Csor.00g170160 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGCTTAATAGACTTTGAACAGACGGAGCTCCGCCTTGGCCTCCCCGGCGGCGACGCCGTCAAGAAAAGGGGTTTCACACAAACTTTGGATTTGAAGCTCAATCTCGCGGCGGATTCCGACCAACGCCCTAAAACGACGGACACGAATGCCGTTTCCACCTCCGTCGGTACAGATCTTCCCAAGCCTCCACCGCCCAAGTATTATTCCTTCTCCTTTTTTATTTTATTTTTTTTAATTATTTTTAAATAAAACAATAAAAGCTTTTAAAGCTAAAAGGGTTAGTAAAGTAATTTTATGGGGTTTTTTTTTTAAAATTTTTAAAAGAAAAGGAATTTTAATTAATGCCAATTTCATTACTAATTAAAAAATCAAATATATATGCATTAATTTTTTTTTTAATATAATTTATAATTTATTTAGAGAAAAAATGGAGTTAAAAATTAAAATTATAAATGATAATGTTTTTGTGGGCTTCAATAATTGAGTTGAGAAGAGGAAGAAAGGATGACCAAGTAAACAAAAGGTTATTATTGTGGTTTCGAATTTAAAGGATTTTTATTATTATTATTATTATTATTATTATTATTTACTTATTTTTGTTGTCGGGAAAACATAGGAAAACTACAAAACATTTGGAATCTTTTTTTCTTTTTTTTTTTACATTAAACTACAAATTATTCGTATAATTTTTAAAATAATTACTAATTCTAAGTTTTGAGTTTGTAATTATTCTTTTTTTAGTATTTTCTTTTATAAAAAAAATAATTGTTTTTTCCTAAAAGCATTTTAATTTTCCATAGAGAGTAATTAAGTAATATACTTTTTAAAAAGCATTTTTTTTTTTTTTAATTTTTTAATACTCGAATTTGATTATTATGAACTTATTTTCTTTGGGTTGAATTTAAATAAATAAAAAATTTATGGACTAAGTTGATTTATAGGTTCAATTAAAATTTATTGCTAATTTTAAAAAATACATTTTTATTTACTATATATTATTATTATTTTTTCTCAAATCATTTTTAAATTTTATTTTTAATTGTTTAGAAGGTAACTTTTAATTAAATGTCGGGAAATAAATAAATAAATGTTTACTAAATATCACTTTTTATTAAAGGTTTATTATTTAATAGAAGTTGTTTGAGTTTAAAAAATTTACATTGATTTTTTAAAATTACCCAACTGACAAGCACACGGTTTTTTTTTACTTTTATCATCCTAACTTAACGTTTTAAATGAACTCGTGTCTAAAATAACGGGGTTAAAATTTTTAAAATTTTGAATTTCTACTCTAATTACCTAAATTTGAAATTTTTTACCGTGCTTACCTTTAATTCATATTCATAAATATTATTTAATCTTCCAAAAACGTCTTTTGGCATCACCAAAGGCCAATAATTATCTAATTTCCTTTAAATATAACAATTTGAGATAATGACATGACAATAAAAAGAAAGAATAATAATAATAATATTATTATTATTATTATTAAAAAAAACAATATAAACCCAATTGAAATTAAATACAATTTCCAAAATTATTAACGGTGAAAATTTTATAATATTATTTTTAACAGAGCCCAGGTTGTCGGTTGGCCACCGGTAAAGTCGTTGAGAAGAAACATCGTAGCTCCAAAGACGAGTACAGAGGAAACCGAGAAAGGTGCCACCGTCAGCGGCTGTGCCGATGCGGCGGCGTTTATTAAAGTCAGTATGGACGGTGCACCGTACTTACGAAAAGTGGACATGAAGATGTACGGAAGTTACCAAGAGCTTTCTGATGCCTTGAGCAAAATGTTTGCTTCTTTCACCACCGGTAAAATTCCAACTTACTTTTTTACTTTTACTATCTCGGAATTTGATAGAAAAGTTTGAAATATTGAGTTCAAATGACTCGACAATCTGACTAGCTCGAGCTAACCAACTCAAACCATATAATTTGAGTCCAATTTTTTGAAAATCGAAAACTCGAGTGGGTTAGTAGGTTAAAAATTGAGTTAACCCTACTCTACTTTTAAAATTATTATGGATATATACATTTCTAACCGATATTAGTGATACATTGTGACTTATGAATGAAACGGGTACGGTGGATAAGTAGAATTTTTCAATGAGTTGCTCGGGTCTCCAAATTCGAGATGGTTTAAAAGATTTTCTCAACCCGTGTACACTCCTACAAAATATCAGGTAATTGTGGGACACAAAAGATGAAGAATTACGCGAACGAAAGCAAACCAATGGATGTACGAAACGAGACTGAATACGTGCCTACTTATGAAGACAAAGATGGAGATTGGATGCTCGTGGGCGATGTGCCATGGAAGTAAGTCCTACTCCGCTTATTTGTTTATTTATTTATTTTCTTTAATTAATTATATATTAAAAAAAAATTAATCATTTTTATTGTTTAATTCGACAGTATGTTTGTGGATTCATGCAAACGTTTGAGGATAATGAAAGGATTCAAGGCCATTGGACTCGGTAAGTTAATAAATATTTTGTTATATAATTTGGGATAAAAGTAAATATTTTAAAGTTTAATGCTAAAATTATTATTATTATTTTATATTTTAAATTGATATTTAATAAGTTTACAAATATTATTTGAATTATTTATTTATTTTTGTTTACAAATAAAATTATTTGGATAATGTAAATTAATATATAGATTGTTAATTTTACAGCCCCAAGAGCATTGGAGAAGTGCAAGACCAGAAACTGAATTACTAATATTAGGATATTATTTTTCTTGAATAATAATAATAATAATAGTAATAATAATATTTATTATTATTAGGATTTGGTAGTTTGCAAATAATTTCCAAAAATTATAATAATAATAAAAAAAATGAAACCCTACTCAATAGAGGAAGGAATTTGAATCTCATGTGTAACATATATTTTTTTTTCATGTAATTATTATATAAATGAAATATTTCTCGTGTTTATATATTATATTAATTAATATCTACTGAACTCGTCGGAGTAACTAAACAAGATCGAGTAATTCTAATTTAATTATAGGTTTAGTCGGAAAATTTTTAGATTTGTTTAATTAAAGTTTTTAAATATTTTATTTTATGTCGGGGAGGTTTTTGACACAATTTAATATTTGTTTAATTAACTATCAAGTAAAATAAAATGAGTGTAATAATAGCGTTTTTTTTTTTAATACAATATTGAAATATTTTAAAAATATATATGTATTTAATTTTTTTTAAAAAACAAGATTTTATGAAATATAATTTTAAAAAATTTAAAAATTAAACGATCAAAACACATTATCACTTAATTATAAATAGACGATTAAAAAAAAATTGTAAAAATTTAAAATAGTTTTTTTCCTTTCCCCAGGTCCAATAAAAGAATTAATAGTAACGTGTGGGGTGTAATTTAAATACGAGAAATAAAAGGATGAGGTTGCAAATTTCTTTCTTAAACCCCCCAAAACCCTAATCTCTGCTACTTTATAAATAACAGAGAGTTCTGTGATTTCCATAGCATTTTGGCCTTGGAGATCTGTCCTTCCATCTCCGTCGAAGGTACTTCCTCTCTCTCTCTCCCTGTATCTCGTCGTCGTCTTCTTCTTCTCTGTTGAAGTATTTTATTTTTCCCTAGAAATTGAGATTGTTGGATCTGCAAAAGCACATATCGAAGGTTTTCAGGTTCATTTCATAAATGCCTGCTTAGCTCAAAATTTGTGCGATATTATTTGCTTGTCTATGGCTCTCCTTAGTACGTCCTTTGGAGTCTAAGGCCGGCTTTGTGTCCGGCCTCCAGGGGATTTGGGAGTCATGACGAACATTTGCTTATTTCTCTTCCAACTTTTATTCATGGGGTTTTTCTTCAGTTTCTTTTTTAGATTGTTGTATTAAGATGGAGATGTAGGGAGATTCTATTAATTGTTTCATTTTTTATTGTTAATGCTTGTCAATATGATTTAGATTGTTAGTATTTATTAAGAGTGTCGTAAGCTGCACGTATCTGTAGGTTTTAGTTTGATTTTTTTTTTCTCTGGATTCCGGCGTAGCTAGCAAGAGTAATGGGGAAAATACGGTTGTTTACTGGTAAATGGTCTTTGTAAGGACGGATTTTCAAGGAATCAGTTCTGAAATATGCGATCTAATGGGGAATTGTGTTTTCAAGACACTCGTACTAGTCAAACATGTCTTGTATACAAATATCATAATTGAGCTTCGAAGAATATCAAGGAAATTGTGGATTAGGTGAACGTTTTTGTACCAAGGAAATTGTGCGTAACAAGATTATTAACTTACTAAGAACTATGCGAACTTGACATCATTCTTGAAATCTCCATATTTTTGTGTTTTATCTTTTGAAGCATCTGTAAGCTAAGGATTTTGATTTGACAGAGTGTATTGGCAGAGAACGATGTCGAACCCAAAAGTATTCTTTGATATTTTGA ATGGGAAGCTTAATAGACTTTGAACAGACGGAGCTCCGCCTTGGCCTCCCCGGCGGCGACGCCGTCAAGAAAAGGGGTTTCACACAAACTTTGGATTTGAAGCTCAATCTCGCGGCGGATTCCGACCAACGCCCTAAAACGACGGACACGAATGCCGTTTCCACCTCCGTCGGTACAGATCTTCCCAAGCCTCCACCGCCCAAAGCCCAGGTTGTCGGTTGGCCACCGGTAAAGTCGTTGAGAAGAAACATCGTAGCTCCAAAGACGAGTACAGAGGAAACCGAGAAAGGTGCCACCGTCAGCGGCTGTGCCGATGCGGCGGCGTTTATTAAAGTCAGTATGGACGGTGCACCGTACTTACGAAAAGTGGACATGAAGATGTACGGAAGTTACCAAGAGCTTTCTGATGCCTTGAGCAAAATGTTTGCTTCTTTCACCACCGGTAATTGTGGGACACAAAAGATGAAGAATTACGCGAACGAAAGCAAACCAATGGATGTACGAAACGAGACTGAATACGTGCCTACTTATGAAGACAAAGATGGAGATTGGATGCTCGTGGGCGATGTGCCATGGAATATGTTTGTGGATTCATGCAAACGTTTGAGGATAATGAAAGGATTCAAGGCCATTGGACTCGCCCCAAGAGCATTGGAGAAAGAGTTCTGTGATTTCCATAGCATTTTGGCCTTGGAGATCTGTCCTTCCATCTCCGTCGAAGAGTGTATTGGCAGAGAACGATGTCGAACCCAAAAGTATTCTTTGATATTTTGA ATGGGAAGCTTAATAGACTTTGAACAGACGGAGCTCCGCCTTGGCCTCCCCGGCGGCGACGCCGTCAAGAAAAGGGGTTTCACACAAACTTTGGATTTGAAGCTCAATCTCGCGGCGGATTCCGACCAACGCCCTAAAACGACGGACACGAATGCCGTTTCCACCTCCGTCGGTACAGATCTTCCCAAGCCTCCACCGCCCAAAGCCCAGGTTGTCGGTTGGCCACCGGTAAAGTCGTTGAGAAGAAACATCGTAGCTCCAAAGACGAGTACAGAGGAAACCGAGAAAGGTGCCACCGTCAGCGGCTGTGCCGATGCGGCGGCGTTTATTAAAGTCAGTATGGACGGTGCACCGTACTTACGAAAAGTGGACATGAAGATGTACGGAAGTTACCAAGAGCTTTCTGATGCCTTGAGCAAAATGTTTGCTTCTTTCACCACCGGTAATTGTGGGACACAAAAGATGAAGAATTACGCGAACGAAAGCAAACCAATGGATGTACGAAACGAGACTGAATACGTGCCTACTTATGAAGACAAAGATGGAGATTGGATGCTCGTGGGCGATGTGCCATGGAATATGTTTGTGGATTCATGCAAACGTTTGAGGATAATGAAAGGATTCAAGGCCATTGGACTCGCCCCAAGAGCATTGGAGAAAGAGTTCTGTGATTTCCATAGCATTTTGGCCTTGGAGATCTGTCCTTCCATCTCCGTCGAAGAGTGTATTGGCAGAGAACGATGTCGAACCCAAAAGTATTCTTTGATATTTTGA MGSLIDFEQTELRLGLPGGDAVKKRGFTQTLDLKLNLAADSDQRPKTTDTNAVSTSVGTDLPKPPPPKAQVVGWPPVKSLRRNIVAPKTSTEETEKGATVSGCADAAAFIKVSMDGAPYLRKVDMKMYGSYQELSDALSKMFASFTTGNCGTQKMKNYANESKPMDVRNETEYVPTYEDKDGDWMLVGDVPWNMFVDSCKRLRIMKGFKAIGLAPRALEKEFCDFHSILALEICPSISVEECIGRERCRTQKYSLIF Homology
BLAST of Csor.00g170160 vs. ExPASy Swiss-Prot
Match: O24407 (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 8.5e-65 Identity = 139/236 (58.90%), Postives = 173/236 (73.31%), Query Frame = 0
BLAST of Csor.00g170160 vs. ExPASy Swiss-Prot
Match: Q38825 (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 2.1e-63 Identity = 133/236 (56.36%), Postives = 169/236 (71.61%), Query Frame = 0
BLAST of Csor.00g170160 vs. ExPASy Swiss-Prot
Match: Q38832 (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=2) HSP 1 Score: 242.7 bits (618), Expect = 4.7e-63 Identity = 127/226 (56.19%), Postives = 158/226 (69.91%), Query Frame = 0
BLAST of Csor.00g170160 vs. ExPASy Swiss-Prot
Match: P13089 (Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 2.8e-60 Identity = 134/242 (55.37%), Postives = 166/242 (68.60%), Query Frame = 0
BLAST of Csor.00g170160 vs. ExPASy Swiss-Prot
Match: P0C132 (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 4.8e-60 Identity = 142/273 (52.01%), Postives = 166/273 (60.81%), Query Frame = 0
BLAST of Csor.00g170160 vs. NCBI nr
Match: KAG6588312.1 (Auxin-responsive protein IAA14, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 521 bits (1342), Expect = 1.38e-186 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0
BLAST of Csor.00g170160 vs. NCBI nr
Match: KAG7020874.1 (Auxin-responsive protein IAA14 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 433 bits (1113), Expect = 8.01e-152 Identity = 215/229 (93.89%), Postives = 218/229 (95.20%), Query Frame = 0
BLAST of Csor.00g170160 vs. NCBI nr
Match: XP_022925407.1 (auxin-responsive protein IAA16-like [Cucurbita moschata]) HSP 1 Score: 429 bits (1104), Expect = 8.22e-151 Identity = 213/220 (96.82%), Postives = 216/220 (98.18%), Query Frame = 0
BLAST of Csor.00g170160 vs. NCBI nr
Match: XP_023531478.1 (auxin-responsive protein IAA16-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 425 bits (1092), Expect = 5.54e-149 Identity = 212/220 (96.36%), Postives = 214/220 (97.27%), Query Frame = 0
BLAST of Csor.00g170160 vs. NCBI nr
Match: XP_022965557.1 (auxin-responsive protein IAA16-like [Cucurbita maxima]) HSP 1 Score: 410 bits (1054), Expect = 3.42e-143 Identity = 204/220 (92.73%), Postives = 209/220 (95.00%), Query Frame = 0
BLAST of Csor.00g170160 vs. ExPASy TrEMBL
Match: A0A6J1EBM0 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111432705 PE=3 SV=1) HSP 1 Score: 429 bits (1104), Expect = 3.98e-151 Identity = 213/220 (96.82%), Postives = 216/220 (98.18%), Query Frame = 0
BLAST of Csor.00g170160 vs. ExPASy TrEMBL
Match: A0A6J1HKM9 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111465422 PE=3 SV=1) HSP 1 Score: 410 bits (1054), Expect = 1.65e-143 Identity = 204/220 (92.73%), Postives = 209/220 (95.00%), Query Frame = 0
BLAST of Csor.00g170160 vs. ExPASy TrEMBL
Match: A0A6J1DM34 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111022235 PE=3 SV=1) HSP 1 Score: 338 bits (866), Expect = 8.67e-115 Identity = 175/228 (76.75%), Postives = 192/228 (84.21%), Query Frame = 0
BLAST of Csor.00g170160 vs. ExPASy TrEMBL
Match: A0A0A0M3H6 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G690240 PE=3 SV=1) HSP 1 Score: 338 bits (866), Expect = 1.03e-114 Identity = 175/231 (75.76%), Postives = 192/231 (83.12%), Query Frame = 0
BLAST of Csor.00g170160 vs. ExPASy TrEMBL
Match: A0A5D3DYV0 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001320 PE=3 SV=1) HSP 1 Score: 326 bits (835), Expect = 4.67e-110 Identity = 165/227 (72.69%), Postives = 186/227 (81.94%), Query Frame = 0
BLAST of Csor.00g170160 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 ) HSP 1 Score: 248.4 bits (633), Expect = 6.1e-66 Identity = 139/236 (58.90%), Postives = 173/236 (73.31%), Query Frame = 0
BLAST of Csor.00g170160 vs. TAIR 10
Match: AT3G23050.1 (indole-3-acetic acid 7 ) HSP 1 Score: 243.8 bits (621), Expect = 1.5e-64 Identity = 133/236 (56.36%), Postives = 169/236 (71.61%), Query Frame = 0
BLAST of Csor.00g170160 vs. TAIR 10
Match: AT4G14550.1 (indole-3-acetic acid inducible 14 ) HSP 1 Score: 242.7 bits (618), Expect = 3.3e-64 Identity = 127/226 (56.19%), Postives = 158/226 (69.91%), Query Frame = 0
BLAST of Csor.00g170160 vs. TAIR 10
Match: AT1G04250.1 (AUX/IAA transcriptional regulator family protein ) HSP 1 Score: 231.9 bits (590), Expect = 5.9e-61 Identity = 129/232 (55.60%), Postives = 165/232 (71.12%), Query Frame = 0
BLAST of Csor.00g170160 vs. TAIR 10
Match: AT3G23050.2 (indole-3-acetic acid 7 ) HSP 1 Score: 197.2 bits (500), Expect = 1.6e-50 Identity = 111/208 (53.37%), Postives = 143/208 (68.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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