Csor.00g172570 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g172570
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	sigma intracellular receptor 2-like
Location	Csor_Chr16: 3482058 .. 3483635 (-)
RNA-Seq Expression	Csor.00g172570
Synteny	Csor.00g172570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTCGTTCTTTGTACATGCCATGGCGCCGCCGCTCATCAGCGCCCAGTTATTGCTCCCCGGAGCCCTTTTCCCCGATGTTCTTATTGATTTCAAGGAGATGTACATTCGGCTGTCGGGAGACTATCTGATGGCGGAGACGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACCGTTTTCAACCTCTACGCCATCTGGGCTGCGAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTTTTCTCTGCTATGGTATTCTACTTTTCTCCTAAGATCGATTGTTGTTCAAAGCTTTACCAATAGATACTGGTCTTCACTTCACTGGCTTTCTCTTTCGAGTTTTCTGTCAAAGCTTTTAAAACATGTCGGTTAAGGAGAGGTTTTCACACCAATATAAAAAATGTTTCGGTTCTCCTCTCTGATCGATGTGGGATCTTACAATCCACCCCTTTTGAGACCCAGCGTCCTTGCTACCACACCTCCTGTGTGTCTCGCTCTAATACCTTTTATAATTACTTAATCTCTTTCGGCTTTCACTTTTGGGCTTCCCCTCAAAAATTTTAAAACGTGTTTGCTAGAAAAAGTTTTCCACACCCTTATAAAGAAATGATTCGTTTTCTTCTTCAATTGATGTGAGATCTCATAATTCACCCCTCCAAGGCAAGGAGATCTCATAATTCACCCCTTTAAGGCCTCTCATCCTAACATATTGGCTCAGATACCATTTGTAATTATTAAGTCTGACGTTACTAGATATTATTCTCTTTGACTTTTTCCCCTGGGGTTTCCTCTCAAGATTTTTGTATGCTTCATTCTTTCTCTAATCAATGTGAGATCTCACAATCCACCCCGTTCGAGGCCTAGCGTCTTCACTAGTACACCGTCCAGTGTCTGGCTCTAATACCATTTGTAATTACCCAAACGCTTCGTTCTTTCTCCAATCAATGTGAGATCTCACAATCCACCCTGTTCGAAGCCTAGCGTCTTCGCTAGTACACCGCCCAGTGTCAGCTCTAATACCATTTGTAATTACCCAAACCAATCATTGGCAAATATTGTCCTCTTTGAGCTTTCTCTTTTGGGTTTCCCCAAAGTTTTTAAAACACGTTTGTTTGGGGGAGGTTTGCATATCTTTATAAAAAAAATGTTTCGTTCTCCTCTCCAATTGATATATGATCTCACATCGATTGGAGAGAAAAATGAGTGTCAGCAAAACACTAGGCCCCGAAGGCAGTGTATTGTGAGATTCCATATCGGTTGGAGTGAGACGAAATATCTAACAAAGGAAGTAAATGAACAAGCTTTTGTTGGTTCTTTTTTCAGGCGGCCATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGAGTACTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTGGCCACGCTACGTGGGCTGATGCCGCGCTGCAGCAAGGCTACGGCCACCGGCGACAGCGTTGGACCATCAATTGCCGGCAAAAAGAAGGTTTGA

mRNA sequence

ATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTCGTTCTTTGTACATGCCATGGCGCCGCCGCTCATCAGCGCCCAGTTATTGCTCCCCGGAGCCCTTTTCCCCGATGTTCTTATTGATTTCAAGGAGATGTACATTCGGCTGTCGGGAGACTATCTGATGGCGGAGACGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACCGTTTTCAACCTCTACGCCATCTGGGCTGCGAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTTTTCTCTGCTATGGCGGCCATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGAGTACTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTGGCCACGCTACGTGGGCTGATGCCGCGCTGCAGCAAGGCTACGGCCACCGGCGACAGCGTTGGACCATCAATTGCCGGCAAAAAGAAGGTTTGA

Coding sequence (CDS)

ATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTCGTTCTTTGTACATGCCATGGCGCCGCCGCTCATCAGCGCCCAGTTATTGCTCCCCGGAGCCCTTTTCCCCGATGTTCTTATTGATTTCAAGGAGATGTACATTCGGCTGTCGGGAGACTATCTGATGGCGGAGACGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACCGTTTTCAACCTCTACGCCATCTGGGCTGCGAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTTTTCTCTGCTATGGCGGCCATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGAGTACTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTGGCCACGCTACGTGGGCTGATGCCGCGCTGCAGCAAGGCTACGGCCACCGGCGACAGCGTTGGACCATCAATTGCCGGCAAAAAGAAGGTTTGA

Protein sequence

MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAETPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQRASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDSVGPSIAGKKKV

Homology

[Close]

BLAST of Csor.00g172570 vs. ExPASy Swiss-Prot
Match: Q6DFQ5 (Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.1e-07
Identity = 41/154 (26.62%), Postives = 70/154 (45.45%), Query Frame = 0


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           M V  +L + + F  FF H     L+  Q +LP +L+P  L+D  + Y     D+LMA  
Sbjct: 1   MAVCARLLEWIFFFYFFSHIPITLLVDLQAVLPPSLYPQELLDLMKWYTVAFKDHLMANP 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIW-AAKSWLHTTCLIYGVSLFSAMAAIAAELIG-- 120
           PP+F   ++ E +LQ P      YA +     W+    ++Y   + + + AI   ++   
Sbjct: 61  PPWFKSFVYCEAILQLPFFPVAAYAFFKGGCKWIRIPAIVYSAHVATTVIAIIGHILFGE 120

Query: 121 ----------SQRASGVLLKLYLPFLGLGVLATL 142
                     +Q+    L+ +Y P+L + VL  L
Sbjct: 121 FPKSDVIAPLTQKDRLTLVSIYAPYLLVPVLLLL 154

[Close]

BLAST of Csor.00g172570 vs. NCBI nr
Match: KAG6577250.1 (Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015340.1 Transmembrane protein 97, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324 bits (830), Expect = 1.76e-111
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET
Sbjct: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDSVGPSIAGKKKV 168
           ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDSVGPSIAGKKKV
Sbjct: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDSVGPSIAGKKKV 168

[Close]

BLAST of Csor.00g172570 vs. NCBI nr
Match: XP_023553153.1 (sigma intracellular receptor 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321 bits (823), Expect = 2.06e-110
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MGVLLKLFDSVLFVSFFVHAMAPPLI AQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET
Sbjct: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDSVGPSIAGKKKV 168
           ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGD+VGPSIAGKKKV
Sbjct: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDTVGPSIAGKKKV 168

[Close]

BLAST of Csor.00g172570 vs. NCBI nr
Match: XP_022985078.1 (sigma intracellular receptor 2-like [Cucurbita maxima])

HSP 1 Score: 305 bits (781), Expect = 5.22e-104
Identity = 155/168 (92.26%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MGVLLKLFDSVLFVS FVHAMAPPLI AQLLLPGALFPDVL+DFKE+Y+RLSGDYLMAE 
Sbjct: 1   MGVLLKLFDSVLFVSLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLF+AM AIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFTAMVAIAAELIGSQR 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDSVGPSIAGKKKV 168
           ASG+LLKLYLPFLGLGVLATLRGL+PRCSKAT TG  VGPSIAGKKKV
Sbjct: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV 168

[Close]

BLAST of Csor.00g172570 vs. NCBI nr
Match: XP_022929300.1 (sigma intracellular receptor 2-like [Cucurbita moschata])

HSP 1 Score: 304 bits (778), Expect = 1.50e-103
Identity = 155/168 (92.26%), Postives = 160/168 (95.24%), Query Frame = 0


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MGVLLKLFDSVLFV  FVHAMAPPLI AQLLLPGALFPDVL+DFKE+Y+RLSGDYLMAE 
Sbjct: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAM AIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDSVGPSIAGKKKV 168
           ASG+LLKLYLPFLGLGVLATLRGL+PRCSKAT TG  VGPSIAGKKKV
Sbjct: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV 168

[Close]

BLAST of Csor.00g172570 vs. NCBI nr
Match: XP_038876784.1 (sigma intracellular receptor 2-like [Benincasa hispida])

HSP 1 Score: 268 bits (686), Expect = 1.58e-89
Identity = 137/167 (82.04%), Postives = 147/167 (88.02%), Query Frame = 0


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG LLKLFDS+LFVSF VHA+APPLI AQLLLP  LFPD+LI FK +YI  SGDYLMAE 
Sbjct: 1   MGALLKLFDSILFVSFLVHALAPPLIGAQLLLPQTLFPDLLIHFKNLYITQSGDYLMAEA 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFF+GLLWLELLLQWPLT+ NLYAI AAK WLHTTCLIYGVSLFSAMAAIAAEL+GSQ+
Sbjct: 61  PPFFIGLLWLELLLQWPLTLLNLYAISAAKPWLHTTCLIYGVSLFSAMAAIAAELLGSQK 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDSVGPSIAGKKK 167
           ASG+LL +YLPFLGLGV ATLRGLMPRCSKATA G   GPSIA KKK
Sbjct: 121 ASGILLNMYLPFLGLGVFATLRGLMPRCSKATAIGHGAGPSIATKKK 167

[Close]

BLAST of Csor.00g172570 vs. ExPASy TrEMBL
Match: A0A6J1JCI5 (sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111483157 PE=4 SV=1)

