Csor.00g168390 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g168390
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-type domain-containing protein
Location	Csor_Chr18: 9284396 .. 9285537 (+)
RNA-Seq Expression	Csor.00g168390
Synteny	Csor.00g168390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTATCAGCTCGAGAAATTCTCTCATCACGATTCTTTACAAGTCTTGGAAGCCGATATTCAATATGCAAATTCTCTGTAAGTTTTGTTCGTTTTCCCTTTCAATCATGATGATTGACGATTTCTGAAAGGGTTTACGGATTTTTAGGTTTTTGATTCTGTTCTTCGTTTGATTTTTGGGTTTTTAGGGCGGCGGCGATCCCCATGGCTAAAGAGGGCGCCTATCTTCAAATGAAATTGGTTTATAATCATTTAGCTCCCATTGTTTTGTTCTTGCTTCAATGGATGGATTGTTCTTGCTCATGCTTGTTTCCCAGATATTTAAGCCTCTTCCACATACTTGTGTACAAGGTTTGTAGGGTTCTTGTAATTGTTAGCCATTAGATGATTATAGAAAGCTATCTTGTTCTTGAGCTTGCTATCTAATTCAGGTATATCCAGAGGGAAAACAAAAACGAAGTATATCTAGACATGGAAGGAAGGCAACCATTAGGGAATTCTATGGTACTGAATTGTTTAGTTTAGCTAATTAGCTGCTGTTCTTTCAATTGTGAGTAGTTCTGAGTGTTCTGATCTTGTTTCGAATATCAGCTATAATATTGCCATCGCTTCAGCGAATCCACGGTAGCTTGGATAAGCTGGATGATTGTAAGGAAGAGTGCCATTGGATTGAGATGCCGAGCAAGAAGAGAGGCGATAAAGATGTTAGACTCACGAACGTAGATACGAAGCGAGAAGACGAATGTGGTATTTGCTTGGAGCCGTGCACGAAGATGGTTTTACCGAATTGTTGTCATGCAATGTGCATCAAATGCTATCGAAATTGGTAAAAAAAAACGAGTCTTATTATGCATCTTCGTTGTGTATGAAGCATTTTGAAGTGTGTTGTTTGTGTGTGTTCAAATGCTTGTTTGTCTCCTACATTACAGGAACACGAGGTCGGAGTCCTGCCCGTTTTGTCGTGGCAGCTTGAAGAGAGTCAACTCGGAGGACTTATGGGTGCTCACTTGTAGTGATGATGTGGTTGATGCCGAAACCGTTTCGAAGGAGGACACGTTGCGCTTCCATCGCTATATAAACAGCTTGCCAAAAGACTATCCGGACGCGCTGTTCGTAGTATATTCTGAATATCTATTCTAG

mRNA sequence

ATGTATTATCAGCTCGAGAAATTCTCTCATCACGATTCTTTACAAGTCTTGGAAGCCGATATTCAATATGCAAATTCTCTGGCGGCGGCGATCCCCATGGCTAAAGAGGGCGCCTATCTTCAAATGAAATTGGTTTATAATCATTTAGCTCCCATTGTTTTGTTCTTGCTTCAATGGATGGATTGTTCTTGCTCATGCTTGTTTCCCAGATATTTAAGCCTCTTCCACATACTTGTGTACAAGGTATATCCAGAGGGAAAACAAAAACGAAGTATATCTAGACATGGAAGGAAGGCAACCATTAGGGAATTCTATGCTATAATATTGCCATCGCTTCAGCGAATCCACGGTAGCTTGGATAAGCTGGATGATTGTAAGGAAGAGTGCCATTGGATTGAGATGCCGAGCAAGAAGAGAGGCGATAAAGATGTTAGACTCACGAACGTAGATACGAAGCGAGAAGACGAATGTGGTATTTGCTTGGAGCCGTGCACGAAGATGGTTTTACCGAATTGTTGTCATGCAATGTGCATCAAATGCTATCGAAATTGGAACACGAGGTCGGAGTCCTGCCCGTTTTGTCGTGGCAGCTTGAAGAGAGTCAACTCGGAGGACTTATGGGTGCTCACTTGTAGTGATGATGTGGTTGATGCCGAAACCGTTTCGAAGGAGGACACGTTGCGCTTCCATCGCTATATAAACAGCTTGCCAAAAGACTATCCGGACGCGCTGTTCGTAGTATATTCTGAATATCTATTCTAG

Coding sequence (CDS)

ATGTATTATCAGCTCGAGAAATTCTCTCATCACGATTCTTTACAAGTCTTGGAAGCCGATATTCAATATGCAAATTCTCTGGCGGCGGCGATCCCCATGGCTAAAGAGGGCGCCTATCTTCAAATGAAATTGGTTTATAATCATTTAGCTCCCATTGTTTTGTTCTTGCTTCAATGGATGGATTGTTCTTGCTCATGCTTGTTTCCCAGATATTTAAGCCTCTTCCACATACTTGTGTACAAGGTATATCCAGAGGGAAAACAAAAACGAAGTATATCTAGACATGGAAGGAAGGCAACCATTAGGGAATTCTATGCTATAATATTGCCATCGCTTCAGCGAATCCACGGTAGCTTGGATAAGCTGGATGATTGTAAGGAAGAGTGCCATTGGATTGAGATGCCGAGCAAGAAGAGAGGCGATAAAGATGTTAGACTCACGAACGTAGATACGAAGCGAGAAGACGAATGTGGTATTTGCTTGGAGCCGTGCACGAAGATGGTTTTACCGAATTGTTGTCATGCAATGTGCATCAAATGCTATCGAAATTGGAACACGAGGTCGGAGTCCTGCCCGTTTTGTCGTGGCAGCTTGAAGAGAGTCAACTCGGAGGACTTATGGGTGCTCACTTGTAGTGATGATGTGGTTGATGCCGAAACCGTTTCGAAGGAGGACACGTTGCGCTTCCATCGCTATATAAACAGCTTGCCAAAAGACTATCCGGACGCGCTGTTCGTAGTATATTCTGAATATCTATTCTAG

Protein sequence

MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWMDCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLDKLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDYPDALFVVYSEYLF

Homology

[Close]

BLAST of Csor.00g168390 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.7e-57
Identity = 114/241 (47.30%), Postives = 155/241 (64.32%), Query Frame = 0


Query: 9   SHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWMDCSCSCLF 68
           S  DSL+ LEADIQ+AN+LA+  P   +G Y+QM+L Y+  A + LFLLQW DC     F
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH----F 63

Query: 69  PRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLDKLDDCKEE 128
              L L  IL+YK Y +G  K ++S H RK +IREFY ++ PSL ++HG +  +++ K++
Sbjct: 64  AGALGLLRILIYKAYVDG--KTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 123

Query: 129 CHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTRS 188
               +   KK      +++ +D +RE+ECGICLE   K+VLP C H+MCI CYRNW  RS
Sbjct: 124 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARS 183

Query: 189 ESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDYPDALFVVY 248
           +SCPFCRGSLKRVNS DLW+ TCS ++ D   + KE+  R   YI+ LP    D   V Y
Sbjct: 184 QSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 238

Query: 249 S 250
           +
Sbjct: 244 A 238

[Close]

BLAST of Csor.00g168390 vs. ExPASy Swiss-Prot
Match: Q4VBT5 (Probable E3 ubiquitin-protein ligase makorin-1 OS=Danio rerio OX=7955 GN=mkrn1 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.7e-04
Identity = 25/85 (29.41%), Postives = 41/85 (48.24%), Query Frame = 0


Query: 141 DKDVRLT-NVDTKREDECGICLE-------PCTKM--VLPNCCHAMCIKCYRNWNTRSE- 200
           +KD+ ++  +   ++  CG+C+E       P  +   +L NCCH  C+KC R W +  + 
Sbjct: 219 EKDMEISFAIQRSKDMMCGVCMEVVFEKTNPSERRFGILSNCCHCYCLKCIRKWRSAKQF 278

Query: 201 ------SCPFCRGSLKRVNSEDLWV 209
                 SCP CR +   V   + WV
Sbjct: 279 ESKIIKSCPECRITSNFVIPSEYWV 303

[Close]

BLAST of Csor.00g168390 vs. NCBI nr
Match: KAG6573671.1 (E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 528 bits (1361), Expect = 1.28e-189
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120
           DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240

Query: 241 PDALFVVYSEYLF 253
           PDALFVVYSEYLF
Sbjct: 241 PDALFVVYSEYLF 253

[Close]

BLAST of Csor.00g168390 vs. NCBI nr
Match: XP_023542538.1 (RING-H2 finger protein ATL47-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 528 bits (1361), Expect = 1.33e-189
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM
Sbjct: 2   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 61

Query: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120
           DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD
Sbjct: 62  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 121

Query: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 122 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 181

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY
Sbjct: 182 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 241

Query: 241 PDALFVVYSEYLF 253
           PDALFVVYSEYLF
Sbjct: 242 PDALFVVYSEYLF 254

[Close]

BLAST of Csor.00g168390 vs. NCBI nr
Match: XP_022945193.1 (RING-H2 finger protein ATL47-like [Cucurbita moschata])

HSP 1 Score: 521 bits (1343), Expect = 7.13e-187
Identity = 250/253 (98.81%), Postives = 251/253 (99.21%), Query Frame = 0


Query: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKF HHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFPHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120
           DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDCKEECHWIEM S+KRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDCKEECHWIEMHSEKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240

Query: 241 PDALFVVYSEYLF 253
           PDALFVVYSEYLF
Sbjct: 241 PDALFVVYSEYLF 253

[Close]

BLAST of Csor.00g168390 vs. NCBI nr
Match: XP_022967134.1 (RING-H2 finger protein ATL47 [Cucurbita maxima])

HSP 1 Score: 517 bits (1331), Expect = 4.82e-185
Identity = 248/253 (98.02%), Postives = 248/253 (98.02%), Query Frame = 0


Query: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAK GAYLQMKLVYNHLAPIVLFLL WM
Sbjct: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM 60

Query: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120
           DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIH S D
Sbjct: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD 120

Query: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDCKEECHWIEMPSKKRGDKDVRLTNVD KREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240

Query: 241 PDALFVVYSEYLF 253
           PDALFVVYSEYLF
Sbjct: 241 PDALFVVYSEYLF 253

[Close]

BLAST of Csor.00g168390 vs. NCBI nr
Match: XP_038893224.1 (E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida] >XP_038893225.1 E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida])

HSP 1 Score: 488 bits (1257), Expect = 9.24e-174
Identity = 233/252 (92.46%), Postives = 241/252 (95.63%), Query Frame = 0


Query: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSH DSL+VLEADIQYANSLAAAIPMAK G YLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120
           DCSC+CL PRYL+LFHILVYKVYPEGKQKR+ISRHGRKATIR+FYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKRNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDCKE  HWIEM SKKRGDKD RL N+D KREDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLMNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAET+SKED LRFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETLSKEDMLRFHRYINSLPKDY 240

Query: 241 PDALFVVYSEYL 252
           PDALFVVYSEYL
Sbjct: 241 PDALFVVYSEYL 252

[Close]

BLAST of Csor.00g168390 vs. ExPASy TrEMBL
Match: A0A6J1G051 (RING-H2 finger protein ATL47-like OS=Cucurbita moschata OX=3662 GN=LOC111449509 PE=4 SV=1)

HSP 1 Score: 521 bits (1343), Expect = 3.45e-187
Identity = 250/253 (98.81%), Postives = 251/253 (99.21%), Query Frame = 0


Query: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKF HHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFPHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120
           DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD
Sbjct: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDCKEECHWIEM S+KRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDCKEECHWIEMHSEKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240

Query: 241 PDALFVVYSEYLF 253
           PDALFVVYSEYLF
Sbjct: 241 PDALFVVYSEYLF 253

[Close]

BLAST of Csor.00g168390 vs. ExPASy TrEMBL
Match: A0A6J1HVW5 (RING-H2 finger protein ATL47 OS=Cucurbita maxima OX=3661 GN=LOC111466639 PE=4 SV=1)

HSP 1 Score: 517 bits (1331), Expect = 2.33e-185
Identity = 248/253 (98.02%), Postives = 248/253 (98.02%), Query Frame = 0


Query: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAK GAYLQMKLVYNHLAPIVLFLL WM
Sbjct: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKGGAYLQMKLVYNHLAPIVLFLLHWM 60

Query: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120
           DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIH S D
Sbjct: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHSSSD 120

Query: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDCKEECHWIEMPSKKRGDKDVRLTNVD KREDECGICLEPCTKMVLPNCCHAMCIKC
Sbjct: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDMKREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240

Query: 241 PDALFVVYSEYLF 253
           PDALFVVYSEYLF
Sbjct: 241 PDALFVVYSEYLF 253

[Close]

BLAST of Csor.00g168390 vs. ExPASy TrEMBL
Match: A0A5D3CUV6 (E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001890 PE=4 SV=1)

HSP 1 Score: 484 bits (1247), Expect = 1.50e-172
Identity = 230/252 (91.27%), Postives = 240/252 (95.24%), Query Frame = 0


Query: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSH DSL+VLEADIQYANSLAAAIPMAK G YLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120
           DCSC+CL PRYL+LFHILVYKVYPEGKQK++ISRHGRKATIR+FYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDCKE  HWIEM SKKRGDKD RL N+D KREDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLKNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVD ETVSKED L+FHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 241 PDALFVVYSEYL 252
           PDALF+VYSEYL
Sbjct: 241 PDALFIVYSEYL 252

[Close]

BLAST of Csor.00g168390 vs. ExPASy TrEMBL
Match: A0A1S3BE96 (E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo OX=3656 GN=LOC103488929 PE=4 SV=1)

HSP 1 Score: 484 bits (1247), Expect = 1.50e-172
Identity = 230/252 (91.27%), Postives = 240/252 (95.24%), Query Frame = 0


Query: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSH DSL+VLEADIQYANSLAAAIPMAK G YLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120
           DCSC+CL PRYL+LFHILVYKVYPEGKQK++ISRHGRKATIR+FYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVYPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDCKE  HWIEM SKKRGDKD RL N+D KREDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 KLDDCKEGHHWIEMSSKKRGDKDGRLKNIDMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVD ETVSKED L+FHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 241 PDALFVVYSEYL 252
           PDALF+VYSEYL
Sbjct: 241 PDALFIVYSEYL 252

[Close]

BLAST of Csor.00g168390 vs. ExPASy TrEMBL
Match: A0A0A0KPZ5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G591750 PE=4 SV=1)

HSP 1 Score: 480 bits (1236), Expect = 7.11e-171
Identity = 228/252 (90.48%), Postives = 240/252 (95.24%), Query Frame = 0


Query: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQLEKFSH DSL+VLEADIQYANSLAAAIPMAK G YLQMKLVYNHLAPIVLFLLQWM
Sbjct: 1   MYYQLEKFSHQDSLEVLEADIQYANSLAAAIPMAKGGVYLQMKLVYNHLAPIVLFLLQWM 60

Query: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120
           DCSC+CL PRYL+LFHILVYKV+PEGKQK++ISRHGRKATIR+FYAIILPSLQRIHGSLD
Sbjct: 61  DCSCTCLLPRYLNLFHILVYKVHPEGKQKQNISRHGRKATIRDFYAIILPSLQRIHGSLD 120

Query: 121 KLDDCKEECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKC 180
           KLDDCKEE HWIEM SKKR DKD RL N++ KREDECGICLEPCTKMVLPNCCH+MCIKC
Sbjct: 121 KLDDCKEEHHWIEMSSKKRVDKDGRLKNIEMKREDECGICLEPCTKMVLPNCCHSMCIKC 180

Query: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDY 240
           YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVD ETVSKED L+FHRYINSLPKDY
Sbjct: 181 YRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDTETVSKEDMLQFHRYINSLPKDY 240

Query: 241 PDALFVVYSEYL 252
           PDALF+VYSEYL
Sbjct: 241 PDALFIVYSEYL 252

[Close]

BLAST of Csor.00g168390 vs. TAIR 10
Match: AT1G24440.1 (RING/U-box superfamily protein )

HSP 1 Score: 340.9 bits (873), Expect = 8.8e-94
Identity = 170/257 (66.15%), Postives = 202/257 (78.60%), Query Frame = 0


Query: 1   MYYQLEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWM 60
           MYYQL K S+ DSL++LEADI++AN LAA IPM K G  LQMKLV ++LAP  +FLLQWM
Sbjct: 1   MYYQLTKSSYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWM 60

Query: 61  DCSCSCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLD 120
           D   SCL PRY   FHIL+YKV  +G+  R  SR+GRKATIREFY +ILPSL+R+H +  
Sbjct: 61  D--FSCLLPRYFDFFHILIYKVRADGRWNR--SRYGRKATIREFYGVILPSLERLHINFA 120

Query: 121 KLDDCKEECHWIEMP---SKKRGDKDVR--LTNVDTKREDECGICLEPCTKMVLPNCCHA 180
            L D   E  W   P   +KK+ D +    + ++D +REDECGICLEPCTKMVLPNCCHA
Sbjct: 121 DLPD---ESLWYPNPKAITKKQYDIEGSRYMNSIDLEREDECGICLEPCTKMVLPNCCHA 180

Query: 181 MCIKCYRNWNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINS 240
           MCIKCYRNWNT+SESCPFCRGS+KRVNSEDLWVLTC +DVVD ETV+KED LRF+ +INS
Sbjct: 181 MCIKCYRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINS 240

Query: 241 LPKDYPDALFVVYSEYL 253
           LPKDYP+A F+VY+EYL
Sbjct: 241 LPKDYPEAAFLVYNEYL 250

[Close]

BLAST of Csor.00g168390 vs. TAIR 10
Match: AT1G13195.1 (RING/U-box superfamily protein )

HSP 1 Score: 315.8 bits (808), Expect = 3.0e-86
Identity = 151/244 (61.89%), Postives = 189/244 (77.46%), Query Frame = 0


Query: 9   SHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWMDCSCSCLF 68
           S+++SL+VLEAD+Q+ANSLA AIPM K    LQMKLV+++ A ++LFLL+W+D S SCL 
Sbjct: 15  SYYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLI 74

Query: 69  PRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLDKLDDCKEE 128
           PRYL+LFH+LVYKV  +G+ K  ++ HGRKATI EFY +ILPSLQ +H +LD+L+     
Sbjct: 75  PRYLNLFHVLVYKVQSDGQPK--LTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIG 134

Query: 129 CHWIEMPSK-KRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTR 188
                +  K  +  +  R +N   +RE+ECGICLE CTKMVLPNCCH+MCIKCYRNWN +
Sbjct: 135 FDLKRLSKKITKEARSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLK 194

Query: 189 SESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDYPDALFVV 248
           S+SCPFCRGS+KRVNSEDLWVL   +DVVD  T S+ED  RF+ YINSLPKDYP+ALFVV
Sbjct: 195 SQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVV 254

Query: 249 YSEY 252
           Y EY
Sbjct: 255 YYEY 256

[Close]

BLAST of Csor.00g168390 vs. TAIR 10
Match: AT1G13195.2 (RING/U-box superfamily protein )

HSP 1 Score: 282.7 bits (722), Expect = 2.9e-76
Identity = 134/220 (60.91%), Postives = 166/220 (75.45%), Query Frame = 0


Query: 33  MAKEGAYLQMKLVYNHLAPIVLFLLQWMDCSCSCLFPRYLSLFHILVYKVYPEGKQKRSI 92
           M K    LQMKLV+++ A ++LFLL+W+D S SCL PRYL+LFH+LVYKV  +G+ K  +
Sbjct: 1   MGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPK--L 60

Query: 93  SRHGRKATIREFYAIILPSLQRIHGSLDKLDDCKEECHWIEMPSK-KRGDKDVRLTNVDT 152
           + HGRKATI EFY +ILPSLQ +H +LD+L+          +  K  +  +  R +N   
Sbjct: 61  TTHGRKATISEFYGVILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEARSSRFSNAGL 120

Query: 153 KREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTRSESCPFCRGSLKRVNSEDLWVLTC 212
           +RE+ECGICLE CTKMVLPNCCH+MCIKCYRNWN +S+SCPFCRGS+KRVNSEDLWVL  
Sbjct: 121 EREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAG 180

Query: 213 SDDVVDAETVSKEDTLRFHRYINSLPKDYPDALFVVYSEY 252
            +DVVD  T S+ED  RF+ YINSLPKDYP+ALFVVY EY
Sbjct: 181 DNDVVDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEY 218

[Close]

BLAST of Csor.00g168390 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein )

HSP 1 Score: 224.2 bits (570), Expect = 1.2e-58
Identity = 114/241 (47.30%), Postives = 155/241 (64.32%), Query Frame = 0


Query: 9   SHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWMDCSCSCLF 68
           S  DSL+ LEADIQ+AN+LA+  P   +G Y+QM+L Y+  A + LFLLQW DC     F
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH----F 63

Query: 69  PRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLDKLDDCKEE 128
              L L  IL+YK Y +G  K ++S H RK +IREFY ++ PSL ++HG +  +++ K++
Sbjct: 64  AGALGLLRILIYKAYVDG--KTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 123

Query: 129 CHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKCYRNWNTRS 188
               +   KK      +++ +D +RE+ECGICLE   K+VLP C H+MCI CYRNW  RS
Sbjct: 124 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARS 183

Query: 189 ESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDYPDALFVVY 248
           +SCPFCRGSLKRVNS DLW+ TCS ++ D   + KE+  R   YI+ LP    D   V Y
Sbjct: 184 QSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 238

Query: 249 S 250
           +
Sbjct: 244 A 238

[Close]

BLAST of Csor.00g168390 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein )

HSP 1 Score: 214.5 bits (545), Expect = 9.6e-56
Identity = 112/242 (46.28%), Postives = 155/242 (64.05%), Query Frame = 0


Query: 5   LEKFSHHDSLQVLEADIQYANSLAAAIPMAKEGAYLQMKLVYNHLAPIVLFLLQWMDCSC 64
           + K S  DSL+ LEADIQ+AN++A   P  K+GA +QM+L Y   A  +LFL+QW DC  
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCHL 60

Query: 65  SCLFPRYLSLFHILVYKVYPEGKQKRSISRHGRKATIREFYAIILPSLQRIHGSLDKLDD 124
           +      L L  +L+Y  Y +GK   S+  + RK +I++FYA+I PSL ++   +  LDD
Sbjct: 61  A----GTLGLLRVLIYMTYADGKTTMSV--YERKTSIKDFYAVIFPSLLQLERGITDLDD 120

Query: 125 CKE-ECHWIEMPSKKRGDKDVRLTNVDTKREDECGICLEPCTKMVLPNCCHAMCIKCYRN 184
            K+ E   I   +K   +K V+L+ +D +RE+ECGIC+E    +VLPNC H++CIKCYR+
Sbjct: 121 RKQKEVCKIRYRNKDETEK-VKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRD 180

Query: 185 WNTRSESCPFCRGSLKRVNSEDLWVLTCSDDVVDAETVSKEDTLRFHRYINSLPKDYPDA 244
           W+ RSESCPFCR SLKRVNS DLW+L    D V+  T+ +E+  R   YI  LP   PD 
Sbjct: 181 WHGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQ 235

Query: 245 LF 246
           +F
Sbjct: 241 VF 235

The following BLAST results are available for this feature:

BLAST of Csor.00g168390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	1.7e-57	47.30	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]
Q4VBT5	3.7e-04	29.41	Probable E3 ubiquitin-protein ligase makorin-1 OS=Danio rerio OX=7955 GN=mkrn1 P...	[more]

BLAST of Csor.00g168390 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573671.1	1.28e-189	100.00	E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023542538.1	1.33e-189	100.00	RING-H2 finger protein ATL47-like [Cucurbita pepo subsp. pepo]	[more]
XP_022945193.1	7.13e-187	98.81	RING-H2 finger protein ATL47-like [Cucurbita moschata]	[more]
XP_022967134.1	4.82e-185	98.02	RING-H2 finger protein ATL47 [Cucurbita maxima]	[more]
XP_038893224.1	9.24e-174	92.46	E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida] >XP_038893225.1 E3 ub...	[more]

BLAST of Csor.00g168390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G051	3.45e-187	98.81	RING-H2 finger protein ATL47-like OS=Cucurbita moschata OX=3662 GN=LOC111449509 ...	[more]
A0A6J1HVW5	2.33e-185	98.02	RING-H2 finger protein ATL47 OS=Cucurbita maxima OX=3661 GN=LOC111466639 PE=4 SV...	[more]
A0A5D3CUV6	1.50e-172	91.27	E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BE96	1.50e-172	91.27	E3 ubiquitin-protein ligase RNF8-B OS=Cucumis melo OX=3656 GN=LOC103488929 PE=4 ...	[more]
A0A0A0KPZ5	7.11e-171	90.48	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G591750 P...	[more]

BLAST of Csor.00g168390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24440.1	8.8e-94	66.15	RING/U-box superfamily protein	[more]
AT1G13195.1	3.0e-86	61.89	RING/U-box superfamily protein	[more]
AT1G13195.2	2.9e-76	60.91	RING/U-box superfamily protein	[more]
AT5G01520.1	1.2e-58	47.30	RING/U-box superfamily protein	[more]
AT3G47160.1	9.6e-56	46.28	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 157..194 e-value: 8.3E-4 score: 28.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 155..195 e-value: 3.2E-7 score: 30.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 157..195 score: 11.722122
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 133..205 e-value: 6.2E-12 score: 46.7
None	No IPR available	PANTHER	PTHR15315:SF35	F21J9.10	coord: 5..252
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 5..252
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 147..200
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 172..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g168390.m01	Csor.00g168390.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity