Csor.00g172700 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g172700
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionMitochondrial transcription termination factor family protein
LocationCsor_Chr16: 3558548 .. 3559723 (+)
RNA-Seq ExpressionCsor.00g172700
SyntenyCsor.00g172700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGCGCTGAGATCATCGTTTTCTATTTCCTCTCGCCATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGGAGCCGCAGAGGCATTAAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATACGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAGGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGGTATGCAGCGATGTTGTGACAAGCTTTTGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGATATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAACTAATGCGACCTTCCAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGTCTATTGAAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGAGATAGAATTGTTGGCGGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGGAGTTGGAAACATGA

mRNA sequence

ATGTACGCGCTGAGATCATCGTTTTCTATTTCCTCTCGCCATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGGAGCCGCAGAGGCATTAAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATACGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAGGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGAGGCAACCTGCACTTTTTGTAGTGTAACTAATGCGACCTTCCAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGTCTATTGAAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGAGATAGAATTGTTGGCGGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGGAGTTGGAAACATGA

Coding sequence (CDS)

ATGTACGCGCTGAGATCATCGTTTTCTATTTCCTCTCGCCATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGGAGCCGCAGAGGCATTAAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATACGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAGGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGAGGCAACCTGCACTTTTTGTAGTGTAACTAATGCGACCTTCCAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGTCTATTGAAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGAGATAGAATTGTTGGCGGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGGAGTTGGAAACATGA

Protein sequence

MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQEATCTFCSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDKFVHRFPDHEIELLAAFRGQCMDELQPKELET
Homology
[Close]
BLAST of Csor.00g172700 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.2e-11
Identity = 50/219 (22.83%), Postives = 101/219 (46.12%), Query Frame = 0 

Query: 69  GIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSD 128
           G    E+ + + KY   LG  K  ++  + + P +   ++E+T+ PK+ F Q +G+    
Sbjct: 381 GCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEA 440

Query: 129 LGRFISKHSTLLTVSLEKKLMPSVEIL--KSVFPKDECNSDLLQEATCTFCSVTNATFQK 188
           +G  + K  +LLT SL KK+ P V  L  ++   + +    +  +     CS+     + 
Sbjct: 441 IGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSI-GTKLEP 500

Query: 189 KVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMH 248
            +    S GI   +   M    P+L+R +V  L+    +          D++  P    +
Sbjct: 501 NMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSY 560

Query: 249 AMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDF 286
           +++ R++PR+ ++  V+++   K    L  +L  +DE+F
Sbjct: 561 SLERRIIPRHTIM--VENRVNFK----LRYMLACTDEEF 592

[Close]
BLAST of Csor.00g172700 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.8e-09
Identity = 47/219 (21.46%), Postives = 95/219 (43.38%), Query Frame = 0 

Query: 69  GIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSD 128
           G++     + + +YL  LG  +      I   P I    ++ T+KP ++  Q+  +  + 
Sbjct: 280 GMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETS 339

Query: 129 LGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQEATCTFCSVTNATFQKKV 188
           L   I+++  ++ + L+ KL    ++L S    +  +   L E    F S++ +   K +
Sbjct: 340 LPSIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHI 399

Query: 189 ELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAM 248
           + +   G +  +   M    P ++  ++G +K   E+F  E +    D+V  P    + +
Sbjct: 400 DFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGL 459

Query: 249 QGRVLPRYRVLQVVKSKSLLKK--HPQLLDILGMSDEDF 286
           +  V PR+        K ++KK     L  +L  SDE F
Sbjct: 460 ESTVKPRH--------KKIIKKGIKCSLAWMLNCSDEKF 490

[Close]
BLAST of Csor.00g172700 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.8e-06
Identity = 44/172 (25.58%), Postives = 86/172 (50.00%), Query Frame = 0 

Query: 59  RAVSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEF 118
           RAVS + S    +   +PQ++  YL +LG +   I++  R      + +++  +KP +EF
Sbjct: 182 RAVSRV-SELDTEGALRPQTL--YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEF 241

Query: 119 FQNLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQEATCTFCS 178
             +LG+  SD+   + K   +  +SL   L P++  L+++      + +   +    F +
Sbjct: 242 LLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETL----GIDKNQWAKIISRFPA 301

Query: 179 VTNATFQK---KVELICSFGITEKECMRMFTSAPVLIRTSV-GKLKRGLEFF 227
           +   + QK    VE +   G+TE++  R+ T  P ++  SV  KL+  +E+F
Sbjct: 302 ILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYF 346

[Close]
BLAST of Csor.00g172700 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.0e-06
Identity = 44/199 (22.11%), Postives = 89/199 (44.72%), Query Frame = 0 

Query: 87  GFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVSLEK 146
           G +   +   + + P +  ++ ER L+P+IEF +  G     + +F+SK   +L +S E 
Sbjct: 298 GLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILALS-EN 357

Query: 147 KLMPSVEILKSVFPKDECNSDLLQEATCTFCSVTNATFQKKVELICSFGITEKECMRMFT 206
            L   +  L  +  K             T  S  N   Q+ + L  S+G++ ++ + M T
Sbjct: 358 NLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDN--MQRVIGLYLSYGLSFEDILAMST 417

Query: 207 SAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKS 266
             P +++ +   L+  LE+ +        +++  P  L + +  R+  RY   + +KS+ 
Sbjct: 418 KHPQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYE--EKLKSRG 477

Query: 267 LLKKHPQLLDILGMSDEDF 286
              ++  L  +L +S E F
Sbjct: 478 ---ENMSLNKLLTVSAERF 488

[Close]
BLAST of Csor.00g172700 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.2e-05
Identity = 51/248 (20.56%), Postives = 97/248 (39.11%), Query Frame = 0 

Query: 82  YLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLT 141
           YL  +G     I+  +   PQI    +E  LK  I F   LG+  S +G+ ++   +L +
Sbjct: 225 YLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFS 284

Query: 142 VSLEKKLMPSVEIL--------------------------------KSVF-------PKD 201
            S+E  L P++  L                                + +F       P+D
Sbjct: 285 YSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRD 344

Query: 202 ECNSDLLQEATCTFCSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSV-GKLKR 261
                + +       S+ +  F  ++  + S G+   + +++ TS   ++  S+   LK 
Sbjct: 345 SVVKMVKKHPQLLHYSIDDG-FLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKP 404

Query: 262 GLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMS 290
              + +NE       + + P  L  ++  R+ PR+R L  +K    ++K P  L  L  +
Sbjct: 405 KYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKK---VRKGPFPLSSLVPN 464

[Close]
BLAST of Csor.00g172700 vs. NCBI nr
Match: KAG6577263.1 (Transcription termination factor MTERF2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 627 bits (1616), Expect = 2.87e-226
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0 

Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQEATCTFCSVT 180
           NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQEATCTFCSVT
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQEATCTFCSVT 180

Query: 181 NATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRK 240
           NATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRK
Sbjct: 181 NATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRK 240

Query: 241 PTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDKFVHRFPDHEIEL 300
           PTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDKFVHRFPDHEIEL
Sbjct: 241 PTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDKFVHRFPDHEIEL 300

Query: 301 LAAFRGQCMDELQPKELET 319
           LAAFRGQCMDELQPKELET
Sbjct: 301 LAAFRGQCMDELQPKELET 319

[Close]
BLAST of Csor.00g172700 vs. NCBI nr
Match: KAG6577264.1 (Transcription termination factor MTERF15, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 588 bits (1515), Expect = 1.44e-210
Identity = 304/332 (91.57%), Postives = 312/332 (93.98%), Query Frame = 0 

Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           V IMRSRRG++STEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ
Sbjct: 61  VLIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQ---------- 180
           NLGLVGSDLGRFISKHSTLLT+SLEK+LMPSVEILKSVFPKDECNSDLLQ          
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTLSLEKRLMPSVEILKSVFPKDECNSDLLQLRDCWFSTLY 180

Query: 181 ---EATCTFCSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFM 240
              EAT TFCSV+NATF+KKVELICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFM
Sbjct: 181 VTEEATYTFCSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFM 240

Query: 241 NEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLD 300
           NEAEVSRSDIV KPTCLMHAMQGRVLPRYRVLQVVKSK LL+KHPQLLDILGMS+EDFLD
Sbjct: 241 NEAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSEEDFLD 300

Query: 301 KFVHRFPDHEIELLAAFRGQCMDELQPKELET 319
           KFVHRFPDH  ELLAAFRGQCMDELQPKELET
Sbjct: 301 KFVHRFPDHVTELLAAFRGQCMDELQPKELET 332

[Close]
BLAST of Csor.00g172700 vs. NCBI nr
Match: KAG7015351.1 (Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 572 bits (1473), Expect = 2.51e-203
Identity = 311/391 (79.54%), Postives = 312/391 (79.80%), Query Frame = 0 

Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQEA-------- 180
           NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQ          
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180

Query: 181 ---------------TC------------------------------------------- 240
                          +C                                           
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 ------TFCSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
                    SVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 319
           EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

[Close]
BLAST of Csor.00g172700 vs. NCBI nr
Match: XP_022929526.1 (uncharacterized protein LOC111436067 [Cucurbita moschata])

HSP 1 Score: 567 bits (1462), Expect = 1.19e-201
Identity = 307/391 (78.52%), Postives = 312/391 (79.80%), Query Frame = 0 

Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRGI+STEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQ--EATC---- 180
           N GLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQ  +  C    
Sbjct: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240

Query: 241 ------TFCSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
                    SVTNATF+KKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 319
           EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

[Close]
BLAST of Csor.00g172700 vs. NCBI nr
Match: XP_023552360.1 (uncharacterized protein LOC111810052 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552361.1 uncharacterized protein LOC111810052 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 556 bits (1434), Expect = 2.18e-197
Identity = 302/391 (77.24%), Postives = 309/391 (79.03%), Query Frame = 0 

Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSR+NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRGI+STEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQ--EATC---- 180
           NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEIL+SVFPKDECNSDLLQ  +  C    
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILQSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 RFPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 ------TFCSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
                    SVTNATF+KKVELICSFGITEKECMRMFTSAPVLIRTS GKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSGGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 319
           EAEVSRSDIVRKPTCLMHAM+GRVLPRYRVLQVVKSK LL KHPQL+DILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMEGRVLPRYRVLQVVKSKRLLMKHPQLIDILGMSDEDFLDK 360

[Close]
BLAST of Csor.00g172700 vs. ExPASy TrEMBL
Match: A0A6J1END2 (uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC111436067 PE=3 SV=1)

HSP 1 Score: 567 bits (1462), Expect = 5.75e-202
Identity = 307/391 (78.52%), Postives = 312/391 (79.80%), Query Frame = 0 

Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRGI+STEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQ--EATC---- 180
           N GLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQ  +  C    
Sbjct: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240

Query: 241 ------TFCSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
                    SVTNATF+KKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 319
           EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

[Close]
BLAST of Csor.00g172700 vs. ExPASy TrEMBL
Match: A0A6J1EN21 (uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC111435860 PE=4 SV=1)

HSP 1 Score: 556 bits (1433), Expect = 1.86e-197
Identity = 302/391 (77.24%), Postives = 310/391 (79.28%), Query Frame = 0 

Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIMRSRRG++STEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQEA-------- 180
           NLGLVGSDLGRFISKHSTLLTVSLEK+LMPSVEILKSVFPKDECNSDLLQ          
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180

Query: 181 ---------------TC------------------------------------------- 240
                          +C                                           
Sbjct: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 ------TFCSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
                 +  SV+NATF+KKVELICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 319
           EAEVSRSDIV KPTCLMHAMQGRVLPRYRVLQVVKSK LL+KHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360

[Close]
BLAST of Csor.00g172700 vs. ExPASy TrEMBL
Match: A0A6J1JB80 (uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 545 bits (1404), Expect = 3.89e-193
Identity = 296/391 (75.70%), Postives = 305/391 (78.01%), Query Frame = 0 

Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNP SLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIM SRRGI STEKPQSVYKYLSELGFS+AHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQEA-------- 180
           NLGLVGSDLGRFISKHSTLLT+SLEK+LMPSVEILKSVFPKDECNSDLLQ          
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLM 180

Query: 181 ---------------TC------------------------------------------- 240
                          +C                                           
Sbjct: 181 RSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRM 240

Query: 241 ------TFCSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
                    SV+NATF+KKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 319
           EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVV SK L KKH QL+DILGMSDE+FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

[Close]
BLAST of Csor.00g172700 vs. ExPASy TrEMBL
Match: A0A6J1J5Y4 (uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 530 bits (1365), Expect = 2.90e-187
Identity = 289/387 (74.68%), Postives = 298/387 (77.00%), Query Frame = 0 

Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNP SLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120
           VSIM SRRGI STEKPQSVYKYLSELGFS+AHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQEA-------- 180
           NLGLVGSDLG FISKHSTLLT+SLEK+LMPSVEILKSVFPKDECNSD LQ          
Sbjct: 121 NLGLVGSDLGWFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDFLQVMRRCSDMLK 180

Query: 181 ---------------TC------------------------------------------- 240
                          +C                                           
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 ------TFCSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
                    SV+NATF+KKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 315
           EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVV SK L KKH QL+DILGMSDE+FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

[Close]
BLAST of Csor.00g172700 vs. ExPASy TrEMBL
Match: A0A6J1C8W1 (uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008506 PE=3 SV=1)

HSP 1 Score: 406 bits (1043), Expect = 3.77e-138
Identity = 229/391 (58.57%), Postives = 272/391 (69.57%), Query Frame = 0 

Query: 1   MYALRSSFSISSRH-NPSSLLRIDP-LLYCFFSSSSHSQASASYGIVVQYLIDTFELSPA 60
           MYALRS FS+S+RH +P     IDP L Y F SSSS  +ASA+  IVVQYL+D F LS A
Sbjct: 1   MYALRSIFSLSARHCHP-----IDPPLCYFFSSSSSRREASAANAIVVQYLVDNFNLSTA 60

Query: 61  RAVSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEF 120
           RA++IM  R+G++STEKP+SV KYLSELGFS AHIQS IR++PQIAFS++E+TLKPKIEF
Sbjct: 61  RALAIMSCRKGVESTEKPRSVCKYLSELGFSDAHIQSAIRISPQIAFSSVEKTLKPKIEF 120

Query: 121 FQNLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQEA------ 180
           FQNLGLVGSDLG+FIS HS+LLTVSL+ KL PSVEILK+VFPKDE NS+LLQ        
Sbjct: 121 FQNLGLVGSDLGKFISNHSSLLTVSLKNKLRPSVEILKNVFPKDEDNSNLLQVMRRCSDI 180

Query: 181 -----------------TC----------------------------------------- 240
                            +C                                         
Sbjct: 181 LMRCPESRLLVNINYFRSCGIVDSQLSMLLKRQPVLFGRRESRVRDLVSMAVETGFSTNT 240

Query: 241 --------TFCSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFF 300
                      SV+NATF+KKVELICSFG TEKECM+MFTSAPVLIRTS+ KLK G+EFF
Sbjct: 241 KMFVHGLHAISSVSNATFKKKVELICSFGFTEKECMKMFTSAPVLIRTSIAKLKTGIEFF 300

Query: 301 MNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFL 317
           MNEA+VSRS IVR+PT LMH+MQGRVLPRYRVLQVVKSK L +K+P+L+D LG+S+EDF 
Sbjct: 301 MNEAKVSRSLIVRRPTSLMHSMQGRVLPRYRVLQVVKSKRLTRKNPELVDTLGISEEDFF 360

[Close]
BLAST of Csor.00g172700 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 159.8 bits (403), Expect = 3.5e-39
Identity = 114/365 (31.23%), Postives = 178/365 (48.77%), Query Frame = 0 

Query: 21  RIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGIKSTEKPQSVY 80
           R D  L     SS+ + AS S    V++L D     P  A++I      +KS E+P+SV 
Sbjct: 17  RWDRALSLHHFSSNATPASISNPAFVEFLRDNGFQKPL-AIAIAMRYPNLKSLEQPRSVI 76

Query: 81  KYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLL 140
           + L    FS   IQ +IR+ P++ F N+E+ L+PK+ FF+++G  GS LG+F+S++S+++
Sbjct: 77  QMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVV 136

Query: 141 TVSLEKKLMPSVEILKS-VFPKDE------------------------------------ 200
            VSL KKL+P+VEILKS V PK E                                    
Sbjct: 137 GVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVG 196

Query: 201 ----------------------------------CNSDLLQEATCTFCSVTNATFQKKVE 260
                                              NS +L  A  +  S++  TF +KV+
Sbjct: 197 SQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVK 256

Query: 261 LICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQ 310
           L  + G +E E   +   +P LIR S  KL  G EF++    + R  + ++P  L + ++
Sbjct: 257 LFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLE 316

[Close]
BLAST of Csor.00g172700 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 95.9 bits (237), Expect = 6.2e-20
Identity = 85/344 (24.71%), Postives = 144/344 (41.86%), Query Frame = 0 

Query: 31  SSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGIKSTEKPQSVYKYLSELGFSK 90
           S +   Q        V YL+D+  LS   A S  R  + + S++KP SV     + GF+ 
Sbjct: 44  SENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVK-LVSSKKPDSVLALFKDHGFTN 103

Query: 91  AHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVSLEKKLMP 150
             I S I+  P++   + E  + PK+ FF ++G   SD  + IS    +L+ SL K+L+P
Sbjct: 104 DQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIP 163

Query: 151 SVEILKSVFPKDE-------------------CNS-----------------DLLQEATC 210
             + LKS+  ++E                   C S                  L+Q +  
Sbjct: 164 CYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPF 223

Query: 211 TF--------------CS-------------------VTNATFQKKVELICSFGITEKEC 270
           TF              CS                    + +  ++K +L   FG ++++ 
Sbjct: 224 TFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDF 283

Query: 271 MRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQV 305
           +      P  +  S  K+   LE+ +N   +   DIV +P  L  +M+ R+ PR +V+ +
Sbjct: 284 VAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISL 343

[Close]
BLAST of Csor.00g172700 vs. TAIR 10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 70.1 bits (170), Expect = 3.7e-12
Identity = 50/219 (22.83%), Postives = 101/219 (46.12%), Query Frame = 0 

Query: 69  GIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSD 128
           G    E+ + + KY   LG  K  ++  + + P +   ++E+T+ PK+ F Q +G+    
Sbjct: 381 GCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEA 440

Query: 129 LGRFISKHSTLLTVSLEKKLMPSVEIL--KSVFPKDECNSDLLQEATCTFCSVTNATFQK 188
           +G  + K  +LLT SL KK+ P V  L  ++   + +    +  +     CS+     + 
Sbjct: 441 IGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSI-GTKLEP 500

Query: 189 KVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMH 248
            +    S GI   +   M    P+L+R +V  L+    +          D++  P    +
Sbjct: 501 NMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSY 560

Query: 249 AMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDF 286
           +++ R++PR+ ++  V+++   K    L  +L  +DE+F
Sbjct: 561 SLERRIIPRHTIM--VENRVNFK----LRYMLACTDEEF 592

[Close]
BLAST of Csor.00g172700 vs. TAIR 10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 69.3 bits (168), Expect = 6.3e-12
Identity = 65/280 (23.21%), Postives = 119/280 (42.50%), Query Frame = 0 

Query: 31  SSSSHSQASASYGIVVQYLIDTFELS-PARAV--SIMRSRRGIKSTEKPQSVYKYLSELG 90
           +SSS+     S G  ++ +    EL  P+R +   ++   + +   E   +  K + E+G
Sbjct: 168 TSSSYELPQGSQGNKIRNVSALRELGMPSRLLLPLLVSKSQPVCGKENFDASLKKVVEMG 227

Query: 91  FSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVSLEKK 150
           F      +   LA ++ +   E+T++ K+  F++LG    D+     K  ++L VS +K 
Sbjct: 228 FDPT--TTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKI 287

Query: 151 LMPSVEILKSVFPKDECNSDLLQEATCTFCSVTNATFQKKVELICSFGITEKECMRMFTS 210
           L                                     K  E     G +  E + M   
Sbjct: 288 L-------------------------------------KSAETFLDLGYSRAEFLMMVKR 347

Query: 211 APVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSL 270
            P  I  SV  +K+  EF + + +  R+ +V  P    ++M+ R++PR  +L+ + SK L
Sbjct: 348 YPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGL 407

Query: 271 LKKH---PQLLDILGMSDEDFLDKFVHRFPDHEIELLAAF 305
           L+K    P +  +L  +DE FLD++V +  +    L+A F
Sbjct: 408 LRKGSELPAVSSVLSCTDEGFLDRYVMKHNELVPTLMAIF 408

[Close]
BLAST of Csor.00g172700 vs. TAIR 10
Match: AT1G62120.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-10
Identity = 81/388 (20.88%), Postives = 135/388 (34.79%), Query Frame = 0 

Query: 30  FSSS------SHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGIKSTEKPQSVYKYL 89
           FSSS      S       +   V YL+D+  L+   A SI   +    +   P SV   L
Sbjct: 37  FSSSAIAADVSSRDGRKGHNFTVSYLVDSLGLATKVAESI-SMKVSFDNKGNPDSVLSLL 96

Query: 90  SELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDL-------------- 149
              GF+ + I + IR  P++   + E++L PK++F Q++G   S+L              
Sbjct: 97  RSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKR 156

Query: 150 -GRFISKHSTLLTVSLEKKLMPSVEILKSVFPK--------------------------- 209
            G+ +S++   + V +E      +E L    P+                           
Sbjct: 157 KGKSLSRYYDFVKVIIEADKSSKLEKLCHSLPEGSKQENKIRNLLVLREMGVPQRLLFSL 216

Query: 210 ------DECNSDLLQEA------------TCTFCSVTNATF------------------- 269
                 D C  +  +E+            T TF    N  +                   
Sbjct: 217 LISDAGDVCGKEKFKESLKKAVEIGFDPTTATFVKALNVLYGLSDKGIENKFNACKRLGL 276

Query: 270 -----------------------QKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKR 307
                                  +  VE     G +  E + M    P  I  S   +K 
Sbjct: 277 AVDDVWAMFKKWPNILTKSEKKIENSVETFLGLGFSRDEFLMMVKRFPQCIGYSTELMKT 336

The following BLAST results are available for this feature:
BLAST of Csor.00g172700 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4IHL35.2e-1122.83Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... [more]
Q9ZT964.8e-0921.46Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O... [more]
F4JVI33.8e-0625.58Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... [more]
Q9FK235.0e-0622.11Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O... [more]
Q9FM803.2e-0520.56Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O... [more]
BLAST of Csor.00g172700 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6577263.12.87e-226100.00Transcription termination factor MTERF2, chloroplastic, partial [Cucurbita argyr... [more]
KAG6577264.11.44e-21091.57Transcription termination factor MTERF15, mitochondrial, partial [Cucurbita argy... [more]
KAG7015351.12.51e-20379.54Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyr... [more]
XP_022929526.11.19e-20178.52uncharacterized protein LOC111436067 [Cucurbita moschata][more]
XP_023552360.12.18e-19777.24uncharacterized protein LOC111810052 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
BLAST of Csor.00g172700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1END25.75e-20278.52uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC1114360... [more]
A0A6J1EN211.86e-19777.24uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC1114358... [more]
A0A6J1JB803.89e-19375.70uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1J5Y42.90e-18774.68uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1C8W13.77e-13858.57uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 G... [more]
BLAST of Csor.00g172700 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G64950.13.5e-3931.23Mitochondrial transcription termination factor family protein [more]
AT1G21150.16.2e-2024.71Mitochondrial transcription termination factor family protein [more]
AT2G21710.13.7e-1222.83Mitochondrial transcription termination factor family protein [more]
AT1G61990.16.3e-1223.21Mitochondrial transcription termination factor family protein [more]
AT1G62120.12.0e-1020.88Mitochondrial transcription termination factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 130..162
e-value: 4.7
score: 16.2
coord: 234..265
e-value: 590.0
score: 5.7
coord: 202..233
e-value: 9.4
score: 15.2
coord: 94..125
e-value: 0.65
score: 19.0
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 177..286
e-value: 8.5E-16
score: 57.8
coord: 81..160
e-value: 4.1E-11
score: 42.4
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 31..162
coord: 164..306
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 46..296
e-value: 8.7E-50
score: 171.3
NoneNo IPR availablePANTHERPTHR13068:SF173EMB|CAB62602.1coord: 31..162
coord: 164..306

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g172700.m01Csor.00g172700.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006353 DNA-templated transcription, termination
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003690 double-stranded DNA binding