Csor.00g170170 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCTGTTCGCCGACACAACTCCAAAATCTGCAGAGAATTTCCGAGCTCTCTGCATTGGGGAGAAGGAAGGGGATTGGGAGATCCGGAAAGCTTTTACACTACAAAGTCTCAACATTTCACTGTGTAATCCCGAACTTCATGTGCCAAGGAGGAAATTTCACAAGGGGTAATGGAACAGGAGGAGAATCAATCTATGGCATGAAGTTTGCAGATGAAAACTAAAAGATGAAACACACCGGACCAGGTGTACTATCAATGGCGAATTCTGGACAGAAACACCAATGGTTCTCAGTTCTTCATTTGTACTGAGAAGACTTCATGGCTGGATGGGAAGCATGTTGTGTTTGGAAAAGTTGTAGATGGTTATAATGTAGTCAAGGGAGATGGAGAAGGTGGGATCTGA ATGGAGCTGTTCGCCGACACAACTCCAAAATCTGCAGAGAATTTCCGAGCTCTCTGCATTGGGGAGAAGGAAGGGGATTGGGAGATCCGGAAAGCTTTTACACTACAAAGTCTCAACATTTCACTGTGTAATCCCGAACTTCATGTGCCAAGGAGGAAATTTCACAAGGGAAACACCAATGGTTCTCAGTTCTTCATTTGTACTGAGAAGACTTCATGGCTGGATGGGAAGCATGTTGTGTTTGGAAAAGTTGTAGATGGTTATAATGTAGTCAAGGGAGATGGAGAAGGTGGGATCTGA ATGGAGCTGTTCGCCGACACAACTCCAAAATCTGCAGAGAATTTCCGAGCTCTCTGCATTGGGGAGAAGGAAGGGGATTGGGAGATCCGGAAAGCTTTTACACTACAAAGTCTCAACATTTCACTGTGTAATCCCGAACTTCATGTGCCAAGGAGGAAATTTCACAAGGGAAACACCAATGGTTCTCAGTTCTTCATTTGTACTGAGAAGACTTCATGGCTGGATGGGAAGCATGTTGTGTTTGGAAAAGTTGTAGATGGTTATAATGTAGTCAAGGGAGATGGAGAAGGTGGGATCTGA MELFADTTPKSAENFRALCIGEKEGDWEIRKAFTLQSLNISLCNPELHVPRRKFHKGNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKGDGEGGI Homology
BLAST of Csor.00g170170 vs. ExPASy Swiss-Prot
Match: Q38867 (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana OX=3702 GN=CYP19-3 PE=2 SV=2) HSP 1 Score: 97.4 bits (241), Expect = 9.4e-20 Identity = 58/127 (45.67%), Postives = 63/127 (49.61%), Query Frame = 0
BLAST of Csor.00g170170 vs. ExPASy Swiss-Prot
Match: Q38900 (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana OX=3702 GN=CYP19-1 PE=2 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.4e-18 Identity = 57/129 (44.19%), Postives = 68/129 (52.71%), Query Frame = 0
BLAST of Csor.00g170170 vs. ExPASy Swiss-Prot
Match: Q42406 (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana OX=3702 GN=CYP18-4 PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 2.3e-18 Identity = 57/129 (44.19%), Postives = 67/129 (51.94%), Query Frame = 0
BLAST of Csor.00g170170 vs. ExPASy Swiss-Prot
Match: O49886 (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus OX=3873 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.9e-18 Identity = 58/139 (41.73%), Postives = 69/139 (49.64%), Query Frame = 0
BLAST of Csor.00g170170 vs. ExPASy Swiss-Prot
Match: Q8W171 (Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max OX=3847 GN=Cyp1 PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.0e-17 Identity = 56/137 (40.88%), Postives = 64/137 (46.72%), Query Frame = 0
BLAST of Csor.00g170170 vs. NCBI nr
Match: KAG6588313.1 (Peptidyl-prolyl cis-trans isomerase CYP19-3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 210 bits (534), Expect = 1.44e-68 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of Csor.00g170170 vs. NCBI nr
Match: TKR91486.1 (peptidyl-prolyl cis-trans isomerase family protein [Populus alba]) HSP 1 Score: 102 bits (253), Expect = 4.71e-25 Identity = 61/108 (56.48%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of Csor.00g170170 vs. NCBI nr
Match: KAF6136395.1 (hypothetical protein GIB67_000006 [Kingdonia uniflora]) HSP 1 Score: 101 bits (251), Expect = 7.41e-25 Identity = 55/100 (55.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Csor.00g170170 vs. NCBI nr
Match: NP_001077901.1 (rotamase CYP 3 [Arabidopsis thaliana] >AEC06518.1 rotamase CYP 3 [Arabidopsis thaliana]) HSP 1 Score: 100 bits (249), Expect = 1.70e-24 Identity = 58/107 (54.21%), Postives = 69/107 (64.49%), Query Frame = 0
BLAST of Csor.00g170170 vs. NCBI nr
Match: GEX64756.1 (peptidyl-prolyl cis-trans isomerase CYP19-3 [Tanacetum cinerariifolium]) HSP 1 Score: 104 bits (260), Expect = 1.40e-23 Identity = 59/98 (60.20%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of Csor.00g170170 vs. ExPASy TrEMBL
Match: A0A4U5P5G5 (Peptidyl-prolyl cis-trans isomerase OS=Populus alba OX=43335 GN=D5086_0000223050 PE=3 SV=1) HSP 1 Score: 102 bits (253), Expect = 2.28e-25 Identity = 61/108 (56.48%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of Csor.00g170170 vs. ExPASy TrEMBL
Match: A0A7J7L186 (Peptidyl-prolyl cis-trans isomerase OS=Kingdonia uniflora OX=39325 GN=GIB67_000006 PE=3 SV=1) HSP 1 Score: 101 bits (251), Expect = 3.59e-25 Identity = 55/100 (55.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Csor.00g170170 vs. ExPASy TrEMBL
Match: A0A699H9C9 (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Tanacetum cinerariifolium OX=118510 GN=Tci_336731 PE=4 SV=1) HSP 1 Score: 104 bits (260), Expect = 6.77e-24 Identity = 59/98 (60.20%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of Csor.00g170170 vs. ExPASy TrEMBL
Match: A0A6J1DSI0 (Peptidyl-prolyl cis-trans isomerase OS=Momordica charantia OX=3673 GN=LOC111023491 PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.51e-23 Identity = 60/127 (47.24%), Postives = 64/127 (50.39%), Query Frame = 0
BLAST of Csor.00g170170 vs. ExPASy TrEMBL
Match: A0A2I0IBI1 (Peptidyl-prolyl cis-trans isomerase OS=Punica granatum OX=22663 GN=LOC116196726 PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.60e-23 Identity = 59/127 (46.46%), Postives = 65/127 (51.18%), Query Frame = 0
BLAST of Csor.00g170170 vs. TAIR 10
Match: AT2G16600.2 (rotamase CYP 3 ) HSP 1 Score: 104.8 bits (260), Expect = 4.2e-23 Identity = 58/107 (54.21%), Postives = 69/107 (64.49%), Query Frame = 0
BLAST of Csor.00g170170 vs. TAIR 10
Match: AT3G56070.1 (rotamase cyclophilin 2 ) HSP 1 Score: 97.4 bits (241), Expect = 6.7e-21 Identity = 58/127 (45.67%), Postives = 63/127 (49.61%), Query Frame = 0
BLAST of Csor.00g170170 vs. TAIR 10
Match: AT3G56070.2 (rotamase cyclophilin 2 ) HSP 1 Score: 97.4 bits (241), Expect = 6.7e-21 Identity = 58/127 (45.67%), Postives = 63/127 (49.61%), Query Frame = 0
BLAST of Csor.00g170170 vs. TAIR 10
Match: AT2G16600.1 (rotamase CYP 3 ) HSP 1 Score: 93.6 bits (231), Expect = 9.6e-20 Identity = 57/129 (44.19%), Postives = 68/129 (52.71%), Query Frame = 0
BLAST of Csor.00g170170 vs. TAIR 10
Match: AT4G34870.1 (rotamase cyclophilin 5 ) HSP 1 Score: 92.8 bits (229), Expect = 1.6e-19 Identity = 57/129 (44.19%), Postives = 67/129 (51.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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