Csor.00g167460 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g167460
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	ethylene-responsive transcription factor RAP2-1-like
Location	Csor_Chr05: 721121 .. 721555 (+)
RNA-Seq Expression	Csor.00g167460
Synteny	Csor.00g167460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACAAACACGCGACTCGACCATTCCGGAGAAGCGCAAGCAGCTGACAGGGCGGCAGGAGAAGCCGTACAGGGGGATTAGGATGAGGAAGTGGGGGAAGTGGGTCGCCGAAATCAGGGAGCCCAACAAGCGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCCCTCGCTGCCGCTAGAGCCTACGACACCGCCGTCTTCTACCTCAGAGGCCCATCCGCCCGCCTTAACTTTCCCGACCTCATCTTACAGGACATGGACCACCAGCTTCTGGACGTTTCACCTTCTTCAATTCGCAAAAGAGCTATTGAGGTGGGTGCCAGAGTGGACGCCGCCGCCAACCGAACTTCTCTCCGACAATCGAAACCCATTTCCGAGAAGCCCGATTTGAACCAGTTTCCGGAGCCGGAAAGCTCGGATGAAGATTGTTGA

mRNA sequence

ATGGAACAAACACGCGACTCGACCATTCCGGAGAAGCGCAAGCAGCTGACAGGGCGGCAGGAGAAGCCGTACAGGGGGATTAGGATGAGGAAGTGGGGGAAGTGGGTCGCCGAAATCAGGGAGCCCAACAAGCGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCCCTCGCTGCCGCTAGAGCCTACGACACCGCCGTCTTCTACCTCAGAGGCCCATCCGCCCGCCTTAACTTTCCCGACCTCATCTTACAGGACATGGACCACCAGCTTCTGGACGTTTCACCTTCTTCAATTCGCAAAAGAGCTATTGAGGTGGGTGCCAGAGTGGACGCCGCCGCCAACCGAACTTCTCTCCGACAATCGAAACCCATTTCCGAGAAGCCCGATTTGAACCAGTTTCCGGAGCCGGAAAGCTCGGATGAAGATTGTTGA

Coding sequence (CDS)

ATGGAACAAACACGCGACTCGACCATTCCGGAGAAGCGCAAGCAGCTGACAGGGCGGCAGGAGAAGCCGTACAGGGGGATTAGGATGAGGAAGTGGGGGAAGTGGGTCGCCGAAATCAGGGAGCCCAACAAGCGGTCTAGGATTTGGCTTGGTTCTTACACAACCCCCCTCGCTGCCGCTAGAGCCTACGACACCGCCGTCTTCTACCTCAGAGGCCCATCCGCCCGCCTTAACTTTCCCGACCTCATCTTACAGGACATGGACCACCAGCTTCTGGACGTTTCACCTTCTTCAATTCGCAAAAGAGCTATTGAGGTGGGTGCCAGAGTGGACGCCGCCGCCAACCGAACTTCTCTCCGACAATCGAAACCCATTTCCGAGAAGCCCGATTTGAACCAGTTTCCGGAGCCGGAAAGCTCGGATGAAGATTGTTGA

Protein sequence

MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLRQSKPISEKPDLNQFPEPESSDEDC

Homology

[Close]

BLAST of Csor.00g167460 vs. ExPASy Swiss-Prot
Match: Q8LC30 (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.7e-38
Identity = 89/149 (59.73%), Postives = 105/149 (70.47%), Query Frame = 0


Query: 1   MEQTRDSTIPEKRKQLTGRQ-------EKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSY 60
           ME+ ++ +   KR+Q    +        KPYRGIR RKWGKWVAEIREPNKRSR+WLGSY
Sbjct: 1   MEREQEESTMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSY 60

Query: 61  TTPLAAARAYDTAVFYLRGPSARLNFPDLILQDMDH----QLLDVSPSSIRKRAIEVGAR 120
           TT +AAARAYD AVFYLRGPSARLNFPDL+LQ+ DH       D+  + IR++A EVGAR
Sbjct: 61  TTDIAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGAR 120

Query: 121 VDA--AANRTSLRQSKPISEKPDLNQFPE 137
           VDA  A+   S+  S P   KPDLNQ PE
Sbjct: 121 VDALLASAAPSMAHSTPPVIKPDLNQIPE 149

[Close]

BLAST of Csor.00g167460 vs. ExPASy Swiss-Prot
Match: Q8W3M3 (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 4.4e-34
Identity = 79/127 (62.20%), Postives = 93/127 (73.23%), Query Frame = 0


Query: 13  RKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRG 72
           ++ L    EK Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T +AAARAYDTAVFYLRG
Sbjct: 25  KRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRG 84

Query: 73  PSARLNFPDLILQD---MDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLRQSKPISEKP 132
           PSARLNFP+ + +D    +    D+SP+ IRK+A EVGARVDA      LR    + E  
Sbjct: 85  PSARLNFPEEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDA-----ELRLENRMVENL 144

Query: 133 DLNQFPE 137
           D+N+ PE
Sbjct: 145 DMNKLPE 146

[Close]

BLAST of Csor.00g167460 vs. ExPASy Swiss-Prot
Match: Q9FH94 (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.2e-33
Identity = 84/167 (50.30%), Postives = 104/167 (62.28%), Query Frame = 0


Query: 17  TGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSAR 76
           T ++++PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+AR
Sbjct: 14  TRKRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTAR 73

Query: 77  LNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDA-------------AANRTS----- 136
           LNFP+L L        D+S ++IRK+A EVGA+VDA               NR S     
Sbjct: 74  LNFPEL-LPGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQNRDSDVDNK 133

Query: 137 ----------------------LRQSKPISEKPDLNQFPEPESSDED 144
                                 LR    + ++ DLN+ P+PESSDE+
Sbjct: 134 NFHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEE 179

[Close]

BLAST of Csor.00g167460 vs. ExPASy Swiss-Prot
Match: O22174 (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.8e-33
Identity = 85/146 (58.22%), Postives = 102/146 (69.86%), Query Frame = 0


Query: 19  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLN 78
           R  KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSARLN
Sbjct: 23  RDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLN 82

Query: 79  FPDLI----LQDMDHQLLDVSPSSIRKRAIEVGARVDA----------AANR------TS 138
           FP+L+    + +   +  D+S + IR++A EVGA+VDA            NR       +
Sbjct: 83  FPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYEKIEN 142

Query: 139 LRQSKPIS-EKPDLNQFPEPESSDED 144
            R+S   S E+ DLN+ P+PE+SD D
Sbjct: 143 CRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of Csor.00g167460 vs. ExPASy Swiss-Prot
Match: Q9SNE1 (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.2e-33
Identity = 77/137 (56.20%), Postives = 98/137 (71.53%), Query Frame = 0


Query: 19  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLN 78
           ++E+P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 79  FPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA--------NRTSLRQSKP----IS 138
           FP+L+         D+S ++IRK+A EVGA+VDA           R    Q +     + 
Sbjct: 76  FPELLPCTSAE---DMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGGLL 135

Query: 139 EKPDLNQFPEPESSDED 144
           E  DLN+ P+PE+ D+D
Sbjct: 136 ELVDLNKLPDPENLDDD 149

[Close]

BLAST of Csor.00g167460 vs. NCBI nr
Match: XP_022962377.1 (ethylene-responsive transcription factor RAP2-1-like [Cucurbita moschata] >XP_023545716.1 ethylene-responsive transcription factor RAP2-1-like [Cucurbita pepo subsp. pepo] >KAG6598357.1 Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285 bits (730), Expect = 5.13e-97
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60
           MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120

Query: 121 QSKPISEKPDLNQFPEPESSDEDC 144
           QSKPISEKPDLNQFPEPESSDEDC
Sbjct: 121 QSKPISEKPDLNQFPEPESSDEDC 144

[Close]

BLAST of Csor.00g167460 vs. NCBI nr
Match: XP_022997304.1 (ethylene-responsive transcription factor RAP2-1-like [Cucurbita maxima])

HSP 1 Score: 284 bits (727), Expect = 1.47e-96
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60
           MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIR+RAIEVGARVDAAANRTSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRRRAIEVGARVDAAANRTSLR 120

Query: 121 QSKPISEKPDLNQFPEPESSDEDC 144
           QSKPISEKPDLNQFPEPESSDEDC
Sbjct: 121 QSKPISEKPDLNQFPEPESSDEDC 144

[Close]

BLAST of Csor.00g167460 vs. NCBI nr
Match: KAG7029328.1 (Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285 bits (730), Expect = 1.01e-95
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60
           MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 88  MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 147

Query: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR
Sbjct: 148 RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 207

Query: 121 QSKPISEKPDLNQFPEPESSDEDC 144
           QSKPISEKPDLNQFPEPESSDEDC
Sbjct: 208 QSKPISEKPDLNQFPEPESSDEDC 231

[Close]

BLAST of Csor.00g167460 vs. NCBI nr
Match: XP_038884237.1 (ethylene-responsive transcription factor RAP2-1-like [Benincasa hispida])

HSP 1 Score: 265 bits (677), Expect = 6.01e-89
Identity = 133/143 (93.01%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60
           ME++ ++TIPEKRKQ TGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEESVETTIPEKRKQQTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA++TSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 120

Query: 121 QSKPISEKPDLNQFPEPESSDED 143
           QSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 QSKPISDKPDLNQFPDPESSDED 143

[Close]

BLAST of Csor.00g167460 vs. NCBI nr
Match: XP_008444599.1 (PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo] >KAA0060919.1 ethylene-responsive transcription factor RAP2-1 [Cucumis melo var. makuwa])

HSP 1 Score: 261 bits (666), Expect = 2.76e-87
Identity = 133/143 (93.01%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60
           ME++ D+TIPEKRKQ +GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEESVDTTIPEKRKQ-SGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA++TSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 120

Query: 121 QSKPISEKPDLNQFPEPESSDED 143
           QSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 QSKPISDKPDLNQFPDPESSDED 142

[Close]

BLAST of Csor.00g167460 vs. ExPASy TrEMBL
Match: A0A6J1HCJ9 (ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita moschata OX=3662 GN=LOC111462838 PE=4 SV=1)

HSP 1 Score: 285 bits (730), Expect = 2.49e-97
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60
           MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120

Query: 121 QSKPISEKPDLNQFPEPESSDEDC 144
           QSKPISEKPDLNQFPEPESSDEDC
Sbjct: 121 QSKPISEKPDLNQFPEPESSDEDC 144

[Close]

BLAST of Csor.00g167460 vs. ExPASy TrEMBL
Match: A0A6J1KB24 (ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111492253 PE=4 SV=1)

HSP 1 Score: 284 bits (727), Expect = 7.13e-97
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60
           MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIR+RAIEVGARVDAAANRTSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRRRAIEVGARVDAAANRTSLR 120

Query: 121 QSKPISEKPDLNQFPEPESSDEDC 144
           QSKPISEKPDLNQFPEPESSDEDC
Sbjct: 121 QSKPISEKPDLNQFPEPESSDEDC 144

[Close]

BLAST of Csor.00g167460 vs. ExPASy TrEMBL
Match: A0A5A7V5C8 (Ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00520 PE=4 SV=1)

HSP 1 Score: 261 bits (666), Expect = 1.34e-87
Identity = 133/143 (93.01%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60
           ME++ D+TIPEKRKQ +GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEESVDTTIPEKRKQ-SGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA++TSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 120

Query: 121 QSKPISEKPDLNQFPEPESSDED 143
           QSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 QSKPISDKPDLNQFPDPESSDED 142

[Close]

BLAST of Csor.00g167460 vs. ExPASy TrEMBL
Match: A0A1S3BAR1 (ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo OX=3656 GN=LOC103487870 PE=4 SV=1)

HSP 1 Score: 261 bits (666), Expect = 1.34e-87
Identity = 133/143 (93.01%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60
           ME++ D+TIPEKRKQ +GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEESVDTTIPEKRKQ-SGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA++TSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 120

Query: 121 QSKPISEKPDLNQFPEPESSDED 143
           QSKPIS+KPDLNQFP+PESSDED
Sbjct: 121 QSKPISDKPDLNQFPDPESSDED 142

[Close]

BLAST of Csor.00g167460 vs. ExPASy TrEMBL
Match: A0A0A0LR87 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356600 PE=4 SV=1)

HSP 1 Score: 256 bits (655), Expect = 6.37e-86
Identity = 131/143 (91.61%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MEQTRDSTIPEKRKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60
           ME++ ++TIPEKRKQ +GRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA
Sbjct: 1   MEESVETTIPEKRKQ-SGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAA 60

Query: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLR 120
           RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA++TSLR
Sbjct: 61  RAYDTAVFYLRGPSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLR 120

Query: 121 QSKPISEKPDLNQFPEPESSDED 143
           QSKPIS+KPDLNQFP+PESS ED
Sbjct: 121 QSKPISDKPDLNQFPDPESSGED 142

[Close]

BLAST of Csor.00g167460 vs. TAIR 10
Match: AT1G46768.1 (related to AP2 1 )

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-39
Identity = 89/149 (59.73%), Postives = 105/149 (70.47%), Query Frame = 0


Query: 1   MEQTRDSTIPEKRKQLTGRQ-------EKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSY 60
           ME+ ++ +   KR+Q    +        KPYRGIR RKWGKWVAEIREPNKRSR+WLGSY
Sbjct: 1   MEREQEESTMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSY 60

Query: 61  TTPLAAARAYDTAVFYLRGPSARLNFPDLILQDMDH----QLLDVSPSSIRKRAIEVGAR 120
           TT +AAARAYD AVFYLRGPSARLNFPDL+LQ+ DH       D+  + IR++A EVGAR
Sbjct: 61  TTDIAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGAR 120

Query: 121 VDA--AANRTSLRQSKPISEKPDLNQFPE 137
           VDA  A+   S+  S P   KPDLNQ PE
Sbjct: 121 VDALLASAAPSMAHSTPPVIKPDLNQIPE 149

[Close]

BLAST of Csor.00g167460 vs. TAIR 10
Match: AT4G06746.1 (related to AP2 9 )

HSP 1 Score: 145.6 bits (366), Expect = 3.1e-35
Identity = 79/127 (62.20%), Postives = 93/127 (73.23%), Query Frame = 0


Query: 13  RKQLTGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRG 72
           ++ L    EK Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T +AAARAYDTAVFYLRG
Sbjct: 25  KRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRG 84

Query: 73  PSARLNFPDLILQD---MDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLRQSKPISEKP 132
           PSARLNFP+ + +D    +    D+SP+ IRK+A EVGARVDA      LR    + E  
Sbjct: 85  PSARLNFPEEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDA-----ELRLENRMVENL 144

Query: 133 DLNQFPE 137
           D+N+ PE
Sbjct: 145 DMNKLPE 146

[Close]

BLAST of Csor.00g167460 vs. TAIR 10
Match: AT5G67190.1 (DREB and EAR motif protein 2 )

HSP 1 Score: 143.3 bits (360), Expect = 1.5e-34
Identity = 84/167 (50.30%), Postives = 104/167 (62.28%), Query Frame = 0


Query: 17  TGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSAR 76
           T ++++PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+AR
Sbjct: 14  TRKRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTAR 73

Query: 77  LNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDA-------------AANRTS----- 136
           LNFP+L L        D+S ++IRK+A EVGA+VDA               NR S     
Sbjct: 74  LNFPEL-LPGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQNRDSDVDNK 133

Query: 137 ----------------------LRQSKPISEKPDLNQFPEPESSDED 144
                                 LR    + ++ DLN+ P+PESSDE+
Sbjct: 134 NFHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEE 179

[Close]

BLAST of Csor.00g167460 vs. TAIR 10
Match: AT2G23340.1 (DREB and EAR motif protein 3 )

HSP 1 Score: 142.1 bits (357), Expect = 3.4e-34
Identity = 85/146 (58.22%), Postives = 102/146 (69.86%), Query Frame = 0


Query: 19  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLN 78
           R  KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSARLN
Sbjct: 23  RDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLN 82

Query: 79  FPDLI----LQDMDHQLLDVSPSSIRKRAIEVGARVDA----------AANR------TS 138
           FP+L+    + +   +  D+S + IR++A EVGA+VDA            NR       +
Sbjct: 83  FPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYEKIEN 142

Query: 139 LRQSKPIS-EKPDLNQFPEPESSDED 144
            R+S   S E+ DLN+ P+PE+SD D
Sbjct: 143 CRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of Csor.00g167460 vs. TAIR 10
Match: AT3G50260.1 (cooperatively regulated by ethylene and jasmonate 1 )

HSP 1 Score: 141.4 bits (355), Expect = 5.9e-34
Identity = 77/137 (56.20%), Postives = 98/137 (71.53%), Query Frame = 0


Query: 19  RQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLN 78
           ++E+P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 79  FPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAA--------NRTSLRQSKP----IS 138
           FP+L+         D+S ++IRK+A EVGA+VDA           R    Q +     + 
Sbjct: 76  FPELLPCTSAE---DMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGGLL 135

Query: 139 EKPDLNQFPEPESSDED 144
           E  DLN+ P+PE+ D+D
Sbjct: 136 ELVDLNKLPDPENLDDD 149

The following BLAST results are available for this feature:

BLAST of Csor.00g167460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC30	1.7e-38	59.73	Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8W3M3	4.4e-34	62.20	Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH94	2.2e-33	50.30	Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 ...	[more]
O22174	4.8e-33	58.22	Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SNE1	8.2e-33	56.20	Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Csor.00g167460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962377.1	5.13e-97	100.00	ethylene-responsive transcription factor RAP2-1-like [Cucurbita moschata] >XP_02...	[more]
XP_022997304.1	1.47e-96	99.31	ethylene-responsive transcription factor RAP2-1-like [Cucurbita maxima]	[more]
KAG7029328.1	1.01e-95	100.00	Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma...	[more]
XP_038884237.1	6.01e-89	93.01	ethylene-responsive transcription factor RAP2-1-like [Benincasa hispida]	[more]
XP_008444599.1	2.76e-87	93.01	PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo] >KAA00...	[more]

BLAST of Csor.00g167460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCJ9	2.49e-97	100.00	ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KB24	7.13e-97	99.31	ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita maxima OX=3661...	[more]
A0A5A7V5C8	1.34e-87	93.01	Ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BAR1	1.34e-87	93.01	ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LR87	6.37e-86	91.61	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356600 PE=...	[more]

BLAST of Csor.00g167460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G46768.1	1.2e-39	59.73	related to AP2 1	[more]
AT4G06746.1	3.1e-35	62.20	related to AP2 9	[more]
AT5G67190.1	1.5e-34	50.30	DREB and EAR motif protein 2	[more]
AT2G23340.1	3.4e-34	58.22	DREB and EAR motif protein 3	[more]
AT3G50260.1	5.9e-34	56.20	cooperatively regulated by ethylene and jasmonate 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 24..35 score: 64.24 coord: 62..82 score: 52.99
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 23..86 e-value: 6.8E-35 score: 131.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 24..72 e-value: 1.3E-11 score: 44.5
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 23..80 score: 22.207401
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 24..82 e-value: 3.46429E-28 score: 96.957
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 23..81 e-value: 1.2E-24 score: 88.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31729:SF2	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 8..141
None	No IPR available	PANTHER	PTHR31729	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 8..141
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 23..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g167460.m01	Csor.00g167460.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity