Csor.00g175190 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGATGACAGGTCGCATGGAAATGGGTTCGGCGGGGACATCAACACAGAGAGCAACTCCGCCACAAACCCTGGAAGCTCATACGAATTGAGGTCATATTCCGCGTCTTATGCGCAGACCCAGATGGAGACGAAGAAAGGGGAAAAGGGTTGTGGGTCTTTCCCCAAGTCTTGGAGCTTGTCGGACCCTGAATTTCAGAGGAAGAAGAGGGTTGCTAGCTACAAGATGTACTCTGTGGAAGGCAAAATGAAGGGGTCTTTCAGAAACAGCTTCCGATGGCTGAAGCGCAGATGCGAACAGGTGGTTTATGGGTGGTGGTGATTCATTTGCCTCTCTTTCTCCTTAATCTCTGTAAGTGCTTTCTCATCATAATTCCAACAATTGTAATGTTCATCTTGATAAGAACACTTCGAATTGAATGTTTTTGGGATGCTGGGATTTGTTGTGGATAGAACAGAAGTGGTTTGATTTTAGCACCCTGGTAGCTCAGAGTTTCATAGCTTGATGACTGATTCAATGATTTTACATTTCAAACATCATGCTTTTGTTTAGAATTTGTTTAGACACAGTCCCATATCAGTGGTTAGATGTGGATAAAATGTGGTTCGTTTTTTGGGTTGAATCTTGAAACAAAATTGCACAGTTTCCGTCTAAAGTGAACTATGTCGAGTGTAAGGATTGTCGCTCAATGGATAAAAGTTATCCAATCGCTCACATCGACGGAAAGGTTTGACACCTTGATGTGGACTCTTCGCCATCTAGGGCTGTAGTATGTTACTAAGGGTTGGGTTATTCATCCATTAAAACAGTACGTGAGCTGGGTTTATAATGTCATGAGATATCAAGAGGCCACGACTGCAGTATGTTACAATGGTTGGGTTATTCATCCATTACAATGGTACGTGAGCTGGGTTCATAATGTCGTGAGATATCAAGAGGCCACGACTGTAGTATGTTACAAGTGTTGGATTATTCATCCATTAAAATGGTACGTGAGCTGAGTTCATAATGTCGGGAGATATCAAGAGGCCACGAAGAAACTGTTATTAGTGTACATTTTAGTTTGATGCAATTTTCGTGCTAGGTTCTCGAGTTGCTTTGAAGCTTTTTAACACATCACTGTTCCTCAAAGCCATTAACGCTTACTAATGTTGTTTGTTTGTTTGTTTGTTCTATTATAGTCAAATGAAGGGTTGGTTGGTTTATAATGACTTTTCAAAAATTATTTTTTAAGCTGCCACAGTTTGGACTTGGACTTTGAGACAGAACATTGGTCTAGGCCCATTGGGCCTAATTCTAGTATAGGCCCATTTCCAACATGGAAGTAAAGCCCACTGGATGGGCCCACAGTTTGTGTTTGGGCTTTGAGACTGAAACATTGGTCTGAATCACATTGGGCCTAGTTCTAGTAAAGGCCCATTTTCAATACCCACTTAAAGCCTACAGGAATGGGAATAAATGGATTATAACAAAGCTTACGGCCCAAAAACCTAAATTTAGGTGAAATTTCATTTATGCCCCCAATGATTTGGGCTTACATCAATTAAAATTCAAAACTACCTATTATATAAATTTAAACAGATTAATATAATTAGAAATAAACAAATAAATATTAGTGATTTTTTTTATATTAAATTTAAAAGATTTTTAAATAAAAAATAGTATAAATTGATTAAATTGATAATATAAATTAATTATTAATTTTTTAATTGGTTGGTCTTATATAATAAAACTGGTGAAAAATGGGTCCACAACTTTTTTTCTATTTTTTTTTATTTGTTTATGCTTTTGGTACGTTTTTATTAATTTAATATATTCTCACTCTTTTTTTCTTTAGATAAAAATTGATTCCCGTTCAGTACAACGTTACTAACAATAACTTTAATGAATTAATATTTTAAAATTCGAATTTAAACCAATTTAACTTTAATGAACATGGTTAAACTGTTGAGGCTAATTTAGATCATAAGTTCATGAGTAAAGGAATGGATCTTGATTGGTGTGAGACTTTTTGGAGACGCCGAAAGCAAAGTCATTAGACCTCCCGGTTTTGGTTCATTGGTCGCTGGCTGTCGTGGTCAGGTAGCCAACCAATGGAGGGAGGAAGCATGAAGGATGAGGTGATGTGCATGGTGGGCGGCAAGCAGGAGAGGCAGTGGCAGCGGCAGCCGATCTGTGGCGGTGCCGCTGCAGGACAGCCAGTTGCATGGCGTCAAACTGTCAGCTTGCCTCCGCCATAA ATGGAAGATGACAGGTCGCATGGAAATGGGTTCGGCGGGGACATCAACACAGAGAGCAACTCCGCCACAAACCCTGGAAGCTCATACGAATTGAGGTCATATTCCGCGTCTTATGCGCAGACCCAGATGGAGACGAAGAAAGGGGAAAAGGGTTGTGGGTCTTTCCCCAAGTCTTGGAGCTTGTCGGACCCTGAATTTCAGAGGAAGAAGAGGGTTGCTAGCTACAAGATGTACTCTGTGGAAGGCAAAATGAAGGGGTCTTTCAGAAACAGCTTCCGATGGCTGAAGCGCAGATGCGAACAGTTTCCGTCTAAAGTGAACTATGTCGAGTGTAGCCAACCAATGGAGGGAGGAAGCATGAAGGATGAGGTGATGTGCATGGTGGGCGGCAAGCAGGAGAGGCAGTGGCAGCGGCAGCCGATCTGTGGCGGTGCCGCTGCAGGACAGCCAGTTGCATGGCGTCAAACTGTCAGCTTGCCTCCGCCATAA ATGGAAGATGACAGGTCGCATGGAAATGGGTTCGGCGGGGACATCAACACAGAGAGCAACTCCGCCACAAACCCTGGAAGCTCATACGAATTGAGGTCATATTCCGCGTCTTATGCGCAGACCCAGATGGAGACGAAGAAAGGGGAAAAGGGTTGTGGGTCTTTCCCCAAGTCTTGGAGCTTGTCGGACCCTGAATTTCAGAGGAAGAAGAGGGTTGCTAGCTACAAGATGTACTCTGTGGAAGGCAAAATGAAGGGGTCTTTCAGAAACAGCTTCCGATGGCTGAAGCGCAGATGCGAACAGTTTCCGTCTAAAGTGAACTATGTCGAGTGTAGCCAACCAATGGAGGGAGGAAGCATGAAGGATGAGGTGATGTGCATGGTGGGCGGCAAGCAGGAGAGGCAGTGGCAGCGGCAGCCGATCTGTGGCGGTGCCGCTGCAGGACAGCCAGTTGCATGGCGTCAAACTGTCAGCTTGCCTCCGCCATAA MEDDRSHGNGFGGDINTESNSATNPGSSYELRSYSASYAQTQMETKKGEKGCGSFPKSWSLSDPEFQRKKRVASYKMYSVEGKMKGSFRNSFRWLKRRCEQFPSKVNYVECSQPMEGGSMKDEVMCMVGGKQERQWQRQPICGGAAAGQPVAWRQTVSLPPP Homology
BLAST of Csor.00g175190 vs. NCBI nr
Match: KAG6591473.1 (hypothetical protein SDJN03_13819, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 333 bits (855), Expect = 1.72e-115 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Csor.00g175190 vs. NCBI nr
Match: KAG7024353.1 (hypothetical protein SDJN02_13167, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 199 bits (505), Expect = 6.19e-63 Identity = 99/101 (98.02%), Postives = 99/101 (98.02%), Query Frame = 0
BLAST of Csor.00g175190 vs. NCBI nr
Match: XP_022975771.1 (uncharacterized protein LOC111476369 [Cucurbita maxima]) HSP 1 Score: 187 bits (474), Expect = 3.26e-58 Identity = 94/101 (93.07%), Postives = 94/101 (93.07%), Query Frame = 0
BLAST of Csor.00g175190 vs. NCBI nr
Match: XP_022136638.1 (uncharacterized protein LOC111008293 [Momordica charantia] >XP_022158308.1 uncharacterized protein LOC111024820 [Momordica charantia]) HSP 1 Score: 149 bits (375), Expect = 4.38e-43 Identity = 78/106 (73.58%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of Csor.00g175190 vs. NCBI nr
Match: KAA0064509.1 (uncharacterized protein E6C27_scaffold255G002260 [Cucumis melo var. makuwa] >TYK20081.1 uncharacterized protein E5676_scaffold134G002050 [Cucumis melo var. makuwa]) HSP 1 Score: 149 bits (375), Expect = 4.38e-43 Identity = 79/105 (75.24%), Postives = 85/105 (80.95%), Query Frame = 0
BLAST of Csor.00g175190 vs. ExPASy TrEMBL
Match: A0A6J1IF42 (uncharacterized protein LOC111476369 OS=Cucurbita maxima OX=3661 GN=LOC111476369 PE=4 SV=1) HSP 1 Score: 187 bits (474), Expect = 1.58e-58 Identity = 94/101 (93.07%), Postives = 94/101 (93.07%), Query Frame = 0
BLAST of Csor.00g175190 vs. ExPASy TrEMBL
Match: A0A6J1C841 (uncharacterized protein LOC111008293 OS=Momordica charantia OX=3673 GN=LOC111008293 PE=4 SV=1) HSP 1 Score: 149 bits (375), Expect = 2.12e-43 Identity = 78/106 (73.58%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of Csor.00g175190 vs. ExPASy TrEMBL
Match: A0A5D3D951 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002050 PE=4 SV=1) HSP 1 Score: 149 bits (375), Expect = 2.12e-43 Identity = 79/105 (75.24%), Postives = 85/105 (80.95%), Query Frame = 0
BLAST of Csor.00g175190 vs. ExPASy TrEMBL
Match: A0A0A0L414 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646210 PE=4 SV=1) HSP 1 Score: 146 bits (369), Expect = 1.73e-42 Identity = 78/105 (74.29%), Postives = 84/105 (80.00%), Query Frame = 0
BLAST of Csor.00g175190 vs. ExPASy TrEMBL
Match: A0A7J9EXC4 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_005671 PE=4 SV=1) HSP 1 Score: 106 bits (264), Expect = 1.04e-26 Identity = 56/83 (67.47%), Postives = 62/83 (74.70%), Query Frame = 0
BLAST of Csor.00g175190 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 85.1 bits (209), Expect = 5.6e-17 Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = 0
BLAST of Csor.00g175190 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 76.3 bits (186), Expect = 2.6e-14 Identity = 49/113 (43.36%), Postives = 66/113 (58.41%), Query Frame = 0
BLAST of Csor.00g175190 vs. TAIR 10
Match: AT3G13910.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 63.2 bits (152), Expect = 2.3e-10 Identity = 28/40 (70.00%), Postives = 33/40 (82.50%), Query Frame = 0
BLAST of Csor.00g175190 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 59.7 bits (143), Expect = 2.5e-09 Identity = 30/73 (41.10%), Postives = 40/73 (54.79%), Query Frame = 0
BLAST of Csor.00g175190 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 55.1 bits (131), Expect = 6.2e-08 Identity = 28/54 (51.85%), Postives = 34/54 (62.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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