HSP 1 Score: 305 bits (781), Expect = 2.53e-104
Identity = 155/168 (92.26%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MGVLLKLFDSVLFVS FVHAMAPPLI AQLLLPGALFPDVL+DFKE+Y+RLSGDYLMAE 
Sbjct: 1   MGVLLKLFDSVLFVSLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLF+AM AIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFTAMVAIAAELIGSQR 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDSVGPSIAGKKKV 168
           ASG+LLKLYLPFLGLGVLATLRGL+PRCSKAT TG  VGPSIAGKKKV
Sbjct: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV 168

[Close]

BLAST of Csor.00g172570 vs. ExPASy TrEMBL
Match: A0A6J1EU13 (sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111435922 PE=4 SV=1)

HSP 1 Score: 304 bits (778), Expect = 7.24e-104
Identity = 155/168 (92.26%), Postives = 160/168 (95.24%), Query Frame = 0


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MGVLLKLFDSVLFV  FVHAMAPPLI AQLLLPGALFPDVL+DFKE+Y+RLSGDYLMAE 
Sbjct: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAM AIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDSVGPSIAGKKKV 168
           ASG+LLKLYLPFLGLGVLATLRGL+PRCSKAT TG  VGPSIAGKKKV
Sbjct: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV 168

[Close]

BLAST of Csor.00g172570 vs. ExPASy TrEMBL
Match: A0A0A0KZE5 (EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G038780 PE=4 SV=1)

HSP 1 Score: 252 bits (644), Expect = 1.91e-83
Identity = 130/167 (77.84%), Postives = 142/167 (85.03%), Query Frame = 0


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG +LKLFDSVLFV F VHA+APPLISAQLLLP  LFP++ I  K  YI  SGDYLMA+ 
Sbjct: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDSVGPSIAGKKK 167
           ASG+LL +Y PFL +GVLA LRGL+PRC+KAT TG   GPSIA KKK
Sbjct: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 167

[Close]

BLAST of Csor.00g172570 vs. ExPASy TrEMBL
Match: A0A5D3CY30 (Transmembrane protein 97-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005410 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 7.76e-83
Identity = 131/167 (78.44%), Postives = 139/167 (83.23%), Query Frame = 0


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG  LKLF+SVLFV F VHA+APPLI AQLLLP  LFPD+LI FK  YI  SGDYLMAE 
Sbjct: 1   MGSALKLFNSVLFVFFLVHALAPPLIGAQLLLPQTLFPDILIHFKNQYITHSGDYLMAEP 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFF+GLLWLELLLQWPLT+ NLYAI  AKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDSVGPSIAGKKK 167
           ASG+LL +Y PFL LGV A LRGL+P C KAT TG   GPSIA KKK
Sbjct: 121 ASGILLTIYSPFLVLGVFAMLRGLLPHCRKATTTGHGAGPSIATKKK 167

[Close]

BLAST of Csor.00g172570 vs. ExPASy TrEMBL
Match: A0A1S3BWY8 (transmembrane protein 97-like OS=Cucumis melo OX=3656 GN=LOC103494373 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 7.76e-83
Identity = 131/167 (78.44%), Postives = 139/167 (83.23%), Query Frame = 0


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG  LKLF+SVLFV F VHA+APPLI AQLLLP  LFPD+LI FK  YI  SGDYLMAE 
Sbjct: 1   MGSALKLFNSVLFVFFLVHALAPPLIGAQLLLPQTLFPDILIHFKNQYITHSGDYLMAEP 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFF+GLLWLELLLQWPLT+ NLYAI  AKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDSVGPSIAGKKK 167
           ASG+LL +Y PFL LGV A LRGL+P C KAT TG   GPSIA KKK
Sbjct: 121 ASGILLTIYSPFLVLGVFAMLRGLLPHCRKATTTGHGAGPSIATKKK 167

[Close]

BLAST of Csor.00g172570 vs. TAIR 10
Match: AT2G32380.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 151.8 bits (382), Expect = 5.1e-37
Identity = 83/169 (49.11%), Postives = 115/169 (68.05%), Query Frame = 0


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG   KL D+VLF+ F + A+  PLI  Q  LPG +FP  ++D    YI   GDYL+ E 
Sbjct: 1   MGAFCKLIDAVLFLYFALMAVIAPLIDGQTSLPGDIFPAFIVDLNRWYIDEFGDYLVKEK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P F VGL+W ELLL WPL++ N+YAI A KSW  TT ++YG S+ ++MAAI  E+IGS +
Sbjct: 61  PHFLVGLVWHELLLLWPLSIVNVYAILAGKSWFGTTSMVYGASVVTSMAAILGEMIGSGK 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDSVG--PSIAGKKK 168
           AS  LL +Y+PF+G+G+LA LRGL+   S++  +G +VG  P+I  ++K
Sbjct: 121 ASEKLLMMYVPFMGVGILALLRGLL---SQSNKSGGAVGKRPAILARRK 166

[Close]

BLAST of Csor.00g172570 vs. TAIR 10
Match: AT1G05210.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 149.8 bits (377), Expect = 1.9e-36
Identity = 81/154 (52.60%), Postives = 102/154 (66.23%), Query Frame = 0


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG L KL D  LFV F   A+  PLI  Q  LP  ++P  L D K  YI   GDYL+ E 
Sbjct: 1   MGALGKLIDVALFVYFVSMAIIAPLIDGQTSLPSGIYPAFLTDLKSKYIADFGDYLLMEK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P F VGL+W ELL  WPL++ N+YAI A KSW  TTCL+YG SL ++MAAI  ++IGS +
Sbjct: 61  PHFLVGLVWHELLFLWPLSIANVYAILAGKSWFGTTCLLYGASLVTSMAAILGDMIGSGK 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATAT 155
           AS  LL +Y+PF+G G+LA LRGL+ R +K T +
Sbjct: 121 ASDRLLMMYVPFMGFGILAVLRGLVYRSTKNTGS 154

[Close]

BLAST of Csor.00g172570 vs. TAIR 10
Match: AT1G05220.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 125.9 bits (315), Expect = 3.0e-29
Identity = 71/154 (46.10%), Postives = 100/154 (64.94%), Query Frame = 0


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG L KL +  LF  F + A+  PL++ Q+L PG ++P +L D K+ Y     DYL  E 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFPG-IYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FFVGL+W E++   PL++ N+YAI  +KSW  TT L+YG S  ++MAAI  ++IGS++
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATAT 155
            +  LL  YLPF+GL +LA LRGL+  CS   +T
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLV-TCSTKRST 152

[Close]

BLAST of Csor.00g172570 vs. TAIR 10
Match: AT1G05220.2 (Transmembrane protein 97, predicted )

HSP 1 Score: 125.9 bits (315), Expect = 3.0e-29
Identity = 71/154 (46.10%), Postives = 100/154 (64.94%), Query Frame = 0


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLISAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG L KL +  LF  F + A+  PL++ Q+L PG ++P +L D K+ Y     DYL  E 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFPG-IYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FFVGL+W E++   PL++ N+YAI  +KSW  TT L+YG S  ++MAAI  ++IGS++
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATAT 155
            +  LL  YLPF+GL +LA LRGL+  CS   +T
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLV-TCSTKRST 152

The following BLAST results are available for this feature:

BLAST of Csor.00g172570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DFQ5	4.1e-07	26.62	Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1	[more]

BLAST of Csor.00g172570 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577250.1	1.76e-111	100.00	Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia] ...	[more]
XP_023553153.1	2.06e-110	98.81	sigma intracellular receptor 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022985078.1	5.22e-104	92.26	sigma intracellular receptor 2-like [Cucurbita maxima]	[more]
XP_022929300.1	1.50e-103	92.26	sigma intracellular receptor 2-like [Cucurbita moschata]	[more]
XP_038876784.1	1.58e-89	82.04	sigma intracellular receptor 2-like [Benincasa hispida]	[more]

BLAST of Csor.00g172570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JCI5	2.53e-104	92.26	sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111483157 ...	[more]
A0A6J1EU13	7.24e-104	92.26	sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC11143592...	[more]
A0A0A0KZE5	1.91e-83	77.84	EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G038780 PE=4...	[more]
A0A5D3CY30	7.76e-83	78.44	Transmembrane protein 97-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BWY8	7.76e-83	78.44	transmembrane protein 97-like OS=Cucumis melo OX=3656 GN=LOC103494373 PE=4 SV=1	[more]

BLAST of Csor.00g172570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32380.1	5.1e-37	49.11	Transmembrane protein 97, predicted	[more]
AT1G05210.1	1.9e-36	52.60	Transmembrane protein 97, predicted	[more]
AT1G05220.1	3.0e-29	46.10	Transmembrane protein 97, predicted	[more]
AT1G05220.2	3.0e-29	46.10	Transmembrane protein 97, predicted	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016964	Sigma intracellular receptor 2	PIRSF	PIRSF031032	TMP_97	coord: 1..156 e-value: 6.1E-27 score: 91.5
None	No IPR available	PFAM	PF05241	EBP	coord: 43..140 e-value: 3.1E-13 score: 50.1
None	No IPR available	PANTHER	PTHR31204:SF6	SUBFAMILY NOT NAMED	coord: 1..167
None	No IPR available	PANTHER	PTHR31204	SIGMA INTRACELLULAR RECEPTOR 2	coord: 1..167
IPR033118	EXPERA domain	PROSITE	PS51751	EXPERA	coord: 8..140 score: 14.374351

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g172570.m01	Csor.00g172570.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane