Csor.00g171710 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g171710
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr19: 11126833 .. 11127755 (+)
RNA-Seq ExpressionCsor.00g171710
SyntenyCsor.00g171710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCAAAGACCCGAGGAGGCCGCCAACCACGGTGCACTGAGGAAGAAGTTTTGGCCTTCAAGCAAGAACGGGCCCCGACGGTCGTGTGAGGCGTGTAGCCGGACGGTTCGAGAGTCACTTTCCCGTGTCGGGTGTCATATGCTATGTAAGCGTGACGAGGAGGCTACTCGATGACATACCTCTTGAGACCCGCCAGCCACTCAGCCCTGAGGCCTGGCTCCTGTCACTTGGACAACGAGGGTACTCCCCTAGGGTTCTTCAGAACTTGTTGATACTGATGATTCTTCGGTGGTTTGAATGCTTCGTGCCTAATTTGGATGATGACAACTGTTTTCTTGCGCTCAAGGCAGGGGGGGGGGGGGTAAAATCGTGTTGCTGAGACACCCAAGCGTGGATCGCCGTACGCACGTGGAGTAGTGTTCCATGCCGGGTCTCTCGGTGCATACTTTCCATGATGGCACAATGTCTTCCTGTTGCTTTCTCTCTTCGTTTTTCTAGCAATTTTTTTTGTTGGGTTTTACGATTGAGAGTTTTGATGTGAATGTGGTTTTGAAGATATCATTTCTTCCACAGTAGATTGCTTTTTGCGAAGTAACCATTTTATGGAACACATCAGGACATATCTTTGTAACAAGTTTAATCCACTCACTATTGCAGAAGTACTCCAATTTTTTTTTGTAGCCTGTAGCAGCGAATTGCATTAGTACCCCCAGGCGTTCGTCTGGATACTCTGCTGCCCTCCGATGATAATCATGACGTTACAATGGTTGCAACAGCCATTTTCAATGCACTTTTCGTAGCCTTGCTGATCAGACTCGGGGAGGGAGCTCAAAACTCCCTACGGCTGATTCGGTCTGCTTTGAAGAGAGAACCCGACCCGGAACAACCATGCCTACTAAACTCTGACAGTTTTTCATGA

mRNA sequence

ATGGCTCCAAAGACCCGAGGAGGCCGCCAACCACGGTGCACTGAGGAAGAAGTTTTGGCCTTCAAGCAAGAACGGGCCCCGACGGTCGTCGTGACGAGGAGGCTACTCGATGACATACCTCTTGAGACCCGCCAGCCACTCAGCCCTGAGGCCTGGCTCCTGTCACTTGGACAACGAGGGTACTCCCCTAGGGTTCTTCAGAACTTGTTGATACTGATGATTCTTCGGTGGTTTGAATGCTTCGTGCCTAATTTGGATGATGACAACTGTTTTCTTGCGCTCAAGGCAGGGGGGGGGGGGCAGCGAATTGCATTAGTACCCCCAGGCGTTCGTCTGGATACTCTGCTGCCCTCCGATGATAATCATGACGTTACAATGGTTGCAACAGCCATTTTCAATGCACTTTTCGTAGCCTTGCTGATCAGACTCGGGGAGGGAGCTCAAAACTCCCTACGGCTGATTCGGTCTGCTTTGAAGAGAGAACCCGACCCGGAACAACCATGCCTACTAAACTCTGACAGTTTTTCATGA

Coding sequence (CDS)

ATGGCTCCAAAGACCCGAGGAGGCCGCCAACCACGGTGCACTGAGGAAGAAGTTTTGGCCTTCAAGCAAGAACGGGCCCCGACGGTCGTCGTGACGAGGAGGCTACTCGATGACATACCTCTTGAGACCCGCCAGCCACTCAGCCCTGAGGCCTGGCTCCTGTCACTTGGACAACGAGGGTACTCCCCTAGGGTTCTTCAGAACTTGTTGATACTGATGATTCTTCGGTGGTTTGAATGCTTCGTGCCTAATTTGGATGATGACAACTGTTTTCTTGCGCTCAAGGCAGGGGGGGGGGGGCAGCGAATTGCATTAGTACCCCCAGGCGTTCGTCTGGATACTCTGCTGCCCTCCGATGATAATCATGACGTTACAATGGTTGCAACAGCCATTTTCAATGCACTTTTCGTAGCCTTGCTGATCAGACTCGGGGAGGGAGCTCAAAACTCCCTACGGCTGATTCGGTCTGCTTTGAAGAGAGAACCCGACCCGGAACAACCATGCCTACTAAACTCTGACAGTTTTTCATGA

Protein sequence

MAPKTRGGRQPRCTEEEVLAFKQERAPTVVVTRRLLDDIPLETRQPLSPEAWLLSLGQRGYSPRVLQNLLILMILRWFECFVPNLDDDNCFLALKAGGGGQRIALVPPGVRLDTLLPSDDNHDVTMVATAIFNALFVALLIRLGEGAQNSLRLIRSALKREPDPEQPCLLNSDSFS
Homology
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BLAST of Csor.00g171710 vs. NCBI nr
Match: KAG6572445.1 (hypothetical protein SDJN03_29173, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355 bits (911), Expect = 1.44e-123
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 

Query: 1   MAPKTRGGRQPRCTEEEVLAFKQERAPTVVVTRRLLDDIPLETRQPLSPEAWLLSLGQRG 60
           MAPKTRGGRQPRCTEEEVLAFKQERAPTVVVTRRLLDDIPLETRQPLSPEAWLLSLGQRG
Sbjct: 1   MAPKTRGGRQPRCTEEEVLAFKQERAPTVVVTRRLLDDIPLETRQPLSPEAWLLSLGQRG 60

Query: 61  YSPRVLQNLLILMILRWFECFVPNLDDDNCFLALKAGGGGQRIALVPPGVRLDTLLPSDD 120
           YSPRVLQNLLILMILRWFECFVPNLDDDNCFLALKAGGGGQRIALVPPGVRLDTLLPSDD
Sbjct: 61  YSPRVLQNLLILMILRWFECFVPNLDDDNCFLALKAGGGGQRIALVPPGVRLDTLLPSDD 120

Query: 121 NHDVTMVATAIFNALFVALLIRLGEGAQNSLRLIRSALKREPDPEQPCLLNSDSFS 176
           NHDVTMVATAIFNALFVALLIRLGEGAQNSLRLIRSALKREPDPEQPCLLNSDSFS
Sbjct: 121 NHDVTMVATAIFNALFVALLIRLGEGAQNSLRLIRSALKREPDPEQPCLLNSDSFS 176

The following BLAST results are available for this feature:
BLAST of Csor.00g171710 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g171710 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6572445.11.44e-123100.00hypothetical protein SDJN03_29173, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g171710 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g171710 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g171710.m01Csor.00g171710.m01mRNA