Csor.00g166630 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g166630
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr05: 343051 .. 345351 (+)
RNA-Seq ExpressionCsor.00g166630
SyntenyCsor.00g166630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGTAATGTAAATTTAGGTGCCTTTTCTAGAATTTTTTTGACATAATCTTTCTGGTTCTGGCGCATTTTAAAATAATCATTTAGATCTGTCTATTTCTGTTTTGCATCCGTTTGAAGAGAATGCCAACGTTTTAAAATGAAACAAATGCAGATTTTCAATTGTGAATCATGTTACCTTGGGCAATTCTGTATTTCAGTCCTTTGATGGGTTGGAAGAAGAAAGGCATGATTTGGAAGGAACTTCAACTGTTCTTACATTATTTTGGTAAGCAAGGATTAATTTGGCTGTGATGGAGGTTTTCTGTTAGTATTTTGATATGTCTACTCAAGTAGAAGGAAATAGATGTGTATAAACTGATTATCGCACATTATCTTAACCTCAAGGAGGTAGGCTTAGTTCAAGTTTCGTTCATTCTCCTTAAGCGCAATGAGATTTACCCGTGCTCATTCATGTTCATTGTGCTTGTTTAAGAACAACTTTGGCTAGTCTTATTTCTGAAGTGCACCTAGTGGATGGGATTATCATACGATAACTTGCATTCACATAGTGGACAATGGACTGTCTAAGTACTTACTGGCATTTCAAGCACTGCTCAAATAGTAGCCTTTTATATGCATTACTAATTTCATCGTTGTTCCTCACTGAGATTGTTGCGGATAATCACCTTTTTCTTCTGGAGGGATATGAATTGTGAATTTTAAGATTATGTGCACAGTTGTCTGGATCTTCTTGCTGAAATTTAGCTCTTCACTTCATTTACAGATGTAGTTTATTAAGTGTTTTCTTTGCTTCTGCGTGTCTTATTGCTATTGTTCTTCAAGTAGGGGGTTCTCACCTCATTGGAGTCTCGCACTTGTTGGATAATGGCTTTGGATGTTTCCCTTGGTAAACATATTGTTTGGCATAAAGTAAGTACACTCAAATATGGTGTTCTTTTCAGGAGGTTTGTGGGCTCATCGTTTTTCCAGCAAAGCAGTTAAAGGTCCTGAGAAAATTGAAATGGTAAAAACAGTAGATGTTGGAAGATGTTGCAGGGCCCATGGCGTTTCCAAGAGGCTGTATCACATCCCAAATAGCAAAAGCCACTGCATGAACGATGTTTGAATTTTCTCCCAGTCCTCGTAGCATCCAATCCTAGAAGGAACCAAAATCATGAATCTTTGTAACAGCCCAAGCCCATCTGTCCTCTTTCTGTCCTCTTTGGGTTTTTCCCGTCGGATTTTAAAATACGTTTGCTAGGGAGAGGTTTTCACACCCTTATAAAGAATGTTTCGTTCTCCTCTCCAACTGATGTGGGATCTTACAGCCCACCCCTCTTTGGGGTCTAGCATCCTCGTTGGTACTCGTTCTCTTCTTCAATCGATGTGGGACCTCCCAATCCACCCCTTGGTCCGGCGTCTTTGTTGGCACACTGCCTTATGTCCATCACCCTTAGGGGCTCAACTTCCTCGCTAGCACAGCCCTCAATGTCTAGCTCTGATACCATTTGTAACGACCCAAGTCTACTGCTAGCAGATATTATTCTCTTTGGTCTTTTCCTTTTCGGTTTCCCCTCGAGGCTTTTAAAACACTTTTACTAGGGAGAGGTTTCCATACGCTTATAAAGAATGCTTCTTTCTCCTCTCCAACCGATGTGTGATCTCACACTTTCCCTCTCAAATATTTTTGCTGGGTCATACCTAACTCATTGGCTTTGGACTTTGAACATTTCTGGCGCTTTGGCCTACATATCTCTGTCTAGGTCTTCCCAAGGGCAGCAATGTTATTTCTGTTATGGGGTTCCTGTTGGCAGTACCCGGAAAAAGAACCTCTCAAAAATTGGTGGGGAACAGTTTTTTTTTTCTTTTTTCGGTTGCTTCTTGGTTTGAAGGCTAAGCTGCTATCATCTCCTTGGTTACACAACTATAGCTCTTACACTAATTTGCAGTGGGGTGGCTCTCAAGTTAGCGTTAGAACATAGTGAAGGGAATTTTATTCAGATGTCCCTATATCATTATTATTTGCATCCATGAGCTTTTAAAAATTCAAATTTAGGCAAGCATGTCTCCAGTTACCTGTTAACATCAGTAGCTTTCCATATGATTGTTCTGACTTCTTCCTTGCATATTCATTGACAGGGAAGCATGATGTTATGCCTGTCTCACACCTGATCCATCCCCCAATCATCATTTCACAGGTCAAAATCATGCCATTGGTGCTCACAACTGATCAATCATCATCGAGTCATTCCAGTGATGATGGGGATAGCGTTCTTCGTCAGCCGGCACTCTGCAAAACCCTCTGGCTGCTGCTTTAG

mRNA sequence

ATGCAGATTTTCAATTGTGAATCATGTTACCTTGGGCAATTCTGGAAGCATGATGTTATGCCTGTCTCACACCTGATCCATCCCCCAATCATCATTTCACAGGTCAAAATCATGCCATTGGTGCTCACAACTGATCAATCATCATCGAGTCATTCCAGTGATGATGGGGATAGCGTTCTTCGTCAGCCGGCACTCTGCAAAACCCTCTGGCTGCTGCTTTAG

Coding sequence (CDS)

ATGCAGATTTTCAATTGTGAATCATGTTACCTTGGGCAATTCTGGAAGCATGATGTTATGCCTGTCTCACACCTGATCCATCCCCCAATCATCATTTCACAGGTCAAAATCATGCCATTGGTGCTCACAACTGATCAATCATCATCGAGTCATTCCAGTGATGATGGGGATAGCGTTCTTCGTCAGCCGGCACTCTGCAAAACCCTCTGGCTGCTGCTTTAG

Protein sequence

MQIFNCESCYLGQFWKHDVMPVSHLIHPPIIISQVKIMPLVLTTDQSSSSHSSDDGDSVLRQPALCKTLWLLL
Homology
[Close]
BLAST of Csor.00g166630 vs. NCBI nr
Match: KAG6598275.1 (hypothetical protein SDJN03_08053, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 158 bits (399), Expect = 8.84e-49
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MQIFNCESCYLGQFWKHDVMPVSHLIHPPIIISQVKIMPLVLTTDQSSSSHSSDDGDSVL 60
          MQIFNCESCYLGQFWKHDVMPVSHLIHPPIIISQVKIMPLVLTTDQSSSSHSSDDGDSVL
Sbjct: 1  MQIFNCESCYLGQFWKHDVMPVSHLIHPPIIISQVKIMPLVLTTDQSSSSHSSDDGDSVL 60

Query: 61 RQPALCKTLWLLL 73
          RQPALCKTLWLLL
Sbjct: 61 RQPALCKTLWLLL 73

The following BLAST results are available for this feature:
BLAST of Csor.00g166630 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g166630 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6598275.18.84e-49100.00hypothetical protein SDJN03_08053, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g166630 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g166630 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g166630.m01Csor.00g166630.m01mRNA