+C +C R + S N  LH  +C R L  C  C + VPK   EEH    H  V C++C ++
Sbjct: 6   SVCRNCKRHVVSANFTLHEAYCLRFLVLCPECEEPVPKETMEEHCKLEHQQVGCTMCQQS 65

Query: 70  MERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRLRERY 129
           M++  L  HK   C +R V C+FC+  +    L  H+  CG+RTELC  C ++I  R   
Sbjct: 66  MQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHESYCGSRTELCQGCGQFIMHRMLA 125

Query: 130 SHENNCKGVTAADTVAESSRDVGAAPERD 159
            H + C+   A     E      +APER+
Sbjct: 126 QHRDVCRSEQAQLGKGERI----SAPERE 150

[Close]

BLAST of Csor.00g178000 vs. ExPASy Swiss-Prot
Match: Q58D05 (TRAF-type zinc finger domain-containing protein 1 OS=Bos taurus OX=9913 GN=TRAFD1 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.5e-23
Identity = 43/131 (32.82%), Postives = 74/131 (56.49%), Query Frame = 0


Query: 5   SEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCS 64
           +++ T +C++C ++IP  N  +H +HC RN+  C +C +  PK   E H    H  V+C 
Sbjct: 6   NDQDTRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKCDMETHMATEHCQVTCK 65

Query: 65  LCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIR 124
            C++ +E+  L  H+   CP R+  C+ C+  L  + L +H++ CG RTELC  C R + 
Sbjct: 66  -CNKKLEKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHEDYCGARTELCGTCGRNVL 125

Query: 125 LRERYSHENNC 136
           +++  +H   C
Sbjct: 126 VKDLKTHPEVC 135

[Close]

BLAST of Csor.00g178000 vs. ExPASy Swiss-Prot
Match: Q99MM4 (TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Trafd1 PE=1 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 49/150 (32.67%), Postives = 76/150 (50.67%), Query Frame = 0


Query: 6   EETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAPVSCSL 65
           ++   +C++C ++IP  N  +H +HC RN+  C +C +  PK   + H    H  V+C  
Sbjct: 7   DQAARLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHVATEHCQVTCK- 66

Query: 66  CSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCRRYIRL 125
           C++ +E+  L  H    CP R+  C+ C+  L  V L EH++ CG RTELC  C R + +
Sbjct: 67  CNKKLEKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHEDYCGARTELCGSCGRNVLV 126

Query: 126 RERYSHENNCKGVTAADTVAESSRDVGAAP 156
           +E  +H   C        V E  R   A P
Sbjct: 127 KELQTHPAVC------GRVEEEKRSEAAVP 149

[Close]

BLAST of Csor.00g178000 vs. NCBI nr
Match: XP_023534901.1 (XIAP-associated factor 1-like [Cucurbita pepo subsp. pepo] >KAG6591703.1 XIAP-associated factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024586.1 XIAP-associated factor 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 427 bits (1099), Expect = 3.05e-151
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60
           MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180
           RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF
Sbjct: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180

Query: 181 TIAITGIAVLLGSLFFQRKAESNIMH 206
           TIAITGIAVLLGSLFFQRKAESNIMH
Sbjct: 181 TIAITGIAVLLGSLFFQRKAESNIMH 206

[Close]

BLAST of Csor.00g178000 vs. NCBI nr
Match: XP_022936676.1 (XIAP-associated factor 1-like [Cucurbita moschata])

HSP 1 Score: 424 bits (1090), Expect = 7.19e-150
Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60
           MAVASEETTSICNHCGRDIPS NIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180
           RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF
Sbjct: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180

Query: 181 TIAITGIAVLLGSLFFQRKAESNIMH 206
           TIAITGIAVLLGSLFFQRKAESNI+H
Sbjct: 181 TIAITGIAVLLGSLFFQRKAESNIVH 206

[Close]

BLAST of Csor.00g178000 vs. NCBI nr
Match: XP_022975863.1 (XIAP-associated factor 1-like [Cucurbita maxima])

HSP 1 Score: 424 bits (1089), Expect = 1.02e-149
Identity = 204/206 (99.03%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60
           MAVASEETTSICNHCGRDIPS NIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180
           RYIRLRERYSHENNCKGV AADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF
Sbjct: 121 RYIRLRERYSHENNCKGVAAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180

Query: 181 TIAITGIAVLLGSLFFQRKAESNIMH 206
           TIAITGIAVLLGSLFFQRKAESNIMH
Sbjct: 181 TIAITGIAVLLGSLFFQRKAESNIMH 206

[Close]

BLAST of Csor.00g178000 vs. NCBI nr
Match: XP_038897923.1 (XIAP-associated factor 1 [Benincasa hispida] >XP_038897924.1 XIAP-associated factor 1 [Benincasa hispida])

HSP 1 Score: 400 bits (1028), Expect = 2.12e-140
Identity = 192/207 (92.75%), Postives = 198/207 (95.65%), Query Frame = 0


Query: 1   MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60
           MAVASEETTSICNHCGR IPS+NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHAP
Sbjct: 1   MAVASEETTSICNHCGRHIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERD-QVRDRGARRRQPQEFSTRRLI 180
           RYIRLRERYSHENNCKGV AAD +AESSRDVGAAPERD Q RDR ARRRQP EFSTRRLI
Sbjct: 121 RYIRLRERYSHENNCKGVVAADNIAESSRDVGAAPERDHQARDRDARRRQPPEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQRKAESNIMH 206
           FTIAITGIAVLLGSLF QRKAESN++H
Sbjct: 181 FTIAITGIAVLLGSLFLQRKAESNVVH 207

[Close]

BLAST of Csor.00g178000 vs. NCBI nr
Match: XP_008466135.1 (PREDICTED: XIAP-associated factor 1 [Cucumis melo] >XP_008466136.1 PREDICTED: XIAP-associated factor 1 [Cucumis melo] >KAA0038651.1 XIAP-associated factor 1 [Cucumis melo var. makuwa] >TYK31254.1 XIAP-associated factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 397 bits (1021), Expect = 2.48e-139
Identity = 190/207 (91.79%), Postives = 199/207 (96.14%), Query Frame = 0


Query: 1   MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60
           MAVASEETTSICNHCGRDIPS+NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELC LCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCPLCR 120

Query: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERD-QVRDRGARRRQPQEFSTRRLI 180
            YIRLRERY+HENNCKG+  AD +AESSRDVGAAPERD Q RDRGA+RRQPQEFSTRRLI
Sbjct: 121 CYIRLRERYNHENNCKGIVPADNIAESSRDVGAAPERDHQARDRGAQRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQRKAESNIMH 206
           FTIAITGIAVLLGSLFFQRK+ESNI+H
Sbjct: 181 FTIAITGIAVLLGSLFFQRKSESNIVH 207

[Close]

BLAST of Csor.00g178000 vs. ExPASy TrEMBL
Match: A0A6J1F858 (XIAP-associated factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443198 PE=4 SV=1)

HSP 1 Score: 424 bits (1090), Expect = 3.48e-150
Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60
           MAVASEETTSICNHCGRDIPS NIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180
           RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF
Sbjct: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180

Query: 181 TIAITGIAVLLGSLFFQRKAESNIMH 206
           TIAITGIAVLLGSLFFQRKAESNI+H
Sbjct: 181 TIAITGIAVLLGSLFFQRKAESNIVH 206

[Close]

BLAST of Csor.00g178000 vs. ExPASy TrEMBL
Match: A0A6J1IKG6 (XIAP-associated factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476436 PE=4 SV=1)

HSP 1 Score: 424 bits (1089), Expect = 4.95e-150
Identity = 204/206 (99.03%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60
           MAVASEETTSICNHCGRDIPS NIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSANIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120

Query: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180
           RYIRLRERYSHENNCKGV AADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF
Sbjct: 121 RYIRLRERYSHENNCKGVAAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180

Query: 181 TIAITGIAVLLGSLFFQRKAESNIMH 206
           TIAITGIAVLLGSLFFQRKAESNIMH
Sbjct: 181 TIAITGIAVLLGSLFFQRKAESNIMH 206

[Close]

BLAST of Csor.00g178000 vs. ExPASy TrEMBL
Match: A0A1S3CRX9 (XIAP-associated factor 1 OS=Cucumis melo OX=3656 GN=LOC103503642 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 1.20e-139
Identity = 190/207 (91.79%), Postives = 199/207 (96.14%), Query Frame = 0


Query: 1   MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60
           MAVASEETTSICNHCGRDIPS+NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELC LCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCPLCR 120

Query: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERD-QVRDRGARRRQPQEFSTRRLI 180
            YIRLRERY+HENNCKG+  AD +AESSRDVGAAPERD Q RDRGA+RRQPQEFSTRRLI
Sbjct: 121 CYIRLRERYNHENNCKGIVPADNIAESSRDVGAAPERDHQARDRGAQRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQRKAESNIMH 206
           FTIAITGIAVLLGSLFFQRK+ESNI+H
Sbjct: 181 FTIAITGIAVLLGSLFFQRKSESNIVH 207

[Close]

BLAST of Csor.00g178000 vs. ExPASy TrEMBL
Match: A0A5D3E5M7 (XIAP-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005430 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 1.20e-139
Identity = 190/207 (91.79%), Postives = 199/207 (96.14%), Query Frame = 0


Query: 1   MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60
           MAVASEETTSICNHCGRDIPS+NIDLHSVHC RNLEKCKICGDMVPKRHAEEH+LNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSSNIDLHSVHCVRNLEKCKICGDMVPKRHAEEHFLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELC LCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCPLCR 120

Query: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERD-QVRDRGARRRQPQEFSTRRLI 180
            YIRLRERY+HENNCKG+  AD +AESSRDVGAAPERD Q RDRGA+RRQPQEFSTRRLI
Sbjct: 121 CYIRLRERYNHENNCKGIVPADNIAESSRDVGAAPERDHQARDRGAQRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQRKAESNIMH 206
           FTIAITGIAVLLGSLFFQRK+ESNI+H
Sbjct: 181 FTIAITGIAVLLGSLFFQRKSESNIVH 207

[Close]

BLAST of Csor.00g178000 vs. ExPASy TrEMBL
Match: A0A0A0LHP4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G892780 PE=4 SV=1)

HSP 1 Score: 394 bits (1013), Expect = 1.99e-138
Identity = 190/207 (91.79%), Postives = 197/207 (95.17%), Query Frame = 0


Query: 1   MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60
           MAVASEETTSICNHCGRDIPS+NIDLHSVHCARNLEKCKICGDMVPKRHAEEH+LNTHAP
Sbjct: 1   MAVASEETTSICNHCGRDIPSSNIDLHSVHCARNLEKCKICGDMVPKRHAEEHFLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120
           VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPA+DLAEHQEVCGNRTELC LCR
Sbjct: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCPLCR 120

Query: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERD-QVRDRGARRRQPQEFSTRRLI 180
            YIRLRERY+HENNCKG+  AD +AESSRDVGAAPERD Q RDRGARRRQPQEFSTRRLI
Sbjct: 121 CYIRLRERYNHENNCKGIIPADNIAESSRDVGAAPERDHQARDRGARRRQPQEFSTRRLI 180

Query: 181 FTIAITGIAVLLGSLFFQRKAESNIMH 206
           FTIAITGIAVLLGSLFF RK ESN +H
Sbjct: 181 FTIAITGIAVLLGSLFFPRKTESNGVH 207

[Close]

BLAST of Csor.00g178000 vs. TAIR 10
Match: AT1G09920.1 (TRAF-type zinc finger-related )

HSP 1 Score: 291.2 bits (744), Expect = 6.5e-79
Identity = 139/201 (69.15%), Postives = 155/201 (77.11%), Query Frame = 0


Query: 1   MAVASEETTSICNHCGRDIPSTNIDLHSVHCARNLEKCKICGDMVPKRHAEEHYLNTHAP 60
           M  A+ E T +CNHC RDIPS NIDLH VHCARNLEKCKICGDMVPK+HAEEHYLNTHAP
Sbjct: 1   METATGEITIVCNHCDRDIPSLNIDLHRVHCARNLEKCKICGDMVPKKHAEEHYLNTHAP 60

Query: 61  VSCSLCSETMERDILAIHKGENCPQRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCHLCR 120
           ++CS+C ET+ER+I   HKGE CP+RIVTCEFCEFPLPAVDLAEHQEVCGNRTELC+ C 
Sbjct: 61  IACSMCKETIEREIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVCGNRTELCYQCN 120

Query: 121 RYIRLRERYSHENNCKGVTAADTVAESSRDVGAAPERDQVRDRGARRRQPQEFSTRRLIF 180
            Y+RLRERY+HE  C G        ESSR +  A E D     G RRR     S +RL F
Sbjct: 121 SYVRLRERYNHETKCPG------TVESSRRIPRAAEGD---GNGRRRRDGNGVSNKRLFF 180

Query: 181 TIAITGIAVLLGSLFFQRKAE 202
           TIAITGIAV++GSLFFQRK E
Sbjct: 181 TIAITGIAVIIGSLFFQRKPE 192

[Close]

BLAST of Csor.00g178000 vs. TAIR 10
Match: AT4G15420.1 (Ubiquitin fusion degradation UFD1 family protein )

HSP 1 Score: 82.4 bits (202), Expect = 4.6e-16
Identity = 46/160 (28.75%), Postives = 74/160 (46.25%), Query Frame = 0


Query: 4   ASEETTSICNHCGRDIPSTNIDLHSVHC--------------------ARNLEKCKICGD 63
           +S+  T  C +C   IPS +I LH V+C                    A+N   C+ CG 
Sbjct: 395 SSDVDTVECRNCKHSIPSRSIALHEVYCSRHNVVCNHHGCGIVLRVEEAKNHLHCEKCGK 454

Query: 64  MVPKRHAEEHYLNTHAPVSCSLCSETMERDILAIHKGENCPQRIVTCEFC----EFPLPA 123
            +     E+H    H P++C  C   +E++ +  H+G++CP R++ C FC    E    A
Sbjct: 455 ALQPTEMEKHLKVFHEPLTCG-CGIVLEKEQMVQHQGKDCPLRLIACRFCGDMVEAGNSA 514

Query: 124 VD-------LAEHQEVCGNRTELCHLCRRYIRLRERYSHE 133
            D       ++EH+  CG+RT  C  C R + L++   H+
Sbjct: 515 ADTRDRMRGMSEHESTCGSRTAPCDSCGRSVMLKDMDIHQ 553

The following BLAST results are available for this feature:

BLAST of Csor.00g178000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4R970	1.0e-23	34.62	TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis OX=9541...	[more]
O14545	3.8e-23	33.85	TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens OX=9606 GN=TRA...	[more]
Q6GPH4	5.0e-23	35.57	XIAP-associated factor 1 OS=Homo sapiens OX=9606 GN=XAF1 PE=1 SV=1	[more]
Q58D05	6.5e-23	32.82	TRAF-type zinc finger domain-containing protein 1 OS=Bos taurus OX=9913 GN=TRAFD...	[more]
Q99MM4	1.1e-22	32.67	TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus OX=10116 ...	[more]

BLAST of Csor.00g178000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534901.1	3.05e-151	100.00	XIAP-associated factor 1-like [Cucurbita pepo subsp. pepo] >KAG6591703.1 XIAP-as...	[more]
XP_022936676.1	7.19e-150	99.03	XIAP-associated factor 1-like [Cucurbita moschata]	[more]
XP_022975863.1	1.02e-149	99.03	XIAP-associated factor 1-like [Cucurbita maxima]	[more]
XP_038897923.1	2.12e-140	92.75	XIAP-associated factor 1 [Benincasa hispida] >XP_038897924.1 XIAP-associated fac...	[more]
XP_008466135.1	2.48e-139	91.79	PREDICTED: XIAP-associated factor 1 [Cucumis melo] >XP_008466136.1 PREDICTED: XI...	[more]

BLAST of Csor.00g178000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F858	3.48e-150	99.03	XIAP-associated factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443198 PE=4...	[more]
A0A6J1IKG6	4.95e-150	99.03	XIAP-associated factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476436 PE=4 S...	[more]
A0A1S3CRX9	1.20e-139	91.79	XIAP-associated factor 1 OS=Cucumis melo OX=3656 GN=LOC103503642 PE=4 SV=1	[more]
A0A5D3E5M7	1.20e-139	91.79	XIAP-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0LHP4	1.99e-138	91.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G892780 PE=4 SV=1	[more]

BLAST of Csor.00g178000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09920.1	6.5e-79	69.15	TRAF-type zinc finger-related	[more]
AT4G15420.1	4.6e-16	28.75	Ubiquitin fusion degradation UFD1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 4..58 e-value: 1.4E-5 score: 26.9
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 59..112 e-value: 1.5E-9 score: 40.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..169
None	No IPR available	PANTHER	PTHR16295:SF25	XIAP-ASSOCIATED FACTOR 1-LIKE	coord: 1..203
None	No IPR available	PANTHER	PTHR16295	TRAF-TYPE ZINC FINGER PROTEIN-RELATED	coord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g178000.m01	Csor.00g178000.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding