Csor.00g170980 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g170980
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	17.8 kDa class I heat shock protein-like
Location	Csor_Chr13: 11020458 .. 11021059 (+)
RNA-Seq Expression	Csor.00g170980
Synteny	Csor.00g170980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAAGGTGAAGCTTCGAATGTGTCGTACGAGGAATTCGAGCCTTTCTGCAAATGGAAAAAACTCGACGACTCCGACGTTCATGTTCTTGAGGTTCATCTCCCAGGTATTCATCAAATCAACTTACGGTCTCTTCTGTATGCTCATTATATTCTTAGTGATTTGAAATTGAAAACTGCACTTGAGAAACAGAATTCAAGAAAGAAGAATTGAGGGTTCGGATAAAGAACAACTCTATCCTTGCAATTTCCGGCGAGCACCTCGCCAATGATGGGAAGAAGATGCAATTCAACAGAGAAATCAAACTCCCAAAGGATATATACCCAGACCAAATCCGTGCCAAATTCGGTGGCTCTGTCCTTTCTATCACGATGCCTAAGAAACCCAGCTCGGCGGAAAGCAGCAAACCAAAGGCGGACGCCGCCTCGGAGGGTAATGACACAGCACCCAATGATGATGGTAAGCCAAAGAACTTGATATCCAGGTTAACAAGTCCATTATCGAGGCTGAAATTTAGCAAGAAAAAGGCGACGGCTTTGGCGGCGGCAGTGGTGATTCTGGCCTTCGGAGCTTACTACTTGATTAAAAACAGGGATTAA

mRNA sequence

ATGGAGAAAGGTGAAGCTTCGAATGTGTCGTACGAGGAATTCGAGCCTTTCTGCAAATGGAAAAAACTCGACGACTCCGACGTTCATGTTCTTGAGGTTCATCTCCCAGAATTCAAGAAAGAAGAATTGAGGGTTCGGATAAAGAACAACTCTATCCTTGCAATTTCCGGCGAGCACCTCGCCAATGATGGGAAGAAGATGCAATTCAACAGAGAAATCAAACTCCCAAAGGATATATACCCAGACCAAATCCGTGCCAAATTCGGTGGCTCTGTCCTTTCTATCACGATGCCTAAGAAACCCAGCTCGGCGGAAAGCAGCAAACCAAAGGCGGACGCCGCCTCGGAGGGTAATGACACAGCACCCAATGATGATGGTAAGCCAAAGAACTTGATATCCAGGTTAACAAGTCCATTATCGAGGCTGAAATTTAGCAAGAAAAAGGCGACGGCTTTGGCGGCGGCAGTGGTGATTCTGGCCTTCGGAGCTTACTACTTGATTAAAAACAGGGATTAA

Coding sequence (CDS)

ATGGAGAAAGGTGAAGCTTCGAATGTGTCGTACGAGGAATTCGAGCCTTTCTGCAAATGGAAAAAACTCGACGACTCCGACGTTCATGTTCTTGAGGTTCATCTCCCAGAATTCAAGAAAGAAGAATTGAGGGTTCGGATAAAGAACAACTCTATCCTTGCAATTTCCGGCGAGCACCTCGCCAATGATGGGAAGAAGATGCAATTCAACAGAGAAATCAAACTCCCAAAGGATATATACCCAGACCAAATCCGTGCCAAATTCGGTGGCTCTGTCCTTTCTATCACGATGCCTAAGAAACCCAGCTCGGCGGAAAGCAGCAAACCAAAGGCGGACGCCGCCTCGGAGGGTAATGACACAGCACCCAATGATGATGGTAAGCCAAAGAACTTGATATCCAGGTTAACAAGTCCATTATCGAGGCTGAAATTTAGCAAGAAAAAGGCGACGGCTTTGGCGGCGGCAGTGGTGATTCTGGCCTTCGGAGCTTACTACTTGATTAAAAACAGGGATTAA

Protein sequence

MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHLANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGNDTAPNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKNRD

Homology

[Close]

BLAST of Csor.00g170980 vs. ExPASy Swiss-Prot
Match: Q9LNW0 (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.8 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-09
Identity = 39/107 (36.45%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 20  WKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGE-HLANDGKK----------MQ 79
           WK  + ++ HV +  LP  KKEE++V I+++S+L ISGE H+  + K+           Q
Sbjct: 52  WK--ETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQ 111

Query: 80  FNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAAS 116
           F+R+ KLP+++  DQ++A     VL++T+PK     E +K KA   S
Sbjct: 112 FSRKFKLPENVKMDQVKASMENGVLTVTVPK----VEEAKKKAQVKS 152

[Close]

BLAST of Csor.00g170980 vs. ExPASy Swiss-Prot
Match: Q9XIE3 (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 9.9e-09
Identity = 36/107 (33.64%), Postives = 60/107 (56.07%), Query Frame = 0


Query: 20  WKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHLANDGKKMQ----------- 79
           WK  + ++ HV +  LP  KKEE++V I+++S+L ISGE      +K             
Sbjct: 50  WK--ETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGG 109

Query: 80  FNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAAS 116
           F+R+ +LP+++  DQ++A     VL++T+PK     E++K KA   S
Sbjct: 110 FSRKFRLPENVKMDQVKASMENGVLTVTVPK----VETNKKKAQVKS 150

[Close]

BLAST of Csor.00g170980 vs. ExPASy Swiss-Prot
Match: Q9ZW31 (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.9e-08
Identity = 31/84 (36.90%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 27  DVHVLEVHLPEFKKEELRVRIKNNSILAISGE-HLANDGK----------KMQFNREIKL 86
           + HV +  LP  KKEE++V I+ +S+L ISGE H+  + K            QF R  +L
Sbjct: 55  EAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRL 114

Query: 87  PKDIYPDQIRAKFGGSVLSITMPK 100
           P+++  DQ++A     VL++T+PK
Sbjct: 115 PENVKMDQVKAAMENGVLTVTVPK 138

[Close]

BLAST of Csor.00g170980 vs. ExPASy Swiss-Prot
Match: P31673 (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP17.4 PE=2 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 2.4e-07
Identity = 32/101 (31.68%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 20  WKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHLANDGKKM-----------Q 79
           WK  +  + HV +  +P  KKEE++V +++ ++L ISGE +    +K            +
Sbjct: 51  WK--ETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGK 110

Query: 80  FNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKP 110
           F R  +LP++  P+QI+A     VL++T+PK+    E  KP
Sbjct: 111 FLRRFRLPENTKPEQIKASMENGVLTVTVPKE----EPKKP 145

[Close]

BLAST of Csor.00g170980 vs. ExPASy Swiss-Prot
Match: Q84J50 (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.2e-07
Identity = 34/101 (33.66%), Postives = 54/101 (53.47%), Query Frame = 0


Query: 20  WKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHLANDGKKM-----------Q 79
           WK  +  +VHV +  +P  KKEE++V + + +IL ISGE      +K            +
Sbjct: 56  WK--ETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGK 115

Query: 80  FNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKP 110
           F R  +LP++  P+QI+A     VL++T+PK+    E  KP
Sbjct: 116 FLRRFRLPENTKPEQIKASMENGVLTVTVPKE----EPKKP 150

[Close]

BLAST of Csor.00g170980 vs. NCBI nr
Match: XP_022923784.1 (17.8 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6584432.1 17.8 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332 bits (850), Expect = 1.97e-114
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60
           MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL
Sbjct: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60

Query: 61  ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGNDT 120
           ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGNDT
Sbjct: 61  ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGNDT 120

Query: 121 APNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKNRD 171
           APNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKNRD
Sbjct: 121 APNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKNRD 171

[Close]

BLAST of Csor.00g170980 vs. NCBI nr
Match: KAG7020019.1 (17.8 kDa class I heat shock protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330 bits (847), Expect = 5.66e-114
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60
           MEKGEASN+SYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL
Sbjct: 1   MEKGEASNLSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60

Query: 61  ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGNDT 120
           ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGNDT
Sbjct: 61  ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGNDT 120

Query: 121 APNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKNRD 171
           APNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKNRD
Sbjct: 121 APNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKNRD 171

[Close]

BLAST of Csor.00g170980 vs. NCBI nr
Match: XP_023520341.1 (17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328 bits (840), Expect = 6.61e-113
Identity = 169/171 (98.83%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60
           MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL
Sbjct: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60

Query: 61  ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGNDT 120
           ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAE  KPKADAASEGNDT
Sbjct: 61  ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAEIGKPKADAASEGNDT 120

Query: 121 APNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKNRD 171
           APNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKNRD
Sbjct: 121 APNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKNRD 171

[Close]

BLAST of Csor.00g170980 vs. NCBI nr
Match: XP_023001660.1 (17.8 kDa class I heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 320 bits (820), Expect = 7.67e-110
Identity = 166/172 (96.51%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60
           MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL
Sbjct: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60

Query: 61  -ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGND 120
            ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAE  KPKADAASEGND
Sbjct: 61  TANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAEIGKPKADAASEGND 120

Query: 121 TAPNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKNRD 171
           TAPNDDG+PKNLISRLTSPLSRLKFSKKKATALAAAV+ILAFGAYYL+KNRD
Sbjct: 121 TAPNDDGEPKNLISRLTSPLSRLKFSKKKATALAAAVLILAFGAYYLVKNRD 172

[Close]

BLAST of Csor.00g170980 vs. NCBI nr
Match: XP_008465577.1 (PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo] >KAA0036046.1 16.9 kDa class I heat shock protein 1 [Cucumis melo var. makuwa] >TYJ98853.1 16.9 kDa class I heat shock protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 247 bits (631), Expect = 4.24e-81
Identity = 135/170 (79.41%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60
           MEKGE S V YEEFEPFCKWKKL+DSDV  LEVHLPEFKKEELRVRIKNNSIL +SGEHL
Sbjct: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDV--LEVHLPEFKKEELRVRIKNNSILTLSGEHL 60

Query: 61  -ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGND 120
            A DGKKM FNREIKLPKDIYPD+IRAKFGG+VLSITMPKK S  E SKP  D ASE   
Sbjct: 61  TAKDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKL 120

Query: 121 TAPNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKN 169
           T  N +GKPKN ISRL SPLSRLKFSK+ ATA+A AVVILA G YYLIKN
Sbjct: 121 TQSNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of Csor.00g170980 vs. ExPASy TrEMBL
Match: A0A6J1E7D1 (17.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111431393 PE=3 SV=1)

HSP 1 Score: 332 bits (850), Expect = 9.55e-115
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60
           MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL
Sbjct: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60

Query: 61  ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGNDT 120
           ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGNDT
Sbjct: 61  ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGNDT 120

Query: 121 APNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKNRD 171
           APNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKNRD
Sbjct: 121 APNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKNRD 171

[Close]

BLAST of Csor.00g170980 vs. ExPASy TrEMBL
Match: A0A6J1KLT1 (17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111495735 PE=3 SV=1)

HSP 1 Score: 320 bits (820), Expect = 3.71e-110
Identity = 166/172 (96.51%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60
           MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL
Sbjct: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60

Query: 61  -ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGND 120
            ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAE  KPKADAASEGND
Sbjct: 61  TANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAEIGKPKADAASEGND 120

Query: 121 TAPNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKNRD 171
           TAPNDDG+PKNLISRLTSPLSRLKFSKKKATALAAAV+ILAFGAYYL+KNRD
Sbjct: 121 TAPNDDGEPKNLISRLTSPLSRLKFSKKKATALAAAVLILAFGAYYLVKNRD 172

[Close]

BLAST of Csor.00g170980 vs. ExPASy TrEMBL
Match: A0A5D3BHU7 (16.9 kDa class I heat shock protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00480 PE=3 SV=1)

HSP 1 Score: 247 bits (631), Expect = 2.05e-81
Identity = 135/170 (79.41%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60
           MEKGE S V YEEFEPFCKWKKL+DSDV  LEVHLPEFKKEELRVRIKNNSIL +SGEHL
Sbjct: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDV--LEVHLPEFKKEELRVRIKNNSILTLSGEHL 60

Query: 61  -ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGND 120
            A DGKKM FNREIKLPKDIYPD+IRAKFGG+VLSITMPKK S  E SKP  D ASE   
Sbjct: 61  TAKDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKL 120

Query: 121 TAPNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKN 169
           T  N +GKPKN ISRL SPLSRLKFSK+ ATA+A AVVILA G YYLIKN
Sbjct: 121 TQSNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of Csor.00g170980 vs. ExPASy TrEMBL
Match: A0A1S3CP71 (16.9 kDa class I heat shock protein 1 OS=Cucumis melo OX=3656 GN=LOC103502934 PE=3 SV=1)

HSP 1 Score: 247 bits (631), Expect = 2.05e-81
Identity = 135/170 (79.41%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60
           MEKGE S V YEEFEPFCKWKKL+DSDV  LEVHLPEFKKEELRVRIKNNSIL +SGEHL
Sbjct: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDV--LEVHLPEFKKEELRVRIKNNSILTLSGEHL 60

Query: 61  -ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGND 120
            A DGKKM FNREIKLPKDIYPD+IRAKFGG+VLSITMPKK S  E SKP  D ASE   
Sbjct: 61  TAKDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKL 120

Query: 121 TAPNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKN 169
           T  N +GKPKN ISRL SPLSRLKFSK+ ATA+A AVVILA G YYLIKN
Sbjct: 121 TQSNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of Csor.00g170980 vs. ExPASy TrEMBL
Match: A0A0A0LT66 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031780 PE=3 SV=1)

HSP 1 Score: 229 bits (584), Expect = 2.94e-74
Identity = 124/170 (72.94%), Postives = 139/170 (81.76%), Query Frame = 0


Query: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60
           MEKGE S+V Y +FEP+C+WKK++DSDV  LEV LPEFKKEELRVRIKNNSIL ISGE L
Sbjct: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDV--LEVQLPEFKKEELRVRIKNNSILTISGEQL 60

Query: 61  A-NDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGND 120
           A  DGKKM FNR+IKLPKD++PD+IRAKFGG++LSITMPKK S  E SKP  D ASE   
Sbjct: 61  AAKDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKL 120

Query: 121 TAPNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKN 169
           T  N +GKPKN IS+L SPLSRLKFSK  ATA+A AVVILA G YYLIKN
Sbjct: 121 TQSNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 168

[Close]

BLAST of Csor.00g170980 vs. TAIR 10
Match: AT1G54400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-16
Identity = 57/163 (34.97%), Postives = 86/163 (52.76%), Query Frame = 0


Query: 11  YEEFEPFCKWKKLDDSDVHVLEVHLPE-FKKEELRVRIKNNSILAISGEHLANDGKKMQF 70
           Y+E EPFC+W++ +D D  +LE+HLP   KKE L+++I N+ +L I+G    +  K ++F
Sbjct: 13  YDEIEPFCRWRRTEDID--ILELHLPSGLKKEHLKIQINNSGVLTITGGCPVDQTKTIRF 72

Query: 71  NREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGNDTAPNDDG--K 130
            +E K+ KD   ++IRAKF   VL +TMPK    A         A+  + T   D+G   
Sbjct: 73  MKETKVAKDCKRNEIRAKFSKGVLYVTMPKTIPIAAGLSVSLKGATPQHQTPKTDEGMRN 132

Query: 131 PKNLISRLTSPLSRLK--FSKKKATALAAAVVILAFGAYYLIK 169
             N  S   S    LK    +K      AAVV++A     ++K
Sbjct: 133 VANCSSEFYSKFGSLKQRLWRKTVVEGVAAVVVVAAAVLGVVK 173

[Close]

BLAST of Csor.00g170980 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10
Identity = 39/107 (36.45%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 20  WKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGE-HLANDGKK----------MQ 79
           WK  + ++ HV +  LP  KKEE++V I+++S+L ISGE H+  + K+           Q
Sbjct: 52  WK--ETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQ 111

Query: 80  FNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAAS 116
           F+R+ KLP+++  DQ++A     VL++T+PK     E +K KA   S
Sbjct: 112 FSRKFKLPENVKMDQVKASMENGVLTVTVPK----VEEAKKKAQVKS 152

[Close]

BLAST of Csor.00g170980 vs. TAIR 10
Match: AT2G27140.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 4.1e-10
Identity = 37/128 (28.91%), Postives = 62/128 (48.44%), Query Frame = 0


Query: 7   SNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHLANDGKK 66
           +N  Y+EFEP   WK   +     L ++LP F+KE+L+V++     L + G+  A   K 
Sbjct: 10  ANRIYDEFEPLSNWK--TEQGFEALTIYLPGFRKEQLKVQVTTTRKLRVMGDRPAGANKW 69

Query: 67  MQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKP-----KADAASEGNDTA 126
           ++F +E  +P +I  D + AKF G+ L + +P+     +   P     K     + N   
Sbjct: 70  IRFRKEFPIPPNIDVDSVSAKFEGANLVVRLPRTEPMGKQPSPIGTATKPPPVPKENPNL 129

Query: 127 PNDDGKPK 130
           P+   K K
Sbjct: 130 PSPSAKEK 135

[Close]

BLAST of Csor.00g170980 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 7.0e-10
Identity = 36/107 (33.64%), Postives = 60/107 (56.07%), Query Frame = 0


Query: 20  WKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHLANDGKKMQ----------- 79
           WK  + ++ HV +  LP  KKEE++V I+++S+L ISGE      +K             
Sbjct: 50  WK--ETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGG 109

Query: 80  FNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAAS 116
           F+R+ +LP+++  DQ++A     VL++T+PK     E++K KA   S
Sbjct: 110 FSRKFRLPENVKMDQVKASMENGVLTVTVPK----VETNKKKAQVKS 150

[Close]

BLAST of Csor.00g170980 vs. TAIR 10
Match: AT5G20970.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 2.0e-09
Identity = 38/125 (30.40%), Postives = 62/125 (49.60%), Query Frame = 0


Query: 11  YEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHLANDGKKMQFN 70
           Y+EFEP  +W    + D  VL   LP FKKE+L+V +     L ++GE      K ++F+
Sbjct: 10  YQEFEPATRW--TSEPDAEVLVADLPGFKKEQLKVSVTATRKLRLTGERPTGGNKWIRFH 69

Query: 71  REIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGNDTAPNDDGK-PK 130
           +EI +P  +  D + A F  + L I  PK  +    +KP      + +D      G+ PK
Sbjct: 70  QEIPVPLTVDIDSVSAMFKDNKLYIRHPKLKTEIPQTKPPTPVIMKPHDQHERKQGQGPK 129

Query: 131 NLISR 135
            ++ +
Sbjct: 130 AMVEK 132

The following BLAST results are available for this feature:

BLAST of Csor.00g170980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNW0	1.5e-09	36.45	17.8 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.8 P...	[more]
Q9XIE3	9.9e-09	33.64	17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
Q9ZW31	4.9e-08	36.90	17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P31673	2.4e-07	31.68	17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q84J50	3.2e-07	33.66	17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]

BLAST of Csor.00g170980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923784.1	1.97e-114	100.00	17.8 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6584432.1 17.8...	[more]
KAG7020019.1	5.66e-114	99.42	17.8 kDa class I heat shock protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023520341.1	6.61e-113	98.83	17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001660.1	7.67e-110	96.51	17.8 kDa class I heat shock protein-like [Cucurbita maxima]	[more]
XP_008465577.1	4.24e-81	79.41	PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo] >KAA0036046.1 16...	[more]

BLAST of Csor.00g170980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E7D1	9.55e-115	100.00	17.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KLT1	3.71e-110	96.51	17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A5D3BHU7	2.05e-81	79.41	16.9 kDa class I heat shock protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CP71	2.05e-81	79.41	16.9 kDa class I heat shock protein 1 OS=Cucumis melo OX=3656 GN=LOC103502934 PE...	[more]
A0A0A0LT66	2.94e-74	72.94	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031780 PE=3 S...	[more]

BLAST of Csor.00g170980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54400.1	2.2e-16	34.97	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	1.1e-10	36.45	HSP20-like chaperones superfamily protein	[more]
AT2G27140.1	4.1e-10	28.91	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	7.0e-10	33.64	HSP20-like chaperones superfamily protein	[more]
AT5G20970.1	2.0e-09	30.40	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 24..107 e-value: 3.5E-12 score: 46.4
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 8..116 score: 19.034565
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 7..125 e-value: 6.6E-18 score: 66.6
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 18..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..132
None	No IPR available	PANTHER	PTHR43670:SF10	HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN	coord: 7..168
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 24..99 e-value: 1.82754E-16 score: 68.3496
IPR045045	Small heat shock protein RTM2-like	PANTHER	PTHR43670	HEAT SHOCK PROTEIN 26	coord: 7..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g170980.m01	Csor.00g170980.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane