Csor.00g167800 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCAGTTTCTCTCTCTTCTTTCTCCCATACGCCTTCTGTTGTTCCTTCGCCTTGTCTACTACAGCTTTACCGGCGAATCTTACTTCCTCGCAGAACGCTTGCCTGTTTCTCCTCCACTTTGACTTCTTCTGCTTCGATCACGTCTTCGTCAATTTCGGCGCCAAAAGTAGTGGTTACCAGAGAGCGCGGCAAGAACGGGAAGCTCATCGATGCTCTGGTAAATTTTCATTCCTCTCGATTTTGTAATCAGAGGATGTTTTGTTCAGATTGTTGATTTATCTTTTGATTCCTGGAGCCTTTTTTTTGCTTTGTTCTCGTTCGCCAGTTTGATTCTCATTCTACTTAGGCAGTGTGTTAATCTCTTATATACATGTGATGCATCGATTTGTAAGTCGACGCGTTTGACTAAATGTTGGAATAAATGCTGGTTGTTCGAGTCTTTTGGTTAATTGTTGCCTTCTCATGTTCTTCACCGATTTTCTAGATCTTTCCGAAATTGTTAATCATTTTGAGACTCATTACTACCGTTACATCTGCTGGAATATTGTTGTTATTGTCTTTTTGGAGAAGATGAGGAATGTGCACTTTAGTGAACGTTTCTTGCCGCTGAAGTAAATTAGAACTGTAATAGTTTGTAAGTTCCAATGTAGTTTCTGTTTTCCAAAAATTAAAATGTATTTTACCATCAGTTGTAAGATAAGAACGCCTCTAACATCAAATGTGCTGATCTATACTCGAAAGTAGCCTCAATATGAGATTAAGGTCAGTGCTTAGGTATATTATCAGAACTATATTGAACCATTCCATCGCTGCATGCGGTGGTAAATTTCTTGTTAATCTCAGTTCTTTTTTTTTTTTTTTTTTTCATACAATAGCTTATTCGTAATAGCTGCTCTGCATTGTTGATTTTAGGGCGTTGATATTGAGAATATTGTTCTTTTTTATTGGATGCGTATAGTACTTTCGTGGTGATTAGTGCTTCAATAGGTACTATGAATCCTGTTCATTGCGTAGTCTCTCGTAGTATTTCATCCAGGAAACCGATCTATTGCTTCAATCAAGAATAGGTAGGGTAGGATGGAGAAAAGACATGATGTTTTATTTTGAACTTTTGTCCATTATCATCCACTAATGGATGAATATTTCTGACATGGACATATTTGTTACATAACTTAAAGTTACTGATGTTTTACTCTACATACCATTGCTTCTCTCCTTAATTTCCTTTTTTTTCCCCTAAAAAAACATTCCTCGACTATTCTTTAACAAACCTCCTGTGAAGGTAAAATAATAGATATTTTTGCGTGGATGAGCAAGCTACAATCCAATCTATGAAGTTTGAAAGCAATATAAACCAGACTATTGATATTTCTGATGTTGATCGCAGGCAAGACATGGAATAAACTGTTTGGAGCTTCCCCTCATTCAACACAGTCAAGGACCTGACTTGAATAGGTTACACTCTGTACTTAGTGGTACGTCCTTCAGGATTGGTTTTCTCTTCTCGCTCTCCTCAAAATCTCACTATCCTCGTTCAACTGATTCTTTCTATCTCAAATGCACGCCTATATTTATTAGTAATTTTCAATGTACCACAGAATATTTGGAAGACTATTAATTGGCACAACCGCTTACAATCTTCTTTCCCTCTTCATTAACAGATTCTGTATTTGATTGGATCATTATAACCTCCCCTGAAGCTGGCTTGGTGTTCCTACAGGCATGGAAGTAAGGGTTAGAACTAACTCACTGGACTCTCACCATTCTTGTATGTCACACACACACACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAAAATTGACAGTTGCTAGTTTCATAGAACTTTGAAAGGTTTGAAGTTTCATGAGTTTATTAACAATATGTTTTGAATATTTTTCCTATTTAATTTATCAGCATTTGCATACAACTTGTTTTCTTTGTAGAGAATGTTAGGACTTTAAGAAATTCATACTCATCATACTAGTTGGTCAACCTGGTCTAGTGCTTTAGAATTTGTTGAGTAATGGATGGTTTGTTTCGAGTTACACGTGATACAATACAACCGAAGGAAACATCATATTACCATTTGATAATGTAAATTATTATATTAATGCCATTGGATAAATTATATTTTACAACATTAAATGCGTTGTTAGGACCTTTTTTCTTTAACCTGTATGTGGCTGTACGGTACATGAGCTATATCATTCTCTTTGAAATGTATTGTTGGTCAAGTGAGGCAAAACGTGTTTTTGAATTTTGTTTTATTGCTGGTCATCTCTTTCTTGCTGCTGAATAGTAATTTGCATAGTTGGTTATATATAATCATGATCCACAGTGCACTTTTTTTTACAAATGACGAGCACAAACTCAAGATTGATTGATACTTTCCCATCATGTGTTCCATTAAAGCTGCTTTAGGTCGTCCTTGAGTGATACCTTCACATTATTTTGTTCCTTAGGGACGCCGGAATGCCAAAAGTTAGAATAGGTGTTGTTGGAGCTGGTACAGCTAACATTTTTGACGAAATGTTGCAATCATCAAACTTACTTGAAGTGGCGTTTGCACCCTCAAAAGGTAAGATGTATGTCAAAATCAAGTCTCGTGCATGATGCACATATATTCATTATTTGTTGATTGCATTTGTTTGCATGATGTTAATATTTTTAGCTATATCATTTACCTACTGTCTTAAGTCAAATAAGATGATGAAAAGATCTCAAGAAAGACAGTGAAGTAGTATGGCACATCAGAACTATCAAAACAACTCCAAAGAAATATGTCAAATGAATTAGATATTATTCGTGCCGGAAATTTTTATTCTTAAATCCTCACTCTGTTATGAACGTTGTTGAACAATCACAATTTGTCAGGGGTATTTGTATCTTCGCAGCAGGCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTGAGAGAACATAGACGATTTATTATTCAATGTGTGTATACATTTGGATTTGATTAGAGTAAGAATCCTTATACAAAGATGCGTGGCTTTCCTACATATCTGTTGTTTATTATTATTCTTATTCTTATTATTGTTAGTATGATGATGATGATGATGATGATGATGATGATGATGGTGATGATGATGATTATTTGTTAGGATGTTGTCCTGCACATACATTATTTGAAATATTTGTCCAATTATCTATTTCAGCAATAGGCAAGGTCTTGGCTTCCGAGCTTCCGAAGTTAGGGAATACAAAATGCAGTGTCTTATATCCTGCTTCTACCAAAGCAAGCAATGATATTGGTATGCAACGTACTTTTTTTCTTTTACACTCTTGAGAGCTATTTTCATTAGATAGAGTGGAAACAATGATCTTTCTTTTCTCTCTCTTTTTTTTTTTTTTTTTTTTTTCTCATGCAATAACTATAAGAAATTTTATTTGAACTGGAATTATTGTTACTAAATTGTTGCTTGATGGCTTGCAGCTATCAATTGTTTAAGGTTTACTTGATTAGCCACTCTTTGTGATAAGTCCAGTTTTACTTGGACCAGTAAAACCTAATTTCCACAGCTGAAAATTCAAAATACTTTGAATTAGATTAATAACATTTTAATGGCACTCCCTCAAATCAAGTACTGACATCTCTTTACTTTTGATTCATGTAAAATAAAAACACAAAATACGAACAATGTGAATAATTGCCAGGTTTTTTATGTTCTAATCACTTAAAAAATTGGGAACTTTTGTTCCTAAGAAATGTAAGGAAGTGGAAGTTATTTATTGAAGTACTTTAAATTTCAGAGATAGTGGTGCCTGAAACTAGATGCTGACTCTTGTTTCTTAAGTCAATACTTTTTCCTTTCTAGCAATATTTCATATTTCGTAGACTGTCATCACTCTTTGTGGTAGATAGTATATATTGTTTACATATATATTTTCCTCGTTTTATGCAAACTGTAGCAGATATCTGATATTCATGTCAAGTGATTTGTTTGCAAGTATATAGTAGCGGGCTTTTATCTGCTACTCGCTCTTTTTTTTTTCAAAAATAAAGTTTTAGTATTTGGTGGTCTCACTGTTGCACCGTAGTGTTGTTCCGTCTATTATAACTAAAAGCAAAATAATGGCTTTTAGAAATAACCTTGGTATCCGTCTTTGCTATCTGTACAGAGGAAGGCCTTTCAAATCGTGGATTTGAGGTCATGAGGCTCAACACCTATACTACGGTAAAGTATTCATGTGCCTTAGTATAACACCGAAAATTTAAAGATGAACCACCCTGATTTAACATTGCATGCGTTTTTTAGAGGTGTATACATCTGCTTGATCTTGAGTGAAGTTAATAAATATCATTTACTACGCCAATCTAGAGGGAATCAGTAAAGCGAGTTACAGCATAACTAATGATAGATGCTTAAAAGAACTATATATGGGACTTTCTTTAAGTGTATAGAGGGAATCCTTGGGACAATTAGCTGTCATTGGGGAAAGAGATTTGTGGAAGATACTCGGCGAACCCGTACCTAACGTATAGGAGCAATTTACAAGGAAATTGTGAACTGCACAACTAATTAAAAAATTCAAATTAAATTGAATTACATCGAGTGCGTAATATATATTGCCTTCCAGGAGTAGTCTTGAATCAGAATACCTTGTTCCCTGCACCATTCTCTTAGTAACCTTGACAGGCTATGTGAAACATTACGGTCCACTCAAACATTATTGATTGGTACCTTTCAGTCACCTGTTGATTACGTTGATCAATTCATTCTCGAGCAAGCACGTTCATTGCCTGTTGTCACAGTGGCTTCACCTTCTGCAATTCGGTATGAACTGTTTTTTTCCTTTTTCTTTTTTGCATGTCTCACTTTTGACTATTTGATTTCTTTAGTTTTCTCATCCGGGGGAGAGAGAATTGTAATGTTAATTTTTTTGCACTATCTTGGCATTGATCATTTATCTGTCGCAACAGCGCATGGGTCAACCTTATTTCCGAGCCGAAGGAGTGGGAAAAATCACTTGCCTGTATTGGGGAAACAACTGCAGCAGCCGCAAAAAGATTAGGATTGAAAAACATATACTACCCCAAGAATCCTGGATTGGAAGGGTAACTTGTTCCGTACTTCCAACTTAACAATCATCTGTTGATGCATTTCTTTTCTTAGTTCAGATTCCATGCTTAACAATCTTTTCAATAGATCGAATATATTGACTGCTGAATCTACAAATTATGGTAACTGGGATGCAGGTGGGTTGACAGTATATTGGAAGCGCTAAGATCAGAAGCTCAAGTTGTTTGA ATGGCTCCAGTTTCTCTCTCTTCTTTCTCCCATACGCCTTCTGTTGTTCCTTCGCCTTGTCTACTACAGCTTTACCGGCGAATCTTACTTCCTCGCAGAACGCTTGCCTGTTTCTCCTCCACTTTGACTTCTTCTGCTTCGATCACGTCTTCGTCAATTTCGGCGCCAAAAGTAGTGGTTACCAGAGAGCGCGGCAAGAACGGGAAGCTCATCGATGCTCTGGCAAGACATGGAATAAACTGTTTGGAGCTTCCCCTCATTCAACACAGTCAAGGACCTGACTTGAATAGGTTACACTCTGTACTTAGTGATTCTGTATTTGATTGGATCATTATAACCTCCCCTGAAGCTGGCTTGGTGTTCCTACAGGCATGGAAGGACGCCGGAATGCCAAAAGTTAGAATAGGTGTTGTTGGAGCTGGTACAGCTAACATTTTTGACGAAATGTTGCAATCATCAAACTTACTTGAAGTGGCGTTTGCACCCTCAAAAGCAATAGGCAAGGTCTTGGCTTCCGAGCTTCCGAAGTTAGGGAATACAAAATGCAGTGTCTTATATCCTGCTTCTACCAAAGCAAGCAATGATATTGAGGAAGGCCTTTCAAATCGTGGATTTGAGGTCATGAGGCTCAACACCTATACTACGTCACCTGTTGATTACGTTGATCAATTCATTCTCGAGCAAGCACGTTCATTGCCTGTTGTCACAGTGGCTTCACCTTCTGCAATTCGCGCATGGGTCAACCTTATTTCCGAGCCGAAGGAGTGGGAAAAATCACTTGCCTGTATTGGGGAAACAACTGCAGCAGCCGCAAAAAGATTAGGATTGAAAAACATATACTACCCCAAGAATCCTGGATTGGAAGGGTGGGTTGACAGTATATTGGAAGCGCTAAGATCAGAAGCTCAAGTTGTTTGA ATGGCTCCAGTTTCTCTCTCTTCTTTCTCCCATACGCCTTCTGTTGTTCCTTCGCCTTGTCTACTACAGCTTTACCGGCGAATCTTACTTCCTCGCAGAACGCTTGCCTGTTTCTCCTCCACTTTGACTTCTTCTGCTTCGATCACGTCTTCGTCAATTTCGGCGCCAAAAGTAGTGGTTACCAGAGAGCGCGGCAAGAACGGGAAGCTCATCGATGCTCTGGCAAGACATGGAATAAACTGTTTGGAGCTTCCCCTCATTCAACACAGTCAAGGACCTGACTTGAATAGGTTACACTCTGTACTTAGTGATTCTGTATTTGATTGGATCATTATAACCTCCCCTGAAGCTGGCTTGGTGTTCCTACAGGCATGGAAGGACGCCGGAATGCCAAAAGTTAGAATAGGTGTTGTTGGAGCTGGTACAGCTAACATTTTTGACGAAATGTTGCAATCATCAAACTTACTTGAAGTGGCGTTTGCACCCTCAAAAGCAATAGGCAAGGTCTTGGCTTCCGAGCTTCCGAAGTTAGGGAATACAAAATGCAGTGTCTTATATCCTGCTTCTACCAAAGCAAGCAATGATATTGAGGAAGGCCTTTCAAATCGTGGATTTGAGGTCATGAGGCTCAACACCTATACTACGTCACCTGTTGATTACGTTGATCAATTCATTCTCGAGCAAGCACGTTCATTGCCTGTTGTCACAGTGGCTTCACCTTCTGCAATTCGCGCATGGGTCAACCTTATTTCCGAGCCGAAGGAGTGGGAAAAATCACTTGCCTGTATTGGGGAAACAACTGCAGCAGCCGCAAAAAGATTAGGATTGAAAAACATATACTACCCCAAGAATCCTGGATTGGAAGGGTGGGTTGACAGTATATTGGAAGCGCTAAGATCAGAAGCTCAAGTTGTTTGA MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLVFLQAWKDAGMPKVRIGVVGAGTANIFDEMLQSSNLLEVAFAPSKAIGKVLASELPKLGNTKCSVLYPASTKASNDIEEGLSNRGFEVMRLNTYTTSPVDYVDQFILEQARSLPVVTVASPSAIRAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKNPGLEGWVDSILEALRSEAQVV Homology
BLAST of Csor.00g167800 vs. ExPASy Swiss-Prot
Match: O48721 (Uroporphyrinogen-III synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=UROS PE=2 SV=2) HSP 1 Score: 350.1 bits (897), Expect = 2.5e-95 Identity = 175/265 (66.04%), Postives = 218/265 (82.26%), Query Frame = 0
BLAST of Csor.00g167800 vs. ExPASy Swiss-Prot
Match: Q10QR9 (Uroporphyrinogen-III synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=UROS PE=2 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 9.1e-90 Identity = 166/257 (64.59%), Postives = 195/257 (75.88%), Query Frame = 0
BLAST of Csor.00g167800 vs. NCBI nr
Match: KAG6598391.1 (Uroporphyrinogen-III synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 594 bits (1532), Expect = 6.18e-214 Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0
BLAST of Csor.00g167800 vs. NCBI nr
Match: XP_022962039.1 (uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita moschata] >XP_022962040.1 uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 593 bits (1528), Expect = 4.39e-213 Identity = 304/305 (99.67%), Postives = 305/305 (100.00%), Query Frame = 0
BLAST of Csor.00g167800 vs. NCBI nr
Match: XP_022996969.1 (uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 588 bits (1517), Expect = 2.09e-211 Identity = 302/305 (99.02%), Postives = 304/305 (99.67%), Query Frame = 0
BLAST of Csor.00g167800 vs. NCBI nr
Match: XP_023547155.1 (uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 577 bits (1487), Expect = 8.08e-207 Identity = 298/305 (97.70%), Postives = 300/305 (98.36%), Query Frame = 0
BLAST of Csor.00g167800 vs. NCBI nr
Match: XP_038885202.1 (uroporphyrinogen-III synthase, chloroplastic [Benincasa hispida]) HSP 1 Score: 533 bits (1372), Expect = 3.11e-189 Identity = 278/307 (90.55%), Postives = 289/307 (94.14%), Query Frame = 0
BLAST of Csor.00g167800 vs. ExPASy TrEMBL
Match: A0A6J1HDZ7 (Uroporphyrinogen-III synthase OS=Cucurbita moschata OX=3662 GN=LOC111462623 PE=3 SV=1) HSP 1 Score: 593 bits (1528), Expect = 2.13e-213 Identity = 304/305 (99.67%), Postives = 305/305 (100.00%), Query Frame = 0
BLAST of Csor.00g167800 vs. ExPASy TrEMBL
Match: A0A6J1KA58 (Uroporphyrinogen-III synthase OS=Cucurbita maxima OX=3661 GN=LOC111492039 PE=3 SV=1) HSP 1 Score: 588 bits (1517), Expect = 1.01e-211 Identity = 302/305 (99.02%), Postives = 304/305 (99.67%), Query Frame = 0
BLAST of Csor.00g167800 vs. ExPASy TrEMBL
Match: A0A0A0LLB2 (Uroporphyrinogen-III synthase OS=Cucumis sativus OX=3659 GN=Csa_2G360600 PE=3 SV=1) HSP 1 Score: 532 bits (1370), Expect = 1.82e-189 Identity = 278/307 (90.55%), Postives = 290/307 (94.46%), Query Frame = 0
BLAST of Csor.00g167800 vs. ExPASy TrEMBL
Match: A0A1S3BBN0 (Uroporphyrinogen-III synthase OS=Cucumis melo OX=3656 GN=LOC103487917 PE=3 SV=1) HSP 1 Score: 521 bits (1343), Expect = 2.45e-185 Identity = 272/308 (88.31%), Postives = 287/308 (93.18%), Query Frame = 0
BLAST of Csor.00g167800 vs. ExPASy TrEMBL
Match: A0A6J1CQT7 (Uroporphyrinogen-III synthase OS=Momordica charantia OX=3673 GN=LOC111013898 PE=3 SV=1) HSP 1 Score: 508 bits (1307), Expect = 6.00e-180 Identity = 267/310 (86.13%), Postives = 285/310 (91.94%), Query Frame = 0
BLAST of Csor.00g167800 vs. TAIR 10
Match: AT2G26540.1 (uroporphyrinogen-III synthase family protein ) HSP 1 Score: 350.1 bits (897), Expect = 1.8e-96 Identity = 175/265 (66.04%), Postives = 218/265 (82.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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