Csor.00g172970 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g172970
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	aquaporin NIP2-1-like
Location	Csor_Chr11: 5855470 .. 5857173 (+)
RNA-Seq Expression	Csor.00g172970
Synteny	Csor.00g172970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACATCCTTGGCTTCATCGCCGGCCAAGGAATGGGATGTGACATTTAGGTAGCATAATTCCAACACTTTAGAGCATAGAGATAGGTAGGTTGTTAATCTAATAAATGTAAGGAACTTTCCGTCTTTTAAGATGTTTCGTCTAACCCTACTATGACTAGTGTCTCACACTGCCTAATAACCTAACTTTGATACAATTTGTAACAGCCCAAGCCCACCGCTAGCTGATATCGTCTTCTTTTAGCTTTTCCTTCTGAGTTTGCTCTCAAAGTTTTAAAACGCGTTTGCTAGGGAGAAGTTTCCATATCCTTATACGAAATGTTTTGTTTCCCTCTCCAACTAACGTGGGATCTCACATTGATTGGAGAAAGGAACGAATCATTCCTTACAAGGGTGTGGAAATTTTTCCCTAGTAGACGCGTTTTAAAACTGTGAAGCTGATAACGTTACGTAATAGGCCAAAACGGACAATATCTACCAACGGTAGGCTTAGGTTGTTACATATAGCTTCCTAAAGTTAGCTTGAGGCTATGTAACTTACTAGATTGACTATACCTCCATTGTATGCAGCAGCTCAATTGAGTGGGGCAACCTGTGCAGCCTTTACACTGCGCCTATTATTACATCCCATCAAACACTTGGGCACTACCACGCCATCAGGATCAGATTTACAAGCACTCGTCATGGAGATTGTTGTTACCTTCTCAATGATGTTTGTCACTTGTGCTGTTGCAACCGATACCAAAGCCGTAAGATTCTGTACTTTTCCTCTAATCGTTTTAGAACGGTCTAAGCTCACTGTTAGTCGTCGTTGTCTTTTTCAAACTTCTCAATGAGCAGTTTTATTCTCTAATTGATGTGAGATCTCATAATCCACTTCCTTTTGGGGCCAGCGTCTTCGCTGACACTCGTTCTTCTCTCTAATTAATGTGGGATCTCACGTAAAATTTAAATATAAGTATGGTTTAAACATTAGTACGTTGATTAAATTTATATATTTAGTTAGTATAAACTATAGTATAAATGAAAGAAATTAAAAAGAATGTCACTTAATAAAATTTTATTCCTAAAGTTTTGATTTCATTAAATAAATGGCTGTTGTTTTGACAGGTGGGAGAGCTGGCAGGTTTGGCAGTTGGTTCTGCCGTGTGTATCACATCCATCTTGGCTGGGTAAGGAAGCACACGATTTTTGGTTTCCATTTTCACCCATAAAAATTTAATTTTTTTATTATATAATTATTTATTTATTATTACTATTATTATTTACATATTCTTTTGAAATCATGATTTTTGACTACCAATCACAAATTTTTAAACTTCACAAACCATACAAAACCACATTATTTTATTAAAAAATATATATTGTAAGTACCCGGGAGTAATTTTACTCAACACGTTTTTTATAATTGACATATTATTAAACAAATAAATCTAATAAGAATTTGTGTTAGCCACAATTCAGACCCGTATCAGGTGGGTCGATGAACCCTGTGAGGACATTAGGACCTGCAATGGCAAGTGATAATTATAAAGGACTTTGGGTGTACTTTGTTGGGCCGGTTACAGGAACCCTATTAGGGGCATGGTCATATAAGTTCATACGTGCCAGTGATAAACCTGTGCACTTAATTTCTCCTCACTCATTTTCACTCAAACTTCGAAGAATGTCAAGATCTGACGTTGGTGAAGGTGAAAGATGA

mRNA sequence

ATGGCCACATCCTTGGCTTCATCGCCGGCCAAGGAATGGGATGTGACATTTAGATTGACTATACCTCCATTGTATGCAGCAGCTCAATTGAGTGGGGCAACCTGTGCAGCCTTTACACTGCGCCTATTATTACATCCCATCAAACACTTGGGCACTACCACGCCATCAGGATCAGATTTACAAGCACTCGTCATGGAGATTGTTGTTACCTTCTCAATGATGTTTGTCACTTGTGCTGTTGCAACCGATACCAAAGCCGTGGGAGAGCTGGCAGGTTTGGCAGTTGGTTCTGCCGTGTGTATCACATCCATCTTGGCTGGACCCGTATCAGGTGGGTCGATGAACCCTGTGAGGACATTAGGACCTGCAATGGCAAGTGATAATTATAAAGGACTTTGGGTGTACTTTGTTGGGCCGGTTACAGGAACCCTATTAGGGGCATGGTCATATAAGTTCATACGTGCCAGTGATAAACCTGTGCACTTAATTTCTCCTCACTCATTTTCACTCAAACTTCGAAGAATGTCAAGATCTGACGTTGGTGAAGGTGAAAGATGA

Coding sequence (CDS)

ATGGCCACATCCTTGGCTTCATCGCCGGCCAAGGAATGGGATGTGACATTTAGATTGACTATACCTCCATTGTATGCAGCAGCTCAATTGAGTGGGGCAACCTGTGCAGCCTTTACACTGCGCCTATTATTACATCCCATCAAACACTTGGGCACTACCACGCCATCAGGATCAGATTTACAAGCACTCGTCATGGAGATTGTTGTTACCTTCTCAATGATGTTTGTCACTTGTGCTGTTGCAACCGATACCAAAGCCGTGGGAGAGCTGGCAGGTTTGGCAGTTGGTTCTGCCGTGTGTATCACATCCATCTTGGCTGGACCCGTATCAGGTGGGTCGATGAACCCTGTGAGGACATTAGGACCTGCAATGGCAAGTGATAATTATAAAGGACTTTGGGTGTACTTTGTTGGGCCGGTTACAGGAACCCTATTAGGGGCATGGTCATATAAGTTCATACGTGCCAGTGATAAACCTGTGCACTTAATTTCTCCTCACTCATTTTCACTCAAACTTCGAAGAATGTCAAGATCTGACGTTGGTGAAGGTGAAAGATGA

Protein sequence

MATSLASSPAKEWDVTFRLTIPPLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVATDTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTGTLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER

Homology

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BLAST of Csor.00g172970 vs. ExPASy Swiss-Prot
Match: Q9ATN2 (Aquaporin NIP2-2 OS=Zea mays OX=4577 GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50
Identity = 103/153 (67.32%), Postives = 120/153 (78.43%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 82
           P Y AAQ +GA CAAF L+ +LHPI  +GTTTPSG    AL++EIVVTF+MMFVTCAVAT
Sbjct: 130 PFYWAAQFTGAMCAAFVLKAVLHPIAVIGTTTPSGPHWHALLIEIVVTFNMMFVTCAVAT 189

Query: 83  DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 142
           D++AVGELAGLAVGSAVCITSI AGPVSGGSMNP RTL PA+AS+ + GLW+YF+GPV G
Sbjct: 190 DSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGLWIYFLGPVIG 249

Query: 143 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRM 176
           TL GAW Y +IR  + P    +    S KLRRM
Sbjct: 250 TLSGAWVYTYIRFEEAPAAKDTQRLSSFKLRRM 282

[Close]

BLAST of Csor.00g172970 vs. ExPASy Swiss-Prot
Match: Q67WJ8 (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-2 PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.3e-50
Identity = 106/165 (64.24%), Postives = 124/165 (75.15%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 82
           P Y AAQ +GA CAAF LR +L+PI+ LGTTTP+G    ALV+EIVVTF+MMFVTCAVAT
Sbjct: 130 PFYWAAQFTGAMCAAFVLRAVLYPIEVLGTTTPTGPHWHALVIEIVVTFNMMFVTCAVAT 189

