Csor.00g173840 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g173840
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Calmodulin
Location	Csor_Chr09: 784277 .. 784831 (+)
RNA-Seq Expression	Csor.00g173840
Synteny	Csor.00g173840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCTTTCACCCATTTCCACTCCCTTCAAATGGTTTTCCAACACCAATCTCAAGCTCAACCTCCCTCGCCTTCGCTTCAAACATAAGCCCACCCGGTCTAACCCTCCTCCTCCACCACTACTCCTCCTCACGCCTGCGCCCCCGCTCGCCGAAGCTGCCTTCCGCCACCTCGATGCCGATGGAGACGGCAAAATCTCAGGGGACGAGCTCCAATCCTACTTTGCATCGGTCGGTGAGTACATGACACGGGACGATGCTCGAAGTCTGATAAGAGAGTTCGATGGGGATGGTGACTTGTTGCTGGAGCTCGGAGACTTCGAACGGCTGGTGAAGGGCGGGGAGGAGGAAGAGAAGGAGGATCTGAAAAGGGCTTTTGAGATGTTTGAAGGTGAAAAGGGATGCGGATTCATCGGACCGGCAGGGCTGCAAAAGATGTTTGGACGGCTTGGATACGTGAAATCCATAGAAGAGTGCATGGCTATGATCGGAGTGTTTGATGTTGACGGCGACGGTGTCATTGATTATCGTGAATTTCTCAGAATGATGACTTAA

mRNA sequence

ATGGCCCTTTCACCCATTTCCACTCCCTTCAAATGGTTTTCCAACACCAATCTCAAGCTCAACCTCCCTCGCCTTCGCTTCAAACATAAGCCCACCCGGTCTAACCCTCCTCCTCCACCACTACTCCTCCTCACGCCTGCGCCCCCGCTCGCCGAAGCTGCCTTCCGCCACCTCGATGCCGATGGAGACGGCAAAATCTCAGGGGACGAGCTCCAATCCTACTTTGCATCGGTCGGTGAGTACATGACACGGGACGATGCTCGAAGTCTGATAAGAGAGTTCGATGGGGATGGTGACTTGTTGCTGGAGCTCGGAGACTTCGAACGGCTGGTGAAGGGCGGGGAGGAGGAAGAGAAGGAGGATCTGAAAAGGGCTTTTGAGATGTTTGAAGGTGAAAAGGGATGCGGATTCATCGGACCGGCAGGGCTGCAAAAGATGTTTGGACGGCTTGGATACGTGAAATCCATAGAAGAGTGCATGGCTATGATCGGAGTGTTTGATGTTGACGGCGACGGTGTCATTGATTATCGTGAATTTCTCAGAATGATGACTTAA

Coding sequence (CDS)

ATGGCCCTTTCACCCATTTCCACTCCCTTCAAATGGTTTTCCAACACCAATCTCAAGCTCAACCTCCCTCGCCTTCGCTTCAAACATAAGCCCACCCGGTCTAACCCTCCTCCTCCACCACTACTCCTCCTCACGCCTGCGCCCCCGCTCGCCGAAGCTGCCTTCCGCCACCTCGATGCCGATGGAGACGGCAAAATCTCAGGGGACGAGCTCCAATCCTACTTTGCATCGGTCGGTGAGTACATGACACGGGACGATGCTCGAAGTCTGATAAGAGAGTTCGATGGGGATGGTGACTTGTTGCTGGAGCTCGGAGACTTCGAACGGCTGGTGAAGGGCGGGGAGGAGGAAGAGAAGGAGGATCTGAAAAGGGCTTTTGAGATGTTTGAAGGTGAAAAGGGATGCGGATTCATCGGACCGGCAGGGCTGCAAAAGATGTTTGGACGGCTTGGATACGTGAAATCCATAGAAGAGTGCATGGCTATGATCGGAGTGTTTGATGTTGACGGCGACGGTGTCATTGATTATCGTGAATTTCTCAGAATGATGACTTAA

Protein sequence

MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFLRMMT

Homology

[Close]

BLAST of Csor.00g173840 vs. ExPASy Swiss-Prot
Match: Q8L3R2 (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 PE=2 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-29
Identity = 84/197 (42.64%), Postives = 105/197 (53.30%), Query Frame = 0


Query: 5   PISTPFKWFSNTNLKLNLPRLRFKHKP----------TRSNPPPPPLLLLTPA-PPLAEA 64
           P S  FKWFS   LKLNL     +  P           RSN      +    A       
Sbjct: 8   PSSNSFKWFSTKTLKLNLSFQNRRRSPKSNSSSTLNSPRSNSDDNNNIKSHQASKEELRQ 67

Query: 65  AFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVK- 124
            F H D+DGDGKIS  EL+ YF SVGEY++ + A+  I E D D D  L   DF  L+  
Sbjct: 68  VFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLMTR 127

Query: 125 -----GGEEEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFD 184
                 GE +   +LK AFEMFE EKG G I P GLQKM  +LG  ++  EC AMI  +D
Sbjct: 128 RDLYGDGEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFYD 187

[Close]

BLAST of Csor.00g173840 vs. ExPASy Swiss-Prot
Match: Q9SRE6 (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.1e-20
Identity = 53/133 (39.85%), Postives = 86/133 (64.66%), Query Frame = 0


Query: 52  EAAFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLV 111
           EA F ++DA+ DG+IS +ELQ  F ++GE ++ ++A + +R  D DGD +L+  +F +L+
Sbjct: 45  EAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLI 104

Query: 112 KGGEEEEKE-DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDG 171
           K  +EEEK+ +LK AF ++  E G   I P  L+ M  +LG  ++ ++C  MI  FD++ 
Sbjct: 105 KVDDEEEKKMELKGAFRLYIAE-GEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNA 164

Query: 172 DGVIDYREFLRMM 184
           DGV+ + EF  MM
Sbjct: 165 DGVLSFDEFALMM 176

[Close]

BLAST of Csor.00g173840 vs. ExPASy Swiss-Prot
Match: Q9SRE7 (Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 51/136 (37.50%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 52  EAAFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLV 111
           EA F ++DA+ DG+IS +EL+  F ++GE M+ ++A + ++  D DGD +L++ +F  L+
Sbjct: 24  EAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLI 83

Query: 112 KGG----EEEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFD 171
           KG     EEE+K  +  AF M+  + G   I P  L+ M  +LG  ++ ++C  MI  FD
Sbjct: 84  KGNDEFTEEEKKRKIMEAFRMYIAD-GEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFD 143

Query: 172 VDGDGVIDYREFLRMM 184
           ++ DGV+ + EF  MM
Sbjct: 144 LNADGVLSFDEFALMM 158

[Close]

BLAST of Csor.00g173840 vs. ExPASy Swiss-Prot
Match: Q8RYJ8 (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 GN=CML19 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 6.6e-19
Identity = 60/134 (44.78%), Postives = 78/134 (58.21%), Query Frame = 0


Query: 55  FRHLDADGDGKISGDELQSYF-ASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLV-- 114
           F   D D DGKIS  EL+    A++GE M+ ++A +L+   D D D LL+  +F +L   
Sbjct: 12  FSAFDRDADGKISAAELRLCMKAALGEDMSAEEAEALVSSADTDDDGLLDEEEFTKLAVQ 71

Query: 115 --KGGEEEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVD 174
              G EEE    L  AF M+E E G G I PA L++M  +LG  + IEEC  MI  FD+D
Sbjct: 72  LEMGDEEERCRGLMEAFRMYEME-GEGRITPASLKRMLSKLGSHQGIEECQTMICRFDLD 131

Query: 175 GDGVIDYREFLRMM 184
           GDGVI + EF  MM
Sbjct: 132 GDGVISFEEFKIMM 144

[Close]

BLAST of Csor.00g173840 vs. ExPASy Swiss-Prot
Match: Q6L4D4 (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 GN=CML15 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 56/145 (38.62%), Postives = 82/145 (56.55%), Query Frame = 0


Query: 46  PAPPLA----EAAFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLL 105
           P PP A    E  FR  DA+GDG+IS  EL + F SVG  +T D+   +++E D DGD  
Sbjct: 47  PRPPAAEDETERVFRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEADSDGDGY 106

Query: 106 LELGDFERL---VKGGEEEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEE 165
           + LG+F  +     G     +EDL+ AF +F+ + G G I PA L ++   +G   ++ +
Sbjct: 107 ISLGEFAAISAPPPGDAAAAEEDLRHAFGVFDAD-GNGVITPAELARVLRGIGEAATVAQ 166

Query: 166 CMAMIGVFDVDGDGVIDYREFLRMM 184
           C  MI   D +GDG+I++ EF  MM
Sbjct: 167 CRRMIDGVDRNGDGLINFEEFKLMM 190

[Close]

BLAST of Csor.00g173840 vs. NCBI nr
Match: KAG6591338.1 (putative calcium-binding protein CML41, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 375 bits (963), Expect = 3.11e-131
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 60
           MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA
Sbjct: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 60

Query: 61  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 120
           DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE
Sbjct: 61  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 120

Query: 121 DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 180
           DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL
Sbjct: 121 DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 180

Query: 181 RMMT 184
           RMMT
Sbjct: 181 RMMT 184

[Close]

BLAST of Csor.00g173840 vs. NCBI nr
Match: KAG7024217.1 (putative calcium-binding protein CML41, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 370 bits (950), Expect = 2.98e-129
Identity = 182/184 (98.91%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 60
           MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA
Sbjct: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 60

Query: 61  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 120
           DGDGKISGDELQSYFASVGEYMTRD+ARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE
Sbjct: 61  DGDGKISGDELQSYFASVGEYMTRDNARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 120

Query: 121 DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 180
           DLKRAFEMFE EKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL
Sbjct: 121 DLKRAFEMFEEEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 180

Query: 181 RMMT 184
           RMMT
Sbjct: 181 RMMT 184

[Close]

BLAST of Csor.00g173840 vs. NCBI nr
Match: XP_022936314.1 (probable calcium-binding protein CML41 [Cucurbita moschata])

HSP 1 Score: 366 bits (939), Expect = 1.37e-127
Identity = 181/184 (98.37%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 60
           MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLL TPAPPLAEAAFRHLDA
Sbjct: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLL-TPAPPLAEAAFRHLDA 60

Query: 61  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 120
           DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGE+EEKE
Sbjct: 61  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEQEEKE 120

Query: 121 DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 180
           DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDG+GVIDYREFL
Sbjct: 121 DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGNGVIDYREFL 180

Query: 181 RMMT 184
           RMMT
Sbjct: 181 RMMT 183

[Close]

BLAST of Csor.00g173840 vs. NCBI nr
Match: XP_023535419.1 (calmodulin-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367 bits (941), Expect = 2.61e-127
Identity = 179/184 (97.28%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 60
           MALSP+STPFKWFSNTN  LN PRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA
Sbjct: 38  MALSPVSTPFKWFSNTNFNLNFPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 97

Query: 61  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 120
           DGDGKISGDELQSYFASVGEYMTRDDARSLIREFD DGDLLLELGDFERLVKGGEEEEKE
Sbjct: 98  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDWDGDLLLELGDFERLVKGGEEEEKE 157

Query: 121 DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 180
           DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL
Sbjct: 158 DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 217

Query: 181 RMMT 184
           RMMT
Sbjct: 218 RMMT 221

[Close]

BLAST of Csor.00g173840 vs. NCBI nr
Match: XP_022974919.1 (probable calcium-binding protein CML41 [Cucurbita maxima])

HSP 1 Score: 365 bits (937), Expect = 4.71e-127
Identity = 179/184 (97.28%), Postives = 179/184 (97.28%), Query Frame = 0


Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 60
           MALSPISTPFKWFSNTN KLN PRLRFKHKPT SNPPPPPLLLLTPAPPLAEAAFRHLDA
Sbjct: 15  MALSPISTPFKWFSNTNFKLNFPRLRFKHKPTPSNPPPPPLLLLTPAPPLAEAAFRHLDA 74

Query: 61  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 120
           DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE
Sbjct: 75  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 134

Query: 121 DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 180
           DLK AFEMFEGEKGCGFIGP GLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL
Sbjct: 135 DLKMAFEMFEGEKGCGFIGPPGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 194

Query: 181 RMMT 184
           RMMT
Sbjct: 195 RMMT 198

[Close]

BLAST of Csor.00g173840 vs. ExPASy TrEMBL
Match: A0A6J1F7Y7 (probable calcium-binding protein CML41 OS=Cucurbita moschata OX=3662 GN=LOC111442970 PE=4 SV=1)

HSP 1 Score: 366 bits (939), Expect = 6.64e-128
Identity = 181/184 (98.37%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 60
           MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLL TPAPPLAEAAFRHLDA
Sbjct: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLL-TPAPPLAEAAFRHLDA 60

Query: 61  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 120
           DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGE+EEKE
Sbjct: 61  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEQEEKE 120

Query: 121 DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 180
           DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDG+GVIDYREFL
Sbjct: 121 DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGNGVIDYREFL 180

Query: 181 RMMT 184
           RMMT
Sbjct: 181 RMMT 183

[Close]

BLAST of Csor.00g173840 vs. ExPASy TrEMBL
Match: A0A6J1IIY2 (probable calcium-binding protein CML41 OS=Cucurbita maxima OX=3661 GN=LOC111473738 PE=4 SV=1)

HSP 1 Score: 365 bits (937), Expect = 2.28e-127
Identity = 179/184 (97.28%), Postives = 179/184 (97.28%), Query Frame = 0


Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 60
           MALSPISTPFKWFSNTN KLN PRLRFKHKPT SNPPPPPLLLLTPAPPLAEAAFRHLDA
Sbjct: 15  MALSPISTPFKWFSNTNFKLNFPRLRFKHKPTPSNPPPPPLLLLTPAPPLAEAAFRHLDA 74

Query: 61  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 120
           DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE
Sbjct: 75  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 134

Query: 121 DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 180
           DLK AFEMFEGEKGCGFIGP GLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL
Sbjct: 135 DLKMAFEMFEGEKGCGFIGPPGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 194

Query: 181 RMMT 184
           RMMT
Sbjct: 195 RMMT 198

[Close]

BLAST of Csor.00g173840 vs. ExPASy TrEMBL
Match: A0A5A7UHX6 (Putative calcium-binding protein CML41 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27333G00010 PE=4 SV=1)

HSP 1 Score: 278 bits (710), Expect = 4.18e-93
Identity = 139/184 (75.54%), Postives = 150/184 (81.52%), Query Frame = 0


Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 60
           MA+S I+ PFKWF+ TN KLN P L  KHKP  S PP PP        PLAE AFRHLD 
Sbjct: 1   MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISSKPPTPP--------PLAEVAFRHLDI 60

Query: 61  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 120
           DGDGKISGDEL+SYFAS+GEYMT D A+S+I +FD DGD LLELGDFERLVKG EEE++E
Sbjct: 61  DGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEE 120

Query: 121 DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 180
           DLKRAFEMFEGEKGCGFIG  GLQKMFGRLGYVKS E+CM MI VFDVDGDGVIDY EFL
Sbjct: 121 DLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFL 176

Query: 181 RMMT 184
           RMMT
Sbjct: 181 RMMT 176

[Close]

BLAST of Csor.00g173840 vs. ExPASy TrEMBL
Match: A0A1S3CT00 (probable calcium-binding protein CML41 OS=Cucumis melo OX=3656 GN=LOC103503982 PE=4 SV=1)

HSP 1 Score: 278 bits (710), Expect = 4.18e-93
Identity = 139/184 (75.54%), Postives = 150/184 (81.52%), Query Frame = 0


Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 60
           MA+S I+ PFKWF+ TN KLN P L  KHKP  S PP PP        PLAE AFRHLD 
Sbjct: 1   MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISSKPPTPP--------PLAEVAFRHLDI 60

Query: 61  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 120
           DGDGKISGDEL+SYFAS+GEYMT D A+S+I +FD DGD LLELGDFERLVKG EEE++E
Sbjct: 61  DGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEE 120

Query: 121 DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 180
           DLKRAFEMFEGEKGCGFIG  GLQKMFGRLGYVKS E+CM MI VFDVDGDGVIDY EFL
Sbjct: 121 DLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFL 176

Query: 181 RMMT 184
           RMMT
Sbjct: 181 RMMT 176

[Close]

BLAST of Csor.00g173840 vs. ExPASy TrEMBL
Match: A0A6J1CDM6 (probable calcium-binding protein CML41 OS=Momordica charantia OX=3673 GN=LOC111010501 PE=4 SV=1)

HSP 1 Score: 265 bits (678), Expect = 5.03e-88
Identity = 133/184 (72.28%), Postives = 149/184 (80.98%), Query Frame = 0


Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLLTPAPPLAEAAFRHLDA 60
           + +  +S  FKWFS +N KLN PRL F  KPT SNPPPPPL     APPLAE AF HLDA
Sbjct: 3   IPIPTVSIAFKWFSKSNFKLNFPRLLFNPKPTSSNPPPPPLKA---APPLAEVAFHHLDA 62

Query: 61  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 120
           DGDGKIS DEL+SYFAS+GE +TRDD R +IR+FDG+GD LLEL DF RL++  EEEE E
Sbjct: 63  DGDGKISCDELRSYFASIGECITRDDVRRVIRDFDGNGDELLELQDFARLMEVQEEEEGE 122

Query: 121 DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 180
           DL+RAFEMFE EKGCGFIGP GLQKMF RLGYVKS +ECMAMI VFD++GDGVIDYREFL
Sbjct: 123 DLRRAFEMFEVEKGCGFIGPEGLQKMFRRLGYVKSSDECMAMIDVFDINGDGVIDYREFL 182

Query: 181 RMMT 184
           RMM 
Sbjct: 183 RMMA 183

[Close]

BLAST of Csor.00g173840 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 )

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-30
Identity = 84/197 (42.64%), Postives = 105/197 (53.30%), Query Frame = 0


Query: 5   PISTPFKWFSNTNLKLNLPRLRFKHKP----------TRSNPPPPPLLLLTPA-PPLAEA 64
           P S  FKWFS   LKLNL     +  P           RSN      +    A       
Sbjct: 8   PSSNSFKWFSTKTLKLNLSFQNRRRSPKSNSSSTLNSPRSNSDDNNNIKSHQASKEELRQ 67

Query: 65  AFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVK- 124
            F H D+DGDGKIS  EL+ YF SVGEY++ + A+  I E D D D  L   DF  L+  
Sbjct: 68  VFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLMTR 127

Query: 125 -----GGEEEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFD 184
                 GE +   +LK AFEMFE EKG G I P GLQKM  +LG  ++  EC AMI  +D
Sbjct: 128 RDLYGDGEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFYD 187

[Close]

BLAST of Csor.00g173840 vs. TAIR 10
Match: AT1G76650.1 (calmodulin-like 38 )

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-21
Identity = 53/133 (39.85%), Postives = 86/133 (64.66%), Query Frame = 0


Query: 52  EAAFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLV 111
           EA F ++DA+ DG+IS +ELQ  F ++GE ++ ++A + +R  D DGD +L+  +F +L+
Sbjct: 45  EAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLI 104

Query: 112 KGGEEEEKE-DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDG 171
           K  +EEEK+ +LK AF ++  E G   I P  L+ M  +LG  ++ ++C  MI  FD++ 
Sbjct: 105 KVDDEEEKKMELKGAFRLYIAE-GEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNA 164

Query: 172 DGVIDYREFLRMM 184
           DGV+ + EF  MM
Sbjct: 165 DGVLSFDEFALMM 176

[Close]

BLAST of Csor.00g173840 vs. TAIR 10
Match: AT1G76650.3 (calmodulin-like 38 )

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-21
Identity = 53/133 (39.85%), Postives = 86/133 (64.66%), Query Frame = 0


Query: 52  EAAFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLV 111
           EA F ++DA+ DG+IS +ELQ  F ++GE ++ ++A + +R  D DGD +L+  +F +L+
Sbjct: 45  EAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLI 104

Query: 112 KGGEEEEKE-DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDG 171
           K  +EEEK+ +LK AF ++  E G   I P  L+ M  +LG  ++ ++C  MI  FD++ 
Sbjct: 105 KVDDEEEKKMELKGAFRLYIAE-GEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNA 164

Query: 172 DGVIDYREFLRMM 184
           DGV+ + EF  MM
Sbjct: 165 DGVLSFDEFALMM 176

[Close]

BLAST of Csor.00g173840 vs. TAIR 10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 97.8 bits (242), Expect = 9.5e-21
Identity = 51/136 (37.50%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 52  EAAFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLV 111
           EA F ++DA+ DG+IS +EL+  F ++GE M+ ++A + ++  D DGD +L++ +F  L+
Sbjct: 24  EAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLI 83

Query: 112 KGG----EEEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFD 171
           KG     EEE+K  +  AF M+  + G   I P  L+ M  +LG  ++ ++C  MI  FD
Sbjct: 84  KGNDEFTEEEKKRKIMEAFRMYIAD-GEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFD 143

Query: 172 VDGDGVIDYREFLRMM 184
           ++ DGV+ + EF  MM
Sbjct: 144 LNADGVLSFDEFALMM 158

[Close]

BLAST of Csor.00g173840 vs. TAIR 10
Match: AT4G12860.1 (EF hand calcium-binding protein family )

HSP 1 Score: 90.1 bits (222), Expect = 2.0e-18
Identity = 47/133 (35.34%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 55  FRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKG- 114
           F+  D +GDGKI+ +EL+ +F SVG  +  ++   +I + D +GD  +++ +F  L +  
Sbjct: 10  FQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGSLYQEM 69

Query: 115 -GEEEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYV--KSIEECMAMIGVFDVDG 174
             E+EE+ED++ AF +F+ + G GFI    L+ +   +G    +++E+C  MI   DVDG
Sbjct: 70  VEEKEEEEDMREAFRVFD-QNGDGFITDEELRSVLASMGLKQGRTLEDCKKMISKVDVDG 129

Query: 175 DGVIDYREFLRMM 184
           DG+++++EF +MM
Sbjct: 130 DGMVNFKEFKQMM 141

The following BLAST results are available for this feature:

BLAST of Csor.00g173840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3R2	1.4e-29	42.64	Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 ...	[more]
Q9SRE6	2.1e-20	39.85	Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1	[more]
Q9SRE7	1.3e-19	37.50	Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1	[more]
Q8RYJ8	6.6e-19	44.78	Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q6L4D4	1.1e-18	38.62	Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of Csor.00g173840 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591338.1	3.11e-131	100.00	putative calcium-binding protein CML41, partial [Cucurbita argyrosperma subsp. s...	[more]
KAG7024217.1	2.98e-129	98.91	putative calcium-binding protein CML41, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_022936314.1	1.37e-127	98.37	probable calcium-binding protein CML41 [Cucurbita moschata]	[more]
XP_023535419.1	2.61e-127	97.28	calmodulin-like protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022974919.1	4.71e-127	97.28	probable calcium-binding protein CML41 [Cucurbita maxima]	[more]

BLAST of Csor.00g173840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F7Y7	6.64e-128	98.37	probable calcium-binding protein CML41 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1IIY2	2.28e-127	97.28	probable calcium-binding protein CML41 OS=Cucurbita maxima OX=3661 GN=LOC1114737...	[more]
A0A5A7UHX6	4.18e-93	75.54	Putative calcium-binding protein CML41 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CT00	4.18e-93	75.54	probable calcium-binding protein CML41 OS=Cucumis melo OX=3656 GN=LOC103503982 P...	[more]
A0A6J1CDM6	5.03e-88	72.28	probable calcium-binding protein CML41 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Csor.00g173840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50770.1	1.0e-30	42.64	calmodulin-like 41	[more]
AT1G76650.1	1.5e-21	39.85	calmodulin-like 38	[more]
AT1G76650.3	1.5e-21	39.85	calmodulin-like 38	[more]
AT1G76640.1	9.5e-21	37.50	Calcium-binding EF-hand family protein	[more]
AT4G12860.1	2.0e-18	35.34	EF hand calcium-binding protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 86..114 e-value: 15.0 score: 8.2 coord: 158..184 e-value: 0.36 score: 19.9 coord: 50..78 e-value: 7.2E-4 score: 28.9
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 53..111 e-value: 1.0E-9 score: 38.7
IPR002048	EF-hand domain	PFAM	PF00036	EF-hand_1	coord: 158..184 e-value: 5.0E-7 score: 28.8
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 46..81 score: 12.951263
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 82..117 score: 8.739058
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 154..184 score: 13.899706
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 52..99 e-value: 1.47316E-11 score: 55.2465
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 121..184 e-value: 1.30831E-9 score: 50.2389
None	No IPR available	GENE3D	1.10.238.10		coord: 114..184 e-value: 2.0E-15 score: 58.5
None	No IPR available	GENE3D	1.10.238.10		coord: 44..113 e-value: 2.6E-14 score: 55.6
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 17..184
None	No IPR available	PANTHER	PTHR23050:SF393	CALMODULIN	coord: 17..184
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 59..71
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 167..179
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 53..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g173840.m01	Csor.00g173840.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050790	regulation of catalytic activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0030234	enzyme regulator activity