Csor.00g171380 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g171380
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Aldo_ket_red domain-containing protein
Location	Csor_Chr11: 8193254 .. 8194751 (+)
RNA-Seq Expression	Csor.00g171380
Synteny	Csor.00g171380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAATTCAAGGCCCACCTTTTCTTCTTATGATTCGAGTTTCCGTCGAATTCTGCGTTACTTCCAGCCATTAATCGGTTCTTCCATAGCTTCGATTAGGCTCTCTTTGAACTTCGTGTTTGCCGTAGCCATGGCGGTGCAGTTAAGTTACGCCTGTTTTTCATTTTTGCCGATGAATCGCAGTAGAATTTACAGACCGAAAGCTGTGGCTTCTGAGGATTATGGCACATTGACATCACAGGAAGAGAAGGTGAAGTTGGGCGGTTCTGAACTGAAGGTTACTAGGCTGGGAATTGGAGCTTGGTCTTGGGGAGACAACAGCTACTGGAATAACTTTGAATGGGATGGGTAAAGTTTCTGAAACTGACACTCAAATTATACCCAAAAATTTGAATATGTTGAAACTCTTTTGAGATTGATTGTTAATTTCTTGGCTGATAAAGGTAGCTAGTTTTTTGATGAATTTGAGTTAGATTAGTTCTCTGTTTTCTGTTCGTTTTTTTTAGATACTCAAATGATGATTATGATGAACACATGATCTGCTTGTTTCCTAAAATTTGTTGGATTATGTTCTCTGTTCTATGGTGTATTTGTTAAAATTTCTTGTAAAAACAATTAGCAAATTGGTTTTAAGCTTATAGAACAGCTCAAGGTTTCCCTTTCGACTTTGAACAATGTGTAGCTGGATATTGTCCTCTTTGGGTTTTTTTCTTTCGGAGCTTCAGCTCCCGCGTTATGGCTAGGGAGAGGTTTCCACACCTTTATAAATAATGTTTTCGGGTTCTCCTCCCCAAACCGATTTGGATCTCACAATCCACCCCTCATTTCGGGGCAGCGTTCTCGCTGGCACTGTTTTCTTCTCCAATTGAGTTGTGGACACCCCCAATCCACTTCTTTCGAGACCCCAACATCCTTGCTATGCCACACCGTTTCGTGTCAACCTGCTTGTTGTTACATTGTCCGTAGTGCCATGGTTCTGATACCCATTTGTTTACAACTCAAGCCCGCTGCCTAGCAAATTGGTTTTACAGCTCTTGTTAGGGTGATAAACCTTATAGAACACAGTTCATGGGGATAAAGTTCTTCCTAGTGATCTGTACAACTATGTAAAGTCTTCAGCTCAGTAATGGAACCAGCTCATTAGTAGTTTATTTCCTCCTGATTTTGATTTTGGACATTGGTAACTAAATGTGTTGATTGACTTAGATGGTTTCATTAGTGGTAGAGTATGAATATGTTTGATGTCTCTTGTTTTGGGGTGATTCAGATAGGATGATGAAGGCTGCTAAGGCTGCGTTTGGATGCCGGGTGTTGACCGTGGCATGTACCTTTGTCGATACCGCTGAAGTTTATTGCCTCATCGGTGGGATATAAGATTGACTTATGTTCACTTTCTTGTCTTATGTTCCATGAAAGATCTTAGCTAATGAAGTGTTAATGATCTTATTCTTTGGACAGTTCGCGTTAGGTGCTATAAGTTCAGGCAACTCTTCTAG

mRNA sequence

ATGAAAAATTCAAGGCCCACCTTTTCTTCTTATGATTCGAGTTTCCGTCGAATTCTGCGTTACTTCCAGCCATTAATCGGTTCTTCCATAGCTTCGATTAGGCTCTCTTTGAACTTCGTGTTTGCCGTAGCCATGGCGGTGCAGTTAAGTTACGCCTGTTTTTCATTTTTGCCGATGAATCGCAGTAGAATTTACAGACCGAAAGCTGTGGCTTCTGAGGATTATGGCACATTGACATCACAGGAAGAGAAGGTGAAGTTGGGCGGTTCTGAACTGAAGGTTACTAGGCTGGGAATTGGAGCTTGGTCTTGGGGAGACAACAGCTACTGGAATAACTTTGAATGGGATGGGATGATGAAGGCTGCTAAGGCTGCGTTTGGATGCCGGGTGTTGACCGTGGCATGTACCTTTGTCGATACCGCTGAAGTTTATTGCCTCATCGTTCGCGTTAGGTGCTATAAGTTCAGGCAACTCTTCTAG

Coding sequence (CDS)

ATGAAAAATTCAAGGCCCACCTTTTCTTCTTATGATTCGAGTTTCCGTCGAATTCTGCGTTACTTCCAGCCATTAATCGGTTCTTCCATAGCTTCGATTAGGCTCTCTTTGAACTTCGTGTTTGCCGTAGCCATGGCGGTGCAGTTAAGTTACGCCTGTTTTTCATTTTTGCCGATGAATCGCAGTAGAATTTACAGACCGAAAGCTGTGGCTTCTGAGGATTATGGCACATTGACATCACAGGAAGAGAAGGTGAAGTTGGGCGGTTCTGAACTGAAGGTTACTAGGCTGGGAATTGGAGCTTGGTCTTGGGGAGACAACAGCTACTGGAATAACTTTGAATGGGATGGGATGATGAAGGCTGCTAAGGCTGCGTTTGGATGCCGGGTGTTGACCGTGGCATGTACCTTTGTCGATACCGCTGAAGTTTATTGCCTCATCGTTCGCGTTAGGTGCTATAAGTTCAGGCAACTCTTCTAG

Protein sequence

MKNSRPTFSSYDSSFRRILRYFQPLIGSSIASIRLSLNFVFAVAMAVQLSYACFSFLPMNRSRIYRPKAVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWSWGDNSYWNNFEWDGMMKAAKAAFGCRVLTVACTFVDTAEVYCLIVRVRCYKFRQLF

Homology

[Close]

BLAST of Csor.00g171380 vs. ExPASy Swiss-Prot
Match: Q94A68 (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g06690 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.3e-18
Identity = 49/79 (62.03%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 68  KAVASED-YGTLTSQEEKVKLGGSELKVTRLGIGAWSWGDNSYWNNFEWDG-MMKAAKAA 127
           +AVAS D      S+E KVKLGGS+LKVT+LGIG WSWGDNSYWN+F+WD   +KAAK A
Sbjct: 31  RAVASGDSVAPAISEESKVKLGGSDLKVTKLGIGVWSWGDNSYWNDFQWDDRKLKAAKGA 90

Query: 128 FGCRVLTVACTFVDTAEVY 145
           F    L     F DTAEVY
Sbjct: 91  FDTS-LDNGIDFFDTAEVY 108

[Close]

BLAST of Csor.00g171380 vs. NCBI nr
Match: KAG6588549.1 (putative oxidoreductase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 318 bits (815), Expect = 1.73e-109
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MKNSRPTFSSYDSSFRRILRYFQPLIGSSIASIRLSLNFVFAVAMAVQLSYACFSFLPMN 60
           MKNSRPTFSSYDSSFRRILRYFQPLIGSSIASIRLSLNFVFAVAMAVQLSYACFSFLPMN
Sbjct: 1   MKNSRPTFSSYDSSFRRILRYFQPLIGSSIASIRLSLNFVFAVAMAVQLSYACFSFLPMN 60

Query: 61  RSRIYRPKAVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWSWGDNSYWNNFEWDGMMK 120
           RSRIYRPKAVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWSWGDNSYWNNFEWDGMMK
Sbjct: 61  RSRIYRPKAVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWSWGDNSYWNNFEWDGMMK 120

Query: 121 AAKAAFGCRVLTVACTFVDTAEVYCLIVRVRCYKFRQLF 159
           AAKAAFGCRVLTVACTFVDTAEVYCLIVRVRCYKFRQLF
Sbjct: 121 AAKAAFGCRVLTVACTFVDTAEVYCLIVRVRCYKFRQLF 159

[Close]

BLAST of Csor.00g171380 vs. NCBI nr
Match: XP_023525971.1 (uncharacterized oxidoreductase At1g06690, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174 bits (442), Expect = 4.34e-50
Identity = 90/101 (89.11%), Postives = 91/101 (90.10%), Query Frame = 0


Query: 45  MAVQLSYACFSFLPMNRSRIYRPKAVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWSW 104
           MAVQLSYACFSFLPMNRSRIYRP+AVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWSW
Sbjct: 1   MAVQLSYACFSFLPMNRSRIYRPRAVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWSW 60

Query: 105 GDNSYWNNFEWDG-MMKAAKAAFGCRVLTVACTFVDTAEVY 144
           GDNSYWNNFEWD  MMKAAKAAF   V     TFVDTAEVY
Sbjct: 61  GDNSYWNNFEWDDRMMKAAKAAFDAGVDR-GITFVDTAEVY 100

[Close]

BLAST of Csor.00g171380 vs. NCBI nr
Match: KAG7037507.1 (putative oxidoreductase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 174 bits (442), Expect = 8.19e-50
Identity = 90/101 (89.11%), Postives = 91/101 (90.10%), Query Frame = 0


Query: 45  MAVQLSYACFSFLPMNRSRIYRPKAVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWSW 104
           MAVQLSYACFSFLPMNRSRIYRP+AVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWSW
Sbjct: 1   MAVQLSYACFSFLPMNRSRIYRPRAVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWSW 60

Query: 105 GDNSYWNNFEWDG-MMKAAKAAFGCRVLTVACTFVDTAEVY 144
           GDNSYWNNFEWD  MMKAAKAAF   V     TFVDTAEVY
Sbjct: 61  GDNSYWNNFEWDDRMMKAAKAAFDAGVDR-GITFVDTAEVY 100

[Close]

BLAST of Csor.00g171380 vs. NCBI nr
Match: XP_022940086.1 (uncharacterized oxidoreductase At1g06690, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 172 bits (437), Expect = 2.42e-49
Identity = 89/101 (88.12%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 45  MAVQLSYACFSFLPMNRSRIYRPKAVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWSW 104
           MAVQLSYACFSFLPMNRSRIYRP+AVASEDYGTLTS EEKVKLGGSELKVTRLGIGAWSW
Sbjct: 1   MAVQLSYACFSFLPMNRSRIYRPRAVASEDYGTLTSHEEKVKLGGSELKVTRLGIGAWSW 60

Query: 105 GDNSYWNNFEWDG-MMKAAKAAFGCRVLTVACTFVDTAEVY 144
           GDNSYWNNFEWD  MMKAAKAAF   V     TFVDTAEVY
Sbjct: 61  GDNSYWNNFEWDDRMMKAAKAAFDAGVDR-GITFVDTAEVY 100

[Close]

BLAST of Csor.00g171380 vs. NCBI nr
Match: XP_022982441.1 (uncharacterized oxidoreductase At1g06690, chloroplastic [Cucurbita maxima])

HSP 1 Score: 171 bits (434), Expect = 6.80e-49
Identity = 88/101 (87.13%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 45  MAVQLSYACFSFLPMNRSRIYRPKAVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWSW 104
           MAVQLSYACFSFLPMNRSRIYRP+A+ASEDYGTLTS EEKVKLGGSELKVTRLGIGAWSW
Sbjct: 1   MAVQLSYACFSFLPMNRSRIYRPRALASEDYGTLTSHEEKVKLGGSELKVTRLGIGAWSW 60

Query: 105 GDNSYWNNFEWDG-MMKAAKAAFGCRVLTVACTFVDTAEVY 144
           GDNSYWNNFEWD  MMKAAKAAF   V     TFVDTAEVY
Sbjct: 61  GDNSYWNNFEWDDRMMKAAKAAFDAGVDR-GITFVDTAEVY 100

[Close]

BLAST of Csor.00g171380 vs. ExPASy TrEMBL
Match: A0A6J1FHH6 (uncharacterized oxidoreductase At1g06690, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111445810 PE=4 SV=1)

HSP 1 Score: 172 bits (437), Expect = 1.17e-49
Identity = 89/101 (88.12%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 45  MAVQLSYACFSFLPMNRSRIYRPKAVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWSW 104
           MAVQLSYACFSFLPMNRSRIYRP+AVASEDYGTLTS EEKVKLGGSELKVTRLGIGAWSW
Sbjct: 1   MAVQLSYACFSFLPMNRSRIYRPRAVASEDYGTLTSHEEKVKLGGSELKVTRLGIGAWSW 60

Query: 105 GDNSYWNNFEWDG-MMKAAKAAFGCRVLTVACTFVDTAEVY 144
           GDNSYWNNFEWD  MMKAAKAAF   V     TFVDTAEVY
Sbjct: 61  GDNSYWNNFEWDDRMMKAAKAAFDAGVDR-GITFVDTAEVY 100

[Close]

BLAST of Csor.00g171380 vs. ExPASy TrEMBL
Match: A0A6J1IZC3 (uncharacterized oxidoreductase At1g06690, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481268 PE=4 SV=1)

HSP 1 Score: 171 bits (434), Expect = 3.29e-49
Identity = 88/101 (87.13%), Postives = 90/101 (89.11%), Query Frame = 0


Query: 45  MAVQLSYACFSFLPMNRSRIYRPKAVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWSW 104
           MAVQLSYACFSFLPMNRSRIYRP+A+ASEDYGTLTS EEKVKLGGSELKVTRLGIGAWSW
Sbjct: 1   MAVQLSYACFSFLPMNRSRIYRPRALASEDYGTLTSHEEKVKLGGSELKVTRLGIGAWSW 60

Query: 105 GDNSYWNNFEWDG-MMKAAKAAFGCRVLTVACTFVDTAEVY 144
           GDNSYWNNFEWD  MMKAAKAAF   V     TFVDTAEVY
Sbjct: 61  GDNSYWNNFEWDDRMMKAAKAAFDAGVDR-GITFVDTAEVY 100

[Close]

BLAST of Csor.00g171380 vs. ExPASy TrEMBL
Match: A0A6J1CNJ8 (uncharacterized oxidoreductase At1g06690, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012897 PE=4 SV=1)

HSP 1 Score: 147 bits (370), Expect = 1.08e-39
Identity = 74/101 (73.27%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 45  MAVQLSYACFSFLPMNRSRIYRPKAVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWSW 104
           MAV LSYACF+  P N+SRIYR + VASEDYGTLTS EEKVKLGGSELKVT LG+G+WSW
Sbjct: 1   MAVHLSYACFAISPRNQSRIYRVRGVASEDYGTLTSPEEKVKLGGSELKVTTLGVGSWSW 60

Query: 105 GDNSYWNNFEWDGM-MKAAKAAFGCRVLTVACTFVDTAEVY 144
           GDNSYWNNFEWD   MK AKAAF   +     TF+DTAEVY
Sbjct: 61  GDNSYWNNFEWDDRKMKDAKAAFDASIDR-GITFIDTAEVY 100

[Close]

BLAST of Csor.00g171380 vs. ExPASy TrEMBL
Match: A0A1S3CS16 (uncharacterized oxidoreductase At1g06690, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504124 PE=4 SV=1)

HSP 1 Score: 128 bits (322), Expect = 1.31e-32
Identity = 68/102 (66.67%), Postives = 78/102 (76.47%), Query Frame = 0


Query: 45  MAVQL-SYACFSFLPMNRSRIYRPKAVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWS 104
           MAV L S  C S  P NRSRI+R +A+ SE +GT+TSQE+ VKLGGSELKV+RLGIGAW+
Sbjct: 1   MAVHLCSVCCLSIPPFNRSRIFRVRALGSEGFGTMTSQEDNVKLGGSELKVSRLGIGAWA 60

Query: 105 WGDNSYWNNFEW-DGMMKAAKAAFGCRVLTVACTFVDTAEVY 144
           WGDNSYWN+F W D M KAAKAAF   V     TF+DTAEVY
Sbjct: 61  WGDNSYWNDFGWNDVMTKAAKAAFNASVDR-GITFIDTAEVY 101

[Close]

BLAST of Csor.00g171380 vs. ExPASy TrEMBL
Match: A0A0A0L491 (Aldo_ket_red domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G615230 PE=4 SV=1)

HSP 1 Score: 126 bits (317), Expect = 7.05e-32
Identity = 68/102 (66.67%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 45  MAVQL-SYACFSFLPMNRSRIYRPKAVASEDYGTLTSQEEKVKLGGSELKVTRLGIGAWS 104
           MAV L S +  S  P+NR+ I+  +A+ S+D+GTLTSQEEKVKLGGSELKV+RLGIGAWS
Sbjct: 1   MAVHLCSVSSLSIPPLNRTGIFTVRALGSKDFGTLTSQEEKVKLGGSELKVSRLGIGAWS 60

Query: 105 WGDNSYWNNFEW-DGMMKAAKAAFGCRVLTVACTFVDTAEVY 144
           WGDNSYWN+F W D M KAAKAAF   V +   TF+DTAEVY
Sbjct: 61  WGDNSYWNDFGWNDVMTKAAKAAFNASVDS-GITFIDTAEVY 101

[Close]

BLAST of Csor.00g171380 vs. TAIR 10
Match: AT1G06690.1 (NAD(P)-linked oxidoreductase superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 5.9e-19
Identity = 49/79 (62.03%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 68  KAVASED-YGTLTSQEEKVKLGGSELKVTRLGIGAWSWGDNSYWNNFEWDG-MMKAAKAA 127
           +AVAS D      S+E KVKLGGS+LKVT+LGIG WSWGDNSYWN+F+WD   +KAAK A
Sbjct: 31  RAVASGDSVAPAISEESKVKLGGSDLKVTKLGIGVWSWGDNSYWNDFQWDDRKLKAAKGA 90

Query: 128 FGCRVLTVACTFVDTAEVY 145
           F    L     F DTAEVY
Sbjct: 91  FDTS-LDNGIDFFDTAEVY 108

The following BLAST results are available for this feature:

BLAST of Csor.00g171380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94A68	8.3e-18	62.03	Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana ...	[more]

BLAST of Csor.00g171380 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588549.1	1.73e-109	100.00	putative oxidoreductase, chloroplastic, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_023525971.1	4.34e-50	89.11	uncharacterized oxidoreductase At1g06690, chloroplastic [Cucurbita pepo subsp. p...	[more]
KAG7037507.1	8.19e-50	89.11	putative oxidoreductase, chloroplastic [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_022940086.1	2.42e-49	88.12	uncharacterized oxidoreductase At1g06690, chloroplastic-like [Cucurbita moschata...	[more]
XP_022982441.1	6.80e-49	87.13	uncharacterized oxidoreductase At1g06690, chloroplastic [Cucurbita maxima]	[more]

BLAST of Csor.00g171380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FHH6	1.17e-49	88.12	uncharacterized oxidoreductase At1g06690, chloroplastic-like OS=Cucurbita moscha...	[more]
A0A6J1IZC3	3.29e-49	87.13	uncharacterized oxidoreductase At1g06690, chloroplastic OS=Cucurbita maxima OX=3...	[more]
A0A6J1CNJ8	1.08e-39	73.27	uncharacterized oxidoreductase At1g06690, chloroplastic OS=Momordica charantia O...	[more]
A0A1S3CS16	1.31e-32	66.67	uncharacterized oxidoreductase At1g06690, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A0A0L491	7.05e-32	66.67	Aldo_ket_red domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G61523...	[more]

BLAST of Csor.00g171380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06690.1	5.9e-19	62.03	NAD(P)-linked oxidoreductase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036812	NADP-dependent oxidoreductase domain superfamily	GENE3D	3.20.20.100		coord: 83..149 e-value: 2.6E-6 score: 28.6
IPR036812	NADP-dependent oxidoreductase domain superfamily	SUPERFAMILY	51430	NAD(P)-linked oxidoreductase	coord: 84..145
None	No IPR available	PANTHER	PTHR43625	AFLATOXIN B1 ALDEHYDE REDUCTASE	coord: 59..146
None	No IPR available	PANTHER	PTHR43625:SF22	OS07G0143000 PROTEIN	coord: 59..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g171380.m01	Csor.00g171380.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004033	aldo-keto reductase (NADP) activity
molecular_function	GO:0047834	D-threo-aldose 1-dehydrogenase activity