Csor.00g170910 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGGCAACGCTGTGTCTCCTCTGCATCCCTCTCCGATTCCCACCTAACCGTACTTCCTTCTCTTCTACTTCCATTTCCCTTACCCCTATTCGTGCTCAGAACCAGGAGATTCGGGTTTGCACCAATCGCACTTGCCGACGTCAAGGTTCCTTTCAGACACTCGAAACTCTCAGCGCCCTCGCACCTCCCACTATTACCGTCAATCCCTCTGGTTGCTTGGGGAAGTGCGGCGCTGGCCCTAACGTCGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGCGCCACGCCTGCTCGTGCTGCCGAGGTCATCATGCAATTGTCTGGTGGAGTTTCTGATTCTCTTGGCGTCTCTAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGGGCCGAATGTGAGGTGGAGGACGGGAATTTCTCTCAGGCTGACCTACTTCTTTCGAAGGTAAACTGTTCCGCCTTTTGCTGTGTGATCTCATTGATTAGTAAGTTTCCACTCTTCCTTCTTGGAACTTTGTTCAGAATAATACATTGTGTATGATGCCTTGATTCAATTTGTTGCAGGCGATAGAATTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTGTTCTACTTCTAGTTCCACGTTGTATCTTATTGTATACAAATCGTCGACTATATTTCCTTCCAATAGTAAATTTGGTAACAATCGTTGAGTTTACGATAATTGTTAGTACTCATTCAATTTTAAGTCCCGAAGTTCTTCCCAAATGCTCTATGCTGTTGATTTTATCCTACGTCTCTCTAGCATTTGTTTACTTTTTTTTTTTTTTCTTTATCTATATCTTTACTAAAGCAGCTGTATCCAAAAAATTTAGTTACACAGACTATTAAATTTTCAGGTCCATCGTAAGATTGGCTCTGGGGAATCATGCTGGTGCCCTTGAAGATGCAAATGAGGCTCTAAGAGTAGCTCCTCGATATCCCGAGGTGAGAAGTATTTTAGTTAATCTCCATGTGCATTACATTCCATCTAAAAAATTAACTAGGCCGTTACACTTCAACGACGAAGGGAGAAAATGTTTGAAACTACCAATCTGGAGACCAGGTAGTAGTACCTCAAATTATTGACAAGATCTACGATAAATAGAGTTCCGATTTCTTCCACTTCAAATGTTCTTAAGCAGATTTGTATAGTGCCAAGCTCTAGGTGTCAAGAGCAAAAGAAAATTCGGAGGATAACAGAAAAACTTAGGACGTGAACATCATCTATAATTGTAAATTCGGGTATCAACTTTTTGTTGGGCTTCTTGAGTCTTTGTGATGCATGAATCTTTATGTTAGGATTAAAAATGAATACCACTCGATTTTAGTTTAAAATTTGCCAGGACACACATGGATGGATGTAAAGAAAAGAACTATGTTTAAAATTCAAAAGAAGGATGATGCTAAACTGTAATTTAGAGGTCCTTCGAACCCTCACCCAACTAATAAACAAGCAACCCTTCGAAGATCATTACAAATTCTTGTCCTTTAACCGGTAAGATATGGGAAAAAAGGAGTCTAGCCCTGGAGTAAATTATCGTAATGTTCCCTAGACATGTTTCCTAATTTTCAATTTTCAGGCTTACATTTGCCAAGGTGACGTATTCTTATCTATGGACCATTTTGATTCGGCTGAGATGTCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGCCGTTCAAAGTCATTCAAGGTATTGATTCACTTATCTTAATATGAGGAGACTATGGGCAATTTCATTTCTAGGACAAAAGAGCAACCGCTTCAATCCATCAATTTTCAGGAATTTTGCCTGATTCTTCTTCTTCTTTTCTTTCTAGTTTTTGTTTTGGAGGAAGCACTGGGAAACAAATGCAAAATGGTTTCCATTGAAATGTTGGTTGGAATTGGCTAGAAGAATTTTTATCGCTAATTTTTCTGTTTTTGAGGGAGAAATTCTTTATTTTTTTAAGTTAAAAAAAACATTTTCAAAATGTTGTTCTCGTTGATGACAAACCTATATTTCAGAACTACTTCAAACTTAATGACAAACCACTTAATTGAAGCGTTTGCCATCTAATTTTCTCACTTAACTCTTTCAAGCATACCCTTTTGAATATGTATTCTCGTCATTTTACAAAATATGATTGAATTCAGTTTTTGCCCAGTGCTGCTAGAATGCCCGTTCAATATTCATTTAATATTTGCACACCATTTCTTCAATAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAATGCTGTGAGAACACAATAAAATCTGAGATGTGAATCAAGGAATAAGAATAATTGATGACAACAGTTCGAGATTCAGTCATTCCTTCAGGTTGTTTCCAGGTTTCAAATTTCTGACTCAGATTGTTGTTGAAATCTTATTAGGTTAACTACATAGAAATTCGATGCAGTTTGGAGTTTCATGAAAATTTGATTGGGAATTCGTACAATTCTGCATGAGAATGCTTTTGATCCCAGGAAATATAAGCGGCCAAGTGCATTGGATTGTAGAGTAATTGTTCCCCAATGGGTTATTTTATAGTGTCCTCCTCGTTCCTACCCTGCCACTATGGTCTTCGAGCTTAAAAAGAATGTCTAGAGATTAATAATTTTAAGAATTTTTAGGTTTGAGATAATTCCTAATCATTTTCATGTTGGAGGAAAAATCCCGCAATTTCGCTATCTCACAGTCATTATTCTTAGGGCATGCACTCACATGGAGAAAGTGATTCCTAACATGAACAGGAAGATGGAAAATTTGATTTGGGATTCTGAAGTTTGCTTATAAATAGGATTGCTACTGGGCATGAATTAGTATAGCAGCCAAAGGGTTCGAGTCCATGGTTAATAGTGTTCAAAATTTTCAAATCAGAAACTTCTCTGCCAAACTTATTTTTCAAGTAAGCGAACACATTTCATTTCTTTGGATACAGATTAAGCAAATAAATACACACTTTGGCCCCTATCCCGAACTCTGCACTTGCTGATTTTTCTGCTTGGAATGTTTCTCTCTTGTGGCAATCTCAATGATAGGAAAACTTTATACATCTTCCATTACTTGCTTTCTCTATAATATTGTTCTTTCAACCGATGGAGTAGGTTTTGAAAGTGATTGATCAGGCTTTTGCCATTGAAATTGTCCCTTGACTTCCAGTAAATAGGAACCTCTGGGACTGGGCATTTTCCAAATGTCTTTCCAGGACTAAGAGCCTATTTGAAATGACTTCTTTCTAAGTATTAAATGCCAATCTTTTTTAAGTACTTGGAAACCAAACAGGTCCTAAGCTGGGATAGTCTTTTATATCTATACTATACTGTCTGAAGTTAGTTCATAGGGTATTTAATATTGTGTGCTTGCTATTCAGCATTTAATGTCTAGTTTTGTTGATTACAATAATTGGCATGTTTCTTAATGCACAAGTGAACTTTATTATAAACAAACGCCCGAGCTTCAAAGTGTAAGAAGGGGTGTAATAATTGGCTTGGTTCAAAGTGTGAACTGAAAAGTTTGATACTTTGTCCAATTCTGCATAATTGGCTTGGTTTGATCGTGCATTATGAAACTGTGAATTGAATGTCTGGCAGGATGCCACCATTGTTGGCATAGACTCAGGTTCCTCTAATTACATTTCAACTAAAAACAGATCAAAGTTGGTGTTAGAAGGTGAGTGAACTTCCAACTATTTCATCATAATGCGTTCTCCTTTTTTTTTTCTTTTTTTGGAGAGAATTTCATACAGCTTTTTAATACTAGGGTTCATTATCCATCCAATGTCACCGATGCGATGCTAA ATGACGGCAACGCTGTGTCTCCTCTGCATCCCTCTCCGATTCCCACCTAACCGTACTTCCTTCTCTTCTACTTCCATTTCCCTTACCCCTATTCGTGCTCAGAACCAGGAGATTCGGGTTTGCACCAATCGCACTTGCCGACGTCAAGGTTCCTTTCAGACACTCGAAACTCTCAGCGCCCTCGCACCTCCCACTATTACCGTCAATCCCTCTGGTTGCTTGGGGAAGTGCGGCGCTGGCCCTAACGTCGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGCGCCACGCCTGCTCGTGCTGCCGAGGTCATCATGCAATTGTCTGGTGGAGTTTCTGATTCTCTTGGCGTCTCTAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGGGCCGAATGTGAGGTGGAGGACGGGAATTTCTCTCAGGCTGACCTACTTCTTTCGAAGGCGATAGAATTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTAAGATTGGCTCTGGGGAATCATGCTGGTGCCCTTGAAGATGCAAATGAGGCTCTAAGAGTAGCTCCTCGATATCCCGAGGCTTACATTTGCCAAGGTGACGTATTCTTATCTATGGACCATTTTGATTCGGCTGAGATGTCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGCCGTTCAAAGTCATTCAAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAATGCTGATGCCACCATTGTTGGCATAGACTCAGGTTCCTCTAATTACATTTCAACTAAAAACAGATCAAAGTTGGTGTTAGAAGGGTTCATTATCCATCCAATGTCACCGATGCGATGCTAA ATGACGGCAACGCTGTGTCTCCTCTGCATCCCTCTCCGATTCCCACCTAACCGTACTTCCTTCTCTTCTACTTCCATTTCCCTTACCCCTATTCGTGCTCAGAACCAGGAGATTCGGGTTTGCACCAATCGCACTTGCCGACGTCAAGGTTCCTTTCAGACACTCGAAACTCTCAGCGCCCTCGCACCTCCCACTATTACCGTCAATCCCTCTGGTTGCTTGGGGAAGTGCGGCGCTGGCCCTAACGTCGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGCGCCACGCCTGCTCGTGCTGCCGAGGTCATCATGCAATTGTCTGGTGGAGTTTCTGATTCTCTTGGCGTCTCTAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGGGCCGAATGTGAGGTGGAGGACGGGAATTTCTCTCAGGCTGACCTACTTCTTTCGAAGGCGATAGAATTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTAAGATTGGCTCTGGGGAATCATGCTGGTGCCCTTGAAGATGCAAATGAGGCTCTAAGAGTAGCTCCTCGATATCCCGAGGCTTACATTTGCCAAGGTGACGTATTCTTATCTATGGACCATTTTGATTCGGCTGAGATGTCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGCCGTTCAAAGTCATTCAAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAATGCTGATGCCACCATTGTTGGCATAGACTCAGGTTCCTCTAATTACATTTCAACTAAAAACAGATCAAAGTTGGTGTTAGAAGGGTTCATTATCCATCCAATGTCACCGATGCGATGCTAA MTATLCLLCIPLRFPPNRTSFSSTSISLTPIRAQNQEIRVCTNRTCRRQGSFQTLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQLSGGVSDSLGVSKSLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQGDVFLSMDHFDSAEMSYSTALEIDPSIRRSKSFKARVAKLQEKLNADATIVGIDSGSSNYISTKNRSKLVLEGFIIHPMSPMRC Homology
BLAST of Csor.00g170910 vs. ExPASy Swiss-Prot
Match: Q32LM2 (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos taurus OX=9913 GN=SGTA PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.8e-08 Identity = 41/121 (33.88%), Postives = 61/121 (50.41%), Query Frame = 0
BLAST of Csor.00g170910 vs. ExPASy Swiss-Prot
Match: O43765 (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo sapiens OX=9606 GN=SGTA PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.6e-08 Identity = 42/123 (34.15%), Postives = 60/123 (48.78%), Query Frame = 0
BLAST of Csor.00g170910 vs. ExPASy Swiss-Prot
Match: Q8BJU0 (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 4.8e-08 Identity = 43/135 (31.85%), Postives = 64/135 (47.41%), Query Frame = 0
BLAST of Csor.00g170910 vs. ExPASy Swiss-Prot
Match: O70593 (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus OX=10116 GN=Sgta PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.8e-08 Identity = 43/135 (31.85%), Postives = 64/135 (47.41%), Query Frame = 0
BLAST of Csor.00g170910 vs. ExPASy Swiss-Prot
Match: Q9LNB6 (Hsp70-Hsp90 organizing protein 1 OS=Arabidopsis thaliana OX=3702 GN=HOP1 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 6.2e-08 Identity = 31/105 (29.52%), Postives = 54/105 (51.43%), Query Frame = 0
BLAST of Csor.00g170910 vs. NCBI nr
Match: KAG6584438.1 (Small glutamine-rich tetratricopeptide repeat-containing protein alpha, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 561 bits (1445), Expect = 2.22e-201 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
BLAST of Csor.00g170910 vs. NCBI nr
Match: XP_022923908.1 (small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1 [Cucurbita moschata]) HSP 1 Score: 484 bits (1246), Expect = 1.37e-171 Identity = 246/249 (98.80%), Postives = 247/249 (99.20%), Query Frame = 0
BLAST of Csor.00g170910 vs. NCBI nr
Match: XP_023519354.1 (small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita pepo subsp. pepo]) HSP 1 Score: 483 bits (1242), Expect = 5.57e-171 Identity = 246/249 (98.80%), Postives = 246/249 (98.80%), Query Frame = 0
BLAST of Csor.00g170910 vs. NCBI nr
Match: XP_023001358.1 (uncharacterized protein LOC111495518 [Cucurbita maxima]) HSP 1 Score: 473 bits (1216), Expect = 5.10e-167 Identity = 239/249 (95.98%), Postives = 244/249 (97.99%), Query Frame = 0
BLAST of Csor.00g170910 vs. NCBI nr
Match: XP_038894326.1 (uncharacterized protein LOC120082956 [Benincasa hispida]) HSP 1 Score: 394 bits (1011), Expect = 1.56e-135 Identity = 206/266 (77.44%), Postives = 225/266 (84.59%), Query Frame = 0
BLAST of Csor.00g170910 vs. ExPASy TrEMBL
Match: A0A6J1EAV3 (small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431489 PE=4 SV=1) HSP 1 Score: 484 bits (1246), Expect = 6.62e-172 Identity = 246/249 (98.80%), Postives = 247/249 (99.20%), Query Frame = 0
BLAST of Csor.00g170910 vs. ExPASy TrEMBL
Match: A0A6J1KQA5 (uncharacterized protein LOC111495518 OS=Cucurbita maxima OX=3661 GN=LOC111495518 PE=4 SV=1) HSP 1 Score: 473 bits (1216), Expect = 2.47e-167 Identity = 239/249 (95.98%), Postives = 244/249 (97.99%), Query Frame = 0
BLAST of Csor.00g170910 vs. ExPASy TrEMBL
Match: A0A1S3AUF9 (tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 SV=1) HSP 1 Score: 389 bits (1000), Expect = 2.50e-134 Identity = 204/256 (79.69%), Postives = 226/256 (88.28%), Query Frame = 0
BLAST of Csor.00g170910 vs. ExPASy TrEMBL
Match: A0A0A0LQA2 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 PE=4 SV=1) HSP 1 Score: 389 bits (998), Expect = 5.04e-134 Identity = 203/256 (79.30%), Postives = 225/256 (87.89%), Query Frame = 0
BLAST of Csor.00g170910 vs. ExPASy TrEMBL
Match: A0A6J1E7P1 (uncharacterized protein LOC111431489 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431489 PE=4 SV=1) HSP 1 Score: 387 bits (994), Expect = 1.16e-133 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
BLAST of Csor.00g170910 vs. TAIR 10
Match: AT3G17670.1 (tetratricopeptide repeat (TPR)-containing protein ) HSP 1 Score: 251.9 bits (642), Expect = 6.1e-67 Identity = 123/214 (57.48%), Postives = 162/214 (75.70%), Query Frame = 0
BLAST of Csor.00g170910 vs. TAIR 10
Match: AT3G17670.2 (tetratricopeptide repeat (TPR)-containing protein ) HSP 1 Score: 251.9 bits (642), Expect = 6.1e-67 Identity = 123/214 (57.48%), Postives = 162/214 (75.70%), Query Frame = 0
BLAST of Csor.00g170910 vs. TAIR 10
Match: AT1G12270.1 (stress-inducible protein, putative ) HSP 1 Score: 59.7 bits (143), Expect = 4.4e-09 Identity = 31/105 (29.52%), Postives = 54/105 (51.43%), Query Frame = 0
BLAST of Csor.00g170910 vs. TAIR 10
Match: AT4G12400.1 (stress-inducible protein, putative ) HSP 1 Score: 57.4 bits (137), Expect = 2.2e-08 Identity = 32/105 (30.48%), Postives = 51/105 (48.57%), Query Frame = 0
BLAST of Csor.00g170910 vs. TAIR 10
Match: AT4G12400.2 (stress-inducible protein, putative ) HSP 1 Score: 57.4 bits (137), Expect = 2.2e-08 Identity = 32/105 (30.48%), Postives = 51/105 (48.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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