Csor.00g177740 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g177740
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Homeobox-leucine zipper protein family
Location	Csor_Chr09: 2718032 .. 2719264 (-)
RNA-Seq Expression	Csor.00g177740
Synteny	Csor.00g177740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATCGCAGCTGAATTAGAGCTGGAGCCAAAACAAGTGACAATTTGGTTTCAGAATCGCAGAGCCCGTTGGAAAGCAAAGAAATTAGAGAGAGATTATGGAGTTCTTAAAGTGGATTACGATGCTCTTAAGCTGGATTATGATGTTCTTGAGAAAGAGAATGCTTCTCTTGCTGCAAATGTATCGAAAATCTGTTAAGAATAACGACTCTCTACAATGGTATGATATTGTCTACTTTGAGTATAAACTCTCTTGCCTATGACTATGCTTTGGGCTTCTCAACAGACCTCGTACCCATGATCAACCTCTAAATTAGCCAATGTGGGACTCACTCCCAACAATCCTCAACAATCCTCTCCTCGAACAAAGTACACCATAGAGCCTTTCTTGAGTCTTAATGTAGCCCTCAAACTGCCTCCCTTTAATCGAGGCTCGACTCCTTTCTTTGGAGTCCTCGAACAAAGTACATATTTTGTTCGACATTTGAGTCACTTTTGACTACATCTTCGAAGCTCACACCTGACATCTGCGAATTCTATTGACATGGTCAAGTTAAGGGCATGTCTATTTTAAATATAACTTACTTAAAACATATATTTAATGACTACATTTCTAAACAGACGTCAAACTACAATAGGTATAGTTGTCGTTGACTCAGCTAGAGAATCAAACCTTTGCTTGACTCGTCTTAGACATAGTTTCATTTGAGTAAACATAATCAATTATAGTTTGGCCTCCTTCGTATAATCTTTTGTTGGACTTGGGTTTGGGTTTTAGTTTTTATTTGATTTTCTTAATTTTGAATTATATCATTTCGTTATGTCCTAATACATTATTTCTTGTGTACTTGATTTTAGTTCAAAGTTTGGGTTTCAGTTTTTATTTGATTTTCTCAATTTTGAATTATATCATTTCGTTATGTCCTAATACATTATTTCTTGTGTACTTGATTTTAGTTCAAAAGGCTTTCACTTCGTGCTTAATAAGTTTGGCTTAATGTTTTGAACAAAAGTTAGGTTAAGACACTTTTCGTGAGTAGAAAGTTGTAGGTTCGACTCTTATTTGGTGCAACTTTATTTATTTTTTTAGCAAGGTTTTTAACATTAGTTCATATGTCTTAGGTTCGACCTCTACCTAGGACACCTTTATATCTTGGTGTAGGTGCATCTCTTGACCATTCTCTTGACCATTGGTGCTTGTAGCTTAGTAGATAGAGTGTCTATTTCATGA

mRNA sequence

ATGAAGATCGCAGCTGAATTAGAGCTGGAGCCAAAACAAGTGACAATTTGGTTTCAGAATCGCAGAGCCCGTTGGAAAGCAAAGAAATTAGAGAGAGATTATGGAGTTCTTAAAGTGGATTACGATGCTCTTAAGCTGGATTATGATGTTCTTGAGAAAGAGAATGCTTCTCTTGCTGCAAATGTGCATCTCTTGACCATTCTCTTGACCATTGGTGCTTGTAGCTTAGTAGATAGAGTGTCTATTTCATGA

Coding sequence (CDS)

ATGAAGATCGCAGCTGAATTAGAGCTGGAGCCAAAACAAGTGACAATTTGGTTTCAGAATCGCAGAGCCCGTTGGAAAGCAAAGAAATTAGAGAGAGATTATGGAGTTCTTAAAGTGGATTACGATGCTCTTAAGCTGGATTATGATGTTCTTGAGAAAGAGAATGCTTCTCTTGCTGCAAATGTGCATCTCTTGACCATTCTCTTGACCATTGGTGCTTGTAGCTTAGTAGATAGAGTGTCTATTTCATGA

Protein sequence

MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAANVHLLTILLTIGACSLVDRVSIS

Homology

[Close]

BLAST of Csor.00g177740 vs. ExPASy Swiss-Prot
Match: P46667 (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-15
Identity = 40/71 (56.34%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 1   MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
           +K+A EL L+P+QV IWFQNRRARWK K+LERDYGVLK ++DALK + D L+++N SL  
Sbjct: 100 VKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLG 159

Query: 61  NVHLLTILLTI 72
            +  L   L +
Sbjct: 160 QIKELKAKLNV 170

[Close]

BLAST of Csor.00g177740 vs. ExPASy Swiss-Prot
Match: P46668 (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.0e-15
Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 0


Query: 1   MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
           +K+A EL L+P+QV +WFQNRRARWK K+LE+DYGVLK  YD+L+ ++D L ++N SL  
Sbjct: 90  VKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQ 149

Query: 61  NVHLLTILLTIG 73
            +  L   L  G
Sbjct: 150 EISKLKTKLNGG 161

[Close]

BLAST of Csor.00g177740 vs. ExPASy Swiss-Prot
Match: Q940J1 (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-16 PE=2 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 5.8e-15
Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 2   KIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAAN 61
           K+A EL L+P+QV +WFQNRRARWK K+LE+DYGVLK  YD+L+ ++D L ++N SL   
Sbjct: 88  KLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQE 147

Query: 62  V 63
           +
Sbjct: 148 I 148

[Close]

BLAST of Csor.00g177740 vs. ExPASy Swiss-Prot
Match: Q9XH37 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.8e-14
Identity = 32/61 (52.46%), Postives = 47/61 (77.05%), Query Frame = 0


Query: 2   KIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAAN 61
           ++A +L L+P+QV +WFQNRRARWK K+LERDY  L+  YD+L+LD+D L ++  +L A 
Sbjct: 80  RLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAE 139

Query: 62  V 63
           +
Sbjct: 140 I 140

[Close]

BLAST of Csor.00g177740 vs. ExPASy Swiss-Prot
Match: Q6K498 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.8e-14
Identity = 32/61 (52.46%), Postives = 47/61 (77.05%), Query Frame = 0


Query: 2   KIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAAN 61
           ++A +L L+P+QV +WFQNRRARWK K+LERDY  L+  YD+L+LD+D L ++  +L A 
Sbjct: 80  RLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAE 139

Query: 62  V 63
           +
Sbjct: 140 I 140

[Close]

BLAST of Csor.00g177740 vs. NCBI nr
Match: KAG6591677.1 (Homeobox-leucine zipper protein ATHB-5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 160 bits (404), Expect = 3.11e-49
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
          MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA
Sbjct: 1  MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60

Query: 61 NVHLLTILLTIGACSLVDRVSIS 83
          NVHLLTILLTIGACSLVDRVSIS
Sbjct: 61 NVHLLTILLTIGACSLVDRVSIS 83

[Close]

BLAST of Csor.00g177740 vs. NCBI nr
Match: KAG7024557.1 (Homeobox-leucine zipper protein ATHB-6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 122 bits (306), Expect = 3.61e-34
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
          MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYG LKVDYDALKLDYDVLEKENASLAA
Sbjct: 27 MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVDYDALKLDYDVLEKENASLAA 86

Query: 61 NV 62
          NV
Sbjct: 87 NV 88

[Close]

BLAST of Csor.00g177740 vs. NCBI nr
Match: KAA0038691.1 (homeobox-leucine zipper protein ATHB-6-like [Cucumis melo var. makuwa])

HSP 1 Score: 112 bits (279), Expect = 1.47e-28
Identity = 54/62 (87.10%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 1   MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
           MKIAAELELEP+QVTIWFQNRRARWK K+LE+DYGVLK++YDALKLDYDVLEKENASLA+
Sbjct: 90  MKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLNYDALKLDYDVLEKENASLAS 149

Query: 61  NV 62
            V
Sbjct: 150 KV 151

[Close]

BLAST of Csor.00g177740 vs. NCBI nr
Match: XP_008466655.1 (PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cucumis melo] >TYK31302.1 homeobox-leucine zipper protein ATHB-6-like [Cucumis melo var. makuwa])

HSP 1 Score: 112 bits (279), Expect = 1.51e-28
Identity = 54/62 (87.10%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 1   MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
           MKIAAELELEP+QVTIWFQNRRARWK K+LE+DYGVLK++YDALKLDYDVLEKENASLA+
Sbjct: 90  MKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLNYDALKLDYDVLEKENASLAS 149

Query: 61  NV 62
            V
Sbjct: 150 KV 151

[Close]

BLAST of Csor.00g177740 vs. NCBI nr
Match: XP_022982007.1 (homeobox-leucine zipper protein ATHB-5-like [Cucurbita maxima])

HSP 1 Score: 111 bits (278), Expect = 3.36e-28
Identity = 54/63 (85.71%), Postives = 58/63 (92.06%), Query Frame = 0


Query: 1   MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
           MKIA ELELEP+QVTIWFQNRRARWK K+LERDYGVLK +YDALKLDYDVLEKENASLA+
Sbjct: 90  MKIATELELEPRQVTIWFQNRRARWKTKQLERDYGVLKANYDALKLDYDVLEKENASLAS 149

Query: 61  NVH 63
            V 
Sbjct: 150 KVR 152

[Close]

BLAST of Csor.00g177740 vs. ExPASy TrEMBL
Match: A0A5A7TAR1 (Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G002330 PE=4 SV=1)

HSP 1 Score: 112 bits (279), Expect = 7.14e-29
Identity = 54/62 (87.10%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 1   MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
           MKIAAELELEP+QVTIWFQNRRARWK K+LE+DYGVLK++YDALKLDYDVLEKENASLA+
Sbjct: 90  MKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLNYDALKLDYDVLEKENASLAS 149

Query: 61  NV 62
            V
Sbjct: 150 KV 151

[Close]

BLAST of Csor.00g177740 vs. ExPASy TrEMBL
Match: A0A5D3E5X1 (Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006000 PE=4 SV=1)

HSP 1 Score: 112 bits (279), Expect = 7.31e-29
Identity = 54/62 (87.10%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 1   MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
           MKIAAELELEP+QVTIWFQNRRARWK K+LE+DYGVLK++YDALKLDYDVLEKENASLA+
Sbjct: 90  MKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLNYDALKLDYDVLEKENASLAS 149

Query: 61  NV 62
            V
Sbjct: 150 KV 151

[Close]

BLAST of Csor.00g177740 vs. ExPASy TrEMBL
Match: A0A1S3CRT3 (homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo OX=3656 GN=LOC103504010 PE=4 SV=1)

HSP 1 Score: 112 bits (279), Expect = 7.31e-29
Identity = 54/62 (87.10%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 1   MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
           MKIAAELELEP+QVTIWFQNRRARWK K+LE+DYGVLK++YDALKLDYDVLEKENASLA+
Sbjct: 90  MKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLNYDALKLDYDVLEKENASLAS 149

Query: 61  NV 62
            V
Sbjct: 150 KV 151

[Close]

BLAST of Csor.00g177740 vs. ExPASy TrEMBL
Match: A0A6J1IVI4 (homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita maxima OX=3661 GN=LOC111480988 PE=4 SV=1)

HSP 1 Score: 111 bits (278), Expect = 1.63e-28
Identity = 54/63 (85.71%), Postives = 58/63 (92.06%), Query Frame = 0


Query: 1   MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
           MKIA ELELEP+QVTIWFQNRRARWK K+LERDYGVLK +YDALKLDYDVLEKENASLA+
Sbjct: 90  MKIATELELEPRQVTIWFQNRRARWKTKQLERDYGVLKANYDALKLDYDVLEKENASLAS 149

Query: 61  NVH 63
            V 
Sbjct: 150 KVR 152

[Close]

BLAST of Csor.00g177740 vs. ExPASy TrEMBL
Match: A0A6J1FIN2 (homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita moschata OX=3662 GN=LOC111446073 PE=4 SV=1)

HSP 1 Score: 111 bits (278), Expect = 1.63e-28
Identity = 54/63 (85.71%), Postives = 58/63 (92.06%), Query Frame = 0


Query: 1   MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
           MKIA ELELEP+QVTIWFQNRRARWK K+LERDYGVLK +YDALKLDYDVLEKENASLA+
Sbjct: 90  MKIATELELEPRQVTIWFQNRRARWKTKQLERDYGVLKANYDALKLDYDVLEKENASLAS 149

Query: 61  NVH 63
            V 
Sbjct: 150 KVR 152

[Close]

BLAST of Csor.00g177740 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 83.6 bits (205), Expect = 8.3e-17
Identity = 40/71 (56.34%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 1   MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
           +K+A EL L+P+QV IWFQNRRARWK K+LERDYGVLK ++DALK + D L+++N SL  
Sbjct: 100 VKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLG 159

Query: 61  NVHLLTILLTI 72
            +  L   L +
Sbjct: 160 QIKELKAKLNV 170

[Close]

BLAST of Csor.00g177740 vs. TAIR 10
Match: AT5G65310.2 (homeobox protein 5 )

HSP 1 Score: 83.6 bits (205), Expect = 8.3e-17
Identity = 40/71 (56.34%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 1   MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
           +K+A EL L+P+QV IWFQNRRARWK K+LERDYGVLK ++DALK + D L+++N SL  
Sbjct: 82  VKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLG 141

Query: 61  NVHLLTILLTI 72
            +  L   L +
Sbjct: 142 QIKELKAKLNV 152

[Close]

BLAST of Csor.00g177740 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 82.8 bits (203), Expect = 1.4e-16
Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 0


Query: 1   MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
           +K+A EL L+P+QV +WFQNRRARWK K+LE+DYGVLK  YD+L+ ++D L ++N SL  
Sbjct: 90  VKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQ 149

Query: 61  NVHLLTILLTIG 73
            +  L   L  G
Sbjct: 150 EISKLKTKLNGG 161

[Close]

BLAST of Csor.00g177740 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 )

HSP 1 Score: 81.3 bits (199), Expect = 4.1e-16
Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 2   KIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAAN 61
           K+A EL L+P+QV +WFQNRRARWK K+LE+DYGVLK  YD+L+ ++D L ++N SL   
Sbjct: 88  KLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQE 147

Query: 62  V 63
           +
Sbjct: 148 I 148

[Close]

BLAST of Csor.00g177740 vs. TAIR 10
Match: AT1G69780.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 73.9 bits (180), Expect = 6.6e-14
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 1   MKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGVLKVDYDALKLDYDVLEKENASLAA 60
           M++A  L L+P+Q+ IWFQNRRARWK K+LE+DY  LK  +D LK + D+L+  N  L A
Sbjct: 113 MQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQA 172

Query: 61  NV 63
            +
Sbjct: 173 EI 174

The following BLAST results are available for this feature:

BLAST of Csor.00g177740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46667	1.2e-15	56.34	Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5...	[more]
P46668	2.0e-15	52.78	Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6...	[more]
Q940J1	5.8e-15	57.38	Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9XH37	3.8e-14	52.46	Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=H...	[more]
Q6K498	3.8e-14	52.46	Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of Csor.00g177740 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591677.1	3.11e-49	100.00	Homeobox-leucine zipper protein ATHB-5, partial [Cucurbita argyrosperma subsp. s...	[more]
KAG7024557.1	3.61e-34	98.39	Homeobox-leucine zipper protein ATHB-6, partial [Cucurbita argyrosperma subsp. a...	[more]
KAA0038691.1	1.47e-28	87.10	homeobox-leucine zipper protein ATHB-6-like [Cucumis melo var. makuwa]	[more]
XP_008466655.1	1.51e-28	87.10	PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cucumis melo] >TYK31302....	[more]
XP_022982007.1	3.36e-28	85.71	homeobox-leucine zipper protein ATHB-5-like [Cucurbita maxima]	[more]

BLAST of Csor.00g177740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TAR1	7.14e-29	87.10	Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3E5X1	7.31e-29	87.10	Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CRT3	7.31e-29	87.10	homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo OX=3656 GN=LOC103504...	[more]
A0A6J1IVI4	1.63e-28	85.71	homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FIN2	1.63e-28	85.71	homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Csor.00g177740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65310.1	8.3e-17	56.34	homeobox protein 5	[more]
AT5G65310.2	8.3e-17	56.34	homeobox protein 5	[more]
AT2G22430.1	1.4e-16	52.78	homeobox protein 6	[more]
AT4G40060.1	4.1e-16	57.38	homeobox protein 16	[more]
AT1G69780.1	6.6e-14	51.61	Homeobox-leucine zipper protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 41..61
None	No IPR available	GENE3D	1.10.10.60		coord: 1..35 e-value: 6.0E-11 score: 43.8
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 1..65
None	No IPR available	PANTHER	PTHR24326:SF547	HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX4	coord: 1..65
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 28..68 e-value: 1.3E-14 score: 54.1
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 2..26 e-value: 1.9E-10 score: 40.4
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 1..28 score: 12.422218
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 2..29 e-value: 9.25275E-10 score: 47.6233
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 3..26
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 2..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g177740.m01	Csor.00g177740.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding