
Csor.00g173740 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCGCCAAAAGCATCGGTAGCTCAATGTTGGTGCCACTATGCACCGTTACTGCAGCAGCCACTGCTGTTGCCGCTGGGAAGAGTGAACGATTAGTTTCATGAGGCTTGATACTTTTAACCCAATCTCGATTCTGGATTTAACGTACCACTAATGGTTATATCTAACTTTCAGTACAGTGACCAAAGTACCAAGGTGAGAAGTCGGAGCACCAACAACGATCTGGGTTGGGAAAGTAAGAATTGAGGCCATGTATTCTATTAGAGGGCAATGAGTAATAAAGCCCAAATTTTTTTTGGTATTGTTATGCCTTGGGCAGTTTAGATTGATTTGTAGATTTGTTAATGTAGGTTCGGTCTGAGTCAGAGTTGAACCGATATTTCTAGTAGTGATTAAGGAAAGCGTTTGAGGGAAGGGACTTTCCTATTGAAACTAACCTGTTTTGTTTCCTAAAATACGATTGGATGTGTATGCCATTATATGGGTTGCTATATGAATGTTGTTGTATGTTGTCATGCTTATTGATCATGGAAATAATTGGTTTTGGACCGCATATGTGCATGTTATGATTTTTGAATGAAATAAATGTGGTAAGGGTTACACGCTGCGCGCGTAGCTAGCTATTATTGGTCACATGGGTAATTGTTGAAAATTATTTTCGTGGTAAGGGTTACACACTGTGTGTATCGAGTAACCAATCACTATTGGTCACTGAGGGCTGATTGCTGAAAACAATTTTAGGAAAGTAGATTACATACTAGTACGAGTAATCAACCATCAATGTCCCTTGATTTTGATTGATGAAGTATTATGATATTTTACATATATGACCCTAACCACGCTAAACATTTTAATACTCACCCTATTTTAAGATCTGTTTTTAGATGAGGACAAGACTATAGCATGAGAGTGGCGAGTAGGGTGGAAAGGACGGTCGTGTAACAACTCAAAGTCTTATGTTTTAATTTACTATTTAAAACACTTCTGCACTAATTTTATTATTTAACGTTTTGTTAGAACATTCCTAATCTATGAGAACCAGGAAATTTTGGAATGATGTCGTCATCTTTAATTACCTTATTCTGAAACTATTTAGTTAAATTGTATGTTTTTAAATTATTTAGAAAGGATATAAGCATGTTTGAATATATTTTAAATTTTAAATTTTTTTATTGTTTTTTTTCTTGCAAATTATTTTAAATTATAAGGTTTTTTTTTTAATTAATTTAATAAAAAAAACTATTTTTTAAAGATTATTACAAATAAAGAGACTAAATATAGACAGAATTTCATGCACTAAATAATATATATATAATATATATAATTTATTTATTTATTTATTAATTTTGGCTTTTTGAGTTTCCATTAGGGTTGTTGGCTAAAATAGAATTTCGAATTGGGGACTAATAGAATTTTGGGTTCTAATCTTTACAAAAACTTCCTCTTTAAACCACCACACTACCAGCGACAACGAGGACTTGCGGCTTCGTTCGGCTCCTTTTTCCATTTGCAGTTGTATTTCTTTCATTTTCAGTTTGATTTCATATAGATTCTAAGAGTTAATTCGGGTGAGTTTCTCTAACGTATATCATAATTTCGTTTATGGGATTCTTCTGTACTCTGCTTGTTCTTGCCTTCTCTTGATTCCAATTTTCCAAGTGTATGAACTACTGGCTAATTCATTTTTTTCTTGCAAATTTGTTGAGTTTATAGTAGGTTTATATGTTCACACTATGGGATTCATGTTTAGGGCTCTGGTTGTAGAATTAATAACTTGGAAGTTTCTTCCAGGAACTTCTATTTTGTTATTCAACACATCCTGCTGCTGCCCCTACTGTAGTTATGGAGACAAAGACGGATAGTAATGATGGCTCACTCGTTTTAATTAAGCAAGGAGCTGAAGCTGTAAGTCTGAATCTCTAGTCCATTAATCTGGGATGTTCTTTGGAAAAGGGAGATTATTCTATAAACAACATTTTTGGAAGAAGTACTAATTAAGTTTTTTAGAACTTTCAGAATTAATTTTCTCTTTGTAAGCAAACATAGTGAAGAATTTGAAAAATGTTTTTCATTGTTCCAAAAGTTATACCAAACTCATCTTACGAATTTTAGGTATTAAGTACACAGGTCTTTTGTTATATTGTTTTTTGTTTTTACCTTGCAGAGAGTGTTTGAGTCTACTTTCGTAGGAAGGCGATCGATTGTTAAGGAACGATTCTCAAAGAAATATAGACATCCATCTCTGGATTCCAAACTCACACTCAAGCGATTGAATGCAGTTTGTTTTCTTCTAATGAAACGCCTTTTTGTAGTTGAAGAAGTAACTAGCGAAAAGATTGTCTTGCATATGTTTGACTGGAACTAAATGATATAGGAAGCAAGGTGCATGACCAAAGCTAGGCGACTCGCGGTTTCTACTCCAGTGTTGTATGCCGTTGACCCGATACTATATACCCTGACATTTGAGTACGTGGAAGGTCGTTCTGTGAAAGATATATTACTTGAAATTGGGTCAAGTGGTGATGGTTCGAAACAGTTGAAGGACATTGCAATGCAGATCGGCGTTGCAATTGGGAAGTTGCATGATGGTGGTTTAATTCATGGTGATTTGACGACGTCTAACATGTTGGTCAGGAGTAGTACCAATGAACTTGTGAGTTGAATCTTTGGTTATAATAATTTACAATGTGACAAAATTTTAGTTTGTCGTGCTAAGATTTGTAATAAATTGATCTCTGTCGTAAGAGCAATTGTCTTTTCTCAGGTCCTTATTGATTTTGGTCTGAGCTTTACTTCAACTATTCCTGAAGATAAAGCAGTTGATCTATATGTGTTGGAACGAGCACTGCTATCGATGCATTCTTCATGTGGCAATGTGGTAAGTTGGTTTCCCTTGCACTTGGTTTGCTGTAAGTTTTTCTTTTTTTTTTCTTTTTTTTTTGTCCTTCCCAATTAGAGATTAGTGATTGATAGGAGGAGATGACGATTAGAGTTCTATTGTGAGATCTCACCTCGGTTGGGGAGGAGAACGAAGTATTCTTTTTAAGTGTGTGGAAACTTCTCCATAGTAGATGCATTTTAAAAACTTTGAGGGGAAGCCCAAAAGGAAAAGTCTGAAGAGGACAATATTTGCTAGCGGTGGGCTTGGGCTATTACAAATGGTATTAGAGCTAGAAACTGGGTCATGTGCCAGCGAAGAGGTTGAGCCCTAAAGGGAGTGGACACGAGGCGGTGTGCCAGCAAAGACGCTAGGAGGGGGTGGATTGGGAGGTCCCACATCGATTGTATAAAGGGAACGAGTGCCAATGAGGACACTGGGCCTCGAAGGGGGGTGGGTGGATTGTGAGATCCCACATCGATTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGAAAACCTCTCCTTAGCAGACACGTTTTAAAAACTTTGAGAGGAAGCCTGAAAAGGAAAACCCAAAAAAAACAACATTGGCTAGCAGTGGGTTTGGGCTGCCACATCTATCTAGATAGGAAGTACCCAAAAGATGTAACTATAAATCAAGACCCCTTGCTTCTCTCATGCACGATGTTATCTGCTGAATGACAAAAGAAGTTAACAGACTTCCGGCCTTCTGCTAGCCATATTTTACACCATCCTCCATGCAATTTTACTATTTATCATGCCCTCTGTGCCCATTCCTCTTATTTCTCTAATCCTAGAACTATGCAAAAAGAGGGATATTGAGATTCCTCCCAGGATTCTCTCCTGCAAGCTGACATATTCATATTCTGCTAAATGACCAAAATAAATTAACAATTTTCTCTCGTTCTGTTAAGTGTATGTTTCTAACCTTCCCTCTTGCAACTCTACTGTTATCTCAGTGTAGAATTCGTAGCGTAGTTATAAAATGTGGTTCCCTTTCTTAGTCTAACTCAGTCGTGAGGGCTGCAGTTTACTAATGCTGTATTACAATAAACGACCCACAATTTTCTTCTGTTAGTTTGCTTGCTCAATTTGGGGCCGGTTTTTGGAGGCCGATGGGGGGTAGTTTAGCCCGTAACCGGGACTGTTGCCATACGTTGAAGAGGGTTTTCTTTCACCCTCCCCTCAGGCATATGGCCGTTCCTCTAGAGTGCTAGTGTTTATGCAGTGTTATGGGATGGCTTGAGGGAAACAATAAAACCTGTGGAAAAGTGGTCTGGGAGGAGGTATAGTCCCTTGCTAGGTTTGATGCCTCACTTGAGGCATCGGTCTCCGAAGTCTTTTGTTATTACATGTCAGGCTTAGGTTTGTGGCTCTTTTTTTAGGCTATCATTTAGTTGGCCCTCTTGTTGGTTTTTTGTTTTAATGATTTTCATGCAATCGTATGACTACTTGCTGACAAACTGGGCTGAATTGATACCCAAATTGATATACATTGATGGTTCTTACATATTTTATAGATGGAGCAAATTCTTGCTTCATACCGGAAGACTTCGAAACAGTGGTCATCAACCTCGAACAAATTAGCTCAAGGTAGTGATCCCGTCTTTTATCATTCATTGTCTGTTTTATTCCCTATGATTTCTTAGTTTACTTCTCTTGCTTTTCACTTTGATTTTACAGTGCGTCAGCGAGGCCGAAAACGCACCATGGTTGGTTAA ATGACCGCCAAAAGCATCGAGTTAATTCGGGAACTTCTATTTTGTTATTCAACACATCCTGCTGCTGCCCCTACTGTAGTTATGGAGACAAAGACGGATAGTAATGATGGCTCACTCGTTTTAATTAAGCAAGGAGCTGAAGCTAGAGTGTTTGAGTCTACTTTCGTAGGAAGGCGATCGATTGTTAAGGAACGATTCTCAAAGAAATATAGACATCCATCTCTGGATTCCAAACTCACACTCAAGCGATTGAATGCAGAAGCAAGGTGCATGACCAAAGCTAGGCGACTCGCGGTTTCTACTCCAGTGTTGTATGCCGTTGACCCGATACTATATACCCTGACATTTGAGTACGTGGAAGGTCGTTCTGTGAAAGATATATTACTTGAAATTGGGTCAAGTGGTGATGGTTCGAAACAGTTGAAGGACATTGCAATGCAGATCGGCGTTGCAATTGGGAAGTTGCATGATGGTGGTTTAATTCATGGTGATTTGACGACGTCTAACATGTTGGTCAGGAGTAGTACCAATGAACTTGTCCTTATTGATTTTGGTCTGAGCTTTACTTCAACTATTCCTGAAGATAAAGCAGTTGATCTATATGTGTTGGAACGAGCACTGCTATCGATGCATTCTTCATGTGGCAATGTGATGGAGCAAATTCTTGCTTCATACCGGAAGACTTCGAAACAGTGGTCATCAACCTCGAACAAATTAGCTCAAGTGCGTCAGCGAGGCCGAAAACGCACCATGGTTGGTTAA ATGACCGCCAAAAGCATCGAGTTAATTCGGGAACTTCTATTTTGTTATTCAACACATCCTGCTGCTGCCCCTACTGTAGTTATGGAGACAAAGACGGATAGTAATGATGGCTCACTCGTTTTAATTAAGCAAGGAGCTGAAGCTAGAGTGTTTGAGTCTACTTTCGTAGGAAGGCGATCGATTGTTAAGGAACGATTCTCAAAGAAATATAGACATCCATCTCTGGATTCCAAACTCACACTCAAGCGATTGAATGCAGAAGCAAGGTGCATGACCAAAGCTAGGCGACTCGCGGTTTCTACTCCAGTGTTGTATGCCGTTGACCCGATACTATATACCCTGACATTTGAGTACGTGGAAGGTCGTTCTGTGAAAGATATATTACTTGAAATTGGGTCAAGTGGTGATGGTTCGAAACAGTTGAAGGACATTGCAATGCAGATCGGCGTTGCAATTGGGAAGTTGCATGATGGTGGTTTAATTCATGGTGATTTGACGACGTCTAACATGTTGGTCAGGAGTAGTACCAATGAACTTGTCCTTATTGATTTTGGTCTGAGCTTTACTTCAACTATTCCTGAAGATAAAGCAGTTGATCTATATGTGTTGGAACGAGCACTGCTATCGATGCATTCTTCATGTGGCAATGTGATGGAGCAAATTCTTGCTTCATACCGGAAGACTTCGAAACAGTGGTCATCAACCTCGAACAAATTAGCTCAAGTGCGTCAGCGAGGCCGAAAACGCACCATGGTTGGTTAA MTAKSIELIRELLFCYSTHPAAAPTVVMETKTDSNDGSLVLIKQGAEARVFESTFVGRRSIVKERFSKKYRHPSLDSKLTLKRLNAEARCMTKARRLAVSTPVLYAVDPILYTLTFEYVEGRSVKDILLEIGSSGDGSKQLKDIAMQIGVAIGKLHDGGLIHGDLTTSNMLVRSSTNELVLIDFGLSFTSTIPEDKAVDLYVLERALLSMHSSCGNVMEQILASYRKTSKQWSSTSNKLAQVRQRGRKRTMVG Homology
BLAST of Csor.00g173740 vs. ExPASy Swiss-Prot
Match: Q54W07 (EKC/KEOPS complex subunit bud32 OS=Dictyostelium discoideum OX=44689 GN=bud32 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.9e-49 Identity = 108/233 (46.35%), Postives = 146/233 (62.66%), Query Frame = 0
BLAST of Csor.00g173740 vs. ExPASy Swiss-Prot
Match: Q96S44 (EKC/KEOPS complex subunit TP53RK OS=Homo sapiens OX=9606 GN=TP53RK PE=1 SV=2) HSP 1 Score: 183.0 bits (463), Expect = 4.3e-45 Identity = 104/218 (47.71%), Postives = 139/218 (63.76%), Query Frame = 0
BLAST of Csor.00g173740 vs. ExPASy Swiss-Prot
Match: Q99PW4 (EKC/KEOPS complex subunit Tp53rk OS=Mus musculus OX=10090 GN=Tp53rk PE=2 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 3.1e-43 Identity = 103/218 (47.25%), Postives = 136/218 (62.39%), Query Frame = 0
BLAST of Csor.00g173740 vs. ExPASy Swiss-Prot
Match: Q4HYC1 (EKC/KEOPS complex subunit BUD32 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=BUD32 PE=3 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 5.7e-37 Identity = 100/229 (43.67%), Postives = 134/229 (58.52%), Query Frame = 0
BLAST of Csor.00g173740 vs. ExPASy Swiss-Prot
Match: Q9P7N1 (EKC/KEOPS complex subunit SPAP27G11.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP27G11.07c PE=3 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.4e-35 Identity = 88/217 (40.55%), Postives = 131/217 (60.37%), Query Frame = 0
BLAST of Csor.00g173740 vs. NCBI nr
Match: KAG6588447.1 (EKC/KEOPS complex subunit bud32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 482 bits (1240), Expect = 3.61e-171 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
BLAST of Csor.00g173740 vs. NCBI nr
Match: XP_023529406.1 (EKC/KEOPS complex subunit bud32 [Cucurbita pepo subsp. pepo] >XP_023529407.1 EKC/KEOPS complex subunit bud32 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 427 bits (1098), Expect = 5.96e-150 Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 0
BLAST of Csor.00g173740 vs. NCBI nr
Match: XP_022924768.1 (EKC/KEOPS complex subunit bud32 [Cucurbita moschata] >XP_022924777.1 EKC/KEOPS complex subunit bud32 [Cucurbita moschata] >XP_022924786.1 EKC/KEOPS complex subunit bud32 [Cucurbita moschata] >XP_022924793.1 EKC/KEOPS complex subunit bud32 [Cucurbita moschata]) HSP 1 Score: 426 bits (1096), Expect = 1.20e-149 Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 0
BLAST of Csor.00g173740 vs. NCBI nr
Match: XP_022971395.1 (EKC/KEOPS complex subunit bud32 isoform X1 [Cucurbita maxima] >XP_022971403.1 EKC/KEOPS complex subunit bud32 isoform X1 [Cucurbita maxima]) HSP 1 Score: 425 bits (1093), Expect = 3.45e-149 Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 0
BLAST of Csor.00g173740 vs. NCBI nr
Match: KAG7022296.1 (EKC/KEOPS complex subunit bud32 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 414 bits (1063), Expect = 2.64e-144 Identity = 224/246 (91.06%), Postives = 225/246 (91.46%), Query Frame = 0
BLAST of Csor.00g173740 vs. ExPASy TrEMBL
Match: A0A6J1EDH5 (Non-specific serine/threonine protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111432168 PE=3 SV=1) HSP 1 Score: 426 bits (1096), Expect = 5.82e-150 Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 0
BLAST of Csor.00g173740 vs. ExPASy TrEMBL
Match: A0A6J1I5M0 (Non-specific serine/threonine protein kinase OS=Cucurbita maxima OX=3661 GN=LOC111470128 PE=3 SV=1) HSP 1 Score: 425 bits (1093), Expect = 1.67e-149 Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 0
BLAST of Csor.00g173740 vs. ExPASy TrEMBL
Match: A0A6J1DK25 (Non-specific serine/threonine protein kinase OS=Momordica charantia OX=3673 GN=LOC111021824 PE=3 SV=1) HSP 1 Score: 409 bits (1051), Expect = 4.19e-143 Identity = 212/226 (93.81%), Postives = 219/226 (96.90%), Query Frame = 0
BLAST of Csor.00g173740 vs. ExPASy TrEMBL
Match: A0A1S3BPU1 (Non-specific serine/threonine protein kinase OS=Cucumis melo OX=3656 GN=LOC103492219 PE=3 SV=1) HSP 1 Score: 401 bits (1030), Expect = 6.64e-140 Identity = 208/226 (92.04%), Postives = 217/226 (96.02%), Query Frame = 0
BLAST of Csor.00g173740 vs. ExPASy TrEMBL
Match: A0A5D3CF78 (Non-specific serine/threonine protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003400 PE=3 SV=1) HSP 1 Score: 401 bits (1030), Expect = 6.64e-140 Identity = 208/226 (92.04%), Postives = 217/226 (96.02%), Query Frame = 0
BLAST of Csor.00g173740 vs. TAIR 10
Match: AT5G26110.1 (Protein kinase superfamily protein ) HSP 1 Score: 346.7 bits (888), Expect = 1.6e-95 Identity = 178/226 (78.76%), Postives = 200/226 (88.50%), Query Frame = 0
BLAST of Csor.00g173740 vs. TAIR 10
Match: AT5G26110.2 (Protein kinase superfamily protein ) HSP 1 Score: 249.6 bits (636), Expect = 2.7e-66 Identity = 126/163 (77.30%), Postives = 144/163 (88.34%), Query Frame = 0
BLAST of Csor.00g173740 vs. TAIR 10
Match: AT1G08120.1 (BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G26110.1); Has 235 Blast hits to 235 proteins in 96 species: Archae - 21; Bacteria - 0; Metazoa - 117; Fungi - 8; Plants - 47; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 1.5e-16 Identity = 48/70 (68.57%), Postives = 55/70 (78.57%), Query Frame = 0
BLAST of Csor.00g173740 vs. TAIR 10
Match: AT5G01850.1 (Protein kinase superfamily protein ) HSP 1 Score: 45.8 bits (107), Expect = 5.9e-05 Identity = 42/156 (26.92%), Postives = 72/156 (46.15%), Query Frame = 0
BLAST of Csor.00g173740 vs. TAIR 10
Match: AT3G50720.1 (Protein kinase superfamily protein ) HSP 1 Score: 42.4 bits (98), Expect = 6.5e-04 Identity = 28/86 (32.56%), Postives = 42/86 (48.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|