Query: 83  DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 142
           D++AVGELAGLAVGSAVCITSI AGPVSGGSMNP RTL PA+AS+ Y GLW+YF+GPV G
Sbjct: 190 DSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVYTGLWIYFLGPVVG 249

Query: 143 TLLGAWSYKFIRASDKPVHL--ISPHSF-SLKLRRMSRSDVGEGE 185
           TL GAW Y +IR  + P      +P    S KLRR+    +   E
Sbjct: 250 TLSGAWVYTYIRFEEAPAAAGGAAPQKLSSFKLRRLQSQSMAADE 294

[Close]

BLAST of Csor.00g172970 vs. ExPASy Swiss-Prot
Match: Q19KC1 (Aquaporin NIP2-1 OS=Zea mays OX=4577 GN=NIP2-1 PE=2 SV=2)

HSP 1 Score: 198.7 bits (504), Expect = 5.6e-50
Identity = 103/159 (64.78%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 82
           P Y AAQ +G+ CA+F L+ +LHPI  LGTTTP+G    +LV+EI+VTF+MMFVT AVAT
Sbjct: 125 PFYWAAQFTGSICASFVLKAVLHPIAVLGTTTPTGPHWHSLVIEIIVTFNMMFVTLAVAT 184

Query: 83  DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 142
           DT+AVGELAGLAVGSAVCITSI AG VSGGSMNP RTLGPA+AS+ Y GLW+YF+GPV G
Sbjct: 185 DTRAVGELAGLAVGSAVCITSIFAGAVSGGSMNPARTLGPALASNLYTGLWIYFLGPVLG 244

Query: 143 TLLGAWSYKFIRASDKPVHL-ISPHSFSLKLRRMSRSDV 181
           TL GAW+Y +IR  + P H  +S    S KLRR+    V
Sbjct: 245 TLSGAWTYTYIRFEEAPSHKDMSQKLSSFKLRRLQSQSV 283

[Close]

BLAST of Csor.00g172970 vs. ExPASy Swiss-Prot
Match: Q6Z2T3 (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-1 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.1e-49
Identity = 98/153 (64.05%), Postives = 119/153 (77.78%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 82
           P Y AAQ +GA CA+F L+ ++HP+  +GTTTP G    +LV+E++VTF+MMFVT AVAT
Sbjct: 127 PFYWAAQFTGAICASFVLKAVIHPVDVIGTTTPVGPHWHSLVVEVIVTFNMMFVTLAVAT 186

Query: 83  DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 142
           DT+AVGELAGLAVGSAVCITSI AG +SGGSMNP RTLGPA+AS+ + GLW+YF+GPV G
Sbjct: 187 DTRAVGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPALASNKFDGLWIYFLGPVMG 246

Query: 143 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRM 176
           TL GAW+Y FIR  D P    S    S KLRR+
Sbjct: 247 TLSGAWTYTFIRFEDTPKEGSSQKLSSFKLRRL 279

[Close]

BLAST of Csor.00g172970 vs. ExPASy Swiss-Prot
Match: Q9AT74 (Aquaporin NIP2-3 OS=Zea mays OX=4577 GN=NIP2-3 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.3e-48
Identity = 102/155 (65.81%), Postives = 118/155 (76.13%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 82
           P Y AAQ +GA CAAF L+ +L PI  +GTTTPSG    AL +EIVVTF+MMFVTCAVAT
Sbjct: 133 PFYWAAQFTGAMCAAFVLKAVLQPIAVIGTTTPSGPHWHALAIEIVVTFNMMFVTCAVAT 192

Query: 83  DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 142
           D++AVGELAGLAVGSAVCITSI AGPVSGGSMNP RTL PA+AS+ + GLW+YF+GPV G
Sbjct: 193 DSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGLWIYFLGPVVG 252

Query: 143 TLLGAWSYKFIRASDKPVHL--ISPHSFSLKLRRM 176
           TL GAW Y +IR  + P      +    S KLRRM
Sbjct: 253 TLSGAWVYTYIRFEEAPAAAKPDTQRLSSFKLRRM 287

[Close]

BLAST of Csor.00g172970 vs. NCBI nr
Match: KAG6588370.1 (Aquaporin NIP2-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 362 bits (928), Expect = 7.29e-126
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MATSLASSPAKEWDVTFRLTIPPLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDL 60
           MATSLASSPAKEWDVTFRLTIPPLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDL
Sbjct: 1   MATSLASSPAKEWDVTFRLTIPPLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDL 60

Query: 61  QALVMEIVVTFSMMFVTCAVATDTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTL 120
           QALVMEIVVTFSMMFVTCAVATDTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTL
Sbjct: 61  QALVMEIVVTFSMMFVTCAVATDTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTL 120

Query: 121 GPAMASDNYKGLWVYFVGPVTGTLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDV 180
           GPAMASDNYKGLWVYFVGPVTGTLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDV
Sbjct: 121 GPAMASDNYKGLWVYFVGPVTGTLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDV 180

Query: 181 GEGER 185
           GEGER
Sbjct: 181 GEGER 185

[Close]

BLAST of Csor.00g172970 vs. NCBI nr
Match: XP_023529347.1 (aquaporin NIP2-1-like [Cucurbita pepo subsp. pepo] >KAG7022218.1 Aquaporin NIP2-1 [Cucurbita argyrosperma subsp. argyrosperma] >CAD67694.1 Nod26-like protein [Cucurbita pepo])

HSP 1 Score: 318 bits (815), Expect = 4.29e-107
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 82
           PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT
Sbjct: 126 PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 185

Query: 83  DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 142
           DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG
Sbjct: 186 DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 245

Query: 143 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 185
           TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER
Sbjct: 246 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 288

[Close]

BLAST of Csor.00g172970 vs. NCBI nr
Match: XP_022934019.1 (aquaporin NIP2-1-like [Cucurbita moschata] >BAK09175.1 silicon transporter 1 [Cucurbita moschata])

HSP 1 Score: 318 bits (815), Expect = 4.29e-107
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 82
           PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT
Sbjct: 126 PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 185

Query: 83  DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 142
           DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG
Sbjct: 186 DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 245

Query: 143 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 185
           TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER
Sbjct: 246 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 288

[Close]

BLAST of Csor.00g172970 vs. NCBI nr
Match: XP_022971831.1 (aquaporin NIP2-1-like [Cucurbita maxima])

HSP 1 Score: 318 bits (815), Expect = 4.29e-107
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 82
           PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT
Sbjct: 126 PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 185

Query: 83  DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 142
           DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG
Sbjct: 186 DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 245

Query: 143 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 185
           TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER
Sbjct: 246 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 288

[Close]

BLAST of Csor.00g172970 vs. NCBI nr
Match: BAK09176.1 (silicon transporter 1 [Cucurbita moschata])

HSP 1 Score: 314 bits (805), Expect = 1.42e-105
Identity = 162/163 (99.39%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 82
           PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT
Sbjct: 126 PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 185

Query: 83  DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 142
           DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVG VTG
Sbjct: 186 DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGLVTG 245

Query: 143 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 185
           TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER
Sbjct: 246 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 288

[Close]

BLAST of Csor.00g172970 vs. ExPASy TrEMBL
Match: F1SX50 (Silicon transporter 1 OS=Cucurbita moschata OX=3662 GN=CmLsi1(B+) PE=2 SV=1)

HSP 1 Score: 318 bits (815), Expect = 2.07e-107
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 82
           PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT
Sbjct: 126 PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 185

Query: 83  DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 142
           DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG
Sbjct: 186 DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 245

Query: 143 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 185
           TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER
Sbjct: 246 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 288

[Close]

BLAST of Csor.00g172970 vs. ExPASy TrEMBL
Match: A0A6J1I4A3 (aquaporin NIP2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111470516 PE=3 SV=1)

HSP 1 Score: 318 bits (815), Expect = 2.07e-107
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 82
           PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT
Sbjct: 126 PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 185

Query: 83  DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 142
           DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG
Sbjct: 186 DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 245

Query: 143 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 185
           TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER
Sbjct: 246 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 288

[Close]

BLAST of Csor.00g172970 vs. ExPASy TrEMBL
Match: Q7X9T0 (Nod26-like protein OS=Cucurbita pepo OX=3663 GN=NIP1 PE=2 SV=1)

HSP 1 Score: 318 bits (815), Expect = 2.07e-107
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 82
           PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT
Sbjct: 126 PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 185

Query: 83  DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 142
           DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG
Sbjct: 186 DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 245

Query: 143 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 185
           TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER
Sbjct: 246 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 288

[Close]

BLAST of Csor.00g172970 vs. ExPASy TrEMBL
Match: F1SX51 (Silicon transporter 1 OS=Cucurbita moschata OX=3662 GN=CmLsi1(B-) PE=2 SV=1)

HSP 1 Score: 314 bits (805), Expect = 6.88e-106
Identity = 162/163 (99.39%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 82
           PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT
Sbjct: 126 PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 185

Query: 83  DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 142
           DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVG VTG
Sbjct: 186 DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGLVTG 245

Query: 143 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 185
           TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER
Sbjct: 246 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGEGER 288

[Close]

BLAST of Csor.00g172970 vs. ExPASy TrEMBL
Match: A0A5D3DQ37 (Aquaporin NIP2-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008030 PE=3 SV=1)

HSP 1 Score: 298 bits (764), Expect = 1.14e-99
Identity = 153/160 (95.62%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 82
           PLY AAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVT AVAT
Sbjct: 125 PLYGAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTLAVAT 184

Query: 83  DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 142
           DTKAVGELAG+AVGSAVCITSILAGPVSGGSMNPVRTLGPA+ASDNYKGLWVYFVGPV G
Sbjct: 185 DTKAVGELAGMAVGSAVCITSILAGPVSGGSMNPVRTLGPALASDNYKGLWVYFVGPVVG 244

Query: 143 TLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVGE 182
           T LGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDV E
Sbjct: 245 TQLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRSDVSE 284

[Close]

BLAST of Csor.00g172970 vs. TAIR 10
Match: AT4G18910.1 (NOD26-like intrinsic protein 1;2 )

HSP 1 Score: 146.4 bits (368), Expect = 2.3e-35
Identity = 82/170 (48.24%), Postives = 107/170 (62.94%), Query Frame = 0


Query: 17  FRLTIPPLYAAAQLSGATCAAFTLRLLLHPIKHLGT--------TTPSGSDLQALVMEIV 76
           F L   P Y  +Q+ G+T AA TLRLL    + + +        T PSGS+LQ+ V+E +
Sbjct: 124 FPLKQVPAYVISQVIGSTLAAATLRLLFGLDQDVCSGKHDVFVGTLPSGSNLQSFVIEFI 183

Query: 77  VTFSMMFVTCAVATDTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDN 136
           +TF +MFV   VATD +A+GELAGLAVGS V +  I+AGPVSG SMNP R+LGPAM    
Sbjct: 184 ITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVIIAGPVSGASMNPGRSLGPAMVYSC 243

Query: 137 YKGLWVYFVGPVTGTLLGAWSYKFIRASDKPVHLISPHSFSLKLRRMSRS 179
           Y+GLW+Y V P+ G + GAW Y  +R +DKP+  I+     LK  R   S
Sbjct: 244 YRGLWIYIVSPIVGAVSGAWVYNMVRYTDKPLREITKSGSFLKTVRNGSS 293

[Close]

BLAST of Csor.00g172970 vs. TAIR 10
Match: AT4G10380.1 (NOD26-like intrinsic protein 5;1 )

HSP 1 Score: 142.5 bits (358), Expect = 3.4e-34
Identity = 72/135 (53.33%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVAT 82
           P Y AAQ+S + CA+F L+ + HP    G T PS S  QA  +E ++TF ++FV  AVAT
Sbjct: 156 PAYIAAQVSASICASFALKGVFHPFMSGGVTIPSVSLGQAFALEFIITFILLFVVTAVAT 215

Query: 83  DTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVTG 142
           DT+AVGELAG+AVG+ V +  ++AGP +GGSMNPVRTLGPA+AS NY+ LWVY V P  G
Sbjct: 216 DTRAVGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVASGNYRSLWVYLVAPTLG 275

Query: 143 TLLGAWSYKFIRASD 158
            + GA  Y  ++ +D
Sbjct: 276 AISGAAVYTGVKLND 290

[Close]

BLAST of Csor.00g172970 vs. TAIR 10
Match: AT4G19030.1 (NOD26-like major intrinsic protein 1 )

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33
Identity = 80/168 (47.62%), Postives = 106/168 (63.10%), Query Frame = 0


Query: 17  FRLTIPPLYAAAQLSGATCAAFTLRLLL---HPI---KH---LGTTTPSGSDLQALVMEI 76
           F L   P Y  +Q+ G+T AA TLRLL    H +   KH   +G ++P GSDLQA  ME 
Sbjct: 127 FPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIG-SSPVGSDLQAFTMEF 186

Query: 77  VVTFSMMFVTCAVATDTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASD 136
           +VTF +MF+   VATD +A+GELAGLA+GS V +  ++A PVS  SMNP R+LGPA+   
Sbjct: 187 IVTFYLMFIISGVATDNRAIGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPALVYG 246

Query: 137 NYKGLWVYFVGPVTGTLLGAWSYKFIRASDKPVHLISPHSFSLKLRRM 176
            YKG+W+Y V P  G + GAW Y  +R +DKP+  I+     LK  R+
Sbjct: 247 CYKGIWIYLVAPTLGAIAGAWVYNTVRYTDKPLREITKSGSFLKTVRI 293

[Close]

BLAST of Csor.00g172970 vs. TAIR 10
Match: AT5G37820.1 (NOD26-like intrinsic protein 4;2 )

HSP 1 Score: 139.0 bits (349), Expect = 3.7e-33
Identity = 72/150 (48.00%), Postives = 100/150 (66.67%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLLLHPI-KHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAVA 82
           PLY  AQL+G+  A+ TLRL+ +   K    TTP+ S  QALV EI+++F +MFV   VA
Sbjct: 121 PLYIGAQLTGSLLASLTLRLMFNVTPKAFFGTTPTDSSGQALVAEIIISFLLMFVISGVA 180

Query: 83  TDTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPVT 142
           TD++A GELAG+AVG  + +   +AGP+SG SMNP R+LGPA+    YKG+WVY VGP  
Sbjct: 181 TDSRATGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFV 240

Query: 143 GTLLGAWSYKFIRASDKPVHLISPHSFSLK 172
           G   G + Y F+R +DKP+  ++  +  L+
Sbjct: 241 GIFAGGFVYNFMRFTDKPLRELTKSASFLR 270

[Close]

BLAST of Csor.00g172970 vs. TAIR 10
Match: AT5G37810.1 (NOD26-like intrinsic protein 4;1 )

HSP 1 Score: 136.0 bits (341), Expect = 3.2e-32
Identity = 79/166 (47.59%), Postives = 105/166 (63.25%), Query Frame = 0


Query: 23  PLYAAAQLSGATCAAFTLRLL--LHPIKHLGTTTPSGSDLQALVMEIVVTFSMMFVTCAV 82
           PLY  AQ +G+  A+ TLRL+  + P    G TTP+ S  +ALV EI+++F +MFV   V
Sbjct: 121 PLYIGAQFAGSLLASLTLRLMFKVTPEAFFG-TTPADSPARALVAEIIISFLLMFVISGV 180

Query: 83  ATDTKAVGELAGLAVGSAVCITSILAGPVSGGSMNPVRTLGPAMASDNYKGLWVYFVGPV 142
           ATD +AVGELAG+AVG  + +   +AGP+SG SMNP R+LGPA+    YK +WVY VGPV
Sbjct: 181 ATDNRAVGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALVMGVYKHIWVYIVGPV 240

Query: 143 TGTLLGAWSYKFIRASDKPV-HLISPHSFSLKLRRMSRSDVGEGER 186
            G + G + Y  IR +DKP+  L    SF   LR +S S  G   +
Sbjct: 241 LGVISGGFVYNLIRFTDKPLRELTKSASF---LRAVSPSHKGSSSK 282

The following BLAST results are available for this feature:

BLAST of Csor.00g172970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ATN2	1.1e-50	67.32	Aquaporin NIP2-2 OS=Zea mays OX=4577 GN=NIP2-2 PE=2 SV=1	[more]
Q67WJ8	3.3e-50	64.24	Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-2 PE=1 SV=1	[more]
Q19KC1	5.6e-50	64.78	Aquaporin NIP2-1 OS=Zea mays OX=4577 GN=NIP2-1 PE=2 SV=2	[more]
Q6Z2T3	2.1e-49	64.05	Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=NIP2-1 PE=1 SV=1	[more]
Q9AT74	2.3e-48	65.81	Aquaporin NIP2-3 OS=Zea mays OX=4577 GN=NIP2-3 PE=2 SV=1	[more]

BLAST of Csor.00g172970 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588370.1	7.29e-126	100.00	Aquaporin NIP2-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023529347.1	4.29e-107	100.00	aquaporin NIP2-1-like [Cucurbita pepo subsp. pepo] >KAG7022218.1 Aquaporin NIP2-...	[more]
XP_022934019.1	4.29e-107	100.00	aquaporin NIP2-1-like [Cucurbita moschata] >BAK09175.1 silicon transporter 1 [Cu...	[more]
XP_022971831.1	4.29e-107	100.00	aquaporin NIP2-1-like [Cucurbita maxima]	[more]
BAK09176.1	1.42e-105	99.39	silicon transporter 1 [Cucurbita moschata]	[more]

BLAST of Csor.00g172970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
F1SX50	2.07e-107	100.00	Silicon transporter 1 OS=Cucurbita moschata OX=3662 GN=CmLsi1(B+) PE=2 SV=1	[more]
A0A6J1I4A3	2.07e-107	100.00	aquaporin NIP2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111470516 PE=3 SV=1	[more]
Q7X9T0	2.07e-107	100.00	Nod26-like protein OS=Cucurbita pepo OX=3663 GN=NIP1 PE=2 SV=1	[more]
F1SX51	6.88e-106	99.39	Silicon transporter 1 OS=Cucurbita moschata OX=3662 GN=CmLsi1(B-) PE=2 SV=1	[more]
A0A5D3DQ37	1.14e-99	95.63	Aquaporin NIP2-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35...	[more]

BLAST of Csor.00g172970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18910.1	2.3e-35	48.24	NOD26-like intrinsic protein 1;2	[more]
AT4G10380.1	3.4e-34	53.33	NOD26-like intrinsic protein 5;1	[more]
AT4G19030.1	1.7e-33	47.62	NOD26-like major intrinsic protein 1	[more]
AT5G37820.1	3.7e-33	48.00	NOD26-like intrinsic protein 4;2	[more]
AT5G37810.1	3.2e-32	47.59	NOD26-like intrinsic protein 4;1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000425	Major intrinsic protein	PRINTS	PR00783	MINTRINSICP	coord: 65..83 score: 27.19 coord: 96..118 score: 34.94 coord: 133..153 score: 36.26 coord: 21..40 score: 34.36
IPR000425	Major intrinsic protein	PFAM	PF00230	MIP	coord: 19..150 e-value: 2.9E-31 score: 109.0
IPR023271	Aquaporin-like	GENE3D	1.20.1080.10	Glycerol uptake facilitator protein.	coord: 15..160 e-value: 4.5E-37 score: 129.2
IPR023271	Aquaporin-like	SUPERFAMILY	81338	Aquaporin-like	coord: 18..163
None	No IPR available	PANTHER	PTHR45724:SF30	MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED	coord: 22..169
IPR034294	Aquaporin transporter	PANTHER	PTHR45724	AQUAPORIN NIP2-1	coord: 22..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g172970.m01	Csor.00g172970.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0015267	channel activity