Csor.00g166730 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTCTCTGACTCACTTGGGTATGGCAACCGGCGCGACCACGCAACCAGTAGGGTTCCATGCGACAGAGCTTTTATTTGGGCCGAAATTCGTCTAAAGAGGCCCATATTTTAGTTGGGCCTGAAATTTTGTCTAATTTAAAATTTTAAATGAAAATAGCCCATAGGTATTTATGACGGCCCAACTTTGCTCATTTTTTTCCACCGCTACCCCACATGGTACTAACATATAAATTTGAAATTCAATTAAACACAAAATTTAAAATTATATTTGAGAGATCTTTTAAAATGTTAGATAAAATATTTGAAATATATTTTTTAATACATTTATTAAAGTTTTAGTCAGAAAAAATAAATGATTTAAATTCCCGATCTCTTGGCCTAAAATACATTATTAACAACAATTTAGCGGTATATAAATAAATAATAATAATAACTATGGTTAATACATGCTTTAAATATATATATATATATATATTTTTTTTTTTTTTTTTTGTTGGTTTAAAATATATATATTTTTAAAAGTTAAAATGAAAATTTAAAAAGGCTCTAAGTTAGAATTATTTTTTATTATGATTAACAAGTAGGCCATCAAATAATCTCTTGTCCCTTATAATTTGAGCTTTAAATTAAATAATAAGAAAAGGAACTCCAAAAACAAAAAAAAATAAATAATATTATTAAATTATTATAAAACCGGCCACATAATCATAATTAAAAGTAAAAAAAAAAAAAAGAATAAGAAGAAGATTCATTTCCGTTTGATTCGGTCACCGGCGAACGTGGAAGCCACGTGGACAACCATAGATGGTGGGTCCACGGAGGTCTGATTGTAGCCGATTCTCGAACGCATCACGTTTCCGAGAAAGAAAAGGAAGCGATACATTTTTTTAAAATCCCATTAGAAGCGCATCAGAAGAACAAACCAATCCAGAGGAGAGGAAGACCCATAGATAGAGATAGGCGGCGGAATAGACGGGGATTCGGCGGAGCCGCGAGGAGAGATTCCCTTTCCCTTGCGGTTAACCAGAACGGTTTCGATTATATATATGTTTATTTCACTTAACTTCTGCCAAGAAACTGCGATTTAGACTGCCCTTCTCCCGTCGTCACTTAGTCAAACCACGAGTACGTTCTTTCTTCAACTTGTTCTGTATTAGGTTTTCTCTTTTCGATGTATTTCCTTGTTTTAATACGTTGTTCGTGGTGGATTTTTGGTATTTTGTAGTCTCGATTTGTAAATCTCTATGGTAACTGGCCGATTTGTTTTCATCGAACTCTTGATCTGGTGTAGAAGCGGATTCTTGTTCTGATTTGATCTGTATTAGGTCGCGGCAGTTTTTTTTTTCACTGAATCTCTTGTAATTGAATATTTCCTTACGATTACGATGATCGAATCCTGATATGAGGGATTGGTATCTTTTTGATAGATTGATGGGGGAATTATTACATCTGAACGGGCTTTGAATATATTTGGTCTGCAGGCTCAGCTTCATTGTTCCTGTGGATGTATCTTGTCGTCATTCAAGAAGAAGATTGGCTTGTGAATTGGCCCGATTCCTTTCTGGGTATTCTCAGGCCGCCTTGTCTGTCTGTTGAGAGAAAGGCCTTCTCACATTGTGTTTCAAGGGATAGATGGGATAAAGAATTCTTCAAGCTTCAGAGCGGATAA ATGTTCTCTCTGACTCACTTGGGTATGGCAACCGGCGCGACCACGCAACCAACTGCCCTTCTCCCGTCGTCACTTAGTCAAACCACGAGCTCAGCTTCATTGTTCCTGTGGATGTATCTTGTCGTCATTCAAGAAGAAGATTGGCTTGTGAATTGGCCCGATTCCTTTCTGGGTATTCTCAGGCCGCCTTGTCTGTCTGTTGAGAGAAAGGCCTTCTCACATTGTGTTTCAAGGGATAGATGGGATAAAGAATTCTTCAAGCTTCAGAGCGGATAA ATGTTCTCTCTGACTCACTTGGGTATGGCAACCGGCGCGACCACGCAACCAACTGCCCTTCTCCCGTCGTCACTTAGTCAAACCACGAGCTCAGCTTCATTGTTCCTGTGGATGTATCTTGTCGTCATTCAAGAAGAAGATTGGCTTGTGAATTGGCCCGATTCCTTTCTGGGTATTCTCAGGCCGCCTTGTCTGTCTGTTGAGAGAAAGGCCTTCTCACATTGTGTTTCAAGGGATAGATGGGATAAAGAATTCTTCAAGCTTCAGAGCGGATAA MFSLTHLGMATGATTQPTALLPSSLSQTTSSASLFLWMYLVVIQEEDWLVNWPDSFLGILRPPCLSVERKAFSHCVSRDRWDKEFFKLQSG Homology
BLAST of Csor.00g166730 vs. NCBI nr
Match: KAG6598285.1 (hypothetical protein SDJN03_08063, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 189 bits (479), Expect = 1.99e-60 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Csor.00g166730 vs. NCBI nr
Match: EXB66844.1 (hypothetical protein L484_019481 [Morus notabilis]) HSP 1 Score: 67.4 bits (163), Expect = 9.79e-12 Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of Csor.00g166730 vs. NCBI nr
Match: MBA0835792.1 (hypothetical protein [Gossypium armourianum]) HSP 1 Score: 64.3 bits (155), Expect = 1.46e-09 Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of Csor.00g166730 vs. NCBI nr
Match: KAA3490539.1 (IQ domain-containing protein IQM1-like [Gossypium australe]) HSP 1 Score: 58.5 bits (140), Expect = 1.88e-08 Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of Csor.00g166730 vs. NCBI nr
Match: KAG8491336.1 (hypothetical protein CXB51_014496 [Gossypium anomalum]) HSP 1 Score: 58.2 bits (139), Expect = 2.20e-07 Identity = 30/54 (55.56%), Postives = 36/54 (66.67%), Query Frame = 0
BLAST of Csor.00g166730 vs. ExPASy TrEMBL
Match: W9RE16 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_019481 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 4.74e-12 Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of Csor.00g166730 vs. ExPASy TrEMBL
Match: A0A7J9JNP8 (Uncharacterized protein (Fragment) OS=Gossypium armourianum OX=34283 GN=Goarm_008051 PE=3 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 7.06e-10 Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of Csor.00g166730 vs. ExPASy TrEMBL
Match: A0A5B6X8U1 (IQ domain-containing protein IQM1-like OS=Gossypium australe OX=47621 GN=EPI10_033993 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 9.12e-09 Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of Csor.00g166730 vs. ExPASy TrEMBL
Match: A0A7J6E2G2 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_007349 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.97e-07 Identity = 27/44 (61.36%), Postives = 32/44 (72.73%), Query Frame = 0
BLAST of Csor.00g166730 vs. ExPASy TrEMBL
Match: A0A0B0P6Y9 (Graves disease carrier OS=Gossypium arboreum OX=29729 GN=F383_30216 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.29e-06 Identity = 29/54 (53.70%), Postives = 35/54 (64.81%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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