Csor.00g169340 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g169340
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	nuclear inhibitor of protein phosphatase 1
Location	Csor_Chr18: 8279404 .. 8280541 (+)
RNA-Seq Expression	Csor.00g169340
Synteny	Csor.00g169340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGTTAAAGAAGGAAGTCTAGTTGGAAAATATGAGTCTCTTGTACAGACTACCATAATACCTAAAGGCAAGGAGCAGTCTTCTTTGAGGGGAGATAACATTTTTCCAAAAGGCGTGACTGGTAAATTACAAGAAATCTTGAATAGGGTAAAAAATCCATCGAAAAGTGAAATATATGATGACCTTTATGGAGAATCATTTTCGGGAAATGTGGGTACGTCGTGGGCATATTCTCCTAGTACTGCTAATAACCCGTCTTCCCCTCCTAAAGACTTGATTGGTAAAGCTTCAAGTGGGAACCATGAAGTAGATAACAGGACCAATATGAATAATGACAGTGATGATGATTTGTTTGGTAATTGATCATAATGAGCTGAATGATTGTGGAAGTCTGTAGTTTTCTGTCGTGACAAAAGGGTTGTTGATCAAGGCTACAGGAATTCTTTGCATATGGATAATTTTTTCCTTTTGAAATGTAACTGAGGACTTTAAGTTGATGCATTTCATCAGGAATTCTTCTTTGGTAATTGGACGCCTTACCAAGGGGCACGTGTAGAACTGAACATAATATTTGAAACTCTGGCTTCACAAGTGTATACAGTAGAAATTGAGGAAATGAGAAGAAAATGGATGCGTGTCGCCTGTATGGTTGGTTGTTGAGGCTGTTCTCGTGAAGGTTCGAACCCCCCCCCCCCCCCCCAAATCCCTTTTCCAATCTAGCCTAAAATAATAGTTCTTTTTGCATCCAGTTTGTCATCTATTGTTTGTAAGGTTCTGTTTGTTTTAACTCTTCGGATAATGAAAAGTGATCTATAGTAGGAAAAGAGATTCCAACAACATTTCCAAGTGATAGTGCACTTGTACTGAAAAAATAATTCAAGATTATTCCTAAATTAGAAGATTACTTTGGAATGAAAACACTGTTGTGCTACTGTTACTCTAGCAGATTCGAGTCGAGTTAAAGGGATAGCTTAATTATTACTTTTGCTTGGCTACGCACAAAAATGATTTTTATGCTACTGTTACTCCTATATTATTCATTACATGAGAATGCTATATACTGTTACTTAATTATTACGTCTAGTGATTCTCCTTTTGACAGAATGACAAGATTTGCCGGCTACAAAAGATATGA

mRNA sequence

ATGGGGGTTAAAGAAGGAAGTCTAGTTGGAAAATATGAGTCTCTTGTACAGACTACCATAATACCTAAAGGCAAGGAGCAGTCTTCTTTGAGGGGAGATAACATTTTTCCAAAAGGCGTGACTGGTAAATTACAAGAAATCTTGAATAGGGTAAAAAATCCATCGAAAAGTGAAATATATGATGACCTTTATGGAGAATCATTTTCGGGAAATGTGGGTACGTCGTGGGCATATTCTCCTAGTACTGCTAATAACCCGTCTTCCCCTCCTAAAGACTTGATTGGTAAAGCTTCAAGTGGGAACCATGAAGTAGATAACAGGACCAATATGAATAATGACAGTGATGATGATTTGTTTGAAAATGGATGCGTGTCGCCTGTATGGTTGGTTGTTGAGGCTGTTCTCGTGAAGAATGACAAGATTTGCCGGCTACAAAAGATATGA

Coding sequence (CDS)

ATGGGGGTTAAAGAAGGAAGTCTAGTTGGAAAATATGAGTCTCTTGTACAGACTACCATAATACCTAAAGGCAAGGAGCAGTCTTCTTTGAGGGGAGATAACATTTTTCCAAAAGGCGTGACTGGTAAATTACAAGAAATCTTGAATAGGGTAAAAAATCCATCGAAAAGTGAAATATATGATGACCTTTATGGAGAATCATTTTCGGGAAATGTGGGTACGTCGTGGGCATATTCTCCTAGTACTGCTAATAACCCGTCTTCCCCTCCTAAAGACTTGATTGGTAAAGCTTCAAGTGGGAACCATGAAGTAGATAACAGGACCAATATGAATAATGACAGTGATGATGATTTGTTTGAAAATGGATGCGTGTCGCCTGTATGGTTGGTTGTTGAGGCTGTTCTCGTGAAGAATGACAAGATTTGCCGGCTACAAAAGATATGA

Protein sequence

MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIYDDLYGESFSGNVGTSWAYSPSTANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDDLFENGCVSPVWLVVEAVLVKNDKICRLQKI

Homology

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BLAST of Csor.00g169340 vs. ExPASy Swiss-Prot
Match: Q9FIK2 (Protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g47790 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.1e-14
Identity = 43/78 (55.13%), Postives = 53/78 (67.95%), Query Frame = 0


Query: 1   MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY 60
           + VKEGSLVGKYESLV+ T+IPKGK +           GVT +LQE +N +K   K+ IY
Sbjct: 266 INVKEGSLVGKYESLVRVTLIPKGKVKEEKAFTGGTRGGVTDRLQEAMNMLKRGPKTGIY 325

Query: 61  DDLY-GESFSGNVGTSWA 78
           DDLY G+S +  VGTSWA
Sbjct: 326 DDLYGGDSLAKAVGTSWA 343

[Close]

BLAST of Csor.00g169340 vs. NCBI nr
Match: KAG6573577.1 (Protein phosphatase 1 regulatory inhibitor subunit PPP1R8-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 294 bits (753), Expect = 2.00e-100
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY 60
           MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY
Sbjct: 1   MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY 60

Query: 61  DDLYGESFSGNVGTSWAYSPSTANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDDLFE 120
           DDLYGESFSGNVGTSWAYSPSTANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDDLFE
Sbjct: 61  DDLYGESFSGNVGTSWAYSPSTANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDDLFE 120

Query: 121 NGCVSPVWLVVEAVLVKNDKICRLQKI 147
           NGCVSPVWLVVEAVLVKNDKICRLQKI
Sbjct: 121 NGCVSPVWLVVEAVLVKNDKICRLQKI 147

[Close]

BLAST of Csor.00g169340 vs. NCBI nr
Match: KAG7012674.1 (hypothetical protein SDJN02_25427, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238 bits (606), Expect = 2.04e-78
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY 60
           MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY
Sbjct: 1   MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY 60

Query: 61  DDLYGESFSGNVGTSWAYSPSTANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDDLF 119
           DDLYGESFSGNVGTSWAYSPSTANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDDLF
Sbjct: 61  DDLYGESFSGNVGTSWAYSPSTANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDDLF 119

[Close]

BLAST of Csor.00g169340 vs. NCBI nr
Match: XP_022142477.1 (nuclear inhibitor of protein phosphatase 1 [Momordica charantia])

HSP 1 Score: 201 bits (510), Expect = 8.57e-60
Identity = 103/122 (84.43%), Postives = 110/122 (90.16%), Query Frame = 0


Query: 1   MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY 60
           +GVKEGSLVGKYESLVQTTIIP+GKEQSSLRGD I PKGVTGKLQEILNRVKNPSK  +Y
Sbjct: 311 IGVKEGSLVGKYESLVQTTIIPRGKEQSSLRGDGISPKGVTGKLQEILNRVKNPSKGGMY 370

Query: 61  DDLYGESFSGNVGTSWAYSPS-TANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDDLF 120
           DDLYGESFSGNVG+SWAYS + TAN P SPP D IGKASSGNHE +NRTN+NNDSDDDLF
Sbjct: 371 DDLYGESFSGNVGSSWAYSSAVTANKPPSPPNDSIGKASSGNHEENNRTNINNDSDDDLF 430

[Close]

BLAST of Csor.00g169340 vs. NCBI nr
Match: XP_023519780.1 (protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 197 bits (502), Expect = 1.25e-58
Identity = 106/122 (86.89%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 1   MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY 60
           +GVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNI PKGVTGKLQEILNRVKNPSKS IY
Sbjct: 309 IGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNICPKGVTGKLQEILNRVKNPSKSGIY 368

Query: 61  DDLYGESFSGNVGTSWAYSPS-TANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDDLF 120
           DDLYGESFSGNVG+SWAYS S TAN PSSPPK  IGKAS+ NHE +NRTN+N DSDDDLF
Sbjct: 369 DDLYGESFSGNVGSSWAYSSSGTANKPSSPPKVSIGKASTENHEENNRTNIN-DSDDDLF 428

[Close]

BLAST of Csor.00g169340 vs. NCBI nr
Match: XP_022973135.1 (protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog [Cucurbita maxima])

HSP 1 Score: 196 bits (498), Expect = 4.95e-58
Identity = 105/122 (86.07%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 1   MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY 60
           +GVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNI PKGVTGKLQEILNRVKNPSKS IY
Sbjct: 309 IGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNICPKGVTGKLQEILNRVKNPSKSGIY 368

Query: 61  DDLYGESFSGNVGTSWAYSPS-TANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDDLF 120
           DDLYGESFSGNVG+SWAYS S TAN PSSPP+  IGKAS+ NHE +NRTN+N DSDDDLF
Sbjct: 369 DDLYGESFSGNVGSSWAYSSSGTANKPSSPPEVSIGKASTENHEENNRTNIN-DSDDDLF 428

[Close]

BLAST of Csor.00g169340 vs. ExPASy TrEMBL
Match: A0A6J1CMW0 (nuclear inhibitor of protein phosphatase 1 OS=Momordica charantia OX=3673 GN=LOC111012590 PE=4 SV=1)

HSP 1 Score: 201 bits (510), Expect = 4.15e-60
Identity = 103/122 (84.43%), Postives = 110/122 (90.16%), Query Frame = 0


Query: 1   MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY 60
           +GVKEGSLVGKYESLVQTTIIP+GKEQSSLRGD I PKGVTGKLQEILNRVKNPSK  +Y
Sbjct: 311 IGVKEGSLVGKYESLVQTTIIPRGKEQSSLRGDGISPKGVTGKLQEILNRVKNPSKGGMY 370

Query: 61  DDLYGESFSGNVGTSWAYSPS-TANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDDLF 120
           DDLYGESFSGNVG+SWAYS + TAN P SPP D IGKASSGNHE +NRTN+NNDSDDDLF
Sbjct: 371 DDLYGESFSGNVGSSWAYSSAVTANKPPSPPNDSIGKASSGNHEENNRTNINNDSDDDLF 430

[Close]

BLAST of Csor.00g169340 vs. ExPASy TrEMBL
Match: A0A6J1IAL0 (protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog OS=Cucurbita maxima OX=3661 GN=LOC111471653 PE=4 SV=1)

HSP 1 Score: 196 bits (498), Expect = 2.39e-58
Identity = 105/122 (86.07%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 1   MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY 60
           +GVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNI PKGVTGKLQEILNRVKNPSKS IY
Sbjct: 309 IGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNICPKGVTGKLQEILNRVKNPSKSGIY 368

Query: 61  DDLYGESFSGNVGTSWAYSPS-TANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDDLF 120
           DDLYGESFSGNVG+SWAYS S TAN PSSPP+  IGKAS+ NHE +NRTN+N DSDDDLF
Sbjct: 369 DDLYGESFSGNVGSSWAYSSSGTANKPSSPPEVSIGKASTENHEENNRTNIN-DSDDDLF 428

[Close]

BLAST of Csor.00g169340 vs. ExPASy TrEMBL
Match: A0A6J1EGU4 (protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog OS=Cucurbita moschata OX=3662 GN=LOC111434071 PE=4 SV=1)

HSP 1 Score: 196 bits (497), Expect = 3.38e-58
Identity = 105/122 (86.07%), Postives = 110/122 (90.16%), Query Frame = 0


Query: 1   MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY 60
           +GVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNI PKGVTGKLQEILNRVKNPSKS IY
Sbjct: 309 IGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNICPKGVTGKLQEILNRVKNPSKSGIY 368

Query: 61  DDLYGESFSGNVGTSWAYSPS-TANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDDLF 120
           DDLYGESFSGNVG+SWAYS S TAN PSSPPK  IGKAS+ NHE +NR N+N DSDDDLF
Sbjct: 369 DDLYGESFSGNVGSSWAYSSSGTANKPSSPPKVSIGKASTENHEENNRANIN-DSDDDLF 428

[Close]

BLAST of Csor.00g169340 vs. ExPASy TrEMBL
Match: A0A0A0LVY0 (FHA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G170010 PE=4 SV=1)

HSP 1 Score: 181 bits (460), Expect = 1.03e-52
Identity = 99/122 (81.15%), Postives = 106/122 (86.89%), Query Frame = 0


Query: 1   MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY 60
           +GVKEGSLVGKYESLVQTTIIPKGKE SSLRGDNI PKGVTGKLQEILNRVKNPSKS +Y
Sbjct: 310 IGVKEGSLVGKYESLVQTTIIPKGKEPSSLRGDNISPKGVTGKLQEILNRVKNPSKSGVY 369

Query: 61  DDLYGESFSGNVGTSWAYSPS-TANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDDLF 120
           DDLYGESFSGNVG+SWAYS + +AN  SSPPKDLI +    NHE +NRTN N DSDDDLF
Sbjct: 370 DDLYGESFSGNVGSSWAYSSAGSANKLSSPPKDLIPR----NHEENNRTNTN-DSDDDLF 426

[Close]

BLAST of Csor.00g169340 vs. ExPASy TrEMBL
Match: A0A5D3CKG3 (Nuclear inhibitor of protein phosphatase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001890 PE=4 SV=1)

HSP 1 Score: 170 bits (430), Expect = 9.66e-50
Identity = 94/122 (77.05%), Postives = 103/122 (84.43%), Query Frame = 0


Query: 1   MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY 60
           +GVKEGSLVGKYESLVQTTIIPKGKE  SLRG+NI PKGVTGKLQEILNRVKNPSK+ +Y
Sbjct: 169 IGVKEGSLVGKYESLVQTTIIPKGKEPFSLRGENISPKGVTGKLQEILNRVKNPSKTGVY 228

Query: 61  DDLYGESFSGNVGTSWAYSPS-TANNPSSPPKDLIGKASSGNHEVDNRTNMNNDSDDDLF 120
           DDLYGESFSGNVG+SWAYS + +AN  SSPPKDLI +      E +NRTN N DSDDDLF
Sbjct: 229 DDLYGESFSGNVGSSWAYSSAGSANRLSSPPKDLITRKL----EDNNRTNTN-DSDDDLF 285

[Close]

BLAST of Csor.00g169340 vs. TAIR 10
Match: AT5G47790.1 (SMAD/FHA domain-containing protein )

HSP 1 Score: 79.0 bits (193), Expect = 3.6e-15
Identity = 43/78 (55.13%), Postives = 53/78 (67.95%), Query Frame = 0


Query: 1   MGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNIFPKGVTGKLQEILNRVKNPSKSEIY 60
           + VKEGSLVGKYESLV+ T+IPKGK +           GVT +LQE +N +K   K+ IY
Sbjct: 266 INVKEGSLVGKYESLVRVTLIPKGKVKEEKAFTGGTRGGVTDRLQEAMNMLKRGPKTGIY 325

Query: 61  DDLY-GESFSGNVGTSWA 78
           DDLY G+S +  VGTSWA
Sbjct: 326 DDLYGGDSLAKAVGTSWA 343

The following BLAST results are available for this feature:

BLAST of Csor.00g169340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIK2	5.1e-14	55.13	Protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog OS=Arabidopsis...	[more]

BLAST of Csor.00g169340 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573577.1	2.00e-100	100.00	Protein phosphatase 1 regulatory inhibitor subunit PPP1R8-like protein, partial ...	[more]
KAG7012674.1	2.04e-78	100.00	hypothetical protein SDJN02_25427, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022142477.1	8.57e-60	84.43	nuclear inhibitor of protein phosphatase 1 [Momordica charantia]	[more]
XP_023519780.1	1.25e-58	86.89	protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog [Cucurbita pep...	[more]
XP_022973135.1	4.95e-58	86.07	protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog [Cucurbita max...	[more]

BLAST of Csor.00g169340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CMW0	4.15e-60	84.43	nuclear inhibitor of protein phosphatase 1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1IAL0	2.39e-58	86.07	protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog OS=Cucurbita m...	[more]
A0A6J1EGU4	3.38e-58	86.07	protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog OS=Cucurbita m...	[more]
A0A0A0LVY0	1.03e-52	81.15	FHA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G170010 PE=4 SV...	[more]
A0A5D3CKG3	9.66e-50	77.05	Nuclear inhibitor of protein phosphatase 1 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Csor.00g169340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47790.1	3.6e-15	55.13	SMAD/FHA domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..113
None	No IPR available	PANTHER	PTHR23308:SF60	NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE 1-LIKE	coord: 1..119
None	No IPR available	PANTHER	PTHR23308	NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1	coord: 1..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g169340.m01	Csor.00g169340.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0004674	protein serine/threonine kinase activity