Csor.00g177220 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g177220
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	Csor_Chr12: 11939312 .. 11939905 (-)
RNA-Seq Expression	Csor.00g177220
Synteny	Csor.00g177220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGTCCTCCACAGCTATCTTCACGACCCGCCCGCCCGAACATATTGCGCTACGTCATATTGGTCCTAGTAGCACTAATTGTATTGGTTGGTCTCGTCGTGCTCATCATTTGGTTGACTGTTAGGCCGAAACGATTAAGCTACACGGTGGAAAGCGCTGCGGTCCATAACTTTGACATGAGCACTACTCAGCTTAATGCTTCCTTCAATTTCGGAGTGAAAGCTTACAATCCCAATAGACATGTTTCGGTTTATTATGATCATGTCACTGTTACGGTTGGGTTCGGCGATCAAGATTTGGCGTTTGGTGTGATTAAGCCCTTCTACCAACCTCACAAAGATGTGACATGGTTGAACATGGACCTTAATGCTAAAAACTTTTTGTTGCACGACTCCGTGTCGAAGGATCTAGCGCTCGAAAAGGCAGCGGGAGAGATGGATTTGGATCTTTGGATCAAGGCGCGAATTAGGTTTAAGGTTGGAGTTTGGAAGTCGGGGCATCGGACGCTTCGAATTCGGTGTTCGCCCGTGATTGTCTACTTGTCTAAAGACAAGGAATTCAAGAGGACTGCTTGCTTTACTGAAGTCTAA

mRNA sequence

ATGGCGGGTCCTCCACAGCTATCTTCACGACCCGCCCGCCCGAACATATTGCGCTACGTCATATTGGTCCTAGTAGCACTAATTGTATTGGTTGGTCTCGTCGTGCTCATCATTTGGTTGACTGTTAGGCCGAAACGATTAAGCTACACGGTGGAAAGCGCTGCGGTCCATAACTTTGACATGAGCACTACTCAGCTTAATGCTTCCTTCAATTTCGGAGTGAAAGCTTACAATCCCAATAGACATGTTTCGGTTTATTATGATCATGTCACTGTTACGGTTGGGTTCGGCGATCAAGATTTGGCGTTTGGTGTGATTAAGCCCTTCTACCAACCTCACAAAGATGTGACATGGTTGAACATGGACCTTAATGCTAAAAACTTTTTGTTGCACGACTCCGTGTCGAAGGATCTAGCGCTCGAAAAGGCAGCGGGAGAGATGGATTTGGATCTTTGGATCAAGGCGCGAATTAGGTTTAAGGTTGGAGTTTGGAAGTCGGGGCATCGGACGCTTCGAATTCGGTGTTCGCCCGTGATTGTCTACTTGTCTAAAGACAAGGAATTCAAGAGGACTGCTTGCTTTACTGAAGTCTAA

Coding sequence (CDS)

ATGGCGGGTCCTCCACAGCTATCTTCACGACCCGCCCGCCCGAACATATTGCGCTACGTCATATTGGTCCTAGTAGCACTAATTGTATTGGTTGGTCTCGTCGTGCTCATCATTTGGTTGACTGTTAGGCCGAAACGATTAAGCTACACGGTGGAAAGCGCTGCGGTCCATAACTTTGACATGAGCACTACTCAGCTTAATGCTTCCTTCAATTTCGGAGTGAAAGCTTACAATCCCAATAGACATGTTTCGGTTTATTATGATCATGTCACTGTTACGGTTGGGTTCGGCGATCAAGATTTGGCGTTTGGTGTGATTAAGCCCTTCTACCAACCTCACAAAGATGTGACATGGTTGAACATGGACCTTAATGCTAAAAACTTTTTGTTGCACGACTCCGTGTCGAAGGATCTAGCGCTCGAAAAGGCAGCGGGAGAGATGGATTTGGATCTTTGGATCAAGGCGCGAATTAGGTTTAAGGTTGGAGTTTGGAAGTCGGGGCATCGGACGCTTCGAATTCGGTGTTCGCCCGTGATTGTCTACTTGTCTAAAGACAAGGAATTCAAGAGGACTGCTTGCTTTACTGAAGTCTAA

Protein sequence

MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLSKDKEFKRTACFTEV

Homology

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BLAST of Csor.00g177220 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.2e-27
Identity = 69/189 (36.51%), Postives = 115/189 (60.85%), Query Frame = 0


Query: 13  RPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMSTT--QLNASF 72
           R N +  +I+ LV L +LVGL +LI +LT+RPKRL YTVE+A+V  F +      +NA F
Sbjct: 33  RMNPVLCIIVALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKF 92

Query: 73  NFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLL 132
           ++ +K+YNP +HVSV Y  + ++    +Q +A   I PF Q  K+ T +   L + N  L
Sbjct: 93  SYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVAL 152

Query: 133 HDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLSKDK--EF 192
               ++DL  EK+ G ++++++I AR+ +K  +++S  RTL+  C+PV++ ++      F
Sbjct: 153 SKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGF 212

Query: 193 KRTACFTEV 198
           +R  C T +
Sbjct: 213 QRVLCKTRL 221

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BLAST of Csor.00g177220 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.8e-15
Identity = 37/153 (24.18%), Postives = 83/153 (54.25%), Query Frame = 0


Query: 33  LVVLIIWLTVRPKRLSYTVESAAVHNFDMSTTQ---LNASFNFGVKAYNPNRHVSVYYDH 92
           L++ ++WL + P+R  +++  A +++ +++T+    LN+S    + + NPN+ V +YYD 
Sbjct: 40  LIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDK 99

Query: 93  VTVTVGF-GDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLLHDSVSKDLALEKAAGEMD 152
           + V   + G Q  +   + PFYQ H+++  L   L      +  S    ++ E++ G++ 
Sbjct: 100 LLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKII 159

Query: 153 LDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVY 182
           + + +  ++R+K+G W SG     + C  ++ +
Sbjct: 160 IGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAF 192

[Close]

BLAST of Csor.00g177220 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 61/188 (32.45%), Postives = 93/188 (49.47%), Query Frame = 0


Query: 16  ILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMSTT---QLNASFNF 75
           IL  +  +L+ + VL+G+  LIIWL  RP  + + V  A +  F +  T   + N   NF
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNF 103

Query: 76  GVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGV---IKPFYQPHKDVTWLNMDLNAKNFL 135
            ++  NPNR + VYYD + V   +GDQ   FG+   I  FYQ HK+ T +   L  +  +
Sbjct: 104 TIR--NPNRRIGVYYDEIEVRGYYGDQ--RFGMSNNISKFYQGHKNTTVVGTKLVGQQLV 163

Query: 136 LHD-SVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLSKDKE- 194
           L D    KDL  +  +    +D  ++ +IRFK G+ KS     +I+C   +   S     
Sbjct: 164 LLDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSG 223

[Close]

BLAST of Csor.00g177220 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.8e-14
Identity = 47/171 (27.49%), Postives = 91/171 (53.22%), Query Frame = 0


Query: 16  ILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMSTTQLNASFNFG-- 75
           +L   + V+++LIV++G+  LI WL VRP+ + + V  A++  FD ++      +N    
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 76  VKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLLHDS 135
           V   NPN+ + +YYD +     +  +  +   + PFYQ HK+ T L      +N ++ ++
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNA 156

Query: 136 -VSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLS 184
             S+ L  E+ +G  ++++  + R+RFK+G  K      ++ C  + + LS
Sbjct: 157 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLS 207

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BLAST of Csor.00g177220 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.0e-14
Identity = 50/173 (28.90%), Postives = 89/173 (51.45%), Query Frame = 0


Query: 27  LIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDM-STTQLNASFNFGVKAYNPNRHVSV 86
           LIVL G+   +++L  RP+   Y++E  +V   ++ ST+ ++ SFN  V++ N N  + V
Sbjct: 85  LIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGV 144

Query: 87  YYD-HVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLLHDSVSKDLALEKAA 146
           YY+   +V V + D D++ GV+  FYQP K+VT + + L+     L   + K++  E + 
Sbjct: 145 YYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSK 204

Query: 147 GEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLSKDKEFKRTACFTEV 198
             +   L IKA ++ K G  K+    + + C   +  L+         C  +V
Sbjct: 205 KTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHDV 257

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BLAST of Csor.00g177220 vs. NCBI nr
Match: XP_022937555.1 (uncharacterized protein At1g08160 [Cucurbita moschata] >XP_023537506.1 uncharacterized protein At1g08160 [Cucurbita pepo subsp. pepo] >KAG6586016.1 hypothetical protein SDJN03_18749, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 394 bits (1011), Expect = 4.02e-138
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD
Sbjct: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEV 197
           YLSKDKEFKRTACFTEV
Sbjct: 181 YLSKDKEFKRTACFTEV 197

[Close]

BLAST of Csor.00g177220 vs. NCBI nr
Match: KAG7020792.1 (hypothetical protein SDJN02_17480, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 390 bits (1002), Expect = 9.47e-137
Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQLSSRPAR NILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD
Sbjct: 1   MAGPPQLSSRPARSNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEV 197
           YLSKDKEFKRTACFTE+
Sbjct: 181 YLSKDKEFKRTACFTEI 197

[Close]

BLAST of Csor.00g177220 vs. NCBI nr
Match: XP_022969533.1 (uncharacterized protein At1g08160 [Cucurbita maxima])

HSP 1 Score: 386 bits (992), Expect = 3.17e-135
Identity = 193/197 (97.97%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQLS RPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRL YTVESAAVHNFD
Sbjct: 1   MAGPPQLSPRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLRYTVESAAVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIR+KVGVWK GHRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRYKVGVWKLGHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEV 197
           YLSKDKEFKRTACFTEV
Sbjct: 181 YLSKDKEFKRTACFTEV 197

[Close]

BLAST of Csor.00g177220 vs. NCBI nr
Match: XP_008464346.1 (PREDICTED: uncharacterized protein At1g08160 [Cucumis melo] >KAA0032608.1 uncharacterized protein E6C27_scaffold43053G00810 [Cucumis melo var. makuwa] >TYK20878.1 uncharacterized protein E5676_scaffold284G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 327 bits (838), Expect = 9.47e-112
Identity = 160/197 (81.22%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQ  SR     ILR+VI+ LVALI+LVGL VLIIWLT+RPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           M+ TQLNASF+FGV+AYNPN+ VSVYYD +T TVGFGDQDLAFGV+ PFYQPHKD  WLN
Sbjct: 61  MTNTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           + LNA+NFLLHDSVSKDLALE++AGEMDLDLWIKARIRFKVGVWKS HRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEV 197
           YLSK K FK+T CFTEV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Csor.00g177220 vs. NCBI nr
Match: XP_011654115.1 (uncharacterized protein At1g08160 [Cucumis sativus])

HSP 1 Score: 322 bits (825), Expect = 9.06e-110
Identity = 158/197 (80.20%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQ  SR     ILR+VI+ LVALI+LVGL VLIIWLTVRPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           M+ TQLNASF+FGV+AYNPN+ VSVYYD +T TVGFGDQDL+FGV+ PFYQPHK+  WLN
Sbjct: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           + LNA+NFLLHDSVSK+LALE++AGEMDLDLWIKARIRFKVGVWKS HRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEV 197
           YLSK K FK+T CFTEV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Csor.00g177220 vs. ExPASy TrEMBL
Match: A0A6J1FH28 (uncharacterized protein At1g08160 OS=Cucurbita moschata OX=3662 GN=LOC111443929 PE=4 SV=1)

HSP 1 Score: 394 bits (1011), Expect = 1.95e-138
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD
Sbjct: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEV 197
           YLSKDKEFKRTACFTEV
Sbjct: 181 YLSKDKEFKRTACFTEV 197

[Close]

BLAST of Csor.00g177220 vs. ExPASy TrEMBL
Match: A0A6J1I194 (uncharacterized protein At1g08160 OS=Cucurbita maxima OX=3661 GN=LOC111468522 PE=4 SV=1)

HSP 1 Score: 386 bits (992), Expect = 1.54e-135
Identity = 193/197 (97.97%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQLS RPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRL YTVESAAVHNFD
Sbjct: 1   MAGPPQLSPRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLRYTVESAAVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN
Sbjct: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIR+KVGVWK GHRTLRIRCSPVIV
Sbjct: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRYKVGVWKLGHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEV 197
           YLSKDKEFKRTACFTEV
Sbjct: 181 YLSKDKEFKRTACFTEV 197

[Close]

BLAST of Csor.00g177220 vs. ExPASy TrEMBL
Match: A0A5D3DBK2 (LEA_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00070 PE=4 SV=1)

HSP 1 Score: 327 bits (838), Expect = 4.58e-112
Identity = 160/197 (81.22%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQ  SR     ILR+VI+ LVALI+LVGL VLIIWLT+RPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           M+ TQLNASF+FGV+AYNPN+ VSVYYD +T TVGFGDQDLAFGV+ PFYQPHKD  WLN
Sbjct: 61  MTNTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           + LNA+NFLLHDSVSKDLALE++AGEMDLDLWIKARIRFKVGVWKS HRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEV 197
           YLSK K FK+T CFTEV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Csor.00g177220 vs. ExPASy TrEMBL
Match: A0A1S3CLP6 (uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103502251 PE=4 SV=1)

HSP 1 Score: 327 bits (838), Expect = 4.58e-112
Identity = 160/197 (81.22%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQ  SR     ILR+VI+ LVALI+LVGL VLIIWLT+RPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQPPSRAGPSRILRFVIIFLVALIILVGLAVLIIWLTIRPKRLSYTVESAEVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           M+ TQLNASF+FGV+AYNPN+ VSVYYD +T TVGFGDQDLAFGV+ PFYQPHKD  WLN
Sbjct: 61  MTNTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLAFGVLSPFYQPHKDEQWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           + LNA+NFLLHDSVSKDLALE++AGEMDLDLWIKARIRFKVGVWKS HRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKDLALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEV 197
           YLSK K FK+T CFTEV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Csor.00g177220 vs. ExPASy TrEMBL
Match: A0A0A0LVK3 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132720 PE=4 SV=1)

HSP 1 Score: 322 bits (825), Expect = 4.38e-110
Identity = 158/197 (80.20%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 1   MAGPPQLSSRPARPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFD 60
           MAGPPQ  SR     ILR+VI+ LVALI+LVGL VLIIWLTVRPKRLSYTVESA VHNFD
Sbjct: 1   MAGPPQPLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFD 60

Query: 61  MSTTQLNASFNFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLN 120
           M+ TQLNASF+FGV+AYNPN+ VSVYYD +T TVGFGDQDL+FGV+ PFYQPHK+  WLN
Sbjct: 61  MTDTQLNASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLN 120

Query: 121 MDLNAKNFLLHDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIV 180
           + LNA+NFLLHDSVSK+LALE++AGEMDLDLWIKARIRFKVGVWKS HRTLRIRCSPVIV
Sbjct: 121 IHLNAQNFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIV 180

Query: 181 YLSKDKEFKRTACFTEV 197
           YLSK K FK+T CFTEV
Sbjct: 181 YLSKSKTFKKTTCFTEV 197

[Close]

BLAST of Csor.00g177220 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 158.7 bits (400), Expect = 4.8e-39
Identity = 75/186 (40.32%), Postives = 126/186 (67.74%), Query Frame = 0


Query: 13  RPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMST-TQLNASFN 72
           RP+++ Y+ LV++ LI +  +  LI WL  +PK+L YTVE+A+V NF+++    ++A+F 
Sbjct: 22  RPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATFQ 81

Query: 73  FGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLLH 132
           F ++++NPN  +SVYY  V + V F DQ LAF  ++PF+QP  +V  ++  L A+N  + 
Sbjct: 82  FTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAVS 141

Query: 133 DSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLSKDKEFKRT 192
            S  KDL  + + G++  ++++KAR+RFKVG+WKS HRT +I+CS V V LS+  + + +
Sbjct: 142 KSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKSQNS 201

Query: 193 ACFTEV 198
           +C  ++
Sbjct: 202 SCDADI 207

[Close]

BLAST of Csor.00g177220 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 121.7 bits (304), Expect = 6.6e-28
Identity = 69/189 (36.51%), Postives = 115/189 (60.85%), Query Frame = 0


Query: 13  RPNILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMSTT--QLNASF 72
           R N +  +I+ LV L +LVGL +LI +LT+RPKRL YTVE+A+V  F +      +NA F
Sbjct: 33  RMNPVLCIIVALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKF 92

Query: 73  NFGVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLL 132
           ++ +K+YNP +HVSV Y  + ++    +Q +A   I PF Q  K+ T +   L + N  L
Sbjct: 93  SYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVAL 152

Query: 133 HDSVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLSKDK--EF 192
               ++DL  EK+ G ++++++I AR+ +K  +++S  RTL+  C+PV++ ++      F
Sbjct: 153 SKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGF 212

Query: 193 KRTACFTEV 198
           +R  C T +
Sbjct: 213 QRVLCKTRL 221

[Close]

BLAST of Csor.00g177220 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 81.6 bits (200), Expect = 7.5e-16
Identity = 61/188 (32.45%), Postives = 93/188 (49.47%), Query Frame = 0


Query: 16  ILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMSTT---QLNASFNF 75
           IL  +  +L+ + VL+G+  LIIWL  RP  + + V  A +  F +  T   + N   NF
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNF 103

Query: 76  GVKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGV---IKPFYQPHKDVTWLNMDLNAKNFL 135
            ++  NPNR + VYYD + V   +GDQ   FG+   I  FYQ HK+ T +   L  +  +
Sbjct: 104 TIR--NPNRRIGVYYDEIEVRGYYGDQ--RFGMSNNISKFYQGHKNTTVVGTKLVGQQLV 163

Query: 136 LHD-SVSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLSKDKE- 194
           L D    KDL  +  +    +D  ++ +IRFK G+ KS     +I+C   +   S     
Sbjct: 164 LLDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSG 223

[Close]

BLAST of Csor.00g177220 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 47/171 (27.49%), Postives = 91/171 (53.22%), Query Frame = 0


Query: 16  ILRYVILVLVALIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDMSTTQLNASFNFG-- 75
           +L   + V+++LIV++G+  LI WL VRP+ + + V  A++  FD ++      +N    
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 76  VKAYNPNRHVSVYYDHVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLLHDS 135
           V   NPN+ + +YYD +     +  +  +   + PFYQ HK+ T L      +N ++ ++
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNA 156

Query: 136 -VSKDLALEKAAGEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLS 184
             S+ L  E+ +G  ++++  + R+RFK+G  K      ++ C  + + LS
Sbjct: 157 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLS 207

[Close]

BLAST of Csor.00g177220 vs. TAIR 10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 78.6 bits (192), Expect = 6.4e-15
Identity = 50/173 (28.90%), Postives = 89/173 (51.45%), Query Frame = 0


Query: 27  LIVLVGLVVLIIWLTVRPKRLSYTVESAAVHNFDM-STTQLNASFNFGVKAYNPNRHVSV 86
           LIVL G+   +++L  RP+   Y++E  +V   ++ ST+ ++ SFN  V++ N N  + V
Sbjct: 85  LIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGV 144

Query: 87  YYD-HVTVTVGFGDQDLAFGVIKPFYQPHKDVTWLNMDLNAKNFLLHDSVSKDLALEKAA 146
           YY+   +V V + D D++ GV+  FYQP K+VT + + L+     L   + K++  E + 
Sbjct: 145 YYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSK 204

Query: 147 GEMDLDLWIKARIRFKVGVWKSGHRTLRIRCSPVIVYLSKDKEFKRTACFTEV 198
             +   L IKA ++ K G  K+    + + C   +  L+         C  +V
Sbjct: 205 KTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHDV 257

The following BLAST results are available for this feature:

BLAST of Csor.00g177220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ13	9.2e-27	36.51	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]
Q9FI03	4.8e-15	24.18	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9FNH6	1.1e-14	32.45	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SJ52	1.8e-14	27.49	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9ZVD2	9.0e-14	28.90	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]

BLAST of Csor.00g177220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937555.1	4.02e-138	100.00	uncharacterized protein At1g08160 [Cucurbita moschata] >XP_023537506.1 uncharact...	[more]
KAG7020792.1	9.47e-137	98.98	hypothetical protein SDJN02_17480, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022969533.1	3.17e-135	97.97	uncharacterized protein At1g08160 [Cucurbita maxima]	[more]
XP_008464346.1	9.47e-112	81.22	PREDICTED: uncharacterized protein At1g08160 [Cucumis melo] >KAA0032608.1 unchar...	[more]
XP_011654115.1	9.06e-110	80.20	uncharacterized protein At1g08160 [Cucumis sativus]	[more]

BLAST of Csor.00g177220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FH28	1.95e-138	100.00	uncharacterized protein At1g08160 OS=Cucurbita moschata OX=3662 GN=LOC111443929 ...	[more]
A0A6J1I194	1.54e-135	97.97	uncharacterized protein At1g08160 OS=Cucurbita maxima OX=3661 GN=LOC111468522 PE...	[more]
A0A5D3DBK2	4.58e-112	81.22	LEA_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CLP6	4.58e-112	81.22	uncharacterized protein At1g08160 OS=Cucumis melo OX=3656 GN=LOC103502251 PE=4 S...	[more]
A0A0A0LVK3	4.38e-110	80.20	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132720 PE=4 ...	[more]

BLAST of Csor.00g177220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22870.1	4.8e-39	40.32	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G08160.1	6.6e-28	36.51	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06320.1	7.5e-16	32.45	NDR1/HIN1-like 3	[more]
AT2G35980.1	1.3e-15	27.49	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G27080.1	6.4e-15	28.90	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 195..197
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 10..196
None	No IPR available	PANTHER	PTHR31852:SF5	GB\|AAF18257.1	coord: 10..196
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 74..175 e-value: 2.7E-13 score: 50.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g177220.m01	Csor.00g177220.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma