Csor.00g176940 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g176940
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ubiquitin
Location	Csor_Chr12: 12326082 .. 12329264 (+)
RNA-Seq Expression	Csor.00g176940
Synteny	Csor.00g176940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGTAGTTCATATCTCTCTCTATCTTTGTCTGAATATAAGCGATTCATACCTTAACCTCGCTACAATGCTTTTATTGTAATTTCTCTGGATTAACTAGTTTACAAGCACGGAAAACTCAAAGAAGGCCTGTCATAAAATTTGTGTTTTCATCTGAAGTATACTTTTTTGGAGCCTGTACTGAATAATTTTCAGTTACTACTATCTTGTTGAATTTACCTTCTAATTACGTACCACTGTTTCCATATATTCTTTATTATCTATGTAATTCTCTGTTTGTTCTAAACTATGTCATAAATTCAAGGTGAAATTATTTTCCTATTAAACAGTAGAACAAAGACTTTTAACACTTGGTTTAAGAGTGGCCAGTTTGATAGTCGAATGAGAAACTTACTGTCAGCAATGTACAGGGCCATGTGGTGGAGATCATCTGTTTTAATGTTTCTAGTAAGTCAGTGGCAAATATACTTAGTCAGTATGAGGGTGGAAATTCTTTCAAAGCAGGATTCATTTTACTCCAGTTAACCAGGAGTTCGATTTTCTTGAAAGATCAAACATTCTTTAATGAGAAGTACATGCCTTTTTGTGATCATATACAGTTCAAAGCTTCTAGTTGTAGTGCTTCATGCAGTGAGCTTTGCTATCACTCAACTTCTTTGATCAATTTAGACCGGGTGTGTTTTTTTTTTTAGGAACTACGAATCTCCACAATAGTATGATATTGTCCACTCTGAGCCTAAGTTCTTATGGCTTTGCTTTTGGTTTCCCCAAAAGAGCTCATACCAATAGAGATGTATTCCTTACTCATAAACCCATGATCATCCCCTTAATCAGCGAATGCAGTTCTCCCTCCCAATAATCCTCAACAATCCTCCTCTCGAACAAAGTATACCATAGAGCCTCCCCTAAGGCCTATGAACCCTCGAATAGCCTCCCTTTAATCGAGGCTCGACTCCTTCTCTGGAGCCCTCGAACAAAGTACACCTTTTGTTCGACACTTGAGTCACTTTTGACTACACCTTCGAGACTCACAATTTCTTTGTTTAATACTTGAAGATTCTATTGACATGGCTAAGTTAAGGGCATGACTTATGTTAGGAACTACGAATCTCCACAATGATATGATATTGTCCACTCTGAGCTTAGCTCTCATGACTTTGATTTTGGTTTCTCCAAAAGGCCTCATACCAAAAGAGATGTATTCCTTACTTATAAACTCATGATCATCCCCTTAATTAGCCAATGTAGCCAATGTGGGACTCCCTCCCAGTAATCCTCAACATTTTGTAATAATCTCGTTTGGCAAGAGAACTCTCGTCTCCCTTGCCTTTGTGTTTGTTTGATTAAATGCTGTGAAATCAAATCTTGTCTCAAGAAACCTACAAAGGATATTGGGAAGATGTGGTGTTTAGATTCTATTAACTGCCAACACTTTTTTCTGATTGATGTTCTATTTCTCAAATTGGTTTCTTTGGTTTGTCTCTTCTCTTGGCTTTGACACATTTATATTTTCTCTCACTTCATTCTTCTTCATCTGTTGAGTTATGGGGTCAGTTCTACGTTTGTTTGCATTTGGTAAGCTTTGTGCTTGTTATTTTATTTGTTCATTAGTTTTTATTGCATCATATCAAACCAAAATGAGTAAATCTGGTTCTCTCTGTCTCTCTCTTTTTTTTAATAAGATACAGAAAGGGTGTTATAAACCACCAAAAAAAAGGACAGCCTGCTCGTTCACTTTTTGTAAAAATGTATACACACCATATGGACCTGAGTACTAACTTCAATTAATTCACAATTTCCAATTGACTGTGACTATTCAGTATGTTTGTTATGCCATATTTATGTATAGGCCATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAACATCAAGCAAAAATTAGAGTCCCTTATTGATCAGCCAATTGTTGATCAGCGTTTGATCTTGGTGGGAAGCGGGGAAGTATTGGAGGATTCAAAGACACTGGCCGATCAGAAGGTATGCCTTAAATTCATAGATTTACTACATTTGGTCATCTAGCATCGGATATTCTGGAAATATTAAGATGAAGACAATACGACAGCTGCGGCTCTAACTAATATTTGCTATGTATTTCCAGGTTGAAAATGATGCAGTTGTGGCTCTAACGTTGCGAAAAGGTTTTCTTCTACCCACCCCAACATTTTTTTTTGTGAACTTCTTACATGTTTTCTGATTAGGGACTGAATTATTTGAGGGTGGATTTTTTCATAGTTATGCTCAAATTACAGGTCTCAGTCTTTGAACTTTTAAGCTTATGTCTTAATAAGTCATTCAACTTTCAATCTTGTAGTTAATAGGTTACTGAACTTCTGAACTTCAAAAGTATCGAATAAATCTCTAAATTTTCAATTTTGCATTTAATAAGTTCCATCCCAACAATTTTGTGAACTTCTGACGTGTTTTTAAAAGTATATTTTCTGATTAGGGACTGAATTAGTTGTGAGCGTGGACTTTTTCATAGTTATGATCTTGCTTAAATTTCAGGTTTTAGTTTTTGAACGACCTTCAATTTTATGTCTAATAGGTTGCTGAACTTGAAAAGTGTCGTTTTCCTCAAACTTTCAATTTTGTGTTAGTAAGCTTGAAAATTTTAGAACATCTTGATTAAGTCAACGAGCTATTAGACACAACATTAAAAATTTAATGACCTATTAGAAGCAAAATTGAAAATTTAAGAATGTATCTGGCGTTCTTTAAAGCTCAAAGAATTATCATACACAAAATTGAAAGTTGATTGATCTACATTAGTTCATAGACTAAATAGACATAAATATGAAACTTATGATCTTCTTTGTTGGATTTGGATTTAAAATATGGAACCCTGTCTCATCACGCATTTTCTTGATCATTTTCCCTTCTTTGTGTAGATGATAACGAGTTCGAGGAGATCGACATTGTCAGTACAAACGATTTCTACCAATCTCGTGAAGCCGATTCTGGGAATTGGTAAGGACCGAAAGTTTTCTTCTACTATGTGTGGTAGTTTATGATGTTCAGCCATCAAGCTTGTGGTGTATTATTGAAATAACTGTTCTATCAGTTGGATGGAATTGAAAATGATGCATAAGAAAGTAGACTTCATGCAGACTTGGATATCGTAA

mRNA sequence

ATGGCCATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAACATCAAGCAAAAATTAGAGTCCCTTATTGATCAGCCAATTGTTGATCAGCGTTTGATCTTGGTGGGAAGCGGGGAAGTATTGGAGGATTCAAAGACACTGGCCGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTAACGTTGCGAAAAGATGATAACGAGTTCGAGGAGATCGACATTGTCAGTACAAACGATTTCTACCAATCTCGTGAAGCCGATTCTGGGAATTGTTGGATGGAATTGAAAATGATGCATAAGAAAGTAGACTTCATGCAGACTTGGATATCGTAA

Coding sequence (CDS)

ATGGCCATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGCGATCCAATTGAGACAACTTTAAACATCAAGCAAAAATTAGAGTCCCTTATTGATCAGCCAATTGTTGATCAGCGTTTGATCTTGGTGGGAAGCGGGGAAGTATTGGAGGATTCAAAGACACTGGCCGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTAACGTTGCGAAAAGATGATAACGAGTTCGAGGAGATCGACATTGTCAGTACAAACGATTTCTACCAATCTCGTGAAGCCGATTCTGGGAATTGTTGGATGGAATTGAAAATGATGCATAAGAAAGTAGACTTCATGCAGACTTGGATATCGTAA

Protein sequence

MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNCWMELKMMHKKVDFMQTWIS

Homology

[Close]

BLAST of Csor.00g176940 vs. NCBI nr
Match: KAG6586044.1 (hypothetical protein SDJN03_18777, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243 bits (621), Expect = 4.19e-81
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNCWMELKMMHKKVDFMQTW 120
           DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNCWMELKMMHKKVDFMQTW
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGNCWMELKMMHKKVDFMQTW 120

Query: 121 IS 122
           IS
Sbjct: 121 IS 122

[Close]

BLAST of Csor.00g176940 vs. NCBI nr
Match: XP_022937980.1 (uncharacterized protein LOC111444204 [Cucurbita moschata] >XP_022969566.1 uncharacterized protein LOC111468551 [Cucurbita maxima] >XP_023536780.1 uncharacterized protein LOC111798058 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198 bits (504), Expect = 1.59e-63
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN 102
           DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN 102

[Close]

BLAST of Csor.00g176940 vs. NCBI nr
Match: KAG7020821.1 (hypothetical protein SDJN02_17509 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196 bits (499), Expect = 9.20e-63
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN 102
           DQKVENDAVVALTLRKDDNEFEEI+IVSTNDFYQSREADSGN
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEINIVSTNDFYQSREADSGN 102

[Close]

BLAST of Csor.00g176940 vs. NCBI nr
Match: XP_038889494.1 (uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida])

HSP 1 Score: 190 bits (483), Expect = 2.53e-60
Identity = 95/102 (93.14%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLILVGSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN 102
           DQKVENDAVVALTLRKDDN+FEEIDI+  NDFYQSR+AD+GN
Sbjct: 61  DQKVENDAVVALTLRKDDNDFEEIDIIQPNDFYQSRDADAGN 102

[Close]

BLAST of Csor.00g176940 vs. NCBI nr
Match: XP_008452565.1 (PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo])

HSP 1 Score: 187 bits (474), Expect = 5.97e-59
Identity = 94/102 (92.16%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN 102
           DQKVENDAVVALTLRK+DN+FEEI+IV  NDFYQSR+ADSGN
Sbjct: 61  DQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGN 102

[Close]

BLAST of Csor.00g176940 vs. ExPASy TrEMBL
Match: A0A6J1HY58 (uncharacterized protein LOC111468551 OS=Cucurbita maxima OX=3661 GN=LOC111468551 PE=4 SV=1)

HSP 1 Score: 198 bits (504), Expect = 7.70e-64
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN 102
           DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN 102

[Close]

BLAST of Csor.00g176940 vs. ExPASy TrEMBL
Match: A0A6J1FIC7 (uncharacterized protein LOC111444204 OS=Cucurbita moschata OX=3662 GN=LOC111444204 PE=4 SV=1)

HSP 1 Score: 198 bits (504), Expect = 7.70e-64
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN 102
           DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN
Sbjct: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN 102

[Close]

BLAST of Csor.00g176940 vs. ExPASy TrEMBL
Match: A0A1S3BTJ1 (uncharacterized protein LOC103493547 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493547 PE=4 SV=1)

HSP 1 Score: 187 bits (474), Expect = 2.89e-59
Identity = 94/102 (92.16%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN 102
           DQKVENDAVVALTLRK+DN+FEEI+IV  NDFYQSR+ADSGN
Sbjct: 61  DQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGN 102

[Close]

BLAST of Csor.00g176940 vs. ExPASy TrEMBL
Match: A0A5A7UM04 (Ubiquitin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00260 PE=4 SV=1)

HSP 1 Score: 183 bits (464), Expect = 9.09e-58
Identity = 92/100 (92.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 3   MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLADQ 62
           MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLADQ
Sbjct: 1   MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQ 60

Query: 63  KVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN 102
           KVENDAVVALTLRK+DN+FEEI+IV  NDFYQSR+ADSGN
Sbjct: 61  KVENDAVVALTLRKEDNDFEEINIVHPNDFYQSRDADSGN 100

[Close]

BLAST of Csor.00g176940 vs. ExPASy TrEMBL
Match: A0A1S4DYF9 (uncharacterized protein LOC103493547 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493547 PE=4 SV=1)

HSP 1 Score: 182 bits (461), Expect = 2.69e-57
Identity = 94/102 (92.16%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQSREADSGN 102
           DQKVENDAVVALTLRKD N+FEEI+IV  NDFYQSR+ADSGN
Sbjct: 61  DQKVENDAVVALTLRKD-NDFEEINIVHPNDFYQSRDADSGN 101

[Close]

BLAST of Csor.00g176940 vs. TAIR 10
Match: AT5G57860.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 3.6e-32
Identity = 66/92 (71.74%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
          MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QP+ +QRL+L+ + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVENDAVVALTLRKDDNEFEEIDIVSTNDF 93
          DQKVENDAVVALTL+KDDNEFE+++I    DF
Sbjct: 61 DQKVENDAVVALTLKKDDNEFEDVNIAQPTDF 92

[Close]

BLAST of Csor.00g176940 vs. TAIR 10
Match: AT5G57860.3 (Ubiquitin-like superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 3.6e-32
Identity = 66/92 (71.74%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
          MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QP+ +QRL+L+ + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVENDAVVALTLRKDDNEFEEIDIVSTNDF 93
          DQKVENDAVVALTL+KDDNEFE+++I    DF
Sbjct: 61 DQKVENDAVVALTLKKDDNEFEDVNIAQPTDF 92

[Close]

BLAST of Csor.00g176940 vs. TAIR 10
Match: AT5G57860.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 3.6e-32
Identity = 66/92 (71.74%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
          MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QP+ +QRL+L+ + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVENDAVVALTLRKDDNEFEEIDIVSTNDF 93
          DQKVENDAVVALTL+KDDNEFE+++I    DF
Sbjct: 61 DQKVENDAVVALTLKKDDNEFEDVNIAQPTDF 92

[Close]

BLAST of Csor.00g176940 vs. TAIR 10
Match: AT5G57860.4 (Ubiquitin-like superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 3.1e-20
Identity = 46/66 (69.70%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60
          MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QP+ +QRL+L+ + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVEN 67
          DQKV +
Sbjct: 61 DQKVSH 66

[Close]

BLAST of Csor.00g176940 vs. TAIR 10
Match: AT5G37640.1 (ubiquitin 9 )

HSP 1 Score: 42.7 bits (99), Expect = 2.4e-04
Identity = 27/76 (35.53%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 1  MAMYIRIKR-HKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTL 60
          M+M I  K   + T  I     +T  N+K K++ +   P+  QRLI   SG++L+D +TL
Sbjct: 1  MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIF--SGKLLDDGRTL 60

Query: 61 ADQKVENDAVVALTLR 76
          AD  ++ D+++ L LR
Sbjct: 61 ADYSIQKDSILHLALR 74

The following BLAST results are available for this feature:

BLAST of Csor.00g176940 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g176940 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6586044.1	4.19e-81	100.00	hypothetical protein SDJN03_18777, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022937980.1	1.59e-63	100.00	uncharacterized protein LOC111444204 [Cucurbita moschata] >XP_022969566.1 unchar...	[more]
KAG7020821.1	9.20e-63	99.02	hypothetical protein SDJN02_17509 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038889494.1	2.53e-60	93.14	uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida]	[more]
XP_008452565.1	5.97e-59	92.16	PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo]	[more]

BLAST of Csor.00g176940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HY58	7.70e-64	100.00	uncharacterized protein LOC111468551 OS=Cucurbita maxima OX=3661 GN=LOC111468551...	[more]
A0A6J1FIC7	7.70e-64	100.00	uncharacterized protein LOC111444204 OS=Cucurbita moschata OX=3662 GN=LOC1114442...	[more]
A0A1S3BTJ1	2.89e-59	92.16	uncharacterized protein LOC103493547 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7UM04	9.09e-58	92.00	Ubiquitin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00260 PE=4...	[more]
A0A1S4DYF9	2.69e-57	92.16	uncharacterized protein LOC103493547 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Csor.00g176940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57860.1	3.6e-32	71.74	Ubiquitin-like superfamily protein	[more]
AT5G57860.3	3.6e-32	71.74	Ubiquitin-like superfamily protein	[more]
AT5G57860.2	3.6e-32	71.74	Ubiquitin-like superfamily protein	[more]
AT5G57860.4	3.1e-20	69.70	Ubiquitin-like superfamily protein	[more]
AT5G37640.1	2.4e-04	35.53	ubiquitin 9	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 3..75 e-value: 7.4E-9 score: 45.4
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 5..76 e-value: 5.9E-10 score: 38.8
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..79 score: 15.405305
None	No IPR available	GENE3D	3.10.20.90		coord: 1..93 e-value: 1.5E-19 score: 71.9
None	No IPR available	PANTHER	PTHR47725	OS03G0364000 PROTEIN	coord: 1..99
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g176940.m01	Csor.00g176940.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding