Csor.00g167690 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g167690
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr05: 850771 .. 852349 (+)
RNA-Seq ExpressionCsor.00g167690
SyntenyCsor.00g167690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCCAATCGGCCAGTTATGCGGTGTACGGCCCCAATTTGACTCTTTGTACTAGGAATTCATTGGGGGCAACCCAGCGAAGGGCCATGGCTTCGTGTTGCTCATCCGGGCGACAAGTGACAAAAAGGTCATAATCCCATAAAGAAATTTTGCAAAATAAAGTTACGGGTGGAGTGAAGCTGAAGGCAAGGTACCATAATTTTAGTGGCCAATTTGCACCTGCAGTGAGTGTATCAAGAAAGTTAAGAACCTCATCCATCCTCCCGCTCATCCTTGTTTGGTTTTGAGTGTTAAAGATTGTTTATGGTATCAAAATTTGGTGTCTATTTTAATCTATCTTTCATGCTGTCTTTTGTTCATGGGATTCGGCTAAACCATTTTAGATCATTGACACTTCTAAGGGTGAGTGAATTTAAGCTTGATTCATGTGGAAGAAATTTATTTGAAGGCAAGTTTTAGAATCTGTGCGCTGTTTTTGATAGGTTATGCATGTCAAGTGTTTGATAAAAGTCCTCTGACCGAGCTTTGTGTTGTTTTTGCATTATATCAATTGATTAACCATTTGGTGAGAAAAATATGGTCACCAGAAGCTCAAGTTCTGAGAATTTATAATATTATCTTTTGAGCCCCAACAGCCATCACCTTTTTTTTTGTGGGGGCTTCCTAGATGTGTATGGCAGGATAGGGATCGGCCAGTTGTCTTTTTCATTGATCCTAGAAAAATGGCGTTCTATTCATCTCTGCCAATGAAATTCAATGTTCATTATGGATTTTCTTATAAAAGCGTGCACAGGCGCCTCGGTCACACATGCACGTATTCACGCGGCTGTACCAATAAAAGCATTGCGGTTGTTCCCTGTTTTCTTTGTTTGTAGGCTTAGGGGCATTGCTGAAAAGACTGAAAGCACTTCTTTTAGCGTGGGGGGGCTTGATCAGGTGGGTTTCATAGATGGCAATGCAATAATACTCAAAAGGTAGCTTTCCTATCAGTTGCCCATACCTTTACGATATATATCGTTCATTCTGATGCTTTTCAATTTAAAAAATCATATCAACTGTTACTGAAGGCATTGATACCTATTCTGAATTATTGTTATTAATATTATACGTAGTGGTGGCAATTGGATTGTCTAAGGCATTATCTCACTTAACCCCACACCTTTTGAGCCCCATTAACCCTCTCTTTTCAGAGGTTTCACTTGTTTCGATGCATCTAGAAATGGTTGATCACTATTTTAACTGTCTATTTGTTGTTGGGACCCTGCCCCCTGCCCCCTGCCCCCTGGCCCCCTGGCATCTGATGCAATGTTTTTAGGCATTGCTCCCACACGTTTACTTTCTCAATGTCATTTTGATCTACTTGGGCAGTTTTATAGCCAATAAAGCTAACAACCTCTGTGGGAGAACTTTTTACTGTCTCTTTTATGGTTAATATTCTTAAAAGCAAGGGATGGGTGTGGTAGAGAAAAAAATATTTCTCAAGTAGATTAAGACAATTATTGAATCCGCTTACCTCTTTTAAACTTATATGAGAGTTTTGGTCCCAGCGTTATATGTGGTTTTTGTCTGGCTTGTTAA

mRNA sequence

ATGCTCCAATCGGCCAGTTATGCGGTGTACGGCCCCAATTTGACTCTTTGTACTAGGAATTCATTGGGGGCAACCCAGCGAAGGGCCATGGCTTCGTGTTGCTCATCCGGGCGACAAGTGACAAAAAGTGAGTGTATCAAGAAAGTTAAGAACCTCATCCATCCTCCCGCTCATCCTTGTTTGGTTTTGAGTGTTAAAGATTGTTTATGGCTTAGGGGCATTGCTGAAAAGACTGAAAGCACTTCTTTTAGCGTGGGGGGGCTTGATCAGGTGGGTTTCATAGATGGCAATGCAATAATACTCAAAAGCGTTATATGTGGTTTTTGTCTGGCTTGTTAA

Coding sequence (CDS)

ATGCTCCAATCGGCCAGTTATGCGGTGTACGGCCCCAATTTGACTCTTTGTACTAGGAATTCATTGGGGGCAACCCAGCGAAGGGCCATGGCTTCGTGTTGCTCATCCGGGCGACAAGTGACAAAAAGTGAGTGTATCAAGAAAGTTAAGAACCTCATCCATCCTCCCGCTCATCCTTGTTTGGTTTTGAGTGTTAAAGATTGTTTATGGCTTAGGGGCATTGCTGAAAAGACTGAAAGCACTTCTTTTAGCGTGGGGGGGCTTGATCAGGTGGGTTTCATAGATGGCAATGCAATAATACTCAAAAGCGTTATATGTGGTTTTTGTCTGGCTTGTTAA

Protein sequence

MLQSASYAVYGPNLTLCTRNSLGATQRRAMASCCSSGRQVTKSECIKKVKNLIHPPAHPCLVLSVKDCLWLRGIAEKTESTSFSVGGLDQVGFIDGNAIILKSVICGFCLAC
Homology
[Close]
BLAST of Csor.00g167690 vs. NCBI nr
Match: KAG6598380.1 (hypothetical protein SDJN03_08158, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 232 bits (591), Expect = 7.53e-77
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MLQSASYAVYGPNLTLCTRNSLGATQRRAMASCCSSGRQVTKSECIKKVKNLIHPPAHPC 60
           MLQSASYAVYGPNLTLCTRNSLGATQRRAMASCCSSGRQVTKSECIKKVKNLIHPPAHPC
Sbjct: 1   MLQSASYAVYGPNLTLCTRNSLGATQRRAMASCCSSGRQVTKSECIKKVKNLIHPPAHPC 60

Query: 61  LVLSVKDCLWLRGIAEKTESTSFSVGGLDQVGFIDGNAIILKSVICGFCLAC 112
           LVLSVKDCLWLRGIAEKTESTSFSVGGLDQVGFIDGNAIILKSVICGFCLAC
Sbjct: 61  LVLSVKDCLWLRGIAEKTESTSFSVGGLDQVGFIDGNAIILKSVICGFCLAC 112

The following BLAST results are available for this feature:
BLAST of Csor.00g167690 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g167690 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6598380.17.53e-77100.00hypothetical protein SDJN03_08158, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g167690 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g167690 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g167690.m01Csor.00g167690.m01mRNA